Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1154820 | 0.806798 | 6.905063e-50 | -8.615850e-47 |
| Msa0012780 | Msa1154820 | -0.814114 | 1.816449e-51 | -8.615850e-47 |
| Msa0022640 | Msa1154820 | 0.819517 | 1.113968e-52 | -8.615850e-47 |
| Msa0052460 | Msa1154820 | 0.800034 | 1.741507e-48 | -8.615850e-47 |
| Msa0106110 | Msa1154820 | -0.800243 | 1.579484e-48 | -8.615850e-47 |
| Msa0619330 | Msa1154820 | 0.830580 | 2.710432e-55 | -8.615850e-47 |
| Msa0620640 | Msa1154820 | 0.801331 | 9.471162e-49 | -8.615850e-47 |
| Msa0623170 | Msa1154820 | 0.804129 | 2.505670e-49 | -8.615850e-47 |
| Msa0647000 | Msa1154820 | 0.823639 | 1.242888e-53 | -8.615850e-47 |
| Msa0668090 | Msa1154820 | 0.818151 | 2.276227e-52 | -8.615850e-47 |
| Msa0691160 | Msa1154820 | 0.814003 | 1.922230e-51 | -8.615850e-47 |
| Msa0707780 | Msa1154820 | 0.803272 | 3.772788e-49 | -8.615850e-47 |
| Msa0715310 | Msa1154820 | 0.817043 | 4.045175e-52 | -8.615850e-47 |
| Msa0719340 | Msa1154820 | 0.801838 | 7.452723e-49 | -8.615850e-47 |
| Msa0725480 | Msa1154820 | -0.817568 | 3.083065e-52 | -8.615850e-47 |
| Msa0730180 | Msa1154820 | 0.808635 | 2.811288e-50 | -8.615850e-47 |
| Msa0744450 | Msa1154820 | 0.822115 | 2.814709e-53 | -8.615850e-47 |
| Msa0748610 | Msa1154820 | 0.811538 | 6.657971e-51 | -8.615850e-47 |
| Msa0752580 | Msa1154820 | 0.805494 | 1.299327e-49 | -8.615850e-47 |
| Msa0756480 | Msa1154820 | 0.837605 | 4.708952e-57 | -8.615850e-47 |
| Msa0757310 | Msa1154820 | 0.804652 | 1.949012e-49 | -8.615850e-47 |
| Msa0761640 | Msa1154820 | 0.803397 | 3.554399e-49 | -8.615850e-47 |
| Msa0766100 | Msa1154820 | -0.807421 | 5.095558e-50 | -8.615850e-47 |
| Msa0770430 | Msa1154820 | 0.819730 | 9.964080e-53 | -8.615850e-47 |
| Msa0772150 | Msa1154820 | 0.806726 | 7.151958e-50 | -8.615850e-47 |
| Msa0773610 | Msa1154820 | 0.801749 | 7.774937e-49 | -8.615850e-47 |
| Msa0792510 | Msa1154820 | 0.839357 | 1.662882e-57 | -8.615850e-47 |
| Msa0811000 | Msa1154820 | 0.811821 | 5.779263e-51 | -8.615850e-47 |
| Msa0811510 | Msa1154820 | 0.810114 | 1.353955e-50 | -8.615850e-47 |
| Msa0814780 | Msa1154820 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0830120 | Msa1154820 | 0.819286 | 1.258119e-52 | -8.615850e-47 |
| Msa0830450 | Msa1154820 | 0.819660 | 1.033748e-52 | -8.615850e-47 |
| Msa0830900 | Msa1154820 | 0.804389 | 2.211327e-49 | -8.615850e-47 |
| Msa0835510 | Msa1154820 | 0.827583 | 1.444186e-54 | -8.615850e-47 |
| Msa0842050 | Msa1154820 | 0.827282 | 1.705092e-54 | -8.615850e-47 |
| Msa0141550 | Msa1154820 | 0.800587 | 1.343896e-48 | -8.615850e-47 |
| Msa0141670 | Msa1154820 | 0.811139 | 8.129086e-51 | -8.615850e-47 |
| Msa0147550 | Msa1154820 | 0.801682 | 8.023798e-49 | -8.615850e-47 |
| Msa0159750 | Msa1154820 | 0.801008 | 1.102401e-48 | -8.615850e-47 |
| Msa0161680 | Msa1154820 | 0.823488 | 1.348261e-53 | -8.615850e-47 |
| Msa0170680 | Msa1154820 | 0.806706 | 7.219833e-50 | -8.615850e-47 |
| Msa0181090 | Msa1154820 | 0.807036 | 6.148353e-50 | -8.615850e-47 |
| Msa0208390 | Msa1154820 | 0.815509 | 8.915230e-52 | -8.615850e-47 |
| Msa0213080 | Msa1154820 | 0.852350 | 4.890340e-61 | -8.615850e-47 |
| Msa0217470 | Msa1154820 | 0.824842 | 6.484160e-54 | -8.615850e-47 |
| Msa0227500 | Msa1154820 | 0.805973 | 1.030498e-49 | -8.615850e-47 |
| Msa0227800 | Msa1154820 | 0.803405 | 3.541189e-49 | -8.615850e-47 |
| Msa0233190 | Msa1154820 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
| Msa0371610 | Msa1154820 | 0.837570 | 4.808870e-57 | -8.615850e-47 |
| Msa0405250 | Msa1154820 | -0.810827 | 9.497422e-51 | -8.615850e-47 |
| Msa0409820 | Msa1154820 | 0.855476 | 6.148280e-62 | -8.615850e-47 |
| Msa0413740 | Msa1154820 | 0.818939 | 1.508404e-52 | -8.615850e-47 |
| Msa0418000 | Msa1154820 | 0.822576 | 2.199858e-53 | -8.615850e-47 |
| Msa0420070 | Msa1154820 | 0.820553 | 6.453950e-53 | -8.615850e-47 |
| Msa0436450 | Msa1154820 | 0.801409 | 9.127354e-49 | -8.615850e-47 |
| Msa0437710 | Msa1154820 | 0.806214 | 9.168370e-50 | -8.615850e-47 |
| Msa0450460 | Msa1154820 | 0.816924 | 4.302336e-52 | -8.615850e-47 |
| Msa0455260 | Msa1154820 | 0.804107 | 2.531905e-49 | -8.615850e-47 |
| Msa0458790 | Msa1154820 | 0.809973 | 1.451719e-50 | -8.615850e-47 |
| Msa0466100 | Msa1154820 | 0.810204 | 1.294635e-50 | -8.615850e-47 |
| Msa0988510 | Msa1154820 | 0.806810 | 6.865107e-50 | -8.615850e-47 |
| Msa1009000 | Msa1154820 | 0.800969 | 1.123221e-48 | -8.615850e-47 |
| Msa1014350 | Msa1154820 | 0.830438 | 2.936958e-55 | -8.615850e-47 |
| Msa1018720 | Msa1154820 | 0.819730 | 9.961057e-53 | -8.615850e-47 |
| Msa1021770 | Msa1154820 | 0.803144 | 4.011389e-49 | -8.615850e-47 |
| Msa1027180 | Msa1154820 | 0.931842 | 2.074760e-94 | -8.615850e-47 |
| Msa1036390 | Msa1154820 | 0.807216 | 5.633424e-50 | -8.615850e-47 |
| Msa1044040 | Msa1154820 | 0.807760 | 4.319298e-50 | -8.615850e-47 |
| Msa1050490 | Msa1154820 | 0.807269 | 5.488891e-50 | -8.615850e-47 |
| Msa1054890 | Msa1154820 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa1064210 | Msa1154820 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa1072350 | Msa1154820 | 0.809235 | 2.091660e-50 | -8.615850e-47 |
| Msa1076680 | Msa1154820 | 0.808804 | 2.587165e-50 | -8.615850e-47 |
| Msa1080460 | Msa1154820 | 0.801661 | 8.106187e-49 | -8.615850e-47 |
| Msa1081600 | Msa1154820 | 0.810603 | 1.061890e-50 | -8.615850e-47 |
| Msa1093390 | Msa1154820 | 0.810657 | 1.033503e-50 | -8.615850e-47 |
| Msa1106560 | Msa1154820 | 0.829039 | 6.434764e-55 | -8.615850e-47 |
| Msa0260970 | Msa1154820 | 0.809517 | 1.819967e-50 | -8.615850e-47 |
| Msa0264940 | Msa1154820 | -0.803557 | 3.292753e-49 | -8.615850e-47 |
| Msa0269360 | Msa1154820 | 0.819803 | 9.584266e-53 | -8.615850e-47 |
| Msa0272420 | Msa1154820 | 0.801114 | 1.048786e-48 | -8.615850e-47 |
| Msa0296610 | Msa1154820 | 0.839001 | 2.056824e-57 | -8.615850e-47 |
| Msa0298940 | Msa1154820 | 0.821263 | 4.430555e-53 | -8.615850e-47 |
| Msa0298970 | Msa1154820 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0302990 | Msa1154820 | -0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0304990 | Msa1154820 | 0.826204 | 3.084526e-54 | -8.615850e-47 |
| Msa0321800 | Msa1154820 | 0.816624 | 5.024154e-52 | -8.615850e-47 |
| Msa0350020 | Msa1154820 | 0.825340 | 4.943973e-54 | -8.615850e-47 |
| Msa1113210 | Msa1154820 | 0.811217 | 7.816604e-51 | -8.615850e-47 |
| Msa1125040 | Msa1154820 | 0.805802 | 1.119436e-49 | -8.615850e-47 |
| Msa1138450 | Msa1154820 | 0.808339 | 3.251360e-50 | -8.615850e-47 |
| Msa1149760 | Msa1154820 | 0.818361 | 2.040863e-52 | -8.615850e-47 |
| Msa1151960 | Msa1154820 | 0.813664 | 2.282433e-51 | -8.615850e-47 |
| Msa1154820 | Msa1166370 | 0.815480 | 9.049920e-52 | -8.615850e-47 |
| Msa1154820 | Msa1167400 | 0.800412 | 1.458711e-48 | -8.615850e-47 |
| Msa1154820 | Msa1182830 | 0.807216 | 5.633631e-50 | -8.615850e-47 |
| Msa1154820 | Msa1186210 | 0.814508 | 1.486374e-51 | -8.615850e-47 |
| Msa1154820 | Msa1197370 | 0.849647 | 2.827746e-60 | -8.615850e-47 |
| Msa1154820 | Msa1201990 | 0.840107 | 1.061097e-57 | -8.615850e-47 |
| Msa1154820 | Msa1221200 | -0.818278 | 2.130721e-52 | -8.615850e-47 |
| Msa1154820 | Msa1221260 | 0.813080 | 3.067404e-51 | -8.615850e-47 |
| Msa1154820 | Msa1222580 | 0.800190 | 1.619114e-48 | -8.615850e-47 |
