AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074780 MtrunA17_Chr1g0182791 93.382 544 24 3 1 542 1 534 0.0 1006
Msa0074780 MtrunA17_Chr7g0262691 63.284 335 86 12 208 530 146 455 1.83e-111 340
Msa0074780 MtrunA17_Chr3g0095391 30.515 544 270 19 1 516 1 464 6.75e-54 189
Msa0074780 MtrunA17_Chr1g0193321 60.403 149 55 2 263 407 398 546 1.06e-42 162
Msa0074780 MtrunA17_Chr7g0271251 50.867 173 73 3 268 428 373 545 1.18e-35 141
Msa0074780 MtrunA17_Chr1g0153241 67.949 78 23 1 325 400 85 162 1.55e-26 108
Msa0074780 MtrunA17_Chr7g0270871 56.000 100 40 1 295 390 168 267 1.08e-24 105
Msa0074780 MtrunA17_Chr5g0402031 74.627 67 15 1 334 398 114 180 4.19e-24 103
Msa0074780 MtrunA17_Chr7g0231461 63.291 79 26 1 309 387 284 359 1.47e-22 100
Msa0074780 MtrunA17_Chr4g0074161 53.165 79 33 1 320 394 201 279 2.46e-18 87.4
Msa0074780 MtrunA17_Chr1g0190731 48.101 79 37 1 327 401 195 273 2.76e-17 83.6
Msa0074780 MtrunA17_Chr3g0144641 36.923 130 72 5 327 448 193 320 6.33e-16 79.7
Msa0074780 MtrunA17_Chr1g0152131 40.000 115 55 5 327 433 262 370 1.26e-15 79.3
Msa0074780 MtrunA17_Chr8g0363921 46.341 82 42 2 327 406 153 234 5.96e-15 75.5
Msa0074780 MtrunA17_Chr8g0339091 31.282 195 97 7 214 389 180 356 1.10e-14 76.6
Msa0074780 MtrunA17_Chr7g0234761 50.725 69 33 1 327 394 319 387 1.46e-14 76.3
Msa0074780 MtrunA17_Chr5g0415291 33.537 164 96 4 245 406 43 195 1.52e-14 73.6
Msa0074780 MtrunA17_Chr3g0131771 49.315 73 36 1 327 398 149 221 1.83e-14 74.7
Msa0074780 MtrunA17_Chr4g0035101 54.688 64 28 1 327 389 145 208 2.00e-14 74.7
Msa0074780 MtrunA17_Chr5g0421111 54.688 64 28 1 327 389 367 430 4.09e-14 75.1
Msa0074780 MtrunA17_Chr8g0365941 54.688 64 28 1 327 389 307 370 4.57e-14 74.7
Msa0074780 MtrunA17_Chr6g0484271 45.570 79 42 1 312 389 142 220 5.20e-14 72.4
Msa0074780 MtrunA17_Chr8g0385911 45.946 74 38 2 327 398 147 220 7.84e-14 72.8
Msa0074780 MtrunA17_Chr1g0174161 39.773 88 51 2 327 412 162 249 8.28e-14 72.8
Msa0074780 MtrunA17_Chr5g0393721 33.333 114 65 1 323 436 222 324 1.14e-13 72.4
Msa0074780 MtrunA17_Chr1g0207311 34.286 105 55 2 319 418 185 280 3.55e-13 70.1
Msa0074780 MtrunA17_Chr3g0134741 32.727 110 59 2 323 432 227 321 6.54e-13 70.1
Msa0074780 MtrunA17_Chr7g0258161 37.037 108 65 3 327 431 175 282 3.71e-12 67.8
Msa0074780 MtrunA17_Chr1g0152651 45.455 66 36 0 323 388 272 337 5.03e-12 67.8
Msa0074780 MtrunA17_Chr1g0207301 31.313 99 59 1 322 420 285 374 5.30e-11 64.7
Msa0074780 MtrunA17_Chr1g0184841 48.611 72 33 1 327 394 122 193 8.18e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074780 AT2G20180.4 40.185 540 205 25 1 516 1 446 5.42e-78 253
Msa0074780 AT2G20180.6 40.185 540 205 25 1 516 1 446 5.42e-78 253
Msa0074780 AT2G20180.2 40.185 540 205 25 1 516 1 446 5.42e-78 253
Msa0074780 AT2G20180.3 40.185 540 205 25 1 516 1 446 5.42e-78 253
Msa0074780 AT2G20180.7 41.295 448 164 19 86 516 10 375 1.34e-66 221
Msa0074780 AT2G20180.1 41.295 448 164 19 86 516 10 375 1.34e-66 221
Msa0074780 AT2G20180.5 41.295 448 164 19 86 516 10 375 1.34e-66 221
Msa0074780 AT2G20180.8 38.971 408 158 19 1 386 1 339 1.90e-56 192
Msa0074780 AT4G28800.1 32.049 493 227 16 29 511 17 411 2.49e-53 187
Msa0074780 AT4G28800.2 31.717 495 226 17 26 511 26 417 1.19e-49 177
Msa0074780 AT4G28790.1 33.962 424 198 14 23 432 16 371 6.08e-46 166
Msa0074780 AT4G28811.1 33.398 518 243 19 31 533 108 538 4.29e-40 153
Msa0074780 AT1G09530.3 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT1G09530.2 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT1G09530.5 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT1G09530.1 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT1G09530.4 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT1G09530.6 33.097 423 207 12 32 409 27 418 1.96e-39 151
Msa0074780 AT4G28790.2 32.258 372 187 10 23 385 16 331 4.25e-35 135
