AlfalfaGEDB | Msa1427160

M. sativa cultivar zhongmu-4 / Msa1427160

KEGG: -
GO: -
PFAM: PF07019.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427160	XP_003597363.1	99.194	124	1	0	1	124	1	124	5.34e-82	246

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427160	sp\|Q9CQT9\|RCAF1_MOUSE	37.097	124	77	1	2	124	5	128	2.60e-25	95.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427160	B7FMT6	99.194	124	1	0	1	124	1	124	2.55e-82	246

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016540	Msa1427160	0.825723	4.013132e-54	-8.615850e-47
Msa0029630	Msa1427160	0.813671	2.274771e-51	-8.615850e-47
Msa0032020	Msa1427160	0.811074	8.397303e-51	-8.615850e-47
Msa0033880	Msa1427160	0.821020	5.041169e-53	-8.615850e-47
Msa0041690	Msa1427160	0.814241	1.702697e-51	-8.615850e-47
Msa0077900	Msa1427160	0.801478	8.835209e-49	-8.615850e-47
Msa0079920	Msa1427160	0.801659	8.111660e-49	-8.615850e-47
Msa1351540	Msa1427160	0.800698	1.275552e-48	-8.615850e-47
Msa1356610	Msa1427160	0.829963	3.835125e-55	-8.615850e-47
Msa1373170	Msa1427160	0.840869	6.705473e-58	-8.615850e-47
Msa1373820	Msa1427160	0.804925	1.709167e-49	-8.615850e-47
Msa1391480	Msa1427160	0.816813	4.556504e-52	-8.615850e-47
Msa1398790	Msa1427160	0.811623	6.381863e-51	-8.615850e-47
Msa1403570	Msa1427160	0.852787	3.670278e-61	-8.615850e-47
Msa1410440	Msa1427160	0.802406	5.695047e-49	-8.615850e-47
Msa1411500	Msa1427160	0.821360	4.208687e-53	-8.615850e-47
Msa1411950	Msa1427160	0.809502	1.833156e-50	-8.615850e-47
Msa1427160	Msa1432480	0.822244	2.627633e-53	-8.615850e-47
Msa1427160	Msa1443300	0.824864	6.407204e-54	-8.615850e-47
Msa1427160	Msa1459910	0.845928	2.990054e-59	-8.615850e-47
Msa1427160	Msa1459960	0.855567	5.786272e-62	-8.615850e-47
Msa0615580	Msa1427160	0.808658	2.779233e-50	-8.615850e-47
Msa0644030	Msa1427160	0.850154	2.040406e-60	-8.615850e-47
Msa0656810	Msa1427160	0.818576	1.823440e-52	-8.615850e-47
Msa0658480	Msa1427160	0.802133	6.483489e-49	-8.615850e-47
Msa0666230	Msa1427160	0.809201	2.127015e-50	-8.615850e-47
Msa0669180	Msa1427160	0.813574	2.389340e-51	-8.615850e-47
Msa0687230	Msa1427160	0.805584	1.244042e-49	-8.615850e-47
Msa0687870	Msa1427160	0.828714	7.711135e-55	-8.615850e-47
Msa0744100	Msa1427160	0.813730	2.207526e-51	-8.615850e-47
Msa0785130	Msa1427160	0.815677	8.177591e-52	-8.615850e-47
Msa0788120	Msa1427160	0.816011	6.889483e-52	-8.615850e-47
Msa0790400	Msa1427160	0.828573	8.340881e-55	-8.615850e-47
Msa0819540	Msa1427160	0.807142	5.840418e-50	-8.615850e-47
Msa0825270	Msa1427160	0.829213	5.838789e-55	-8.615850e-47
Msa0826510	Msa1427160	0.847272	1.284401e-59	-8.615850e-47
Msa0123510	Msa1427160	0.803865	2.842971e-49	-8.615850e-47
Msa0125450	Msa1427160	0.809848	1.544400e-50	-8.615850e-47
Msa0126840	Msa1427160	0.830783	2.417501e-55	-8.615850e-47
Msa0126880	Msa1427160	0.831758	1.392138e-55	-8.615850e-47
Msa0127040	Msa1427160	0.807471	4.974765e-50	-8.615850e-47
Msa0127850	Msa1427160	0.824108	9.649582e-54	-8.615850e-47
Msa0136120	Msa1427160	0.803328	3.673366e-49	-8.615850e-47
Msa0138360	Msa1427160	0.802180	6.341193e-49	-8.615850e-47
Msa0142110	Msa1427160	0.814553	1.453321e-51	-8.615850e-47
Msa0142410	Msa1427160	0.818178	2.244110e-52	-8.615850e-47
Msa0146080	Msa1427160	0.804091	2.550611e-49	-8.615850e-47
Msa0147980	Msa1427160	0.820034	8.490033e-53	-8.615850e-47
Msa0166750	Msa1427160	0.804808	1.808255e-49	-8.615850e-47
Msa0167480	Msa1427160	0.813396	2.614107e-51	-8.615850e-47
Msa0168090	Msa1427160	0.821876	3.197415e-53	-8.615850e-47
Msa0169610	Msa1427160	0.806801	6.896726e-50	-8.615850e-47
Msa0171940	Msa1427160	0.801792	7.618936e-49	-8.615850e-47
Msa0174000	Msa1427160	0.828520	8.589917e-55	-8.615850e-47
Msa0178120	Msa1427160	0.832453	9.371367e-56	-8.615850e-47
Msa0188690	Msa1427160	0.834840	2.375108e-56	-8.615850e-47
Msa0221030	Msa1427160	0.810304	1.231790e-50	-8.615850e-47
Msa0223170	Msa1427160	0.995314	4.808614e-215	-8.615850e-47
Msa0231100	Msa1427160	0.805202	1.495617e-49	-8.615850e-47
Msa0236620	Msa1427160	0.815683	8.155263e-52	-8.615850e-47
Msa1227690	Msa1427160	0.825680	4.108083e-54	-8.615850e-47
Msa1255410	Msa1427160	0.811469	6.892750e-51	-8.615850e-47
Msa1266060	Msa1427160	0.805265	1.450887e-49	-8.615850e-47
Msa1270620	Msa1427160	0.815404	9.407374e-52	-8.615850e-47
Msa1270690	Msa1427160	0.803937	2.746978e-49	-8.615850e-47
Msa1276970	Msa1427160	0.811667	6.242546e-51	-8.615850e-47
Msa1290450	Msa1427160	0.815943	7.134566e-52	-8.615850e-47
Msa1294840	Msa1427160	0.819073	1.406527e-52	-8.615850e-47
Msa1329300	Msa1427160	0.803903	2.791845e-49	-8.615850e-47
Msa1331250	Msa1427160	0.810276	1.249199e-50	-8.615850e-47
Msa1333560	Msa1427160	0.801743	7.796702e-49	-8.615850e-47
Msa1343290	Msa1427160	0.805230	1.475770e-49	-8.615850e-47
Msa1344310	Msa1427160	0.827060	1.926894e-54	-8.615850e-47