| Msa1154820 | Msa1223460 | 0.809967 | 1.456352e-50 | -8.615850e-47 |
| Msa1154820 | Msa1226600 | 0.807772 | 4.293303e-50 | -8.615850e-47 |
| Msa1154820 | Msa1233770 | 0.800165 | 1.637978e-48 | -8.615850e-47 |
| Msa1154820 | Msa1238480 | 0.819246 | 1.284677e-52 | -8.615850e-47 |
| Msa1154820 | Msa1254770 | 0.840952 | 6.376826e-58 | -8.615850e-47 |
| Msa1154820 | Msa1254800 | 0.837465 | 5.115945e-57 | -8.615850e-47 |
| Msa1154820 | Msa1264560 | 0.813901 | 2.023811e-51 | -8.615850e-47 |
| Msa1154820 | Msa1281720 | 0.807042 | 6.131109e-50 | -8.615850e-47 |
| Msa1154820 | Msa1283770 | 0.804647 | 1.953736e-49 | -8.615850e-47 |
| Msa1154820 | Msa1295010 | 0.823216 | 1.560983e-53 | -8.615850e-47 |
| Msa1154820 | Msa1298290 | 0.809464 | 1.867763e-50 | -8.615850e-47 |
| Msa1154820 | Msa1302150 | 0.833967 | 3.934125e-56 | -8.615850e-47 |
| Msa1154820 | Msa1310110 | 0.805399 | 1.360219e-49 | -8.615850e-47 |
| Msa1154820 | Msa1326000 | 0.839191 | 1.836020e-57 | -8.615850e-47 |
| Msa1154820 | Msa1329990 | 0.849248 | 3.652849e-60 | -8.615850e-47 |
| Msa1154820 | Msa1335770 | 0.800440 | 1.439637e-48 | -8.615850e-47 |
| Msa1154820 | Msa1337190 | 0.811715 | 6.095831e-51 | -8.615850e-47 |
| Msa1154820 | Msa1348480 | 0.823705 | 1.199524e-53 | -8.615850e-47 |
| Msa1154820 | Msa1355260 | 0.804107 | 2.531210e-49 | -8.615850e-47 |
| Msa1154820 | Msa1373950 | 0.843387 | 1.445664e-58 | -8.615850e-47 |
| Msa1154820 | Msa1379980 | 0.810339 | 1.210658e-50 | -8.615850e-47 |
| Msa1154820 | Msa1385620 | 0.804012 | 2.649784e-49 | -8.615850e-47 |
| Msa1154820 | Msa1385900 | 0.813537 | 2.434583e-51 | -8.615850e-47 |
| Msa1154820 | Msa1386020 | 0.801967 | 7.012633e-49 | -8.615850e-47 |
| Msa1154820 | Msa1397540 | 0.802091 | 6.613268e-49 | -8.615850e-47 |
| Msa1154820 | Msa1409750 | 0.800398 | 1.468574e-48 | -8.615850e-47 |
| Msa1154820 | Msa1412520 | 0.816499 | 5.358459e-52 | -8.615850e-47 |
| Msa1154820 | Msa1418200 | 0.826408 | 2.758109e-54 | -8.615850e-47 |
| Msa1154820 | Msa1423080 | 0.812819 | 3.499008e-51 | -8.615850e-47 |
| Msa1154820 | Msa1430760 | 0.806954 | 6.399675e-50 | -8.615850e-47 |
| Msa1154820 | Msa1435670 | 0.815456 | 9.159542e-52 | -8.615850e-47 |
| Msa1154820 | Msa1447160 | -0.808527 | 2.964130e-50 | -8.615850e-47 |
| Msa1154820 | Msa1447440 | 0.811023 | 8.614069e-51 | -8.615850e-47 |
| Msa1154820 | Msa1460310 | -0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa1154820 | Msa1465900 | 0.821249 | 4.463880e-53 | -8.615850e-47 |
| Msa0502500 | Msa1154820 | 0.820469 | 6.748354e-53 | -8.615850e-47 |
| Msa0505390 | Msa1154820 | 0.816580 | 5.138475e-52 | -8.615850e-47 |
| Msa0509970 | Msa1154820 | 0.813618 | 2.336977e-51 | -8.615850e-47 |
| Msa0524050 | Msa1154820 | 0.815244 | 1.021010e-51 | -8.615850e-47 |
| Msa0525240 | Msa1154820 | 0.802941 | 4.417433e-49 | -8.615850e-47 |
| Msa0530930 | Msa1154820 | 0.800966 | 1.124783e-48 | -8.615850e-47 |
| Msa0535020 | Msa1154820 | 0.800731 | 1.255707e-48 | -8.615850e-47 |
| Msa0535050 | Msa1154820 | 0.802079 | 6.650334e-49 | -8.615850e-47 |
| Msa0542010 | Msa1154820 | 0.826210 | 3.073870e-54 | -8.615850e-47 |
| Msa0575250 | Msa1154820 | 0.829045 | 6.412629e-55 | -8.615850e-47 |
| Msa0576420 | Msa1154820 | 0.805682 | 1.186338e-49 | -8.615850e-47 |
| Msa0581340 | Msa1154820 | 0.814366 | 1.598494e-51 | -8.615850e-47 |
| Msa0589600 | Msa1154820 | 0.818573 | 1.826581e-52 | -8.615850e-47 |
| Msa0591780 | Msa1154820 | 0.835740 | 1.406966e-56 | -8.615850e-47 |
| Msa0598250 | Msa1154820 | 0.814158 | 1.776416e-51 | -8.615850e-47 |
| Msa0599250 | Msa1154820 | 0.822588 | 2.185591e-53 | -8.615850e-47 |
| Msa0854570 | Msa1154820 | 0.800503 | 1.398022e-48 | -8.615850e-47 |
| Msa0862020 | Msa1154820 | 0.809892 | 1.511771e-50 | -8.615850e-47 |
| Msa0864950 | Msa1154820 | 0.829784 | 4.241833e-55 | -8.615850e-47 |
| Msa0875630 | Msa1154820 | 0.802742 | 4.855007e-49 | -8.615850e-47 |
| Msa0880080 | Msa1154820 | 0.813994 | 1.930564e-51 | -8.615850e-47 |
| Msa0890250 | Msa1154820 | 0.803814 | 2.913079e-49 | -8.615850e-47 |
| Msa0894890 | Msa1154820 | 0.808936 | 2.423767e-50 | -8.615850e-47 |
| Msa0902980 | Msa1154820 | 0.802449 | 5.580270e-49 | -8.615850e-47 |
| Msa0903730 | Msa1154820 | 0.802063 | 6.701028e-49 | -8.615850e-47 |
| Msa0937940 | Msa1154820 | 0.809818 | 1.568092e-50 | -8.615850e-47 |
| Msa0947410 | Msa1154820 | 0.948815 | 4.457143e-107 | -8.615850e-47 |
| Msa0951720 | Msa1154820 | 0.802552 | 5.314750e-49 | -8.615850e-47 |
| Msa0960270 | Msa1154820 | 0.829165 | 5.996805e-55 | -8.615850e-47 |
| Msa0970050 | Msa1154820 | 0.816869 | 4.427889e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 136 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTAACCTTTGGTTTATT+TGG | 0.128006 | 7_4:-42541491 | Msa1154820:three_prime_UTR |
| AAGAAAGCACCTGTTATTTA+TGG | 0.167139 | 7_4:-42540758 | Msa1154820:three_prime_UTR |
| AAGAAAGCACCTGTTATTTA+TGG | 0.167139 | 7_4:-42542721 | Msa1154820:CDS |
| GAAATAGCTCCATTTATATA+AGG | 0.225284 | 7_4:-42539703 | Msa1154820:three_prime_UTR |
| GAAATAGCTCCATTTATATA+AGG | 0.225284 | 7_4:-42541666 | Msa1154820:three_prime_UTR |
| AATCAAAACCCTTATATAAA+TGG | 0.239371 | 7_4:+42539694 | None:intergenic |
| CATCAAAACCCTTATATAAA+TGG | 0.245570 | 7_4:+42541657 | None:intergenic |
| AAAATTTCTCGGGCTTTATA+TGG | 0.250180 | 7_4:-42540086 | Msa1154820:three_prime_UTR |
| AAAATTTCTCGGGCTTTATA+TGG | 0.250180 | 7_4:-42542049 | Msa1154820:three_prime_UTR |
| AGAGCTACTCATCAAATTTC+AGG | 0.270993 | 7_4:+42540725 | None:intergenic |
| AGAGCTACTCATCAAATTTC+AGG | 0.270993 | 7_4:+42542688 | None:intergenic |
| AGTTTAGAATCATATGTTAA+TGG | 0.295118 | 7_4:-42541533 | Msa1154820:three_prime_UTR |
| GCAGATCACCTGGTCTTAAA+TGG | 0.311454 | 7_4:-42539881 | Msa1154820:three_prime_UTR |
| GCAGATCACCTGGTCTTAAA+TGG | 0.311454 | 7_4:-42541844 | Msa1154820:three_prime_UTR |
| TTACATATCTTGTATAGAAT+TGG | 0.314853 | 7_4:-42540289 | Msa1154820:three_prime_UTR |
| TTACATATCTTGTATAGAAT+TGG | 0.314853 | 7_4:-42542252 | Msa1154820:three_prime_UTR |
| AATAAATAATTAAAATTTCT+CGG | 0.342425 | 7_4:-42540097 | Msa1154820:three_prime_UTR |
| AATAAATAATTAAAATTTCT+CGG | 0.342425 | 7_4:-42542060 | Msa1154820:three_prime_UTR |
| ATTACATAAAGGAGAGAATA+TGG | 0.343599 | 7_4:-42540793 | Msa1154820:three_prime_UTR |
| ATTACATAAAGGAGAGAATA+TGG | 0.343599 | 7_4:-42542756 | Msa1154820:CDS |
| GGGAGAACTTGAAAGGAAAA+TGG | 0.365336 | 7_4:-42541332 | Msa1154820:three_prime_UTR |
| CAAGATACTGCCATTGAACT+TGG | 0.379589 | 7_4:-42545561 | Msa1154820:CDS |
| AGAAAGCACCTGTTATTTAT+GGG | 0.379944 | 7_4:-42540757 | Msa1154820:three_prime_UTR |
| AGAAAGCACCTGTTATTTAT+GGG | 0.379944 | 7_4:-42542720 | Msa1154820:CDS |
| AAATAGCTCCATTTATATAA+GGG | 0.383955 | 7_4:-42539702 | Msa1154820:three_prime_UTR |
| AAATAGCTCCATTTATATAA+GGG | 0.383955 | 7_4:-42541665 | Msa1154820:three_prime_UTR |
| GCTTTCTTCCCATAAATAAC+AGG | 0.391981 | 7_4:+42540749 | None:intergenic |
| GCTTTCTTCCCATAAATAAC+AGG | 0.391981 | 7_4:+42542712 | None:intergenic |
| ATAAATAATTAAAATTTCTC+GGG | 0.419506 | 7_4:-42540096 | Msa1154820:three_prime_UTR |
| ATAAATAATTAAAATTTCTC+GGG | 0.419506 | 7_4:-42542059 | Msa1154820:three_prime_UTR |
| TAATCTGGCTTAACATAGAA+AGG | 0.421828 | 7_4:-42540007 | Msa1154820:three_prime_UTR |
| TAATCTGGCTTAACATAGAA+AGG | 0.421828 | 7_4:-42541970 | Msa1154820:three_prime_UTR |