Msa0074780 AT4G28815.2 40.306 196 65 7 322 517 65 208 4.17e-31 121
Msa0074780 AT2G46970.2 52.206 136 52 3 291 421 155 282 5.88e-31 124
Msa0074780 AT2G46970.3 52.206 136 52 3 291 421 164 291 7.01e-31 124
Msa0074780 AT2G46970.1 52.206 136 52 3 291 421 186 313 7.20e-31 125
Msa0074780 AT4G28815.1 40.306 196 65 7 322 517 141 284 2.85e-30 120
Msa0074780 AT3G59060.3 40.343 233 113 7 291 504 211 436 5.60e-29 120
Msa0074780 AT3G59060.2 40.343 233 113 7 291 504 211 436 5.60e-29 120
Msa0074780 AT3G59060.4 40.343 233 113 7 291 504 211 436 5.60e-29 120
Msa0074780 AT3G59060.1 52.482 141 52 4 291 416 211 351 1.32e-28 119
Msa0074780 AT5G67110.1 55.446 101 41 2 303 401 67 165 7.56e-26 105
Msa0074780 AT4G36930.1 62.376 101 36 1 302 400 168 268 1.09e-25 109
Msa0074780 AT2G43010.1 56.557 122 40 3 292 405 223 339 1.47e-24 106
Msa0074780 AT2G43010.2 56.557 122 40 3 292 405 223 339 1.52e-24 106
Msa0074780 AT2G43010.4 65.263 95 25 2 319 405 245 339 1.60e-24 106
Msa0074780 AT2G43010.3 56.557 122 40 3 292 405 230 346 1.86e-24 106
Msa0074780 AT2G43010.5 56.557 122 40 3 292 405 265 381 2.92e-24 106
Msa0074780 AT4G00050.2 65.753 73 25 0 316 388 96 168 2.61e-23 100
Msa0074780 AT4G00050.3 65.753 73 25 0 316 388 198 270 6.22e-23 101
Msa0074780 AT4G00050.1 65.753 73 25 0 316 388 198 270 7.25e-23 101
Msa0074780 AT5G50915.3 34.783 207 101 8 262 446 67 261 4.92e-20 90.5
Msa0074780 AT5G50915.4 34.783 207 101 8 262 446 67 261 4.92e-20 90.5
Msa0074780 AT2G24260.2 58.571 70 29 0 320 389 30 99 7.86e-20 89.4
Msa0074780 AT5G50915.1 34.783 207 101 8 262 446 67 261 9.33e-20 90.1
Msa0074780 AT5G50915.2 34.783 207 101 8 262 446 67 261 9.33e-20 90.1
Msa0074780 AT3G62090.1 49.485 97 44 2 327 421 167 260 2.44e-19 90.1
Msa0074780 AT2G24260.1 58.571 70 29 0 320 389 133 202 2.81e-19 89.7
Msa0074780 AT3G62090.2 49.485 97 44 2 327 421 184 277 4.70e-19 89.4
Msa0074780 AT4G30980.1 60.317 63 25 0 327 389 132 194 1.83e-18 86.7
Msa0074780 AT5G58010.1 60.317 63 25 0 327 389 101 163 1.94e-18 86.7
Msa0074780 AT4G30980.2 60.317 63 25 0 327 389 180 242 4.91e-18 86.3
Msa0074780 AT1G02340.1 39.130 138 71 7 339 471 141 270 8.70e-17 81.6
Msa0074780 AT1G02340.2 39.130 138 71 7 339 471 134 263 1.00e-16 81.3
Msa0074780 AT1G59640.1 30.481 187 111 5 227 406 45 219 4.70e-16 79.0
Msa0074780 AT5G61270.2 40.323 124 65 2 279 401 34 149 5.08e-16 79.0
Msa0074780 AT5G61270.3 40.323 124 65 2 279 401 34 149 5.08e-16 79.0
Msa0074780 AT5G61270.1 40.323 124 65 2 279 401 122 237 1.38e-15 79.0
Msa0074780 AT1G59640.2 38.519 135 68 5 280 406 92 219 8.76e-15 76.3
Msa0074780 AT1G26260.4 38.017 121 72 2 272 389 168 288 1.21e-14 76.3
Msa0074780 AT1G26260.1 38.017 121 72 2 272 389 168 288 1.21e-14 76.3
Msa0074780 AT1G26260.6 38.017 121 72 2 272 389 168 288 1.21e-14 76.3
Msa0074780 AT1G26260.2 38.017 121 72 2 272 389 168 288 1.21e-14 76.3
Msa0074780 AT4G36540.2 50.725 69 33 1 327 394 143 211 1.25e-14 75.1
Msa0074780 AT4G36540.1 50.725 69 33 1 327 394 143 211 1.27e-14 75.1
Msa0074780 AT1G26260.5 38.017 121 72 2 272 389 146 266 1.44e-14 75.9
Msa0074780 AT4G34530.1 41.053 95 54 2 301 394 149 242 1.45e-14 75.5
Msa0074780 AT1G26260.3 36.508 126 77 2 272 394 117 242 1.47e-14 75.5
Msa0074780 AT1G10120.2 50.725 69 33 1 327 394 208 276 1.91e-14 75.5
Msa0074780 AT1G10120.1 50.725 69 33 1 327 394 208 276 1.91e-14 75.5
Msa0074780 AT1G68920.1 50.725 69 33 1 327 394 305 373 2.18e-14 76.3
Msa0074780 AT1G68920.4 50.725 69 33 1 327 394 305 373 2.18e-14 76.3
Msa0074780 AT1G68920.2 50.725 69 33 1 327 394 305 373 2.18e-14 76.3
Msa0074780 AT1G68920.3 50.725 69 33 1 327 394 304 372 2.25e-14 76.3
Msa0074780 AT3G07340.2 50.725 69 33 1 327 394 260 328 2.31e-14 75.9
Msa0074780 AT3G07340.1 50.725 69 33 1 327 394 260 328 2.95e-14 75.5
Msa0074780 AT5G48560.2 54.688 64 28 1 327 389 303 366 2.99e-14 75.5
Msa0074780 AT5G62610.2 50.725 69 33 1 327 394 155 223 3.01e-14 73.9