Msa0384670	Msa1427160	0.834616	2.704468e-56	-8.615850e-47
Msa0423750	Msa1427160	0.815005	1.153901e-51	-8.615850e-47
Msa0434570	Msa1427160	0.816202	6.243402e-52	-8.615850e-47
Msa0434770	Msa1427160	0.820661	6.096637e-53	-8.615850e-47
Msa0436200	Msa1427160	0.806544	7.814428e-50	-8.615850e-47
Msa0443390	Msa1427160	0.824185	9.256931e-54	-8.615850e-47
Msa0474700	Msa1427160	0.804435	2.162960e-49	-8.615850e-47
Msa0478580	Msa1427160	0.834000	3.859398e-56	-8.615850e-47
Msa0981430	Msa1427160	0.805656	1.201624e-49	-8.615850e-47
Msa1019240	Msa1427160	0.821919	3.125249e-53	-8.615850e-47
Msa1019260	Msa1427160	0.819928	8.976619e-53	-8.615850e-47
Msa1030080	Msa1427160	0.827232	1.752403e-54	-8.615850e-47
Msa1070390	Msa1427160	0.838007	3.712442e-57	-8.615850e-47
Msa1083880	Msa1427160	0.809231	2.095907e-50	-8.615850e-47
Msa1104210	Msa1427160	0.800540	1.373984e-48	-8.615850e-47
Msa0241830	Msa1427160	0.821546	3.811619e-53	-8.615850e-47
Msa0244980	Msa1427160	0.804210	2.409951e-49	-8.615850e-47
Msa0245580	Msa1427160	0.839073	1.970667e-57	-8.615850e-47
Msa0262480	Msa1427160	0.844266	8.410984e-59	-8.615850e-47
Msa0264440	Msa1427160	0.887576	1.264114e-72	-8.615850e-47
Msa0270210	Msa1427160	0.859946	2.908893e-63	-8.615850e-47
Msa0291520	Msa1427160	0.800015	1.757407e-48	-8.615850e-47
Msa0296250	Msa1427160	0.818802	1.620786e-52	-8.615850e-47
Msa0300350	Msa1427160	0.842837	2.025537e-58	-8.615850e-47
Msa0307850	Msa1427160	0.826661	2.400223e-54	-8.615850e-47
Msa0322900	Msa1427160	0.808840	2.541899e-50	-8.615850e-47
Msa0339690	Msa1427160	0.946828	2.186307e-105	-8.615850e-47
Msa0363060	Msa1427160	0.808279	3.348300e-50	-8.615850e-47
Msa1123350	Msa1427160	0.854644	1.073307e-61	-8.615850e-47
Msa1126830	Msa1427160	0.815568	8.650293e-52	-8.615850e-47
Msa1127540	Msa1427160	0.835385	1.730422e-56	-8.615850e-47
Msa1127590	Msa1427160	0.821221	4.530031e-53	-8.615850e-47
Msa1131560	Msa1427160	0.831938	1.256699e-55	-8.615850e-47
Msa1133540	Msa1427160	0.800693	1.278347e-48	-8.615850e-47
Msa1145240	Msa1427160	0.811826	5.765436e-51	-8.615850e-47
Msa1158230	Msa1427160	0.808764	2.638251e-50	-8.615850e-47
Msa1165780	Msa1427160	0.830880	2.288709e-55	-8.615850e-47
Msa1166870	Msa1427160	0.818669	1.736999e-52	-8.615850e-47
Msa1169080	Msa1427160	0.801018	1.097228e-48	-8.615850e-47
Msa1179980	Msa1427160	0.803026	4.243170e-49	-8.615850e-47
Msa1194230	Msa1427160	0.819483	1.134100e-52	-8.615850e-47
Msa1201830	Msa1427160	0.818884	1.552435e-52	-8.615850e-47
Msa1206650	Msa1427160	0.818410	1.988736e-52	-8.615850e-47
Msa1208020	Msa1427160	0.817920	2.567410e-52	-8.615850e-47
Msa0511770	Msa1427160	0.811677	6.211864e-51	-8.615850e-47
Msa0518030	Msa1427160	0.825184	5.384252e-54	-8.615850e-47
Msa0534750	Msa1427160	0.812469	4.173103e-51	-8.615850e-47
Msa0542470	Msa1427160	0.808055	3.737492e-50	-8.615850e-47
Msa0547990	Msa1427160	0.858173	9.882639e-63	-8.615850e-47
Msa0581110	Msa1427160	0.815393	9.462147e-52	-8.615850e-47
Msa0583500	Msa1427160	0.825284	5.096833e-54	-8.615850e-47
Msa0593700	Msa1427160	0.801085	1.063289e-48	-8.615850e-47
Msa0864420	Msa1427160	0.808248	3.400442e-50	-8.615850e-47
Msa0865620	Msa1427160	0.844296	8.255192e-59	-8.615850e-47
Msa0867060	Msa1427160	0.806423	8.287058e-50	-8.615850e-47
Msa0943170	Msa1427160	0.843349	1.480212e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427160	MtrunA17_Chr2g0328321	99.194	124	1	0	1	124	1	124	4.91e-86	246

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427160	AT5G59410.1	73.077	130	29	1	1	124	1	130	5.20e-66	196
Msa1427160	AT2G29020.1	71.795	117	33	0	8	124	17	133	6.15e-52	160

Find 85 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAGCGGTGAAATTGGGAATT+AGG	0.168597	tig0026171:-10870	None:intergenic
CACACGTTTGTGGCAAATTA+TGG	0.174659	tig0026171:+14622	Msa1427160:three_prime_UTR
TTCCAGTGGTTGGAGGATTT+TGG	0.190036	tig0026171:+12399	Msa1427160:CDS
TTTATAATCAAAGTATTTAA+TGG	0.206914	tig0026171:-14815	None:intergenic
CAAGCAATGGGCCTCGTATT+TGG	0.214066	tig0026171:+12359	Msa1427160:CDS
CCTCGTATTTGGATTACTTT+GGG	0.235564	tig0026171:+12370	Msa1427160:CDS
TCTAATCTGCGCAGCTTTCC+TGG	0.257466	tig0026171:+14366	Msa1427160:intron
TGCTCGATCCCGAAGCTTCT+TGG	0.267462	tig0026171:+11108	Msa1427160:CDS
TATTGACCCGTGTTTAATAA+AGG	0.296142	tig0026171:+14677	Msa1427160:three_prime_UTR
TTTATATTTGATTTCATGTT+TGG	0.298071	tig0026171:+14467	Msa1427160:three_prime_UTR
TTGTCCTCCGGGATCATATA+TGG	0.299115	tig0026171:+13938	Msa1427160:CDS
TTATAAGATAAAATAAATAA+TGG	0.304898	tig0026171:-10966	None:intergenic
AACGGCAAGAGCGGTGAAAT+TGG	0.307608	tig0026171:-10878	None:intergenic
AGCTTCGGGATCGAGCAATT+TGG	0.310638	tig0026171:-11102	None:intergenic
AGCGGTGAAATTGGGAATTA+GGG	0.318885	tig0026171:-10869	None:intergenic
AAGGTTGATGAAGAGGAATT+TGG	0.323605	tig0026171:+13980	Msa1427160:CDS