| CCATCATTATTTCTAAGAAT+AGG | 0.428755 | 7_4:+42539820 | None:intergenic |
| CCATCATTATTTCTAAGAAT+AGG | 0.428755 | 7_4:+42541783 | None:intergenic |
| GATAACAAAGGATTACATAA+AGG | 0.436486 | 7_4:-42540804 | Msa1154820:three_prime_UTR |
| GATAACAAAGGATTACATAA+AGG | 0.436486 | 7_4:-42542767 | Msa1154820:CDS |
| TTCAGCTGGATGGCATGATA+AGG | 0.436569 | 7_4:-42540160 | Msa1154820:three_prime_UTR |
| TTCAGCTGGATGGCATGATA+AGG | 0.436569 | 7_4:-42542123 | Msa1154820:three_prime_UTR |
| GGCTTTATATGGAGAAGGTA+AGG | 0.443686 | 7_4:-42540075 | Msa1154820:three_prime_UTR |
| GGCTTTATATGGAGAAGGTA+AGG | 0.443686 | 7_4:-42542038 | Msa1154820:three_prime_UTR |
| GCAAGTGGTGAACTCTAAAC+AGG | 0.462787 | 7_4:+42540701 | None:intergenic |
| GCAAGTGGTGAACTCTAAAC+AGG | 0.462787 | 7_4:+42542664 | None:intergenic |
| CCTATTCTTAGAAATAATGA+TGG | 0.465042 | 7_4:-42539820 | Msa1154820:three_prime_UTR |
| CCTATTCTTAGAAATAATGA+TGG | 0.465042 | 7_4:-42541783 | Msa1154820:three_prime_UTR |
| AAGGAGAGAATATGGCATAA+AGG | 0.466216 | 7_4:-42540785 | Msa1154820:three_prime_UTR |
| AAGGAGAGAATATGGCATAA+AGG | 0.466216 | 7_4:-42542748 | Msa1154820:CDS |
| TACAATGATATAGGAGATTG+TGG | 0.467972 | 7_4:-42540831 | Msa1154820:intron |
| TACAATGATATAGGAGATTG+TGG | 0.467972 | 7_4:-42542794 | Msa1154820:intron |
| AATAATGATGGGTTATTAAG+CGG | 0.473078 | 7_4:-42539808 | Msa1154820:three_prime_UTR |
| AATAATGATGGGTTATTAAG+CGG | 0.473078 | 7_4:-42541771 | Msa1154820:three_prime_UTR |
| TGATCTAAAATTGATGATAC+AGG | 0.475870 | 7_4:+42540221 | None:intergenic |
| TGATCTAAAATTGATGATAC+AGG | 0.475870 | 7_4:+42542184 | None:intergenic |
| TAATTCATTTCCAAGTTCAA+TGG | 0.482603 | 7_4:+42545551 | None:intergenic |
| AATGCTATTGAATATACAAA+TGG | 0.489437 | 7_4:-42540341 | Msa1154820:three_prime_UTR |
| AATGCTATTGAATATACAAA+TGG | 0.489437 | 7_4:-42542304 | Msa1154820:three_prime_UTR |
| AAACTGCTAGCAAACTATGA+AGG | 0.493697 | 7_4:-42540185 | Msa1154820:three_prime_UTR |
| AAACTGCTAGCAAACTATGA+AGG | 0.493697 | 7_4:-42542148 | Msa1154820:three_prime_UTR |
| TCAGCTGGATGGCATGATAA+GGG | 0.496675 | 7_4:-42540159 | Msa1154820:three_prime_UTR |
| TCAGCTGGATGGCATGATAA+GGG | 0.496675 | 7_4:-42542122 | Msa1154820:three_prime_UTR |
| GCGGCAGAGGGCAGAAGGTG+TGG | 0.498337 | 7_4:+42539948 | None:intergenic |
| GCGGCAGAGGGCAGAAGGTG+TGG | 0.498337 | 7_4:+42541911 | None:intergenic |
| AGAAGGCGGCAGAGGGCAGA+AGG | 0.499716 | 7_4:+42539943 | None:intergenic |
| AGAAGGCGGCAGAGGGCAGA+AGG | 0.499716 | 7_4:+42541906 | None:intergenic |
| CCATGCACTGCTTGTAGTTG+AGG | 0.507435 | 7_4:-42541353 | Msa1154820:three_prime_UTR |
| CAAAGAGGCAAGAAATTACA+TGG | 0.507736 | 7_4:-42540366 | Msa1154820:three_prime_UTR |
| CAAAGAGGCAAGAAATTACA+TGG | 0.507736 | 7_4:-42542329 | Msa1154820:intron |
| GCATAGAGATAAAAGACATC+AGG | 0.513472 | 7_4:+42541465 | None:intergenic |
| GTTCACCACTTGCATGATCA+AGG | 0.514280 | 7_4:-42540691 | Msa1154820:intron |
| GTTCACCACTTGCATGATCA+AGG | 0.514280 | 7_4:-42542654 | Msa1154820:intron |
| AAACTATGAAGGGCTTCAGC+TGG | 0.519080 | 7_4:-42540174 | Msa1154820:three_prime_UTR |
| AAACTATGAAGGGCTTCAGC+TGG | 0.519080 | 7_4:-42542137 | Msa1154820:three_prime_UTR |
| AAGCAACTGTTTCGCTGATG+TGG | 0.519623 | 7_4:+42539727 | None:intergenic |
| AAGCAACTGTTTCGCTGATG+TGG | 0.519623 | 7_4:+42541690 | None:intergenic |
| GGTGAGAAGTGCAGATCACC+TGG | 0.524126 | 7_4:-42539891 | Msa1154820:three_prime_UTR |
| GGTGAGAAGTGCAGATCACC+TGG | 0.524126 | 7_4:-42541854 | Msa1154820:three_prime_UTR |
| TGCACTATAAAGGACTTTGT+AGG | 0.524335 | 7_4:+42541397 | None:intergenic |
| CATGCACTGCTTGTAGTTGA+GGG | 0.524405 | 7_4:-42541352 | Msa1154820:three_prime_UTR |
| GGATTGTCAGAAGGCGGCAG+AGG | 0.525146 | 7_4:+42539935 | None:intergenic |
| GGATTGTCAGAAGGCGGCAG+AGG | 0.525146 | 7_4:+42541898 | None:intergenic |
| TATGCAGTTTAGCACTCTCA+TGG | 0.532297 | 7_4:+42541297 | None:intergenic |
| GTCCCAATGAGAAAAGTTGT+TGG | 0.539840 | 7_4:-42540264 | Msa1154820:three_prime_UTR |
| GTCCCAATGAGAAAAGTTGT+TGG | 0.539840 | 7_4:-42542227 | Msa1154820:three_prime_UTR |
| TCTCGGGCTTTATATGGAGA+AGG | 0.541439 | 7_4:-42540080 | Msa1154820:three_prime_UTR |
| TCTCGGGCTTTATATGGAGA+AGG | 0.541439 | 7_4:-42542043 | Msa1154820:three_prime_UTR |
| CTATTCTTAGAAATAATGAT+GGG | 0.545280 | 7_4:-42539819 | Msa1154820:three_prime_UTR |
| CTATTCTTAGAAATAATGAT+GGG | 0.545280 | 7_4:-42541782 | Msa1154820:three_prime_UTR |
| GATTGTCAGAAGGCGGCAGA+GGG | 0.550966 | 7_4:+42539936 | None:intergenic |
| GATTGTCAGAAGGCGGCAGA+GGG | 0.550966 | 7_4:+42541899 | None:intergenic |
| TGATTTGGCCATTTAAGACC+AGG | 0.558051 | 7_4:+42539873 | None:intergenic |
| TGATTTGGCCATTTAAGACC+AGG | 0.558051 | 7_4:+42541836 | None:intergenic |
| TGATAAGGGTTCAAGTAGGA+TGG | 0.559261 | 7_4:-42540145 | Msa1154820:three_prime_UTR |
| TGATAAGGGTTCAAGTAGGA+TGG | 0.559261 | 7_4:-42542108 | Msa1154820:three_prime_UTR |
| ATAATGATGGGTTATTAAGC+GGG | 0.567133 | 7_4:-42539807 | Msa1154820:three_prime_UTR |
| ATAATGATGGGTTATTAAGC+GGG | 0.567133 | 7_4:-42541770 | Msa1154820:three_prime_UTR |
| AACTGCTAGCAAACTATGAA+GGG | 0.574265 | 7_4:-42540184 | Msa1154820:three_prime_UTR |
| AACTGCTAGCAAACTATGAA+GGG | 0.574265 | 7_4:-42542147 | Msa1154820:three_prime_UTR |
| TAGTTGAGGGAGAACTTGAA+AGG | 0.576662 | 7_4:-42541339 | Msa1154820:three_prime_UTR |
| TATGAAGGGCTTCAGCTGGA+TGG | 0.585494 | 7_4:-42540170 | Msa1154820:three_prime_UTR |
| TATGAAGGGCTTCAGCTGGA+TGG | 0.585494 | 7_4:-42542133 | Msa1154820:three_prime_UTR |
| TGAGACAAAGTTCAAGAGGG+TGG | 0.589004 | 7_4:-42545619 | Msa1154820:CDS |
| ATAATGAGACAAAGTTCAAG+AGG | 0.589640 | 7_4:-42545623 | Msa1154820:CDS |
| TGTAGAATGAAAATAATGGT+AGG | 0.594513 | 7_4:-42546336 | None:intergenic |
| GAGACAAAGTTCAAGAGGGT+GGG | 0.600020 | 7_4:-42545618 | Msa1154820:CDS |
| CATAGAAAGGCTTTATACGA+GGG | 0.610134 | 7_4:-42539994 | Msa1154820:three_prime_UTR |
| CATAGAAAGGCTTTATACGA+GGG | 0.610134 | 7_4:-42541957 | Msa1154820:three_prime_UTR |
| CCTCAACTACAAGCAGTGCA+TGG | 0.615241 | 7_4:+42541353 | None:intergenic |
| AGCCTGTGTGGATTGTCAGA+AGG | 0.620100 | 7_4:+42539926 | None:intergenic |
| AGCCTGTGTGGATTGTCAGA+AGG | 0.620100 | 7_4:+42541889 | None:intergenic |
| GCTTTATATGGAGAAGGTAA+GGG | 0.623958 | 7_4:-42540074 | Msa1154820:three_prime_UTR |
| GCTTTATATGGAGAAGGTAA+GGG | 0.623958 | 7_4:-42542037 | Msa1154820:three_prime_UTR |
| ACACAGGCTGATCATCCACT+TGG | 0.630161 | 7_4:-42539912 | Msa1154820:three_prime_UTR |
| ACACAGGCTGATCATCCACT+TGG | 0.630161 | 7_4:-42541875 | Msa1154820:three_prime_UTR |
| CCTACGGATTGGAGACAAAG+AGG | 0.633033 | 7_4:-42540381 | Msa1154820:intron |
| CTATAAAGGACTTTGTAGGA+AGG | 0.633687 | 7_4:+42541401 | None:intergenic |
| CGCCTTCTGACAATCCACAC+AGG | 0.642397 | 7_4:-42539928 | Msa1154820:three_prime_UTR |
| CGCCTTCTGACAATCCACAC+AGG | 0.642397 | 7_4:-42541891 | Msa1154820:three_prime_UTR |
| CAGGCATCCAAATAAACCAA+AGG | 0.642435 | 7_4:+42541484 | None:intergenic |
| CTGTGTGGATTGTCAGAAGG+CGG | 0.647153 | 7_4:+42539929 | None:intergenic |
| CTGTGTGGATTGTCAGAAGG+CGG | 0.647153 | 7_4:+42541892 | None:intergenic |
| GATTGTGGTAAAGATAACAA+AGG | 0.647801 | 7_4:-42540816 | Msa1154820:three_prime_UTR |
| GATTGTGGTAAAGATAACAA+AGG | 0.647801 | 7_4:-42542779 | Msa1154820:CDS |
| ACATAGAAAGGCTTTATACG+AGG | 0.656319 | 7_4:-42539995 | Msa1154820:three_prime_UTR |