Msa0074780 AT5G62610.1 50.725 69 33 1 327 394 155 223 3.01e-14 73.9
Msa0074780 AT5G48560.1 54.688 64 28 1 327 389 303 366 3.42e-14 75.5
Msa0074780 AT2G18300.1 47.826 69 35 1 327 394 187 255 8.07e-14 73.2
Msa0074780 AT2G18300.2 47.826 69 35 1 327 394 187 255 8.14e-14 73.2
Msa0074780 AT3G23690.1 47.826 69 35 1 327 394 193 261 9.32e-14 73.6
Msa0074780 AT2G18300.3 47.826 69 35 1 327 394 187 255 1.38e-13 72.8
Msa0074780 AT2G14760.1 36.735 98 53 1 323 420 235 323 1.46e-13 72.4
Msa0074780 AT1G25330.1 50.000 64 31 1 327 389 106 169 2.29e-13 70.1
Msa0074780 AT1G73830.2 48.438 64 32 1 327 389 149 212 4.45e-13 70.1
Msa0074780 AT1G73830.1 48.438 64 32 1 327 389 149 212 4.73e-13 69.7
Msa0074780 AT4G33880.1 38.298 94 49 1 323 416 264 348 6.35e-13 70.9
Msa0074780 AT1G18400.2 48.438 64 32 1 327 389 147 210 6.74e-13 69.3
Msa0074780 AT1G18400.1 48.438 64 32 1 327 389 147 210 8.24e-13 69.3
Msa0074780 AT3G57800.2 51.562 64 30 1 327 389 206 269 8.82e-13 70.5
Msa0074780 AT4G28790.6 27.439 328 173 10 23 341 16 287 9.47e-13 69.7
Msa0074780 AT4G28790.3 27.439 328 173 10 23 341 16 287 9.47e-13 69.7
Msa0074780 AT4G28790.4 27.439 328 173 10 23 341 16 287 9.47e-13 69.7
Msa0074780 AT2G42300.4 46.377 69 36 1 327 394 187 255 1.03e-12 68.9
Msa0074780 AT1G27740.1 44.776 67 37 0 322 388 164 230 1.24e-12 68.6
Msa0074780 AT2G42300.1 46.377 69 36 1 327 394 187 255 1.46e-12 69.3
Msa0074780 AT5G43175.1 36.667 90 48 1 327 416 134 214 4.43e-12 66.2
Msa0074780 AT1G68240.1 41.111 90 52 1 311 399 47 136 4.72e-12 65.5
Msa0074780 AT1G68240.2 41.111 90 52 1 311 399 47 136 7.42e-12 64.7
Msa0074780 AT2G14760.3 34.021 97 55 1 324 420 249 336 1.29e-11 66.6

Find 180 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTAAATTGGCGGTGGTTT+TGG 0.202001 1_2:+49702691 None:intergenic
ATGGGGATGGGAATGGGTTT+AGG 0.204090 1_2:-49696825 Msa0074780:CDS
TTGCAAATTATAATAATTAT+AGG 0.231223 1_2:+49694912 None:intergenic
GCAACTGTAGCTGGTCCTTT+TGG 0.266955 1_2:-49696723 Msa0074780:CDS
TGCAAATTATAATAATTATA+GGG 0.308298 1_2:+49694913 None:intergenic
CGGCAGGGGTGGCGGCTTCT+CGG 0.320550 1_2:-49702371 Msa0074780:CDS
GGAGAATTAGGCAACATATT+AGG 0.325301 1_2:+49696759 None:intergenic
GCAGAGAACCAAGGGAGTTA+AGG 0.325749 1_2:+49696604 None:intergenic
GGTTTCTTTGAATGATGTAT+AGG 0.327763 1_2:+49702870 None:intergenic
GCTGCTGGCAAAGGAGAATT+AGG 0.328372 1_2:+49696747 None:intergenic
TGGGGATGGGAATGGGTTTA+GGG 0.339637 1_2:-49696824 Msa0074780:CDS
CTCTGAAACTCAGATTCTTC+CGG 0.349431 1_2:+49701937 None:intergenic
ATGGTTGATTTGATTTAGAT+TGG 0.353287 1_2:+49703200 None:intergenic
GTTTCTTTGAATGATGTATA+GGG 0.365818 1_2:+49702871 None:intergenic
ATCCAACATTGAAGCTTTGT+CGG 0.371400 1_2:+49698698 None:intergenic
GTACGCTGCTTCGAGATTAT+CGG 0.371790 1_2:-49702130 Msa0074780:CDS
CTGCAGGAACATGGGGCATA+TGG 0.374715 1_2:+49696676 None:intergenic
GCTTGCATTCTGGATGAATC+AGG 0.377153 1_2:+49696648 None:intergenic
TGGTAAGGATCTGTGAAGTT+TGG 0.382377 1_2:+49696555 None:intergenic
GGTAAGGATCTGTGAAGTTT+GGG 0.385109 1_2:+49696556 None:intergenic
TCCATTTGAATATCGAAATC+TGG 0.386523 1_2:+49702909 None:intergenic
TATAATTTGCAAAGCTTTCG+TGG 0.390673 1_2:-49694901 Msa0074780:three_prime_UTR
CAGAGAACCAAGGGAGTTAA+GGG 0.393263 1_2:+49696605 None:intergenic
TTTATGCCGGCGATGGGAAT+GGG 0.402200 1_2:-49696843 Msa0074780:CDS
TAGAACAGAGAGAGAGATAA+GGG 0.402714 1_2:+49703284 None:intergenic
GGATCTGTGAAGTTTGGGTT+TGG 0.408214 1_2:+49696561 None:intergenic
ATGGGAATGGGGATGGGAAT+GGG 0.415003 1_2:-49696831 Msa0074780:CDS
GGCATAAATTGCTGAATTCC+AGG 0.416047 1_2:+49696858 None:intergenic
TTCTAGCGGGAGTGCTGAAC+CGG 0.418643 1_2:-49702004 Msa0074780:CDS
CTGGCGGTGGTTGTAGTTGC+CGG 0.419365 1_2:+49702657 None:intergenic
AGGAGCGCGACGGCGGAGAC+TGG 0.419387 1_2:-49702099 Msa0074780:CDS
CGAGATTATCGGAAACGATC+AGG 0.421871 1_2:-49702119 Msa0074780:CDS
GAAAAGGAAGGGACGTGAAC+CGG 0.422354 1_2:-49701956 Msa0074780:CDS