TGGATTCTAGTCTACAGTTT+AGG	0.323678	tig0026171:+14386	Msa1427160:CDS
TCTTCACTCTCTTTGTTACT+TGG	0.330250	tig0026171:+10816	Msa1427160:five_prime_UTR
TGTTTAATAAAGGTGCTTGC+AGG	0.378128	tig0026171:+14687	Msa1427160:three_prime_UTR
GCTCGATCCCGAAGCTTCTT+GGG	0.378769	tig0026171:+11109	Msa1427160:CDS
GGAATTAGGGTTTGGTAAAA+CGG	0.379819	tig0026171:-10856	None:intergenic
AACCTTGTCCCAAGAAGCTT+CGG	0.386161	tig0026171:-11117	None:intergenic
GCCTCGTATTTGGATTACTT+TGG	0.386345	tig0026171:+12369	Msa1427160:CDS
GCATCAGAGAGACAAAATAT+TGG	0.394751	tig0026171:-14790	None:intergenic
TGAATTAATTAGTGTAAAGT+AGG	0.398454	tig0026171:-10939	None:intergenic
AAGGAGAAAGGTGACCATTC+TGG	0.409042	tig0026171:-11070	None:intergenic
GTGAAGAATTAGAAGATGAC+TGG	0.409526	tig0026171:-10800	None:intergenic
AATTAAGTTCCAGTGAGTTA+TGG	0.410416	tig0026171:-10776	None:intergenic
TTTGAATCATAAGGTAGATT+GGG	0.412860	tig0026171:-10912	None:intergenic
TGAAATTGGGAATTAGGGTT+TGG	0.420838	tig0026171:-10864	None:intergenic
TATAAGATAAAATAAATAAT+GGG	0.427970	tig0026171:-10965	None:intergenic
TCATTGATTTCAGAACACTA+TGG	0.428967	tig0026171:-14490	None:intergenic
CATCAGAGAGACAAAATATT+GGG	0.432128	tig0026171:-14789	None:intergenic
TGGGGCGCCTTTCCAGTGGT+TGG	0.443020	tig0026171:+12389	Msa1427160:CDS
TTAATGACACCACACGTTTG+TGG	0.447372	tig0026171:+14612	Msa1427160:three_prime_UTR
ACGGCAAGAGCGGTGAAATT+GGG	0.458037	tig0026171:-10877	None:intergenic
TGGCGAATTTGAAAGGAGAA+AGG	0.461188	tig0026171:-11082	None:intergenic
GAAGAGGAATTTGGCGGCCA+TGG	0.466186	tig0026171:+13989	Msa1427160:CDS
GAATTAATTAGTGTAAAGTA+GGG	0.468340	tig0026171:-10938	None:intergenic
GAATTAGGGTTTGGTAAAAC+GGG	0.470212	tig0026171:-10855	None:intergenic
TTAGGACACTTCTGATCGGC+GGG	0.474638	tig0026171:+14404	Msa1427160:exon
CCTCTTGGAGGAGGGCTCCA+TGG	0.480198	tig0026171:-14006	None:intergenic
AGCAATTTGGCGAATTTGAA+AGG	0.482080	tig0026171:-11089	None:intergenic
ATGAGAAAATGCGGGTTGGC+GGG	0.484750	tig0026171:+14509	Msa1427160:three_prime_UTR
TTACTATTCAGTAATATTGA+AGG	0.488058	tig0026171:+13961	Msa1427160:CDS
CATTGGATTCGACAAGCAAT+GGG	0.488187	tig0026171:+12347	Msa1427160:CDS
AACTTGGAGATGTATTGCAT+TGG	0.493240	tig0026171:+12330	Msa1427160:CDS
GCATTGGATTCGACAAGCAA+TGG	0.498506	tig0026171:+12346	Msa1427160:CDS
ACCTTGTCCCAAGAAGCTTC+GGG	0.501872	tig0026171:-11116	None:intergenic
CATGGAGCCCTCCTCCAAGA+GGG	0.507327	tig0026171:+14007	Msa1427160:CDS
CCATTCTGGTGGTGTTGTTG+AGG	0.511709	tig0026171:-11056	None:intergenic
TAAACTGTAGACTAGAATCC+AGG	0.517183	tig0026171:-14384	None:intergenic
AACCAAAATCCTCCAACCAC+TGG	0.518282	tig0026171:-12401	None:intergenic
GGCGCCTTTCCAGTGGTTGG+AGG	0.519426	tig0026171:+12392	Msa1427160:CDS
AATGAGAAAATGCGGGTTGG+CGG	0.525036	tig0026171:+14508	Msa1427160:three_prime_UTR
AATATTGAAGGTTGATGAAG+AGG	0.533923	tig0026171:+13973	Msa1427160:CDS
ATGGAGCCCTCCTCCAAGAG+GGG	0.538216	tig0026171:+14008	Msa1427160:CDS
TGAAGAATTAGAAGATGACT+GGG	0.540663	tig0026171:-10799	None:intergenic
GATTGGGTAACTACGAGAAA+CGG	0.544095	tig0026171:-10896	None:intergenic
TCCCGAAGCTTCTTGGGACA+AGG	0.549633	tig0026171:+11115	Msa1427160:CDS
GTTGATGAAGAGGAATTTGG+CGG	0.560236	tig0026171:+13983	Msa1427160:CDS
AACCCCAAATAGGATCAACT+TGG	0.560316	tig0026171:+12314	Msa1427160:intron
CTCGTATTTGGATTACTTTG+GGG	0.563337	tig0026171:+12371	Msa1427160:CDS
CTGAAATCAATGAGAAAATG+CGG	0.568466	tig0026171:+14500	Msa1427160:three_prime_UTR
TGAAATCAATGAGAAAATGC+GGG	0.575073	tig0026171:+14501	Msa1427160:three_prime_UTR
CCTCAACAACACCACCAGAA+TGG	0.583456	tig0026171:+11056	Msa1427160:CDS
AAATCCTCCAACCACTGGAA+AGG	0.583783	tig0026171:-12396	None:intergenic
ATAATCAAAGTATTTAATGG+AGG	0.593603	tig0026171:-14812	None:intergenic
CCATGGAGCCCTCCTCCAAG+AGG	0.596639	tig0026171:+14006	Msa1427160:CDS
TTAATATCATAATTCAAGTG+TGG	0.597042	tig0026171:-14844	None:intergenic
ACTTTGGGGCGCCTTTCCAG+TGG	0.601275	tig0026171:+12385	Msa1427160:CDS
TGCTTGCAGGCAAATTCTGA+AGG	0.601769	tig0026171:+14700	Msa1427160:three_prime_UTR
GCAAGCACCTTTATTAAACA+CGG	0.602743	tig0026171:-14684	None:intergenic
ATCAATGAGAAAATGCGGGT+TGG	0.603593	tig0026171:+14505	Msa1427160:three_prime_UTR
ACTACGAGAAACGGCAAGAG+CGG	0.607619	tig0026171:-10887	None:intergenic
GATATCTTCAGAATTTGCAA+AGG	0.610174	tig0026171:-14726	None:intergenic
ATAGTAACCATATATGATCC+CGG	0.618972	tig0026171:-13945	None:intergenic
CATAATTTGCCACAAACGTG+TGG	0.620918	tig0026171:-14621	None:intergenic
CAGTTTAGGACACTTCTGAT+CGG	0.623936	tig0026171:+14400	Msa1427160:exon
TTTAGGACACTTCTGATCGG+CGG	0.628007	tig0026171:+14403	Msa1427160:exon
CCCAAAGTAATCCAAATACG+AGG	0.634018	tig0026171:-12370	None:intergenic
CAAGCACCTTTATTAAACAC+GGG	0.647466	tig0026171:-14683	None:intergenic
GAGAAAGGTGACCATTCTGG+TGG	0.680555	tig0026171:-11067	None:intergenic
TAGGACACTTCTGATCGGCG+GGG	0.755597	tig0026171:+14405	Msa1427160:exon