| ACATAGAAAGGCTTTATACG+AGG | 0.656319 | 7_4:-42541958 | Msa1154820:three_prime_UTR |
| TCTAAAATTGATGATACAGG+TGG | 0.658257 | 7_4:+42540224 | None:intergenic |
| TCTAAAATTGATGATACAGG+TGG | 0.658257 | 7_4:+42542187 | None:intergenic |
| TAATGAGACAAAGTTCAAGA+GGG | 0.659889 | 7_4:-42545622 | Msa1154820:CDS |
| TATCTTGATAGCTACTCGCA+AGG | 0.663358 | 7_4:+42545577 | None:intergenic |
| GGCATGATAAGGGTTCAAGT+AGG | 0.663612 | 7_4:-42540149 | Msa1154820:three_prime_UTR |
| GGCATGATAAGGGTTCAAGT+AGG | 0.663612 | 7_4:-42542112 | Msa1154820:three_prime_UTR |
| GATTACCTTGATCATGCAAG+TGG | 0.664617 | 7_4:+42540686 | None:intergenic |
| GATTACCTTGATCATGCAAG+TGG | 0.664617 | 7_4:+42542649 | None:intergenic |
| GATCTGCACTTCTCACCAAG+TGG | 0.671647 | 7_4:+42539897 | None:intergenic |
| GATCTGCACTTCTCACCAAG+TGG | 0.671647 | 7_4:+42541860 | None:intergenic |
| AAGTGGATGATCAGCCTGTG+TGG | 0.676233 | 7_4:+42539914 | None:intergenic |
| AAGTGGATGATCAGCCTGTG+TGG | 0.676233 | 7_4:+42541877 | None:intergenic |
| TAAACTGCATAACTGACATG+AGG | 0.683458 | 7_4:-42541285 | Msa1154820:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTAAAATTTATTTTGAA+AGG | + | chr7_4:42543588-42543607 | None:intergenic | 10.0% |
| !! | ATAAATAATTAAAATTTCTC+GGG | - | chr7_4:42543954-42543973 | Msa1154820:intron | 10.0% |
| !!! | AATATTTTTAATTCTTGATT+TGG | + | chr7_4:42544195-42544214 | None:intergenic | 10.0% |
| !!! | TTTGTTTAAAGTTTTTAATA+GGG | + | chr7_4:42544274-42544293 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAAAGTTTTTAAT+AGG | + | chr7_4:42544275-42544294 | None:intergenic | 10.0% |
| !!! | AGTTTAAAATTTATTTTGAA+AGG | + | chr7_4:42543588-42543607 | None:intergenic | 10.0% |
| !! | ATAAATAATTAAAATTTCTC+GGG | - | chr7_4:42543954-42543973 | Msa1154820:intron | 10.0% |
| !!! | AATATTTTTAATTCTTGATT+TGG | + | chr7_4:42544195-42544214 | None:intergenic | 10.0% |
| !!! | TTTGTTTAAAGTTTTTAATA+GGG | + | chr7_4:42544274-42544293 | None:intergenic | 10.0% |
| !!! | TTTTGTTTAAAGTTTTTAAT+AGG | + | chr7_4:42544275-42544294 | None:intergenic | 10.0% |
| !!! | GAATTTTATACTTAACTAAT+TGG | - | chr7_4:42539810-42539829 | Msa1154820:three_prime_UTR | 15.0% |
| !! | ATGACTATTAAAATATTGTA+TGG | + | chr7_4:42540046-42540065 | None:intergenic | 15.0% |
| !! | ATGTCATATTTATATACAAA+TGG | + | chr7_4:42540107-42540126 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTTTTTGATG+TGG | - | chr7_4:42540568-42540587 | Msa1154820:intron | 15.0% |
| !!! | TTTTGTTTTTTTTTTGATGT+GGG | - | chr7_4:42540569-42540588 | Msa1154820:intron | 15.0% |
| !!! | TTTTATCAATTGAGATTTTT+TGG | - | chr7_4:42540760-42540779 | Msa1154820:three_prime_UTR | 15.0% |
| !!! | TTTTGATTTGTTTTGATATA+TGG | - | chr7_4:42540835-42540854 | Msa1154820:intron | 15.0% |
| !! | TCTTAATCTATAAAAATTTG+CGG | - | chr7_4:42541068-42541087 | Msa1154820:intron | 15.0% |
| !!! | TATTATTTTTAGCTTGAATA+TGG | - | chr7_4:42541352-42541371 | Msa1154820:three_prime_UTR | 15.0% |
| !! | ATTATTAAGAGATAAAATAG+AGG | - | chr7_4:42541550-42541569 | Msa1154820:three_prime_UTR | 15.0% |
| !!! | ACTTAAAAAAATGAAAGTAT+TGG | + | chr7_4:42541914-42541933 | None:intergenic | 15.0% |
| !! | TATAGTAAAAATTTCATTGT+AGG | - | chr7_4:42542018-42542037 | Msa1154820:three_prime_UTR | 15.0% |
| !!! | TTATGAATAAAGTATTTAAG+TGG | - | chr7_4:42542148-42542167 | Msa1154820:three_prime_UTR | 15.0% |
| !! | TGAAATTTAAATATGATCTA+TGG | + | chr7_4:42542852-42542871 | None:intergenic | 15.0% |
| !!! | GATTACATTTTTGTTTTTTA+CGG | - | chr7_4:42544013-42544032 | Msa1154820:intron | 15.0% |
| !!! | ATTACATTTTTGTTTTTTAC+GGG | - | chr7_4:42544014-42544033 | Msa1154820:intron | 15.0% |
| !! | TGAAATTTAAATATGATCTA+TGG | + | chr7_4:42542852-42542871 | None:intergenic | 15.0% |
| !!! | GATTACATTTTTGTTTTTTA+CGG | - | chr7_4:42544013-42544032 | Msa1154820:intron | 15.0% |
| !!! | ATTACATTTTTGTTTTTTAC+GGG | - | chr7_4:42544014-42544033 | Msa1154820:intron | 15.0% |
| !!! | GTGTTATTTTCAATTACTTT+TGG | - | chr7_4:42540278-42540297 | Msa1154820:three_prime_UTR | 20.0% |
| !! | ACAAAATTTAGAAATACTCA+TGG | + | chr7_4:42540327-42540346 | None:intergenic | 20.0% |
| !! | GAGAAAAAAACTTAATATGA+GGG | + | chr7_4:42540512-42540531 | None:intergenic | 20.0% |
| !! | AGAGAAAAAAACTTAATATG+AGG | + | chr7_4:42540513-42540532 | None:intergenic | 20.0% |
| !! | ATGCAAAAAAGAAAAGTAAA+AGG | + | chr7_4:42540698-42540717 | None:intergenic | 20.0% |
| !! | TATTACAAAGATAAGTAAGA+TGG | - | chr7_4:42540933-42540952 | Msa1154820:intron | 20.0% |
| !! | ATCGTTTAAATCATAATTTC+TGG | - | chr7_4:42541020-42541039 | Msa1154820:intron | 20.0% |
| !! | CTTAATCTATAAAAATTTGC+GGG | - | chr7_4:42541069-42541088 | Msa1154820:intron | 20.0% |
| !! | TGTTTAGATAAACAAAATAC+TGG | - | chr7_4:42541250-42541269 | Msa1154820:intron | 20.0% |
| !!! | TATGGTTTTTGATTGTTTTA+TGG | - | chr7_4:42541370-42541389 | Msa1154820:intron | 20.0% |
| !!! | TTAAGGTATAACATCTTTTT+TGG | + | chr7_4:42541701-42541720 | None:intergenic | 20.0% |
| !! | AGAAAATGAAGATGTTAAAT+AGG | - | chr7_4:42541853-42541872 | Msa1154820:three_prime_UTR | 20.0% |
| !! | AATTAATCAAAATCCAAGTT+AGG | + | chr7_4:42542391-42542410 | None:intergenic | 20.0% |
| !!! | AGTTTAGAATCATATGTTAA+TGG | - | chr7_4:42542517-42542536 | Msa1154820:intron | 20.0% |
| !!! | AAAATTTTCTATGTAACCTT+TGG | - | chr7_4:42542550-42542569 | Msa1154820:intron | 20.0% |
| !! | TCACTAAAAATATACCAAAT+TGG | + | chr7_4:42542802-42542821 | None:intergenic | 20.0% |
| !! | TTACTACCAATAAACAATTT+GGG | + | chr7_4:42543043-42543062 | None:intergenic | 20.0% |
| !! | ATTACTACCAATAAACAATT+TGG | + | chr7_4:42543044-42543063 | None:intergenic | 20.0% |
| !!! | CTGAAATTTTACAATGATAT+AGG | - | chr7_4:42543210-42543229 | Msa1154820:intron | 20.0% |
| !!! | TTTTAATTTTTATGCAACCA+AGG | + | chr7_4:42543533-42543552 | None:intergenic | 20.0% |
| !! | AATGCTATTGAATATACAAA+TGG | - | chr7_4:42543709-42543728 | Msa1154820:intron | 20.0% |
| !! | TTACATATCTTGTATAGAAT+TGG | - | chr7_4:42543761-42543780 | Msa1154820:intron | 20.0% |
| !!! | TTACATTTTTGTTTTTTACG+GGG | - | chr7_4:42544015-42544034 | Msa1154820:intron | 20.0% |
| !! | CTATTCTTAGAAATAATGAT+GGG | - | chr7_4:42544231-42544250 | Msa1154820:intron | 20.0% |
| !! | AAATAGCTCCATTTATATAA+GGG | - | chr7_4:42544348-42544367 | Msa1154820:intron | 20.0% |
| !!! | AGTTTAGAATCATATGTTAA+TGG | - | chr7_4:42542517-42542536 | Msa1154820:intron | 20.0% |
| !!! | AAAATTTTCTATGTAACCTT+TGG | - | chr7_4:42542550-42542569 | Msa1154820:intron | 20.0% |
| !! | TCACTAAAAATATACCAAAT+TGG | + | chr7_4:42542802-42542821 | None:intergenic | 20.0% |
| !! | TTACTACCAATAAACAATTT+GGG | + | chr7_4:42543043-42543062 | None:intergenic | 20.0% |
| !! | ATTACTACCAATAAACAATT+TGG | + | chr7_4:42543044-42543063 | None:intergenic | 20.0% |
| !!! | CTGAAATTTTACAATGATAT+AGG | - | chr7_4:42543210-42543229 | Msa1154820:intron | 20.0% |
| !!! | TTTTAATTTTTATGCAACCA+AGG | + | chr7_4:42543533-42543552 | None:intergenic | 20.0% |
| !! | AATGCTATTGAATATACAAA+TGG | - | chr7_4:42543709-42543728 | Msa1154820:intron | 20.0% |
| !! | TTACATATCTTGTATAGAAT+TGG | - | chr7_4:42543761-42543780 | Msa1154820:intron | 20.0% |
| !!! | TTACATTTTTGTTTTTTACG+GGG | - | chr7_4:42544015-42544034 | Msa1154820:intron | 20.0% |
| !! | CTATTCTTAGAAATAATGAT+GGG | - | chr7_4:42544231-42544250 | Msa1154820:intron | 20.0% |
| !! | AAATAGCTCCATTTATATAA+GGG | - | chr7_4:42544348-42544367 | Msa1154820:intron | 20.0% |