GTTCATGCAAGAAGATGAAA+TGG 0.432145 1_2:-49702568 Msa0074780:CDS
GATTCATCCGGCGAGGAAAC+CGG 0.433202 1_2:-49702343 Msa0074780:CDS
CATTCATCAGTCGGAAGCGC+CGG 0.433679 1_2:-49702465 Msa0074780:CDS
TGGATTATCTTGGCTCCCAC+TGG 0.435044 1_2:+49695484 None:intergenic
TCGAGATGAATAGACAAGTA+TGG 0.436194 1_2:+49703181 None:intergenic
AACGAGACCGGCAGGGGTGG+CGG 0.437941 1_2:-49702379 Msa0074780:CDS
TTTGGAATGCGTGATTGATC+TGG 0.440584 1_2:+49696579 None:intergenic
TTAGGCAACATATTAGGAAA+TGG 0.443474 1_2:+49696765 None:intergenic
GGTGGGGACCGAGGTATTGC+TGG 0.446521 1_2:+49696535 None:intergenic
ACATTGCAGGTTAGATTATC+CGG 0.449541 1_2:-49695043 Msa0074780:intron
GGTTTCCTCGCCGGATGAAT+CGG 0.451246 1_2:+49702345 None:intergenic
GATGGGAATGGGGATGGGAA+TGG 0.451351 1_2:-49696832 Msa0074780:CDS
TCTTGGCTCCCACTGGTACC+TGG 0.452130 1_2:+49695491 None:intergenic
TCCAGATTTCGATATTCAAA+TGG 0.453129 1_2:-49702910 Msa0074780:CDS
TAGAACACAGAAACCGGATA+TGG 0.455584 1_2:-49702307 Msa0074780:CDS
ATGGGTTTAGGGATGGAAAT+GGG 0.456164 1_2:-49696813 Msa0074780:CDS
CACCACCATGGCAGCTGCTA+TGG 0.456177 1_2:+49695016 None:intergenic
CGAGAAGCCGCCACCCCTGC+CGG 0.456524 1_2:+49702372 None:intergenic
CAGAATGATAATTACGTGAA+AGG 0.456561 1_2:+49702849 None:intergenic
GTCATTGCAGTTACAAGTGC+AGG 0.457289 1_2:-49698655 Msa0074780:intron
CAGGTGCAGCTGCAGGAACA+TGG 0.457934 1_2:+49696667 None:intergenic
CGTCGCCTGGTTGTTCTAGC+GGG 0.462418 1_2:-49702017 Msa0074780:CDS
ATTTATGCCGGCGATGGGAA+TGG 0.464029 1_2:-49696844 Msa0074780:CDS
GGTGAATAGAACACAGAAAC+CGG 0.465326 1_2:-49702313 Msa0074780:CDS
ATGATACCTATGATGTTTCC+TGG 0.467201 1_2:-49696876 Msa0074780:CDS
GTTCTATTCACCACCATATC+CGG 0.470011 1_2:+49702294 None:intergenic
CCAGCAGCAGCAACTGTAGC+TGG 0.470668 1_2:-49696732 Msa0074780:CDS
CCAGCTACAGTTGCTGCTGC+TGG 0.475321 1_2:+49696732 None:intergenic
GTTCACTTCTCGCATTACTT+TGG 0.477874 1_2:+49702241 None:intergenic
CTTTATGCAGATGATGTCCA+TGG 0.478571 1_2:-49696907 Msa0074780:intron
GATCGAATCTCTCTATGATC+AGG 0.479842 1_2:+49702624 None:intergenic
TTAGGGATGGAAATGGGAAT+GGG 0.480235 1_2:-49696807 Msa0074780:CDS
CATTAATTGCTGCACCTGGT+GGG 0.482274 1_2:+49696518 None:intergenic
TCAGCAATTTATGCCGGCGA+TGG 0.482673 1_2:-49696850 Msa0074780:CDS
GTTCAGCAAACGAGACCGGC+AGG 0.485745 1_2:-49702387 Msa0074780:CDS
CCTGCATTAATTGCTGCACC+TGG 0.485944 1_2:+49696514 None:intergenic
AATGGGTTTAGGGATGGAAA+TGG 0.486555 1_2:-49696814 Msa0074780:CDS
AATCCAGAAAAGCATTAGTC+AGG 0.486715 1_2:-49695467 Msa0074780:intron
ATAGAACAGAGAGAGAGATA+AGG 0.487242 1_2:+49703283 None:intergenic
AACCGGAGTTGGACCGGAAA+AGG 0.489470 1_2:-49701972 Msa0074780:CDS
ATATTAGGAAATGGCATCAC+TGG 0.491333 1_2:+49696774 None:intergenic
TGAATTCCAGGAAACATCAT+AGG 0.491738 1_2:+49696870 None:intergenic
GCCGGCGATGGGAATGGGGA+TGG 0.493972 1_2:-49696838 Msa0074780:CDS
CCCATCCCCATTCCCATCGC+CGG 0.494774 1_2:+49696837 None:intergenic
GTTTGTTCAGCAAACGAGAC+CGG 0.495146 1_2:-49702391 Msa0074780:CDS
ATGACAGTTACGTCGTCGCC+TGG 0.498022 1_2:-49702030 Msa0074780:CDS
CCGGCGATGGGAATGGGGAT+GGG 0.499606 1_2:-49696837 Msa0074780:CDS
AACTCCGGTTCTCTATGAAC+CGG 0.499849 1_2:+49701985 None:intergenic
ACAGTTGCTGCTGCTGGCAA+AGG 0.505523 1_2:+49696738 None:intergenic
GATGAATCAGGTGCAGCTGC+AGG 0.505773 1_2:+49696660 None:intergenic
GTTGTAGTTGCCGGTGCCGA+CGG 0.507949 1_2:+49702666 None:intergenic
ACCATCTCCGGTTTCCTCGC+CGG 0.508019 1_2:+49702336 None:intergenic
GTTCTATTCACCACCATCTC+CGG 0.514131 1_2:+49702324 None:intergenic
GGACCGAGGTATTGCTGGTA+AGG 0.515019 1_2:+49696540 None:intergenic
TGCGTGTGTGTGAGCACCAC+CGG 0.519164 1_2:-49702075 Msa0074780:CDS
AGGAATCACGCGACTGGCGG+TGG 0.519980 1_2:+49702644 None:intergenic
TGGAATTCAGCAATTTATGC+CGG 0.522421 1_2:-49696856 Msa0074780:CDS
CTGAAATCGTGACGGTTGAA+AGG 0.522705 1_2:+49702504 None:intergenic
ATTTAGAAAACCGTCGGCAC+CGG 0.522972 1_2:-49702676 Msa0074780:CDS