GTAACCATATATGATCCCGG+AGG	0.792581	tig0026171:-13942	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTATATAAACTATGT+GGG	-	tig0026171:12095-12114	None:intergenic	10.0%
!!!	TTTTTTTTATATAAACTATG+TGG	-	tig0026171:12096-12115	None:intergenic	10.0%
!!!	TTTATAATCAAAGTATTTAA+TGG	-	tig0026171:14818-14837	None:intergenic	10.0%
!!!	TTATTTTTGAGTAAAAAAAG+TGG	+	tig0026171:11236-11255	Msa1427160:intron	15.0%
!!!	TATTTTTGAGTAAAAAAAGT+GGG	+	tig0026171:11237-11256	Msa1427160:intron	15.0%
!!!	TGGGTTTTATTAATATATTA+TGG	+	tig0026171:11256-11275	Msa1427160:intron	15.0%
!!	TAATTGATTATATTTAGACA+CGG	+	tig0026171:11401-11420	Msa1427160:intron	15.0%
!!	AATAAAATTTACACATATAG+GGG	-	tig0026171:12775-12794	None:intergenic	15.0%
!!	GAATAAAATTTACACATATA+GGG	-	tig0026171:12776-12795	None:intergenic	15.0%
!!	TGAATAAAATTTACACATAT+AGG	-	tig0026171:12777-12796	None:intergenic	15.0%
!!	TGATATATGATAAAACATTA+TGG	+	tig0026171:12966-12985	Msa1427160:intron	15.0%
!!!	TACTATTTGTTTTCATTTTT+TGG	+	tig0026171:13058-13077	Msa1427160:intron	15.0%
!!!	ATAAATTTTCTAATACATAC+TGG	-	tig0026171:13163-13182	None:intergenic	15.0%
!!	ATTACCTAAAATTAAGTTAA+GGG	-	tig0026171:13455-13474	None:intergenic	15.0%
!!!	TTTATATTTGATTTCATGTT+TGG	+	tig0026171:14467-14486	Msa1427160:three_prime_UTR	15.0%
!!	GAATTAATTAGTGTAAAGTA+GGG	-	tig0026171:10941-10960	None:intergenic	20.0%
!!	TGAATTAATTAGTGTAAAGT+AGG	-	tig0026171:10942-10961	None:intergenic	20.0%
!!	CTCAAAAATAAACAAAATCT+GGG	-	tig0026171:11227-11246	None:intergenic	20.0%
!!	ACTCAAAAATAAACAAAATC+TGG	-	tig0026171:11228-11247	None:intergenic	20.0%
!!	AAAACTTGAGAGTAAATTAA+TGG	-	tig0026171:11298-11317	None:intergenic	20.0%
!!	ATTACTCATCTAATTAAACA+TGG	-	tig0026171:11366-11385	None:intergenic	20.0%
!!	AATGAATCATGAACAAATTA+AGG	-	tig0026171:11520-11539	None:intergenic	20.0%
!!	TACGGAAAAATATATTTGTT+GGG	-	tig0026171:11691-11710	None:intergenic	20.0%
!!	AAAACTAAATGGTTAATCTA+GGG	-	tig0026171:12005-12024	None:intergenic	20.0%
!!!	GTATTGACATTAAATTATGT+AGG	-	tig0026171:12598-12617	None:intergenic	20.0%
!!	ATAAAATTTACACATATAGG+GGG	-	tig0026171:12774-12793	None:intergenic	20.0%
!!!	TGTAAATTTTATTCAGAACT+TGG	+	tig0026171:12782-12801	Msa1427160:intron	20.0%
!!	TTACCTAAAATTAAGTTAAG+GGG	-	tig0026171:13454-13473	None:intergenic	20.0%
!!	CATTACCTAAAATTAAGTTA+AGG	-	tig0026171:13456-13475	None:intergenic	20.0%
!!!	TTTTTTTCTTCACTTCATTT+TGG	+	tig0026171:13495-13514	Msa1427160:intron	20.0%
!!!	TTTTTTTTTCCACATCATTT+TGG	-	tig0026171:13670-13689	None:intergenic	20.0%
!!!	AATGTGTACTATTTTAAACT+AGG	-	tig0026171:13744-13763	None:intergenic	20.0%
!!!	AGTACACATTATGTTTTTAT+TGG	+	tig0026171:13754-13773	Msa1427160:intron	20.0%
!!	TTACTATTCAGTAATATTGA+AGG	+	tig0026171:13961-13980	Msa1427160:CDS	20.0%
!!!	GCAAATTTAATTTTTTGTGT+GGG	-	tig0026171:14106-14125	None:intergenic	20.0%
!!!	AGCAAATTTAATTTTTTGTG+TGG	-	tig0026171:14107-14126	None:intergenic	20.0%
!!!	GCAAATTTAATTTTTTGTGT+GGG	-	tig0026171:14106-14125	None:intergenic	20.0%
!!!	AGCAAATTTAATTTTTTGTG+TGG	-	tig0026171:14107-14126	None:intergenic	20.0%
!!!	GCAAATTTAATTTTTTGTGT+GGG	-	tig0026171:14106-14125	None:intergenic	20.0%
!!!	AGCAAATTTAATTTTTTGTG+TGG	-	tig0026171:14107-14126	None:intergenic	20.0%
!!!	ATAATCAAAGTATTTAATGG+AGG	-	tig0026171:14815-14834	None:intergenic	20.0%
!!	TTAATATCATAATTCAAGTG+TGG	-	tig0026171:14847-14866	None:intergenic	20.0%
!!!	TTTTATTTTCCATAACTCAC+TGG	+	tig0026171:10767-10786	Msa1427160:five_prime_UTR	25.0%
!	TTTGAATCATAAGGTAGATT+GGG	-	tig0026171:10915-10934	None:intergenic	25.0%
!!	TTTTGAATCATAAGGTAGAT+TGG	-	tig0026171:10916-10935	None:intergenic	25.0%
!!!	GACTTTTTTTTCTTTAGAGT+TGG	+	tig0026171:11450-11469	Msa1427160:intron	25.0%
!	TCATGATTCATTGATATTGT+TGG	+	tig0026171:11528-11547	Msa1427160:intron	25.0%
!	GTACGGAAAAATATATTTGT+TGG	-	tig0026171:11692-11711	None:intergenic	25.0%
!	AAACTACACTATAATCAAAC+GGG	-	tig0026171:11887-11906	None:intergenic	25.0%
!	GAAACTACACTATAATCAAA+CGG	-	tig0026171:11888-11907	None:intergenic	25.0%
!!	TATAGTGTAGTTTCTTCTTT+TGG	+	tig0026171:11894-11913	Msa1427160:intron	25.0%
!!	ATAGTGTAGTTTCTTCTTTT+GGG	+	tig0026171:11895-11914	Msa1427160:intron	25.0%
!	GAAAACTAAATGGTTAATCT+AGG	-	tig0026171:12006-12025	None:intergenic	25.0%
!	ACAAATCAGTGAAAACTAAA+TGG	-	tig0026171:12016-12035	None:intergenic	25.0%
!!!	TTAGTTTTCACTGATTTGTT+TGG	+	tig0026171:12017-12036	Msa1427160:intron	25.0%
!	TTAAGATAAACATACAGGAT+CGG	-	tig0026171:12449-12468	None:intergenic	25.0%
!!!	CAACTTTAAGATAAACATAC+AGG	-	tig0026171:12454-12473	None:intergenic	25.0%
!!!	AAGATGTGCTATTTTTTAAG+TGG	-	tig0026171:12835-12854	None:intergenic	25.0%
!	TGTCAACTAATGAGTTATTT+AGG	+	tig0026171:12939-12958	Msa1427160:intron	25.0%
!	GTCAACTAATGAGTTATTTA+GGG	+	tig0026171:12940-12959	Msa1427160:intron	25.0%
!	AAAATGTGACTTAAGTTACA+TGG	+	tig0026171:13097-13116	Msa1427160:intron	25.0%