| !! | AATCAAAACCCTTATATAAA+TGG | + | chr7_4:42546322-42546341 | None:intergenic | 20.0% |
| ! | CTTTATGCTTGATTCAAATT+AGG | - | chr7_4:42539771-42539790 | Msa1154820:three_prime_UTR | 25.0% |
| ! | TCAAATTAGGTTATGTAGTT+AGG | - | chr7_4:42539784-42539803 | Msa1154820:three_prime_UTR | 25.0% |
| ! | CAAATTAGGTTATGTAGTTA+GGG | - | chr7_4:42539785-42539804 | Msa1154820:three_prime_UTR | 25.0% |
| ! | AAGTACTTCCATTAAATTGT+CGG | + | chr7_4:42540237-42540256 | None:intergenic | 25.0% |
| ! | TAATTCATTTCCAAGTTCAA+TGG | + | chr7_4:42540465-42540484 | None:intergenic | 25.0% |
| ! | ATTCCTTTGTAAATTTCAGT+TGG | - | chr7_4:42540631-42540650 | Msa1154820:intron | 25.0% |
| ! | TTCCTTTGTAAATTTCAGTT+GGG | - | chr7_4:42540632-42540651 | Msa1154820:intron | 25.0% |
| ! | AAAAGGTTTGACATGAAAAA+TGG | + | chr7_4:42540681-42540700 | None:intergenic | 25.0% |
| ! | TCTCTAAATTGACAAGTTTA+AGG | + | chr7_4:42541718-42541737 | None:intergenic | 25.0% |
| ! | TTAAACTTGTCAATTTAGAG+AGG | - | chr7_4:42541717-42541736 | Msa1154820:three_prime_UTR | 25.0% |
| ! | TATCATATGCCTTCATAATA+CGG | - | chr7_4:42541743-42541762 | Msa1154820:three_prime_UTR | 25.0% |
| ! | ATCTCATATCTAATCTTTCA+TGG | - | chr7_4:42541964-42541983 | Msa1154820:three_prime_UTR | 25.0% |
| ! | ATGAAAGGATTCATAATCTT+TGG | - | chr7_4:42542242-42542261 | Msa1154820:three_prime_UTR | 25.0% |
| !! | TATGTAACCTTTGGTTTATT+TGG | - | chr7_4:42542559-42542578 | Msa1154820:intron | 25.0% |
| !!! | AGGTAATAAAAGTACCAATT+TGG | - | chr7_4:42542785-42542804 | Msa1154820:intron | 25.0% |
| ! | GATAACAAAGGATTACATAA+AGG | - | chr7_4:42543246-42543265 | Msa1154820:intron | 25.0% |
| ! | ATTACATAAAGGAGAGAATA+TGG | - | chr7_4:42543257-42543276 | Msa1154820:intron | 25.0% |
| ! | AAAGGATCATATGATATGTT+GGG | + | chr7_4:42543399-42543418 | None:intergenic | 25.0% |
| ! | AAAAGGATCATATGATATGT+TGG | + | chr7_4:42543400-42543419 | None:intergenic | 25.0% |
| ! | AGTAAATTGAATTGGACAAA+AGG | + | chr7_4:42543417-42543436 | None:intergenic | 25.0% |
| ! | AGTTCTACATAATTGAAGTT+TGG | + | chr7_4:42543489-42543508 | None:intergenic | 25.0% |
| !!! | TTCTAATTGTTGTGTTGTTT+TGG | - | chr7_4:42543619-42543638 | Msa1154820:intron | 25.0% |
| !! | TGATCTAAAATTGATGATAC+AGG | + | chr7_4:42543832-42543851 | None:intergenic | 25.0% |
| !!! | CCATCATTATTTCTAAGAAT+AGG | + | chr7_4:42544233-42544252 | None:intergenic | 25.0% |
| ! | CCTATTCTTAGAAATAATGA+TGG | - | chr7_4:42544230-42544249 | Msa1154820:intron | 25.0% |
| !!! | AATAATGATGGGTTATTAAG+CGG | - | chr7_4:42544242-42544261 | Msa1154820:intron | 25.0% |
| !! | TTAAAGTTTTTAATAGGGAG+TGG | + | chr7_4:42544269-42544288 | None:intergenic | 25.0% |
| ! | GAAATAGCTCCATTTATATA+AGG | - | chr7_4:42544347-42544366 | Msa1154820:intron | 25.0% |
| ! | CATCAAAACCCTTATATAAA+TGG | + | chr7_4:42544359-42544378 | None:intergenic | 25.0% |
| !! | TATGTAACCTTTGGTTTATT+TGG | - | chr7_4:42542559-42542578 | Msa1154820:intron | 25.0% |
| !!! | AGGTAATAAAAGTACCAATT+TGG | - | chr7_4:42542785-42542804 | Msa1154820:intron | 25.0% |
| ! | GATAACAAAGGATTACATAA+AGG | - | chr7_4:42543246-42543265 | Msa1154820:intron | 25.0% |
| ! | ATTACATAAAGGAGAGAATA+TGG | - | chr7_4:42543257-42543276 | Msa1154820:intron | 25.0% |
| ! | AAAGGATCATATGATATGTT+GGG | + | chr7_4:42543399-42543418 | None:intergenic | 25.0% |
| ! | AAAAGGATCATATGATATGT+TGG | + | chr7_4:42543400-42543419 | None:intergenic | 25.0% |
| ! | AGTAAATTGAATTGGACAAA+AGG | + | chr7_4:42543417-42543436 | None:intergenic | 25.0% |
| ! | AGTTCTACATAATTGAAGTT+TGG | + | chr7_4:42543489-42543508 | None:intergenic | 25.0% |
| !!! | TTCTAATTGTTGTGTTGTTT+TGG | - | chr7_4:42543619-42543638 | Msa1154820:intron | 25.0% |
| !! | TGATCTAAAATTGATGATAC+AGG | + | chr7_4:42543832-42543851 | None:intergenic | 25.0% |
| !!! | CCATCATTATTTCTAAGAAT+AGG | + | chr7_4:42544233-42544252 | None:intergenic | 25.0% |
| ! | CCTATTCTTAGAAATAATGA+TGG | - | chr7_4:42544230-42544249 | Msa1154820:intron | 25.0% |
| !!! | AATAATGATGGGTTATTAAG+CGG | - | chr7_4:42544242-42544261 | Msa1154820:intron | 25.0% |
| !! | TTAAAGTTTTTAATAGGGAG+TGG | + | chr7_4:42544269-42544288 | None:intergenic | 25.0% |
| ! | GAAATAGCTCCATTTATATA+AGG | - | chr7_4:42544347-42544366 | Msa1154820:intron | 25.0% |
| TTGTAAGCTTGGAAACATAT+TGG | - | chr7_4:42539877-42539896 | Msa1154820:three_prime_UTR | 30.0% | |
| TTGTATGGTACTTACAGTTT+AGG | + | chr7_4:42540031-42540050 | None:intergenic | 30.0% | |
| GTCAAAAAACTCTTCATGAA+TGG | + | chr7_4:42540213-42540232 | None:intergenic | 30.0% | |
| AGTACTTCCATTAAATTGTC+GGG | + | chr7_4:42540236-42540255 | None:intergenic | 30.0% | |
| !! | TTAATGGAAGTACTTTCATG+AGG | - | chr7_4:42540242-42540261 | Msa1154820:three_prime_UTR | 30.0% |
| ! | TGTTTTGTGAAACTTTTAGC+AGG | - | chr7_4:42540344-42540363 | Msa1154820:three_prime_UTR | 30.0% |
| ATAATGAGACAAAGTTCAAG+AGG | - | chr7_4:42540390-42540409 | Msa1154820:intron | 30.0% | |
| TAATGAGACAAAGTTCAAGA+GGG | - | chr7_4:42540391-42540410 | Msa1154820:intron | 30.0% | |
| !!! | TTTTTTTGATGTGGGAGAAA+TGG | - | chr7_4:42540577-42540596 | Msa1154820:intron | 30.0% |
| ! | AAATGGTTACTTTGAACACA+AGG | + | chr7_4:42540664-42540683 | None:intergenic | 30.0% |
| ! | TAATTTCTGGAGACATCTTA+TGG | - | chr7_4:42541033-42541052 | Msa1154820:intron | 30.0% |
| TTACAGTGATACTGTGTATT+TGG | + | chr7_4:42541192-42541211 | None:intergenic | 30.0% | |
| TAGTGCAAAACAGAGTTATA+TGG | + | chr7_4:42541470-42541489 | None:intergenic | 30.0% | |
| AACTCTCAATGTAGAAAAGA+TGG | - | chr7_4:42541574-42541593 | Msa1154820:three_prime_UTR | 30.0% | |
| !! | TCTTAGGTGATTTGGTTATT+CGG | - | chr7_4:42541607-42541626 | Msa1154820:three_prime_UTR | 30.0% |
| ATCATATGCCTTCATAATAC+GGG | - | chr7_4:42541744-42541763 | Msa1154820:three_prime_UTR | 30.0% | |
| TTCCATCTGCATAAATGAAT+AGG | - | chr7_4:42541768-42541787 | Msa1154820:three_prime_UTR | 30.0% | |
| ATCCTATTCATTTATGCAGA+TGG | + | chr7_4:42541773-42541792 | None:intergenic | 30.0% | |
| ! | GTGGAAGTTTTCTTCTTTAT+TGG | - | chr7_4:42542167-42542186 | Msa1154820:three_prime_UTR | 30.0% |
| AATGATCAAGAAGAGATGAA+AGG | - | chr7_4:42542227-42542246 | Msa1154820:three_prime_UTR | 30.0% | |
| ! | AGGATTCATAATCTTTGGAA+TGG | - | chr7_4:42542247-42542266 | Msa1154820:three_prime_UTR | 30.0% |
| ! | GCTTTTATACTGCACTATAA+AGG | + | chr7_4:42542666-42542685 | None:intergenic | 30.0% |
| AGTGCAGTATAAAAGCTTAT+TGG | - | chr7_4:42542670-42542689 | Msa1154820:three_prime_UTR | 30.0% | |
| TTTCAGTTTGAATCTTGTGT+AGG | - | chr7_4:42542942-42542961 | Msa1154820:intron | 30.0% | |
| TTCAGTTTGAATCTTGTGTA+GGG | - | chr7_4:42542943-42542962 | Msa1154820:intron | 30.0% | |
| CTAATGATTAAGTAATCAGC+AGG | + | chr7_4:42543003-42543022 | None:intergenic | 30.0% | |
| AAGTTGCCCAAATTGTTTAT+TGG | - | chr7_4:42543034-42543053 | Msa1154820:intron | 30.0% | |
| GAAACACAATGCAAAACATT+TGG | - | chr7_4:42543093-42543112 | Msa1154820:intron | 30.0% | |
| TACAATGATATAGGAGATTG+TGG | - | chr7_4:42543219-42543238 | Msa1154820:intron | 30.0% | |
| GATTGTGGTAAAGATAACAA+AGG | - | chr7_4:42543234-42543253 | Msa1154820:intron | 30.0% | |
| !! | AAGAAAGCACCTGTTATTTA+TGG | - | chr7_4:42543292-42543311 | Msa1154820:intron | 30.0% |
| !! | AGAAAGCACCTGTTATTTAT+GGG | - | chr7_4:42543293-42543312 | Msa1154820:intron | 30.0% |