ATAGCGAACCTTGGTCCAAA+AGG 0.525545 1_2:+49696708 None:intergenic
TAAACTAAGATTAATTTGTG+TGG 0.526418 1_2:+49703107 None:intergenic
GCAACAAGACGATGAGATCA+TGG 0.527589 1_2:-49702751 Msa0074780:CDS
TTCTCGGCCTCCGATTCATC+CGG 0.528261 1_2:-49702355 Msa0074780:CDS
AGGTGCAGCTGCAGGAACAT+GGG 0.528619 1_2:+49696668 None:intergenic
TTTAGGGATGGAAATGGGAA+TGG 0.534529 1_2:-49696808 Msa0074780:CDS
ATGGAACTATTGTGGCAAAA+CGG 0.535259 1_2:-49702732 Msa0074780:CDS
ATAGAGAACCGGAGTTGGAC+CGG 0.535858 1_2:-49701978 Msa0074780:CDS
GTCAACAGACCAGGTACCAG+TGG 0.537139 1_2:-49695500 Msa0074780:CDS
CAGCAATTTATGCCGGCGAT+GGG 0.537150 1_2:-49696849 Msa0074780:CDS
AACACCGCCGTGTTTCTGAC+CGG 0.541272 1_2:+49702446 None:intergenic
TCAGCAAACGAGACCGGCAG+GGG 0.544570 1_2:-49702385 Msa0074780:CDS
GCAATACCTCGGTCCCCACC+AGG 0.546189 1_2:-49696532 Msa0074780:CDS
AACGATCAGGAGCGCGACGG+CGG 0.546234 1_2:-49702106 Msa0074780:CDS
AACTAACATGTAAATTATTG+TGG 0.548487 1_2:-49694936 Msa0074780:three_prime_UTR
ATTCATGTAGTTATCTGCAT+CGG 0.548506 1_2:+49702599 None:intergenic
GTCCGACAAAGCTTCAATGT+TGG 0.553364 1_2:-49698700 Msa0074780:CDS
ATTAATTGCTGCACCTGGTG+GGG 0.553799 1_2:+49696519 None:intergenic
ATCTGGAGGCAGAGAACCAA+GGG 0.555021 1_2:+49696596 None:intergenic
GCATTAATTGCTGCACCTGG+TGG 0.556345 1_2:+49696517 None:intergenic
ATTATGAACCTCTGCAGCAC+GGG 0.558566 1_2:+49698965 None:intergenic
GCAAACGAGACCGGCAGGGG+TGG 0.560535 1_2:-49702382 Msa0074780:CDS
GATGGGAATGGGTTTAGGGA+TGG 0.562444 1_2:-49696820 Msa0074780:CDS
ATGATCAGGAATCACGCGAC+TGG 0.564484 1_2:+49702638 None:intergenic
TGAACCGGTTCATAGAGAAC+CGG 0.564686 1_2:-49701989 Msa0074780:CDS
AGGTATCATGCCACATCCCA+TGG 0.569792 1_2:+49696890 None:intergenic
GCATACCATAGCAGCTGCCA+TGG 0.570284 1_2:-49695021 Msa0074780:three_prime_UTR
GGAACATGGGGCATATGGAA+AGG 0.576243 1_2:+49696681 None:intergenic
ATTTAGATTGGAAGAGTGAG+TGG 0.576472 1_2:+49703212 None:intergenic
AAAGAGATCCCGTGCTGCAG+AGG 0.580112 1_2:-49698973 Msa0074780:CDS
AAACTCCGACTCACGTTCCG+TGG 0.580438 1_2:+49702410 None:intergenic
TTATGCCGGCGATGGGAATG+GGG 0.582904 1_2:-49696842 Msa0074780:CDS
CCAGGTGCAGCAATTAATGC+AGG 0.585533 1_2:-49696514 Msa0074780:intron
GGTTCATAGAGAACCGGAGT+TGG 0.586478 1_2:-49701983 Msa0074780:CDS
TGGCAGCTGCTATGGTATGC+CGG 0.588292 1_2:+49695024 None:intergenic
GGTGCAGCTGCAGGAACATG+GGG 0.593185 1_2:+49696669 None:intergenic
ATGAGATCATGGAACTATTG+TGG 0.596163 1_2:-49702740 Msa0074780:CDS
ACAAGCCACGGAACGTGAGT+CGG 0.600009 1_2:-49702415 Msa0074780:CDS
CAGATGATGTCCATGGGATG+TGG 0.601497 1_2:-49696900 Msa0074780:CDS
ATCGAACTCGAAGATGCACC+TGG 0.602615 1_2:+49702219 None:intergenic
TTCAGCAAACGAGACCGGCA+GGG 0.603612 1_2:-49702386 Msa0074780:CDS
GGCGAGGAAACCGGAGATGG+TGG 0.604411 1_2:-49702334 Msa0074780:CDS
TGCAGCGGCAAGAGAATCGA+CGG 0.605167 1_2:-49702193 Msa0074780:CDS
AGAGAACCAAGGGAGTTAAG+GGG 0.605857 1_2:+49696606 None:intergenic
GCTGCACCTGGTGGGGACCG+AGG 0.609026 1_2:+49696526 None:intergenic
TCCGGCGAGGAAACCGGAGA+TGG 0.609760 1_2:-49702337 Msa0074780:CDS
TTTATGCAGATGATGTCCAT+GGG 0.610157 1_2:-49696906 Msa0074780:intron
GATTATGAACCTCTGCAGCA+CGG 0.610880 1_2:+49698964 None:intergenic
CGGAAAAGCTGCGACGACGT+TGG 0.612425 1_2:-49702055 Msa0074780:CDS
GAATATCGAAATCTGGAACA+TGG 0.612681 1_2:+49702916 None:intergenic
TTCCTCGCCGGATGAATCGG+AGG 0.613809 1_2:+49702348 None:intergenic
TAGATTGGAAGAGTGAGTGG+TGG 0.614629 1_2:+49703215 None:intergenic
AGTAATGCGAGAAGTGAACC+AGG 0.615012 1_2:-49702237 Msa0074780:CDS
AAAGGAGGCATAGCGAACCT+TGG 0.615246 1_2:+49696699 None:intergenic
GGAGTTGGACCGGAAAAGGA+AGG 0.615583 1_2:-49701968 Msa0074780:CDS
AACACAGAAACCGGATATGG+TGG 0.616872 1_2:-49702304 Msa0074780:CDS
TGTTATACAAGCACAAGCCA+CGG 0.625309 1_2:-49702427 Msa0074780:CDS
GGTTCATAATCTCTCAGAGA+GGG 0.625587 1_2:-49698952 Msa0074780:intron
CAGCAAAATGTCAACAGACC+AGG 0.626812 1_2:-49695509 Msa0074780:CDS
ACTTATACCGCGGTGCAACA+AGG 0.628814 1_2:-49698808 Msa0074780:intron