!	TGTATACAGTATATCTAGAA+AGG	-	tig0026171:13198-13217	None:intergenic	25.0%
!	AATAACTAAACAAGCATCTA+AGG	-	tig0026171:13333-13352	None:intergenic	25.0%
!!!	AGTACTGGTTATATTTTGAT+TGG	-	tig0026171:13358-13377	None:intergenic	25.0%
!	TTGAAATACATATCCAAACA+TGG	-	tig0026171:13530-13549	None:intergenic	25.0%
!!!	AAATCTAAGGTTTTCTTTTG+GGG	-	tig0026171:13610-13629	None:intergenic	25.0%
!!!	CAAATCTAAGGTTTTCTTTT+GGG	-	tig0026171:13611-13630	None:intergenic	25.0%
!!!	TCAAATCTAAGGTTTTCTTT+TGG	-	tig0026171:13612-13631	None:intergenic	25.0%
	AATTAAGTTCCAGTGAGTTA+TGG	-	tig0026171:10779-10798	None:intergenic	30.0%
	TGAAGAATTAGAAGATGACT+GGG	-	tig0026171:10802-10821	None:intergenic	30.0%
!	GTAGGGATTTTTGAATCATA+AGG	-	tig0026171:10924-10943	None:intergenic	30.0%
	AGATCGAAAAACATGAAAAC+AGG	-	tig0026171:11162-11181	None:intergenic	30.0%
!!!	AGGTTGTTTTTTCAGGAAAT+AGG	+	tig0026171:11187-11206	Msa1427160:intron	30.0%
	TAAATGCAACCAACATAGTT+TGG	-	tig0026171:11764-11783	None:intergenic	30.0%
	GATCATAGATAATGAGATCA+TGG	-	tig0026171:11803-11822	None:intergenic	30.0%
	CAAAACTGAATGCTTAATCA+AGG	-	tig0026171:11835-11854	None:intergenic	30.0%
!!!	ATTCAGTTTTGCTGATTTGT+TGG	+	tig0026171:11844-11863	Msa1427160:intron	30.0%
!!!	TTCAGTTTTGCTGATTTGTT+GGG	+	tig0026171:11845-11864	Msa1427160:intron	30.0%
	AACTACACTATAATCAAACG+GGG	-	tig0026171:11886-11905	None:intergenic	30.0%
	CATGTAGTATGTGATTGATA+TGG	+	tig0026171:12141-12160	Msa1427160:intron	30.0%
	ATTGTGGAAGATACTTTAGA+AGG	+	tig0026171:12179-12198	Msa1427160:intron	30.0%
	AAAGATAAAAACAGAGAAGC+TGG	-	tig0026171:12285-12304	None:intergenic	30.0%
	TCGGTAAAATAAACACTTAC+AGG	-	tig0026171:12430-12449	None:intergenic	30.0%
	ATCAGTGAATATGAGAATTC+TGG	-	tig0026171:12528-12547	None:intergenic	30.0%
	TCGTGCATAAACAACTTTAT+TGG	+	tig0026171:12557-12576	Msa1427160:intron	30.0%
	CGTGCATAAACAACTTTATT+GGG	+	tig0026171:12558-12577	Msa1427160:intron	30.0%
!	ATTATCTGAAATACCAATGC+TGG	+	tig0026171:12637-12656	Msa1427160:intron	30.0%
!	AACAAAATTTTCTCCAGCAT+TGG	-	tig0026171:12653-12672	None:intergenic	30.0%
!	AATGCTGGAGAAAATTTTGT+TGG	+	tig0026171:12652-12671	Msa1427160:intron	30.0%
	ATGACAACTTGTAAGAACAA+AGG	-	tig0026171:12681-12700	None:intergenic	30.0%
	CTAAGTGTGATGCAAATATT+GGG	-	tig0026171:12704-12723	None:intergenic	30.0%
!	TGCTCTAAGTACAGAAATTA+GGG	+	tig0026171:12746-12765	Msa1427160:intron	30.0%
	GGTCATGAAATCAAAAACAA+TGG	+	tig0026171:12803-12822	Msa1427160:intron	30.0%
	CATGAAATCAAAAACAATGG+AGG	+	tig0026171:12806-12825	Msa1427160:intron	30.0%
	GATATAAAAACGAAGAACTG+AGG	-	tig0026171:12862-12881	None:intergenic	30.0%
!	TGATCGTCTTTTGCATAAAT+TGG	+	tig0026171:13126-13145	Msa1427160:intron	30.0%
!!!	GTGAAATTTTTTGTCCAGAA+GGG	+	tig0026171:13249-13268	Msa1427160:intron	30.0%
	TCTCAGTCTTAAGTATATGT+TGG	+	tig0026171:13583-13602	Msa1427160:intron	30.0%
	CTCAGTCTTAAGTATATGTT+GGG	+	tig0026171:13584-13603	Msa1427160:intron	30.0%
	ATTCTCAAGCTTCAAATCTA+AGG	-	tig0026171:13623-13642	None:intergenic	30.0%
	TGAGAATCCATATACAAACA+TGG	+	tig0026171:13636-13655	Msa1427160:intron	30.0%
!	CTTAATTTCAGGTAACGATT+TGG	-	tig0026171:13697-13716	None:intergenic	30.0%
	TCGTTACCTGAAATTAAGTT+TGG	+	tig0026171:13699-13718	Msa1427160:intron	30.0%
	CGTTACCTGAAATTAAGTTT+GGG	+	tig0026171:13700-13719	Msa1427160:intron	30.0%
!	AAACTTTTCATTGCACTAGT+AGG	+	tig0026171:13830-13849	Msa1427160:intron	30.0%
	AAAAAGCTGCAATACAAACA+GGG	-	tig0026171:13914-13933	None:intergenic	30.0%
	TAAAAAGCTGCAATACAAAC+AGG	-	tig0026171:13915-13934	None:intergenic	30.0%
	ATAGTAACCATATATGATCC+CGG	-	tig0026171:13948-13967	None:intergenic	30.0%
!!	AATATTGAAGGTTGATGAAG+AGG	+	tig0026171:13973-13992	Msa1427160:CDS	30.0%
	AGAAAAGAAGTCTTAGATTG+TGG	-	tig0026171:14143-14162	None:intergenic	30.0%
	AAACTTTCTACTGTTAATCC+AGG	-	tig0026171:14181-14200	None:intergenic	30.0%
	AGAAAAGAAGTCTTAGATTG+TGG	-	tig0026171:14143-14162	None:intergenic	30.0%
	AAACTTTCTACTGTTAATCC+AGG	-	tig0026171:14181-14200	None:intergenic	30.0%
	AGAAAAGAAGTCTTAGATTG+TGG	-	tig0026171:14143-14162	None:intergenic	30.0%
!!	TCATTGATTTCAGAACACTA+TGG	-	tig0026171:14493-14512	None:intergenic	30.0%
	CTGAAATCAATGAGAAAATG+CGG	+	tig0026171:14500-14519	Msa1427160:three_prime_UTR	30.0%
	TGAAATCAATGAGAAAATGC+GGG	+	tig0026171:14501-14520	Msa1427160:three_prime_UTR	30.0%
!	AAAACATTCTGATTTTGTCG+AGG	+	tig0026171:14549-14568	Msa1427160:three_prime_UTR	30.0%
!	AAACATTCTGATTTTGTCGA+GGG	+	tig0026171:14550-14569	Msa1427160:three_prime_UTR	30.0%
	TATTGACCCGTGTTTAATAA+AGG	+	tig0026171:14677-14696	Msa1427160:three_prime_UTR	30.0%
	GATATCTTCAGAATTTGCAA+AGG	-	tig0026171:14729-14748	None:intergenic	30.0%
	CATCAGAGAGACAAAATATT+GGG	-	tig0026171:14792-14811	None:intergenic	30.0%
!!!	ATTAGTTTTGCACTATGTTG+AGG	+	tig0026171:14882-14901	Msa1427160:three_prime_UTR	30.0%
!!!	TTAGTTTTGCACTATGTTGA+GGG	+	tig0026171:14883-14902	Msa1427160:three_prime_UTR	30.0%