| TCCAATTCAATTTACTGCTA+TGG | - | chr7_4:42543421-42543440 | Msa1154820:intron | 30.0% | |
| ACCATAGCAGTAAATTGAAT+TGG | + | chr7_4:42543425-42543444 | None:intergenic | 30.0% | |
| GTTAAACTACATTTACACCT+TGG | - | chr7_4:42543513-42543532 | Msa1154820:intron | 30.0% | |
| ! | AACCAACAACTTTTCTCATT+GGG | + | chr7_4:42543791-42543810 | None:intergenic | 30.0% |
| ! | AAACCAACAACTTTTCTCAT+TGG | + | chr7_4:42543792-42543811 | None:intergenic | 30.0% |
| ! | TCTAAAATTGATGATACAGG+TGG | + | chr7_4:42543829-42543848 | None:intergenic | 30.0% |
| ! | AAAATTTCTCGGGCTTTATA+TGG | - | chr7_4:42543964-42543983 | Msa1154820:intron | 30.0% |
| !!! | ATTTTTGTTTTTTACGGGGA+AGG | - | chr7_4:42544019-42544038 | Msa1154820:intron | 30.0% |
| ! | TAATCTGGCTTAACATAGAA+AGG | - | chr7_4:42544043-42544062 | Msa1154820:intron | 30.0% |
| !! | ATAATGATGGGTTATTAAGC+GGG | - | chr7_4:42544243-42544262 | Msa1154820:intron | 30.0% |
| ! | GCTTTTATACTGCACTATAA+AGG | + | chr7_4:42542666-42542685 | None:intergenic | 30.0% |
| AGTGCAGTATAAAAGCTTAT+TGG | - | chr7_4:42542670-42542689 | Msa1154820:three_prime_UTR | 30.0% | |
| TTTCAGTTTGAATCTTGTGT+AGG | - | chr7_4:42542942-42542961 | Msa1154820:intron | 30.0% | |
| TTCAGTTTGAATCTTGTGTA+GGG | - | chr7_4:42542943-42542962 | Msa1154820:intron | 30.0% | |
| CTAATGATTAAGTAATCAGC+AGG | + | chr7_4:42543003-42543022 | None:intergenic | 30.0% | |
| AAGTTGCCCAAATTGTTTAT+TGG | - | chr7_4:42543034-42543053 | Msa1154820:intron | 30.0% | |
| GAAACACAATGCAAAACATT+TGG | - | chr7_4:42543093-42543112 | Msa1154820:intron | 30.0% | |
| TACAATGATATAGGAGATTG+TGG | - | chr7_4:42543219-42543238 | Msa1154820:intron | 30.0% | |
| GATTGTGGTAAAGATAACAA+AGG | - | chr7_4:42543234-42543253 | Msa1154820:intron | 30.0% | |
| !! | AAGAAAGCACCTGTTATTTA+TGG | - | chr7_4:42543292-42543311 | Msa1154820:intron | 30.0% |
| !! | AGAAAGCACCTGTTATTTAT+GGG | - | chr7_4:42543293-42543312 | Msa1154820:intron | 30.0% |
| TCCAATTCAATTTACTGCTA+TGG | - | chr7_4:42543421-42543440 | Msa1154820:intron | 30.0% | |
| ACCATAGCAGTAAATTGAAT+TGG | + | chr7_4:42543425-42543444 | None:intergenic | 30.0% | |
| GTTAAACTACATTTACACCT+TGG | - | chr7_4:42543513-42543532 | Msa1154820:intron | 30.0% | |
| ! | AACCAACAACTTTTCTCATT+GGG | + | chr7_4:42543791-42543810 | None:intergenic | 30.0% |
| ! | AAACCAACAACTTTTCTCAT+TGG | + | chr7_4:42543792-42543811 | None:intergenic | 30.0% |
| ! | TCTAAAATTGATGATACAGG+TGG | + | chr7_4:42543829-42543848 | None:intergenic | 30.0% |
| ! | AAAATTTCTCGGGCTTTATA+TGG | - | chr7_4:42543964-42543983 | Msa1154820:intron | 30.0% |
| !!! | ATTTTTGTTTTTTACGGGGA+AGG | - | chr7_4:42544019-42544038 | Msa1154820:intron | 30.0% |
| ! | TAATCTGGCTTAACATAGAA+AGG | - | chr7_4:42544043-42544062 | Msa1154820:intron | 30.0% |
| !! | ATAATGATGGGTTATTAAGC+GGG | - | chr7_4:42544243-42544262 | Msa1154820:intron | 30.0% |
| !! | TGAACCTCTAGGATATATCT+GGG | - | chr7_4:42539837-42539856 | Msa1154820:three_prime_UTR | 35.0% |
| GAATGACACAATGGACAAAA+TGG | + | chr7_4:42539951-42539970 | None:intergenic | 35.0% | |
| ACACATCATGAATGACACAA+TGG | + | chr7_4:42539960-42539979 | None:intergenic | 35.0% | |
| TCTACCAAAACAATCTGATC+TGG | + | chr7_4:42540182-42540201 | None:intergenic | 35.0% | |
| ! | TTTTGACCCCGACAATTTAA+TGG | - | chr7_4:42540226-42540245 | Msa1154820:three_prime_UTR | 35.0% |
| GTACTTCCATTAAATTGTCG+GGG | + | chr7_4:42540235-42540254 | None:intergenic | 35.0% | |
| CACCCAACTGAAATTTACAA+AGG | + | chr7_4:42540637-42540656 | None:intergenic | 35.0% | |
| ! | TGAGAAACTGTCAAAGTGTT+TGG | - | chr7_4:42541152-42541171 | Msa1154820:intron | 35.0% |
| ! | ACTGTCAAAGTGTTTGGTTA+TGG | - | chr7_4:42541158-42541177 | Msa1154820:intron | 35.0% |
| ! | CTGTCAAAGTGTTTGGTTAT+GGG | - | chr7_4:42541159-42541178 | Msa1154820:intron | 35.0% |
| AATGAGAGAGAACTCAAAAG+AGG | + | chr7_4:42541280-42541299 | None:intergenic | 35.0% | |
| !! | AGATGGTAGAGTATTGTCTT+AGG | - | chr7_4:42541591-42541610 | Msa1154820:three_prime_UTR | 35.0% |
| ! | GAGTATTGTCTTAGGTGATT+TGG | - | chr7_4:42541599-42541618 | Msa1154820:three_prime_UTR | 35.0% |
| !! | CTTAGGTGATTTGGTTATTC+GGG | - | chr7_4:42541608-42541627 | Msa1154820:three_prime_UTR | 35.0% |
| !! | TTAGGTGATTTGGTTATTCG+GGG | - | chr7_4:42541609-42541628 | Msa1154820:three_prime_UTR | 35.0% |
| AGATACTGTTAACTCTCTCT+TGG | + | chr7_4:42541676-42541695 | None:intergenic | 35.0% | |
| AGAAAGAGCAAGTCATTTCA+TGG | - | chr7_4:42541937-42541956 | Msa1154820:three_prime_UTR | 35.0% | |
| TTGACCACAAATGTCATAGT+TGG | - | chr7_4:42542280-42542299 | Msa1154820:three_prime_UTR | 35.0% | |
| TGACCACAAATGTCATAGTT+GGG | - | chr7_4:42542281-42542300 | Msa1154820:three_prime_UTR | 35.0% | |
| ATACCCAACTATGACATTTG+TGG | + | chr7_4:42542287-42542306 | None:intergenic | 35.0% | |
| ATCAAAATCCAAGTTAGGCA+AGG | + | chr7_4:42542386-42542405 | None:intergenic | 35.0% | |
| GCATAGAGATAAAAGACATC+AGG | + | chr7_4:42542588-42542607 | None:intergenic | 35.0% | |
| CTATAAAGGACTTTGTAGGA+AGG | + | chr7_4:42542652-42542671 | None:intergenic | 35.0% | |
| TGCACTATAAAGGACTTTGT+AGG | + | chr7_4:42542656-42542675 | None:intergenic | 35.0% | |
| TAAACTGCATAACTGACATG+AGG | - | chr7_4:42542765-42542784 | Msa1154820:CDS | 35.0% | |
| ! | AAATGTGAGTATTGTGCGTT+GGG | + | chr7_4:42543143-42543162 | None:intergenic | 35.0% |
| !! | TAAGAAGGCACTTCTAAAGA+GGG | + | chr7_4:42543179-42543198 | None:intergenic | 35.0% |
| TCAGCATTGTATCAGTAAGA+AGG | + | chr7_4:42543194-42543213 | None:intergenic | 35.0% | |
| AAGGAGAGAATATGGCATAA+AGG | - | chr7_4:42543265-42543284 | Msa1154820:intron | 35.0% | |
| GCTTTCTTCCCATAAATAAC+AGG | + | chr7_4:42543304-42543323 | None:intergenic | 35.0% | |
| AGAGCTACTCATCAAATTTC+AGG | + | chr7_4:42543328-42543347 | None:intergenic | 35.0% | |
| AAACTGCTAGCAAACTATGA+AGG | - | chr7_4:42543865-42543884 | Msa1154820:intron | 35.0% | |
| AACTGCTAGCAAACTATGAA+GGG | - | chr7_4:42543866-42543885 | Msa1154820:intron | 35.0% | |
| GCTTTATATGGAGAAGGTAA+GGG | - | chr7_4:42543976-42543995 | Msa1154820:intron | 35.0% | |
| ! | ACATAGAAAGGCTTTATACG+AGG | - | chr7_4:42544055-42544074 | Msa1154820:intron | 35.0% |
| ! | CATAGAAAGGCTTTATACGA+GGG | - | chr7_4:42544056-42544075 | Msa1154820:intron | 35.0% |
| GCATAGAGATAAAAGACATC+AGG | + | chr7_4:42542588-42542607 | None:intergenic | 35.0% | |
| CTATAAAGGACTTTGTAGGA+AGG | + | chr7_4:42542652-42542671 | None:intergenic | 35.0% | |
| TGCACTATAAAGGACTTTGT+AGG | + | chr7_4:42542656-42542675 | None:intergenic | 35.0% | |
| TAAACTGCATAACTGACATG+AGG | - | chr7_4:42542765-42542784 | Msa1154820:CDS | 35.0% | |
| ! | AAATGTGAGTATTGTGCGTT+GGG | + | chr7_4:42543143-42543162 | None:intergenic | 35.0% |
| !! | TAAGAAGGCACTTCTAAAGA+GGG | + | chr7_4:42543179-42543198 | None:intergenic | 35.0% |
| TCAGCATTGTATCAGTAAGA+AGG | + | chr7_4:42543194-42543213 | None:intergenic | 35.0% | |
| AAGGAGAGAATATGGCATAA+AGG | - | chr7_4:42543265-42543284 | Msa1154820:intron | 35.0% | |
| GCTTTCTTCCCATAAATAAC+AGG | + | chr7_4:42543304-42543323 | None:intergenic | 35.0% | |
| AGAGCTACTCATCAAATTTC+AGG | + | chr7_4:42543328-42543347 | None:intergenic | 35.0% | |
| CAAAGAGGCAAGAAATTACA+TGG | - | chr7_4:42543684-42543703 | Msa1154820:intron | 35.0% | |
| AAACTGCTAGCAAACTATGA+AGG | - | chr7_4:42543865-42543884 | Msa1154820:intron | 35.0% | |
| AACTGCTAGCAAACTATGAA+GGG | - | chr7_4:42543866-42543885 | Msa1154820:intron | 35.0% | |