GAGAACCAAGGGAGTTAAGG+GGG 0.629551 1_2:+49696607 None:intergenic
TCGTCGCCTGGTTGTTCTAG+CGG 0.629552 1_2:-49702018 Msa0074780:CDS
GAGTTGGACCGGAAAAGGAA+GGG 0.631011 1_2:-49701967 Msa0074780:CDS
AGAATCTGAGTTTCAGAGCG+AGG 0.634691 1_2:-49701932 Msa0074780:intron
GGAAGCGCCGGTCAGAAACA+CGG 0.635704 1_2:-49702453 Msa0074780:CDS
GGAATGCGTGATTGATCTGG+AGG 0.645810 1_2:+49696582 None:intergenic
TACCATAGCAGCTGCCATGG+TGG 0.647591 1_2:-49695018 Msa0074780:three_prime_UTR
ATCAGGAATCACGCGACTGG+CGG 0.647878 1_2:+49702641 None:intergenic
AAATCGTGACGGTTGAAAGG+AGG 0.650313 1_2:+49702507 None:intergenic
CTTTGCAAGAACTTATACCG+CGG 0.653949 1_2:-49698818 Msa0074780:CDS
GGCCTCCGATTCATCCGGCG+AGG 0.655663 1_2:-49702350 Msa0074780:CDS
ACATGGGGCATATGGAAAGG+AGG 0.660166 1_2:+49696684 None:intergenic
GGAAACGATCAGGAGCGCGA+CGG 0.663906 1_2:-49702109 Msa0074780:CDS
TTCGAGTTCGATGATTGCAG+CGG 0.665279 1_2:-49702208 Msa0074780:CDS
GATCCTTACCAGCAATACCT+CGG 0.665739 1_2:-49696543 Msa0074780:CDS
GATCTGGAGGCAGAGAACCA+AGG 0.671898 1_2:+49696595 None:intergenic
GCACTCCCGCTAGAACAACC+AGG 0.673024 1_2:+49702012 None:intergenic
CCGCCAATTTAGAAAACCGT+CGG 0.675021 1_2:-49702682 Msa0074780:CDS
TCTTTGCAGATGTAGATCCA+CGG 0.678173 1_2:+49698991 None:intergenic
GGTAGATTCATGTGATACGC+CGG 0.678374 1_2:-49702169 Msa0074780:CDS
TCAACAGACCAGGTACCAGT+GGG 0.681572 1_2:-49695499 Msa0074780:CDS
TGTTTCACCTTGTTGCACCG+CGG 0.687099 1_2:+49698801 None:intergenic
AAGAAGATGAAATGGCATCG+TGG 0.726842 1_2:-49702560 Msa0074780:CDS
TTTCTGAACTGAAATCGTGA+CGG 0.732941 1_2:+49702496 None:intergenic
TCTCGCACATTACACCACCA+TGG 0.735384 1_2:+49695004 None:intergenic
AGGTTCATAATCTCTCAGAG+AGG 0.750433 1_2:-49698953 Msa0074780:CDS
AGCGGCAAGAGAATCGACGG+TGG 0.788837 1_2:-49702190 Msa0074780:CDS
AGCGCCGGTCAGAAACACGG+CGG 0.810141 1_2:-49702450 Msa0074780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACAAACAAAAAAAT+CGG + chr1_2:49696292-49696311 None:intergenic 10.0%
!!! AGTTAAATTTGTTTATATTT+AGG + chr1_2:49696776-49696795 None:intergenic 10.0%
!!! TTATTTTTTATTATTGGAAT+CGG - chr1_2:49697097-49697116 Msa0074780:intron 10.0%
!! AGAAAAAAAATTATATGAAA+AGG - chr1_2:49697957-49697976 Msa0074780:intron 10.0%
!! TAAGAATATATATAATAAGT+TGG - chr1_2:49698995-49699014 Msa0074780:CDS 10.0%
!!! TTTTTTTTCTTCTTATAATT+TGG - chr1_2:49700120-49700139 Msa0074780:intron 10.0%
!!! TTTTTTTCTTCTTATAATTT+GGG - chr1_2:49700121-49700140 Msa0074780:intron 10.0%
!! TGCAAATTATAATAATTATA+GGG + chr1_2:49703258-49703277 None:intergenic 10.0%
!! TTGCAAATTATAATAATTAT+AGG + chr1_2:49703259-49703278 None:intergenic 10.0%
!!! AATTTGTTTATATTTAGGAT+CGG + chr1_2:49696771-49696790 None:intergenic 15.0%
!!! TTTTTTAATAGTTGTAAAAG+TGG + chr1_2:49697005-49697024 None:intergenic 15.0%
!!! ATTAACTACATTTATTTTAG+GGG + chr1_2:49697039-49697058 None:intergenic 15.0%
!!! CATTAACTACATTTATTTTA+GGG + chr1_2:49697040-49697059 None:intergenic 15.0%
!!! ACATTAACTACATTTATTTT+AGG + chr1_2:49697041-49697060 None:intergenic 15.0%
!! TATAAGAAAAAACAGTTATT+TGG - chr1_2:49697312-49697331 Msa0074780:intron 15.0%
!! TATATATATATATACACACA+CGG + chr1_2:49697441-49697460 None:intergenic 15.0%
!! TCAATGTTAATTAACTTTAA+TGG - chr1_2:49697702-49697721 Msa0074780:intron 15.0%
!! ACATAGTTATATAAGATATT+TGG - chr1_2:49698647-49698666 Msa0074780:intron 15.0%
!!! TATTTAGATTTTTGTATTTG+TGG - chr1_2:49698890-49698909 Msa0074780:intron 15.0%
!!! ATTTAGATTTTTGTATTTGT+GGG - chr1_2:49698891-49698910 Msa0074780:intron 15.0%
!!! AGTTTTTTTGCTTATATTAT+AGG + chr1_2:49699796-49699815 None:intergenic 15.0%
!!! TTTTTGCTTATATTATAAGA+CGG + chr1_2:49699825-49699844 None:intergenic 15.0%
!! AAAACTAAAACATAAGAATT+TGG + chr1_2:49700085-49700104 None:intergenic 15.0%
!!! ACTTTGTTTATATTTAAGAT+CGG + chr1_2:49701811-49701830 None:intergenic 15.0%
!! TAAACAAAGTAAAATGTATT+TGG - chr1_2:49701821-49701840 Msa0074780:intron 15.0%