	GTGAAGAATTAGAAGATGAC+TGG	-	tig0026171:10803-10822	None:intergenic	35.0%
	TCTTCACTCTCTTTGTTACT+TGG	+	tig0026171:10816-10835	Msa1427160:five_prime_UTR	35.0%
!	GAATTAGGGTTTGGTAAAAC+GGG	-	tig0026171:10858-10877	None:intergenic	35.0%
!	GGAATTAGGGTTTGGTAAAA+CGG	-	tig0026171:10859-10878	None:intergenic	35.0%
	TGAAATTGGGAATTAGGGTT+TGG	-	tig0026171:10867-10886	None:intergenic	35.0%
	AGCAATTTGGCGAATTTGAA+AGG	-	tig0026171:11092-11111	None:intergenic	35.0%
!!	CATGTTTTTCGATCTGTTTG+AGG	+	tig0026171:11167-11186	Msa1427160:intron	35.0%
!!!	CTGTTTGAGGTTGTTTTTTC+AGG	+	tig0026171:11180-11199	Msa1427160:intron	35.0%
	CGGTATAAGTATCAGTGATT+TGG	+	tig0026171:11421-11440	Msa1427160:intron	35.0%
	AGAGAGTGAGATCCATTTAA+GGG	+	tig0026171:11655-11674	Msa1427160:intron	35.0%
!	ATATATTTTTCCGTACGCAC+CGG	+	tig0026171:11696-11715	Msa1427160:intron	35.0%
	ACTTGGGTCTCTTAAGTATT+CGG	-	tig0026171:11727-11746	None:intergenic	35.0%
	TGCATTTAGCTGATATGAGT+TGG	+	tig0026171:11776-11795	Msa1427160:intron	35.0%
!!!	TTTTGCTGATTTGTTGGGTT+CGG	+	tig0026171:11850-11869	Msa1427160:intron	35.0%
!!	ATTTAACAGTGGTTCTGAGT+TGG	+	tig0026171:11947-11966	Msa1427160:intron	35.0%
	ACTAAATGGTTAATCTAGGG+TGG	-	tig0026171:12002-12021	None:intergenic	35.0%
	GATGTAGCTTCTCTAAATTG+TGG	+	tig0026171:12163-12182	Msa1427160:intron	35.0%
!	TTTTGCACTTCTCATTCTAG+AGG	+	tig0026171:12225-12244	Msa1427160:intron	35.0%
	TAAAAACAGAGAAGCTGGTT+AGG	-	tig0026171:12280-12299	None:intergenic	35.0%
!!	TCTCCAAGTTGATCCTATTT+GGG	-	tig0026171:12320-12339	None:intergenic	35.0%
!!	ATCTCCAAGTTGATCCTATT+TGG	-	tig0026171:12321-12340	None:intergenic	35.0%
	AACTTGGAGATGTATTGCAT+TGG	+	tig0026171:12330-12349	Msa1427160:CDS	35.0%
	CCTCGTATTTGGATTACTTT+GGG	+	tig0026171:12370-12389	Msa1427160:CDS	35.0%
	CTCGTATTTGGATTACTTTG+GGG	+	tig0026171:12371-12390	Msa1427160:CDS	35.0%
	TCTGGAAAGACTAAATCATC+AGG	-	tig0026171:12510-12529	None:intergenic	35.0%
	CCTAAGTGTGATGCAAATAT+TGG	-	tig0026171:12705-12724	None:intergenic	35.0%
	CCAATATTTGCATCACACTT+AGG	+	tig0026171:12702-12721	Msa1427160:intron	35.0%
!	CTGCTCTAAGTACAGAAATT+AGG	+	tig0026171:12745-12764	Msa1427160:intron	35.0%
	CCTTGCAAAGCAAAATTTGA+TGG	-	tig0026171:13230-13249	None:intergenic	35.0%
!	CCATCAAATTTTGCTTTGCA+AGG	+	tig0026171:13227-13246	Msa1427160:intron	35.0%
!!!	GGTGAAATTTTTTGTCCAGA+AGG	+	tig0026171:13248-13267	Msa1427160:intron	35.0%
	AAAGACAAATGATGAAGGTG+AGG	-	tig0026171:13278-13297	None:intergenic	35.0%
	TTGGGAAAGACAAATGATGA+AGG	-	tig0026171:13283-13302	None:intergenic	35.0%
!!	TAGAGTTTTGTCGTAAGTCT+GGG	-	tig0026171:13306-13325	None:intergenic	35.0%
!!	ATAGAGTTTTGTCGTAAGTC+TGG	-	tig0026171:13307-13326	None:intergenic	35.0%
	TGAGGTGTAAAATACAGTAC+TGG	-	tig0026171:13373-13392	None:intergenic	35.0%
	ATGTGATGATCTCACATTTG+AGG	-	tig0026171:13391-13410	None:intergenic	35.0%
	ACAAGTGTGAGGAAGTTAAA+AGG	+	tig0026171:13411-13430	Msa1427160:intron	35.0%
!	CTGCCCCTTAACTTAATTTT+AGG	+	tig0026171:13448-13467	Msa1427160:intron	35.0%
	CATATCCAAACATGGATAGA+AGG	-	tig0026171:13522-13541	None:intergenic	35.0%
	CCTTCATCCATGTTTGTATA+TGG	-	tig0026171:13646-13665	None:intergenic	35.0%
	CCATATACAAACATGGATGA+AGG	+	tig0026171:13643-13662	Msa1427160:intron	35.0%
!	TGAAATTAAGTTTGGGACCA+CGG	+	tig0026171:13707-13726	Msa1427160:intron	35.0%
	AAACAGGGAAACTCTACTTT+AGG	-	tig0026171:13899-13918	None:intergenic	35.0%
!!!	AGCTTTTTAGTTTTGTCCTC+CGG	+	tig0026171:13926-13945	Msa1427160:intron	35.0%
!!	AAGGTTGATGAAGAGGAATT+TGG	+	tig0026171:13980-13999	Msa1427160:CDS	35.0%
!	TGCATCTACAACTCTTTTTC+TGG	+	tig0026171:14036-14055	Msa1427160:CDS	35.0%
	TAAACTGTAGACTAGAATCC+AGG	-	tig0026171:14387-14406	None:intergenic	35.0%
	TGGATTCTAGTCTACAGTTT+AGG	+	tig0026171:14386-14405	Msa1427160:CDS	35.0%
	CAAGCACCTTTATTAAACAC+GGG	-	tig0026171:14686-14705	None:intergenic	35.0%
	GCAAGCACCTTTATTAAACA+CGG	-	tig0026171:14687-14706	None:intergenic	35.0%
!!	TGTTTAATAAAGGTGCTTGC+AGG	+	tig0026171:14687-14706	Msa1427160:three_prime_UTR	35.0%
	GCATCAGAGAGACAAAATAT+TGG	-	tig0026171:14793-14812	None:intergenic	35.0%
	AGCGGTGAAATTGGGAATTA+GGG	-	tig0026171:10872-10891	None:intergenic	40.0%
	GATTGGGTAACTACGAGAAA+CGG	-	tig0026171:10899-10918	None:intergenic	40.0%
	TGGCGAATTTGAAAGGAGAA+AGG	-	tig0026171:11085-11104	None:intergenic	40.0%
	ATTGTGAGCAGAGGATAACT+TGG	-	tig0026171:11628-11647	None:intergenic	40.0%
	CTCAGATAAATTGTGAGCAG+AGG	-	tig0026171:11637-11656	None:intergenic	40.0%
	GAGAGAGTGAGATCCATTTA+AGG	+	tig0026171:11654-11673	Msa1427160:intron	40.0%
	GAGAGTGAGATCCATTTAAG+GGG	+	tig0026171:11656-11675	Msa1427160:intron	40.0%
	GAATGCTTAATCAAGGACAG+AGG	-	tig0026171:11828-11847	None:intergenic	40.0%
!!	TTTTGGGCTTTAATGCGACA+TGG	+	tig0026171:11911-11930	Msa1427160:intron	40.0%
	GCTGGTGGTTTATTTAACAG+TGG	+	tig0026171:11936-11955	Msa1427160:intron	40.0%