| GCTTTATATGGAGAAGGTAA+GGG | - | chr7_4:42543976-42543995 | Msa1154820:intron | 35.0% | |
| ! | ACATAGAAAGGCTTTATACG+AGG | - | chr7_4:42544055-42544074 | Msa1154820:intron | 35.0% |
| ! | CATAGAAAGGCTTTATACGA+GGG | - | chr7_4:42544056-42544075 | Msa1154820:intron | 35.0% |
| !! | TAATTGGCTTGTGAACCTCT+AGG | - | chr7_4:42539826-42539845 | Msa1154820:three_prime_UTR | 40.0% |
| !! | GTGAACCTCTAGGATATATC+TGG | - | chr7_4:42539836-42539855 | Msa1154820:three_prime_UTR | 40.0% |
| TCATTCATGATGTGTGTGTG+TGG | - | chr7_4:42539965-42539984 | Msa1154820:three_prime_UTR | 40.0% | |
| AAACAATCTGATCTGGCATG+TGG | + | chr7_4:42540175-42540194 | None:intergenic | 40.0% | |
| ! | CATGCCAGATCAGATTGTTT+TGG | - | chr7_4:42540175-42540194 | Msa1154820:three_prime_UTR | 40.0% |
| ! | TATCTTGATAGCTACTCGCA+AGG | + | chr7_4:42540439-42540458 | None:intergenic | 40.0% |
| CAAGATACTGCCATTGAACT+TGG | - | chr7_4:42540452-42540471 | Msa1154820:intron | 40.0% | |
| ! | ACTGTACTTTGTTTCGCTCT+TGG | - | chr7_4:42540896-42540915 | Msa1154820:intron | 40.0% |
| ! | AAAGTGTTTAGATAGCAGCC+AGG | + | chr7_4:42541133-42541152 | None:intergenic | 40.0% |
| !! | TAGGTGATTTGGTTATTCGG+GGG | - | chr7_4:42541610-42541629 | Msa1154820:three_prime_UTR | 40.0% |
| TAATCTTTCATGGTACCTGC+AGG | - | chr7_4:42541974-42541993 | Msa1154820:three_prime_UTR | 40.0% | |
| TGTTCAAACCTTGCCTAACT+TGG | - | chr7_4:42542375-42542394 | Msa1154820:intron | 40.0% | |
| !!! | GCTCTAAGATTTTGCAAGCT+TGG | - | chr7_4:42542472-42542491 | Msa1154820:intron | 40.0% |
| CAGGCATCCAAATAAACCAA+AGG | + | chr7_4:42542569-42542588 | None:intergenic | 40.0% | |
| TAGTTGAGGGAGAACTTGAA+AGG | - | chr7_4:42542711-42542730 | Msa1154820:CDS | 40.0% | |
| GGGAGAACTTGAAAGGAAAA+TGG | - | chr7_4:42542718-42542737 | Msa1154820:CDS | 40.0% | |
| TATGCAGTTTAGCACTCTCA+TGG | + | chr7_4:42542756-42542775 | None:intergenic | 40.0% | |
| TTGAATCTTGTGTAGGGACT+TGG | - | chr7_4:42542949-42542968 | Msa1154820:intron | 40.0% | |
| TGAATCTTGTGTAGGGACTT+GGG | - | chr7_4:42542950-42542969 | Msa1154820:intron | 40.0% | |
| AGTAATCAGCAGGATTGAGT+GGG | + | chr7_4:42542993-42543012 | None:intergenic | 40.0% | |
| AAGTAATCAGCAGGATTGAG+TGG | + | chr7_4:42542994-42543013 | None:intergenic | 40.0% | |
| ! | AATGTGAGTATTGTGCGTTG+GGG | + | chr7_4:42543142-42543161 | None:intergenic | 40.0% |
| ! | GAAATGTGAGTATTGTGCGT+TGG | + | chr7_4:42543144-42543163 | None:intergenic | 40.0% |
| !! | GTAAGAAGGCACTTCTAAAG+AGG | + | chr7_4:42543180-42543199 | None:intergenic | 40.0% |
| GATTACCTTGATCATGCAAG+TGG | + | chr7_4:42543367-42543386 | None:intergenic | 40.0% | |
| ! | GAAGTTTGGAAGCATGTTTG+TGG | + | chr7_4:42543475-42543494 | None:intergenic | 40.0% |
| !! | GTAACTTCAACTTGCTGCTA+TGG | - | chr7_4:42543643-42543662 | Msa1154820:intron | 40.0% |
| GTCCCAATGAGAAAAGTTGT+TGG | - | chr7_4:42543786-42543805 | Msa1154820:intron | 40.0% | |
| TGATAAGGGTTCAAGTAGGA+TGG | - | chr7_4:42543905-42543924 | Msa1154820:intron | 40.0% | |
| ! | GGCTTTATATGGAGAAGGTA+AGG | - | chr7_4:42543975-42543994 | Msa1154820:intron | 40.0% |
| ! | TTTTACGGGGAAGGTTAATC+TGG | - | chr7_4:42544028-42544047 | Msa1154820:intron | 40.0% |
| ! | TGATTTGGCCATTTAAGACC+AGG | + | chr7_4:42544180-42544199 | None:intergenic | 40.0% |
| !!! | GCTCTAAGATTTTGCAAGCT+TGG | - | chr7_4:42542472-42542491 | Msa1154820:intron | 40.0% |
| CAGGCATCCAAATAAACCAA+AGG | + | chr7_4:42542569-42542588 | None:intergenic | 40.0% | |
| TAGTTGAGGGAGAACTTGAA+AGG | - | chr7_4:42542711-42542730 | Msa1154820:CDS | 40.0% | |
| GGGAGAACTTGAAAGGAAAA+TGG | - | chr7_4:42542718-42542737 | Msa1154820:CDS | 40.0% | |
| TATGCAGTTTAGCACTCTCA+TGG | + | chr7_4:42542756-42542775 | None:intergenic | 40.0% | |
| TTGAATCTTGTGTAGGGACT+TGG | - | chr7_4:42542949-42542968 | Msa1154820:intron | 40.0% | |
| TGAATCTTGTGTAGGGACTT+GGG | - | chr7_4:42542950-42542969 | Msa1154820:intron | 40.0% | |
| AGTAATCAGCAGGATTGAGT+GGG | + | chr7_4:42542993-42543012 | None:intergenic | 40.0% | |
| AAGTAATCAGCAGGATTGAG+TGG | + | chr7_4:42542994-42543013 | None:intergenic | 40.0% | |
| ! | AATGTGAGTATTGTGCGTTG+GGG | + | chr7_4:42543142-42543161 | None:intergenic | 40.0% |
| ! | GAAATGTGAGTATTGTGCGT+TGG | + | chr7_4:42543144-42543163 | None:intergenic | 40.0% |
| !! | GTAAGAAGGCACTTCTAAAG+AGG | + | chr7_4:42543180-42543199 | None:intergenic | 40.0% |
| GATTACCTTGATCATGCAAG+TGG | + | chr7_4:42543367-42543386 | None:intergenic | 40.0% | |
| ! | GAAGTTTGGAAGCATGTTTG+TGG | + | chr7_4:42543475-42543494 | None:intergenic | 40.0% |
| !! | GTAACTTCAACTTGCTGCTA+TGG | - | chr7_4:42543643-42543662 | Msa1154820:intron | 40.0% |
| GTCCCAATGAGAAAAGTTGT+TGG | - | chr7_4:42543786-42543805 | Msa1154820:intron | 40.0% | |
| TGATAAGGGTTCAAGTAGGA+TGG | - | chr7_4:42543905-42543924 | Msa1154820:intron | 40.0% | |
| ! | GGCTTTATATGGAGAAGGTA+AGG | - | chr7_4:42543975-42543994 | Msa1154820:intron | 40.0% |
| ! | TTTTACGGGGAAGGTTAATC+TGG | - | chr7_4:42544028-42544047 | Msa1154820:intron | 40.0% |
| ! | TGATTTGGCCATTTAAGACC+AGG | + | chr7_4:42544180-42544199 | None:intergenic | 40.0% |
| CTCACCCAGATATATCCTAG+AGG | + | chr7_4:42539844-42539863 | None:intergenic | 45.0% | |
| CTAGGATATATCTGGGTGAG+TGG | - | chr7_4:42539844-42539863 | Msa1154820:three_prime_UTR | 45.0% | |
| GTTTCCAAGCTTACAAACCC+TGG | + | chr7_4:42539873-42539892 | None:intergenic | 45.0% | |
| ATCTTCCTAGCAAAGCGAGA+TGG | + | chr7_4:42539926-42539945 | None:intergenic | 45.0% | |
| TGGCATGTGGTAATCAGATC+TGG | + | chr7_4:42540162-42540181 | None:intergenic | 45.0% | |
| TGAGACAAAGTTCAAGAGGG+TGG | - | chr7_4:42540394-42540413 | Msa1154820:intron | 45.0% | |
| GAGACAAAGTTCAAGAGGGT+GGG | - | chr7_4:42540395-42540414 | Msa1154820:intron | 45.0% | |
| GATGGAAGCCCGTATTATGA+AGG | + | chr7_4:42541755-42541774 | None:intergenic | 45.0% | |
| CAATTGCTTGATTGTCCTGC+AGG | + | chr7_4:42541992-42542011 | None:intergenic | 45.0% | |
| CATGCACTGCTTGTAGTTGA+GGG | - | chr7_4:42542698-42542717 | Msa1154820:exon | 45.0% | |
| GCAAGTGGTGAACTCTAAAC+AGG | + | chr7_4:42543352-42543371 | None:intergenic | 45.0% | |
| GTTCACCACTTGCATGATCA+AGG | - | chr7_4:42543359-42543378 | Msa1154820:intron | 45.0% | |
| CTTGCTGCTATGGAATCCTA+CGG | - | chr7_4:42543653-42543672 | Msa1154820:intron | 45.0% | |
| TGCTATGGAATCCTACGGAT+TGG | - | chr7_4:42543658-42543677 | Msa1154820:intron | 45.0% | |
| AAACTATGAAGGGCTTCAGC+TGG | - | chr7_4:42543876-42543895 | Msa1154820:intron | 45.0% | |
| TTCAGCTGGATGGCATGATA+AGG | - | chr7_4:42543890-42543909 | Msa1154820:intron | 45.0% | |
| TCAGCTGGATGGCATGATAA+GGG | - | chr7_4:42543891-42543910 | Msa1154820:intron | 45.0% | |
| GGCATGATAAGGGTTCAAGT+AGG | - | chr7_4:42543901-42543920 | Msa1154820:intron | 45.0% | |
| ! | TCTCGGGCTTTATATGGAGA+AGG | - | chr7_4:42543970-42543989 | Msa1154820:intron | 45.0% |
| !! | GCAGATCACCTGGTCTTAAA+TGG | - | chr7_4:42544169-42544188 | Msa1154820:intron | 45.0% |
| ! | TTCGCTGATGTGGCATTTTG+TGG | + | chr7_4:42544316-42544335 | None:intergenic | 45.0% |
| AAGCAACTGTTTCGCTGATG+TGG | + | chr7_4:42544326-42544345 | None:intergenic | 45.0% | |
| CATGCACTGCTTGTAGTTGA+GGG | - | chr7_4:42542698-42542717 | Msa1154820:exon | 45.0% | |
| GCAAGTGGTGAACTCTAAAC+AGG | + | chr7_4:42543352-42543371 | None:intergenic | 45.0% | |