!!! ATATCATTTTTGAGATTATA+TGG - chr1_2:49701905-49701924 Msa0074780:intron 15.0%
!!! TATCATTTTTGAGATTATAT+GGG - chr1_2:49701906-49701925 Msa0074780:intron 15.0%
!!! AGTAGTAATAATATTTTGTT+AGG - chr1_2:49702909-49702928 Msa0074780:CDS 15.0%
!!! TAAACTAAGATTAATTTGTG+TGG + chr1_2:49695064-49695083 None:intergenic 20.0%
!! CTATGAAAATTAATTGTAAC+AGG - chr1_2:49695395-49695414 Msa0074780:intron 20.0%
!!! GTTTGTTTATTTTCTTTTTC+TGG - chr1_2:49696300-49696319 Msa0074780:intron 20.0%
!!! ATAAGCAAATTTGACTTTTT+AGG + chr1_2:49696869-49696888 None:intergenic 20.0%
!!! AGTCAAATTTGCTTATATTT+AGG - chr1_2:49696873-49696892 Msa0074780:CDS 20.0%
!! TACCTAACTTATATCATAAA+CGG + chr1_2:49696948-49696967 None:intergenic 20.0%
!!! GACTTATAATCTAAAACTAA+AGG - chr1_2:49697224-49697243 Msa0074780:intron 20.0%
!! TTAAAAAGAGAAAAGATGTT+TGG + chr1_2:49697358-49697377 None:intergenic 20.0%
!! ATAGACTAAAAAAACTTAGA+GGG + chr1_2:49697543-49697562 None:intergenic 20.0%
!! AATAGACTAAAAAAACTTAG+AGG + chr1_2:49697544-49697563 None:intergenic 20.0%
!! TAGTTAACTATTCTCATAAA+TGG + chr1_2:49697604-49697623 None:intergenic 20.0%
!! AAAGAGAGATAAAAAGTTAT+AGG - chr1_2:49698076-49698095 Msa0074780:intron 20.0%
!!! TCAACGTATATATTTTTTCT+TGG + chr1_2:49698213-49698232 None:intergenic 20.0%
!!! AAAAATATATACGTTGATTG+TGG - chr1_2:49698216-49698235 Msa0074780:intron 20.0%
!! TAACATAAACTCATATATGT+AGG + chr1_2:49698568-49698587 None:intergenic 20.0%
!! CTTATATAACTATGTCTATA+TGG + chr1_2:49698642-49698661 None:intergenic 20.0%
!!! TATTTGGACCAATATATTTT+TGG + chr1_2:49698679-49698698 None:intergenic 20.0%
!! ATAAAGAAAATCCAGTTAAA+AGG - chr1_2:49698757-49698776 Msa0074780:intron 20.0%
!! TAAAGAAAATCCAGTTAAAA+GGG - chr1_2:49698758-49698777 Msa0074780:intron 20.0%
!!! GAATATATATAATAAGTTGG+TGG - chr1_2:49698998-49699017 Msa0074780:CDS 20.0%
!!! ATCTGTTTTCAATTTTTCAT+GGG + chr1_2:49699027-49699046 None:intergenic 20.0%
!!! AATCTGTTTTCAATTTTTCA+TGG + chr1_2:49699028-49699047 None:intergenic 20.0%
!!! AAATAACATTTTACTAATGC+TGG - chr1_2:49699392-49699411 Msa0074780:intron 20.0%
!! TTAAAATAACAAAAAGAGTG+TGG + chr1_2:49699649-49699668 None:intergenic 20.0%
!!! TTTTTGCTTATATTATAGGA+CGG + chr1_2:49699792-49699811 None:intergenic 20.0%
!!! GTCTTTTTTGCTTATATTTT+GGG + chr1_2:49699864-49699883 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG + chr1_2:49699865-49699884 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr1_2:49699932-49699951 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + chr1_2:49700019-49700038 None:intergenic 20.0%
!!! TTCTTTGGAAAAAGTTTTAT+AGG + chr1_2:49700044-49700063 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG + chr1_2:49700059-49700078 None:intergenic 20.0%
!!! ATTTTTCTTATAATTGTGAC+TGG + chr1_2:49700219-49700238 None:intergenic 20.0%
!!! TATCATTTCTCTATTTTCAT+TGG + chr1_2:49700403-49700422 None:intergenic 20.0%
!! TGAAAATGTATATTGTTATG+TGG - chr1_2:49700719-49700738 Msa0074780:intron 20.0%
!! TTTAGTATTTACATATTCCA+TGG - chr1_2:49701200-49701219 Msa0074780:intron 20.0%
!! AACAATCATAAATACCATTA+AGG + chr1_2:49701693-49701712 None:intergenic 20.0%
!! TTAATGGTATTTATGATTGT+TGG - chr1_2:49701692-49701711 Msa0074780:intron 20.0%
!!! GGAGTATTATATTATTATGA+TGG + chr1_2:49701786-49701805 None:intergenic 20.0%
!!! TGTTACTTATATTTAAGACA+AGG - chr1_2:49701872-49701891 Msa0074780:intron 20.0%
!!! GTTACTTATATTTAAGACAA+GGG - chr1_2:49701873-49701892 Msa0074780:intron 20.0%
!! AGCAAAAGTCAAAAAATATT+TGG + chr1_2:49702007-49702026 None:intergenic 20.0%
!! TGAACATAATATATGAGAAA+TGG + chr1_2:49702081-49702100 None:intergenic 20.0%
!! AAACAAAGAATCTTTATGTA+AGG - chr1_2:49702499-49702518 Msa0074780:CDS 20.0%
!! AGTGATAATATTAAGTATCA+CGG + chr1_2:49702554-49702573 None:intergenic 20.0%
!!! TAGTGTCTTCTTTTTAAATA+TGG - chr1_2:49702578-49702597 Msa0074780:CDS 20.0%