	ACTGCAATCAAACAAGGAGT+AGG	-	tig0026171:12047-12066	None:intergenic	40.0%
	AACTGCACTGCAATCAAACA+AGG	-	tig0026171:12053-12072	None:intergenic	40.0%
!	GCAGTGCAGTTTCTTCTTTT+TGG	+	tig0026171:12062-12081	Msa1427160:intron	40.0%
	CAGCTAAGCATAGCAATTAC+TGG	-	tig0026171:12121-12140	None:intergenic	40.0%
!	AGTTGATCCTATTTGGGGTT+GGG	-	tig0026171:12314-12333	None:intergenic	40.0%
!	AAGTTGATCCTATTTGGGGT+TGG	-	tig0026171:12315-12334	None:intergenic	40.0%
	AACCCCAAATAGGATCAACT+TGG	+	tig0026171:12314-12333	Msa1427160:intron	40.0%
!!	CTCCAAGTTGATCCTATTTG+GGG	-	tig0026171:12319-12338	None:intergenic	40.0%
	CATTGGATTCGACAAGCAAT+GGG	+	tig0026171:12347-12366	Msa1427160:CDS	40.0%
	GCCTCGTATTTGGATTACTT+TGG	+	tig0026171:12369-12388	Msa1427160:CDS	40.0%
	CCCAAAGTAATCCAAATACG+AGG	-	tig0026171:12373-12392	None:intergenic	40.0%
!	TTTTGTCGTAAGTCTGGGTT+GGG	-	tig0026171:13301-13320	None:intergenic	40.0%
	GATCATCACATACAAGTGTG+AGG	+	tig0026171:13400-13419	Msa1427160:intron	40.0%
	AAATTAAGTTAAGGGGCAGC+AGG	-	tig0026171:13447-13466	None:intergenic	40.0%
	TTGGTCCTTCTATCCATGTT+TGG	+	tig0026171:13514-13533	Msa1427160:intron	40.0%
	GATGAAGGACCAAAATGATG+TGG	+	tig0026171:13658-13677	Msa1427160:intron	40.0%
	GTGGTCCCAAACTTAATTTC+AGG	-	tig0026171:13708-13727	None:intergenic	40.0%
	ACTAGGCAAAATTACTTCCG+TGG	-	tig0026171:13727-13746	None:intergenic	40.0%
	ACCTGGGAATTGTATGAGTT+TGG	+	tig0026171:13802-13821	Msa1427160:intron	40.0%
	ACCAAACTCATACAATTCCC+AGG	-	tig0026171:13806-13825	None:intergenic	40.0%
!!!	GCTTTTTAGTTTTGTCCTCC+GGG	+	tig0026171:13927-13946	Msa1427160:intron	40.0%
!	GTTGATGAAGAGGAATTTGG+CGG	+	tig0026171:13983-14002	Msa1427160:CDS	40.0%
!	CAGTTTAGGACACTTCTGAT+CGG	+	tig0026171:14400-14419	Msa1427160:exon	40.0%
	ATCAATGAGAAAATGCGGGT+TGG	+	tig0026171:14505-14524	Msa1427160:three_prime_UTR	40.0%
	TTAATGACACCACACGTTTG+TGG	+	tig0026171:14612-14631	Msa1427160:three_prime_UTR	40.0%
!	CATAATTTGCCACAAACGTG+TGG	-	tig0026171:14624-14643	None:intergenic	40.0%
	CACACGTTTGTGGCAAATTA+TGG	+	tig0026171:14622-14641	Msa1427160:three_prime_UTR	40.0%
	GAGCGGTGAAATTGGGAATT+AGG	-	tig0026171:10873-10892	None:intergenic	45.0%
	AAGGAGAAAGGTGACCATTC+TGG	-	tig0026171:11073-11092	None:intergenic	45.0%
	AACCTTGTCCCAAGAAGCTT+CGG	-	tig0026171:11120-11139	None:intergenic	45.0%
	GGAGAAGTCAACCCCTTAAA+TGG	-	tig0026171:11670-11689	None:intergenic	45.0%
	TCTTAAGTATTCGGTCTGGC+CGG	-	tig0026171:11718-11737	None:intergenic	45.0%
	GGTCTCTTAAGTATTCGGTC+TGG	-	tig0026171:11722-11741	None:intergenic	45.0%
	GGCACAAGTGCTAGATACTT+GGG	-	tig0026171:11743-11762	None:intergenic	45.0%
	TGGCACAAGTGCTAGATACT+TGG	-	tig0026171:11744-11763	None:intergenic	45.0%
	GCACTTGTGCCAAACTATGT+TGG	+	tig0026171:11752-11771	Msa1427160:intron	45.0%
	CTTTAATGCGACATGGTTGC+TGG	+	tig0026171:11918-11937	Msa1427160:intron	45.0%
!	GTTGATCCTATTTGGGGTTG+GGG	-	tig0026171:12313-12332	None:intergenic	45.0%
	GCATTGGATTCGACAAGCAA+TGG	+	tig0026171:12346-12365	Msa1427160:CDS	45.0%
	AAATCCTCCAACCACTGGAA+AGG	-	tig0026171:12399-12418	None:intergenic	45.0%
!	TTCCAGTGGTTGGAGGATTT+TGG	+	tig0026171:12399-12418	Msa1427160:CDS	45.0%
	AACCAAAATCCTCCAACCAC+TGG	-	tig0026171:12404-12423	None:intergenic	45.0%
	TCACTCTATCCATAAGCCAC+TGG	+	tig0026171:12480-12499	Msa1427160:intron	45.0%
	TAAATCATCAGGCAAGCCAG+TGG	-	tig0026171:12499-12518	None:intergenic	45.0%
!	AAGCCTTATCCCACTAAGTG+GGG	-	tig0026171:13015-13034	None:intergenic	45.0%
!	CAAGCCTTATCCCACTAAGT+GGG	-	tig0026171:13016-13035	None:intergenic	45.0%
!	GTTTTGTCGTAAGTCTGGGT+TGG	-	tig0026171:13302-13321	None:intergenic	45.0%
	CTTAAGACTGAGAGCTCACT+GGG	-	tig0026171:13576-13595	None:intergenic	45.0%
	ACTTAAGACTGAGAGCTCAC+TGG	-	tig0026171:13577-13596	None:intergenic	45.0%
	ATACAATTCCCAGGTGCTTG+TGG	-	tig0026171:13797-13816	None:intergenic	45.0%
	TTGTCCTCCGGGATCATATA+TGG	+	tig0026171:13938-13957	Msa1427160:CDS	45.0%
	GTAACCATATATGATCCCGG+AGG	-	tig0026171:13945-13964	None:intergenic	45.0%
	TAGATGCAAAAAGCCCCTCT+TGG	-	tig0026171:14024-14043	None:intergenic	45.0%
!	TTTAGGACACTTCTGATCGG+CGG	+	tig0026171:14403-14422	Msa1427160:exon	45.0%
!!	AATGAGAAAATGCGGGTTGG+CGG	+	tig0026171:14508-14527	Msa1427160:three_prime_UTR	45.0%
!	CATTCTGATTTTGTCGAGGG+TGG	+	tig0026171:14553-14572	Msa1427160:three_prime_UTR	45.0%
	TGCTTGCAGGCAAATTCTGA+AGG	+	tig0026171:14700-14719	Msa1427160:three_prime_UTR	45.0%
!!	TATAAGATAAAATAAATAAT+GGG	-	tig0026171:10968-10987	None:intergenic	5.0%
!!	TTATAAGATAAAATAAATAA+TGG	-	tig0026171:10969-10988	None:intergenic	5.0%
	ACGGCAAGAGCGGTGAAATT+GGG	-	tig0026171:10880-10899	None:intergenic	50.0%
	AACGGCAAGAGCGGTGAAAT+TGG	-	tig0026171:10881-10900	None:intergenic	50.0%
	ACTACGAGAAACGGCAAGAG+CGG	-	tig0026171:10890-10909	None:intergenic	50.0%
!!	CCATTCTGGTGGTGTTGTTG+AGG	-	tig0026171:11059-11078	None:intergenic	50.0%
	CCTCAACAACACCACCAGAA+TGG	+	tig0026171:11056-11075	Msa1427160:CDS	50.0%