| GTTCACCACTTGCATGATCA+AGG | - | chr7_4:42543359-42543378 | Msa1154820:intron | 45.0% | |
| CTTGCTGCTATGGAATCCTA+CGG | - | chr7_4:42543653-42543672 | Msa1154820:intron | 45.0% | |
| TGCTATGGAATCCTACGGAT+TGG | - | chr7_4:42543658-42543677 | Msa1154820:intron | 45.0% | |
| AAACTATGAAGGGCTTCAGC+TGG | - | chr7_4:42543876-42543895 | Msa1154820:intron | 45.0% | |
| TTCAGCTGGATGGCATGATA+AGG | - | chr7_4:42543890-42543909 | Msa1154820:intron | 45.0% | |
| TCAGCTGGATGGCATGATAA+GGG | - | chr7_4:42543891-42543910 | Msa1154820:intron | 45.0% | |
| GGCATGATAAGGGTTCAAGT+AGG | - | chr7_4:42543901-42543920 | Msa1154820:intron | 45.0% | |
| ! | TCTCGGGCTTTATATGGAGA+AGG | - | chr7_4:42543970-42543989 | Msa1154820:intron | 45.0% |
| !! | GCAGATCACCTGGTCTTAAA+TGG | - | chr7_4:42544169-42544188 | Msa1154820:intron | 45.0% |
| ! | TTCGCTGATGTGGCATTTTG+TGG | + | chr7_4:42544316-42544335 | None:intergenic | 45.0% |
| AAGCAACTGTTTCGCTGATG+TGG | + | chr7_4:42544326-42544345 | None:intergenic | 45.0% | |
| !! | AATAAATAATTAAAATTTCT+CGG | - | chr7_4:42543953-42543972 | Msa1154820:intron | 5.0% |
| !! | AAGAATTAAAAATATTAATT+AGG | - | chr7_4:42544199-42544218 | Msa1154820:intron | 5.0% |
| !! | AATAAATAATTAAAATTTCT+CGG | - | chr7_4:42543953-42543972 | Msa1154820:intron | 5.0% |
| !! | AAGAATTAAAAATATTAATT+AGG | - | chr7_4:42544199-42544218 | Msa1154820:intron | 5.0% |
| GCTTCCAGGGTTTGTAAGCT+TGG | - | chr7_4:42539866-42539885 | Msa1154820:three_prime_UTR | 50.0% | |
| TCATGCCATCTCGCTTTGCT+AGG | - | chr7_4:42539918-42539937 | Msa1154820:three_prime_UTR | 50.0% | |
| TCATGATGTGTGTGTGTGGC+AGG | - | chr7_4:42539969-42539988 | Msa1154820:three_prime_UTR | 50.0% | |
| !! | CAAGAGGGTGGGTGTTTTTG+TGG | - | chr7_4:42540406-42540425 | Msa1154820:intron | 50.0% |
| TGCTTGCTTACATGCTTGCC+TGG | - | chr7_4:42541112-42541131 | Msa1154820:intron | 50.0% | |
| !! | GTGATTTGGTTATTCGGGGG+AGG | - | chr7_4:42541613-42541632 | Msa1154820:three_prime_UTR | 50.0% |
| ATTCGGGGGAGGAAACTTGT+AGG | - | chr7_4:42541624-42541643 | Msa1154820:three_prime_UTR | 50.0% | |
| CCTCAACTACAAGCAGTGCA+TGG | + | chr7_4:42542700-42542719 | None:intergenic | 50.0% | |
| CCATGCACTGCTTGTAGTTG+AGG | - | chr7_4:42542697-42542716 | Msa1154820:exon | 50.0% | |
| CCTCTTTGTCTCCAATCCGT+AGG | + | chr7_4:42543672-42543691 | None:intergenic | 50.0% | |
| TATGAAGGGCTTCAGCTGGA+TGG | - | chr7_4:42543880-42543899 | Msa1154820:intron | 50.0% | |
| ! | CTGTGTGGATTGTCAGAAGG+CGG | + | chr7_4:42544124-42544143 | None:intergenic | 50.0% |
| ! | AGCCTGTGTGGATTGTCAGA+AGG | + | chr7_4:42544127-42544146 | None:intergenic | 50.0% |
| AAGTGGATGATCAGCCTGTG+TGG | + | chr7_4:42544139-42544158 | None:intergenic | 50.0% | |
| ACACAGGCTGATCATCCACT+TGG | - | chr7_4:42544138-42544157 | Msa1154820:intron | 50.0% | |
| GATCTGCACTTCTCACCAAG+TGG | + | chr7_4:42544156-42544175 | None:intergenic | 50.0% | |
| CCTCAACTACAAGCAGTGCA+TGG | + | chr7_4:42542700-42542719 | None:intergenic | 50.0% | |
| CCATGCACTGCTTGTAGTTG+AGG | - | chr7_4:42542697-42542716 | Msa1154820:exon | 50.0% | |
| CCTCTTTGTCTCCAATCCGT+AGG | + | chr7_4:42543672-42543691 | None:intergenic | 50.0% | |
| !! | CCTACGGATTGGAGACAAAG+AGG | - | chr7_4:42543669-42543688 | Msa1154820:intron | 50.0% |
| TATGAAGGGCTTCAGCTGGA+TGG | - | chr7_4:42543880-42543899 | Msa1154820:intron | 50.0% | |
| ! | CTGTGTGGATTGTCAGAAGG+CGG | + | chr7_4:42544124-42544143 | None:intergenic | 50.0% |
| ! | AGCCTGTGTGGATTGTCAGA+AGG | + | chr7_4:42544127-42544146 | None:intergenic | 50.0% |
| AAGTGGATGATCAGCCTGTG+TGG | + | chr7_4:42544139-42544158 | None:intergenic | 50.0% | |
| ACACAGGCTGATCATCCACT+TGG | - | chr7_4:42544138-42544157 | Msa1154820:intron | 50.0% | |
| GATCTGCACTTCTCACCAAG+TGG | + | chr7_4:42544156-42544175 | None:intergenic | 50.0% | |
| TATCTGGGTGAGTGGCTTCC+AGG | - | chr7_4:42539852-42539871 | Msa1154820:three_prime_UTR | 55.0% | |
| ATCTGGGTGAGTGGCTTCCA+GGG | - | chr7_4:42539853-42539872 | Msa1154820:three_prime_UTR | 55.0% | |
| TGATGTGTGTGTGTGGCAGG+AGG | - | chr7_4:42539972-42539991 | Msa1154820:three_prime_UTR | 55.0% | |
| GTGTGTGTGGCAGGAGGATA+TGG | - | chr7_4:42539978-42539997 | Msa1154820:three_prime_UTR | 55.0% | |
| GATTGTCAGAAGGCGGCAGA+GGG | + | chr7_4:42544117-42544136 | None:intergenic | 55.0% | |
| CGCCTTCTGACAATCCACAC+AGG | - | chr7_4:42544122-42544141 | Msa1154820:intron | 55.0% | |
| ! | GGTGAGAAGTGCAGATCACC+TGG | - | chr7_4:42544159-42544178 | Msa1154820:intron | 55.0% |
| GATTGTCAGAAGGCGGCAGA+GGG | + | chr7_4:42544117-42544136 | None:intergenic | 55.0% | |
| CGCCTTCTGACAATCCACAC+AGG | - | chr7_4:42544122-42544141 | Msa1154820:intron | 55.0% | |
| ! | GGTGAGAAGTGCAGATCACC+TGG | - | chr7_4:42544159-42544178 | Msa1154820:intron | 55.0% |
| GGATTGTCAGAAGGCGGCAG+AGG | + | chr7_4:42544118-42544137 | None:intergenic | 60.0% | |
| GGATTGTCAGAAGGCGGCAG+AGG | + | chr7_4:42544118-42544137 | None:intergenic | 60.0% | |
| AGAAGGCGGCAGAGGGCAGA+AGG | + | chr7_4:42544110-42544129 | None:intergenic | 65.0% | |
| AGAAGGCGGCAGAGGGCAGA+AGG | + | chr7_4:42544110-42544129 | None:intergenic | 65.0% | |
| GCGGCAGAGGGCAGAAGGTG+TGG | + | chr7_4:42544105-42544124 | None:intergenic | 70.0% | |
| GCGGCAGAGGGCAGAAGGTG+TGG | + | chr7_4:42544105-42544124 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 42539692 | 42546343 | 42539692 | ID=Msa1154820;Name=Msa1154820 |
| chr7_4 | mRNA | 42539692 | 42546343 | 42539692 | ID=Msa1154820-mRNA-1;Parent=Msa1154820;Name=Msa1154820-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.66|0.85|0.85|0.33|0.28|7|1923|76 |
| chr7_4 | exon | 42539692 | 42540389 | 42539692 | ID=Msa1154820-mRNA-1:exon:10489;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42540692 | 42540840 | 42540692 | ID=Msa1154820-mRNA-1:exon:10488;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42541286 | 42541372 | 42541286 | ID=Msa1154820-mRNA-1:exon:10487;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42541402 | 42542346 | 42541402 | ID=Msa1154820-mRNA-1:exon:10486;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42542655 | 42542803 | 42542655 | ID=Msa1154820-mRNA-1:exon:10485;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42545551 | 42545669 | 42545551 | ID=Msa1154820-mRNA-1:exon:10484;Parent=Msa1154820-mRNA-1 |
| chr7_4 | exon | 42546337 | 42546343 | 42546337 | ID=Msa1154820-mRNA-1:exon:10483;Parent=Msa1154820-mRNA-1 |
| chr7_4 | CDS | 42546337 | 42546343 | 42546337 | ID=Msa1154820-mRNA-1:cds;Parent=Msa1154820-mRNA-1 |
| chr7_4 | CDS | 42545551 | 42545669 | 42545551 | ID=Msa1154820-mRNA-1:cds;Parent=Msa1154820-mRNA-1 |
| chr7_4 | CDS | 42542699 | 42542803 | 42542699 | ID=Msa1154820-mRNA-1:cds;Parent=Msa1154820-mRNA-1 |
| chr7_4 | three_prime_UTR | 42542655 | 42542698 | 42542655 | ID=Msa1154820-mRNA-1:three_prime_utr;Parent=Msa1154820-mRNA-1 |
| chr7_4 | three_prime_UTR | 42541402 | 42542346 | 42541402 | ID=Msa1154820-mRNA-1:three_prime_utr;Parent=Msa1154820-mRNA-1 |
| chr7_4 | three_prime_UTR | 42541286 | 42541372 | 42541286 | ID=Msa1154820-mRNA-1:three_prime_utr;Parent=Msa1154820-mRNA-1 |
| chr7_4 | three_prime_UTR | 42540692 | 42540840 | 42540692 | ID=Msa1154820-mRNA-1:three_prime_utr;Parent=Msa1154820-mRNA-1 |
| chr7_4 | three_prime_UTR | 42539692 | 42540389 | 42539692 | ID=Msa1154820-mRNA-1:three_prime_utr;Parent=Msa1154820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