	GAGAAAGGTGACCATTCTGG+TGG	-	tig0026171:11070-11089	None:intergenic	50.0%
	AGCTTCGGGATCGAGCAATT+TGG	-	tig0026171:11105-11124	None:intergenic	50.0%
	ACCTTGTCCCAAGAAGCTTC+GGG	-	tig0026171:11119-11138	None:intergenic	50.0%
	TAATGCGACATGGTTGCTGG+TGG	+	tig0026171:11921-11940	Msa1427160:intron	50.0%
	CAAGCAATGGGCCTCGTATT+TGG	+	tig0026171:12359-12378	Msa1427160:CDS	50.0%
	CTTATCCCACTAAGTGGGGT+CGG	-	tig0026171:13011-13030	None:intergenic	50.0%
!	CCAAGCCTTATCCCACTAAG+TGG	-	tig0026171:13017-13036	None:intergenic	50.0%
	CCACTTAGTGGGATAAGGCT+TGG	+	tig0026171:13014-13033	Msa1427160:intron	50.0%
	TGAAGGTGAGGATTCCCTTC+TGG	-	tig0026171:13266-13285	None:intergenic	50.0%
	ACCACAAATCCACAAGCACC+TGG	+	tig0026171:13785-13804	Msa1427160:intron	50.0%
	CCACAAATCCACAAGCACCT+GGG	+	tig0026171:13786-13805	Msa1427160:intron	50.0%
	AAAAAGCCCCTCTTGGAGGA+GGG	-	tig0026171:14017-14036	None:intergenic	50.0%
	ATGCAAAAAGCCCCTCTTGG+AGG	-	tig0026171:14021-14040	None:intergenic	50.0%
	TCTAATCTGCGCAGCTTTCC+TGG	+	tig0026171:14160-14179	Msa1427160:intron	50.0%
	TCTAATCTGCGCAGCTTTCC+TGG	+	tig0026171:14160-14179	Msa1427160:intron	50.0%
	TCTAATCTGCGCAGCTTTCC+TGG	+	tig0026171:14160-14179	Msa1427160:intron	50.0%
	TTAGGACACTTCTGATCGGC+GGG	+	tig0026171:14404-14423	Msa1427160:exon	50.0%
!!	ATGAGAAAATGCGGGTTGGC+GGG	+	tig0026171:14509-14528	Msa1427160:three_prime_UTR	50.0%
	TGCTCGATCCCGAAGCTTCT+TGG	+	tig0026171:11108-11127	Msa1427160:CDS	55.0%
	GCTCGATCCCGAAGCTTCTT+GGG	+	tig0026171:11109-11128	Msa1427160:CDS	55.0%
	TCCCGAAGCTTCTTGGGACA+AGG	+	tig0026171:11115-11134	Msa1427160:CDS	55.0%
	TCACCTCCCCAACCCCAAAT+AGG	+	tig0026171:12304-12323	Msa1427160:intron	55.0%
!	GATCCTATTTGGGGTTGGGG+AGG	-	tig0026171:12310-12329	None:intergenic	55.0%
	TCAGGCAAGCCAGTGGCTTA+TGG	-	tig0026171:12492-12511	None:intergenic	55.0%
	ACTAAGTGGGGTCGGTTGCA+TGG	-	tig0026171:13003-13022	None:intergenic	55.0%
	ATGCAACCGACCCCACTTAG+TGG	+	tig0026171:13002-13021	Msa1427160:intron	55.0%
	TGCAACCGACCCCACTTAGT+GGG	+	tig0026171:13003-13022	Msa1427160:intron	55.0%
	CGACCCCACTTAGTGGGATA+AGG	+	tig0026171:13009-13028	Msa1427160:intron	55.0%
	CCCAGGTGCTTGTGGATTTG+TGG	-	tig0026171:13789-13808	None:intergenic	55.0%
	GAAGAGGAATTTGGCGGCCA+TGG	+	tig0026171:13989-14008	Msa1427160:CDS	55.0%
	CAAAAAGCCCCTCTTGGAGG+AGG	-	tig0026171:14018-14037	None:intergenic	55.0%
	TAGGACACTTCTGATCGGCG+GGG	+	tig0026171:14405-14424	Msa1427160:exon	55.0%
!!	ACTTTGGGGCGCCTTTCCAG+TGG	+	tig0026171:12385-12404	Msa1427160:CDS	60.0%
	CATGGAGCCCTCCTCCAAGA+GGG	+	tig0026171:14007-14026	Msa1427160:CDS	60.0%
	ATGGAGCCCTCCTCCAAGAG+GGG	+	tig0026171:14008-14027	Msa1427160:CDS	60.0%
	TTCGGTCTGGCCGGTGCGTA+CGG	-	tig0026171:11709-11728	None:intergenic	65.0%
!	TGGGGCGCCTTTCCAGTGGT+TGG	+	tig0026171:12389-12408	Msa1427160:CDS	65.0%
	GGCGCCTTTCCAGTGGTTGG+AGG	+	tig0026171:12392-12411	Msa1427160:CDS	65.0%
	CCTCTTGGAGGAGGGCTCCA+TGG	-	tig0026171:14009-14028	None:intergenic	65.0%
	CCATGGAGCCCTCCTCCAAG+AGG	+	tig0026171:14006-14025	Msa1427160:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0026171	gene	10711	14935	10711	ID=Msa1427160;Name=Msa1427160
tig0026171	mRNA	10711	14935	10711	ID=Msa1427160-mRNA-1;Parent=Msa1427160;Name=Msa1427160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=324\|1\|1\|1\|0.66\|0.75\|4\|517\|124
tig0026171	exon	10711	11136	10711	ID=Msa1427160-mRNA-1:exon:5293;Parent=Msa1427160-mRNA-1
tig0026171	exon	12326	12429	12326	ID=Msa1427160-mRNA-1:exon:5294;Parent=Msa1427160-mRNA-1
tig0026171	exon	13928	14057	13928	ID=Msa1427160-mRNA-1:exon:5295;Parent=Msa1427160-mRNA-1
tig0026171	exon	14380	14935	14380	ID=Msa1427160-mRNA-1:exon:5296;Parent=Msa1427160-mRNA-1
tig0026171	five_prime_UTR	10711	11034	10711	ID=Msa1427160-mRNA-1:five_prime_utr;Parent=Msa1427160-mRNA-1
tig0026171	CDS	11035	11136	11035	ID=Msa1427160-mRNA-1:cds;Parent=Msa1427160-mRNA-1
tig0026171	CDS	12326	12429	12326	ID=Msa1427160-mRNA-1:cds;Parent=Msa1427160-mRNA-1
tig0026171	CDS	13928	14057	13928	ID=Msa1427160-mRNA-1:cds;Parent=Msa1427160-mRNA-1
tig0026171	CDS	14380	14418	14380	ID=Msa1427160-mRNA-1:cds;Parent=Msa1427160-mRNA-1
tig0026171	three_prime_UTR	14419	14935	14419	ID=Msa1427160-mRNA-1:three_prime_utr;Parent=Msa1427160-mRNA-1

Gene Sequence	>Msa1427160 ATGAAAGAAGCTAAATCTGTTCCTCAACAACACCACCAGAATGGTCACCTTTCTCCTTTCAAATTCGCCAAATTGCTCGATCCCGAAGCTTCTTGGGACAAGGATCAACTTGGAGATGTATTGCATTGGATTCGACAAGCAATGGGCCTCGTATTTGGATTACTTTGGGGCGCCTTTCCAGTGGTTGGAGGATTTTGGTTTATCCTCTTTTTAGTTTTGTCCTCCGGGATCATATATGGTTACTATTCAGTAATATTGAAGGTTGATGAAGAGGAATTTGGCGGCCATGGAGCCCTCCTCCAAGAGGGGCTTTTTGCATCTACAACTCTTTTTCTGCTTTCCTGGATTCTAGTCTACAGTTTAGGACACTTCTGA
Protein sequence	>Msa1427160 MKEAKSVPQQHHQNGHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAMGLVFGLLWGAFPVVGGFWFILFLVLSSGIIYGYYSVILKVDEEEFGGHGALLQEGLFASTTLFLLSWILVYSLGHF*