!!! ATTCTATTTTCAAATCCATT+TGG - chr1_2:49702862-49702881 Msa0074780:intron 20.0%
!! ATAACTCATACATTAATTAG+TGG - chr1_2:49703034-49703053 Msa0074780:intron 20.0%
!! AACTAACATGTAAATTATTG+TGG - chr1_2:49703232-49703251 Msa0074780:five_prime_UTR 20.0%
!!! ATGGTTGATTTGATTTAGAT+TGG + chr1_2:49694971-49694990 None:intergenic 25.0%
! TTAGTTGAATTGAACTGAAA+GGG + chr1_2:49695213-49695232 None:intergenic 25.0%
! TTTAGTTGAATTGAACTGAA+AGG + chr1_2:49695214-49695233 None:intergenic 25.0%
! GTTTCTTTGAATGATGTATA+GGG + chr1_2:49695300-49695319 None:intergenic 25.0%
! CGATCTATTAAATTCAATTC+TGG - chr1_2:49696405-49696424 Msa0074780:intron 25.0%
!!! AAAACTTGTTGATCATGATT+TGG - chr1_2:49696534-49696553 Msa0074780:CDS 25.0%
! GTAAAGTATGAGATTAAGAA+TGG - chr1_2:49696608-49696627 Msa0074780:CDS 25.0%
! CATTCAATTAATGATGTATG+TGG - chr1_2:49696805-49696824 Msa0074780:CDS 25.0%
! GATGTATGTAGTTCATAATA+TGG + chr1_2:49696832-49696851 None:intergenic 25.0%
!! AATTTGCTTATATTTAGGAC+CGG - chr1_2:49696878-49696897 Msa0074780:CDS 25.0%
! GACATATGATAAGACATATA+AGG - chr1_2:49697246-49697265 Msa0074780:intron 25.0%
! TGAGTCATGATATATAAGTA+AGG - chr1_2:49697627-49697646 Msa0074780:intron 25.0%
! AAATTTAGACACATTGTTGT+TGG - chr1_2:49697849-49697868 Msa0074780:intron 25.0%
!! AATTTAGACACATTGTTGTT+GGG - chr1_2:49697850-49697869 Msa0074780:intron 25.0%
! TTAAAATTTGACATCAGACA+AGG + chr1_2:49698439-49698458 None:intergenic 25.0%
! TATTCCTAAAGTGCAAATAA+CGG - chr1_2:49698470-49698489 Msa0074780:intron 25.0%
!! TTTAGCTAATGCATTTGTTA+TGG + chr1_2:49698614-49698633 None:intergenic 25.0%
! GGAGTTAACCAAAAATATAT+TGG - chr1_2:49698668-49698687 Msa0074780:CDS 25.0%
! TATATTGGTCCAAATAGTAA+AGG - chr1_2:49698683-49698702 Msa0074780:CDS 25.0%
! GTGGTGCAAAAAATAAAAAA+GGG + chr1_2:49699081-49699100 None:intergenic 25.0%
! AGAGATAAGTATATTATACG+TGG + chr1_2:49699100-49699119 None:intergenic 25.0%
! GGAAAAACAACATCAAATTA+TGG + chr1_2:49699259-49699278 None:intergenic 25.0%
! ATATGAAAACACTCAGATAT+GGG + chr1_2:49699280-49699299 None:intergenic 25.0%
! AATATGAAAACACTCAGATA+TGG + chr1_2:49699281-49699300 None:intergenic 25.0%
! GGTATTATTTACATGGAAAA+AGG + chr1_2:49699607-49699626 None:intergenic 25.0%
!!! AAACAATTTTCATTGGCTAT+TGG + chr1_2:49700012-49700031 None:intergenic 25.0%
! TTTCTTCTTATAATTTGGGA+CGG - chr1_2:49700125-49700144 Msa0074780:intron 25.0%
! CATTGAATTAATGATGCATA+TGG - chr1_2:49700254-49700273 Msa0074780:intron 25.0%
! CATTCATTAAATGATGTATG+TGG + chr1_2:49700293-49700312 None:intergenic 25.0%
!! ATTTCTCTATTTTCATTGGT+TGG + chr1_2:49700399-49700418 None:intergenic 25.0%
! GTACAAAAATTGTCACAAAA+TGG + chr1_2:49700435-49700454 None:intergenic 25.0%
! AAAATAAACCTTTGTTAGTG+AGG - chr1_2:49700599-49700618 Msa0074780:intron 25.0%
! AGTACATTATCATGGAAAAA+TGG + chr1_2:49700699-49700718 None:intergenic 25.0%
!!! CATTTTCAAGTACATTATCA+TGG + chr1_2:49700707-49700726 None:intergenic 25.0%
! TGCATTGTTTACATAAGAAA+GGG + chr1_2:49700851-49700870 None:intergenic 25.0%
! ATGCATTGTTTACATAAGAA+AGG + chr1_2:49700852-49700871 None:intergenic 25.0%
! AACAAATGATACAAACTCAT+TGG + chr1_2:49701083-49701102 None:intergenic 25.0%
!!! ATATTATTATGATGGATCCA+AGG + chr1_2:49701778-49701797 None:intergenic 25.0%
!! TGTTTATATTTAAGATCGGA+AGG + chr1_2:49701807-49701826 None:intergenic 25.0%
! GAATGTATTTGATCTAAATG+TGG + chr1_2:49701848-49701867 None:intergenic 25.0%
!!! CTTTTGCGTATATTTAAGAT+CGG + chr1_2:49701957-49701976 None:intergenic 25.0%
! ATAATATATGAGAAATGGAG+CGG + chr1_2:49702076-49702095 None:intergenic 25.0%
! TTTCACATTGTTTAGAAAAG+TGG - chr1_2:49702170-49702189 Msa0074780:CDS 25.0%
!! ATTGTTTAGAAAAGTGGTTT+TGG - chr1_2:49702176-49702195 Msa0074780:CDS 25.0%
!! TTGTTTAGAAAAGTGGTTTT+GGG - chr1_2:49702177-49702196 Msa0074780:CDS 25.0%
! ATAGAAAATAGAAGATCCAA+CGG + chr1_2:49702234-49702253 None:intergenic 25.0%
!! ACATATGAGTAATGTTTTCT+CGG - chr1_2:49702362-49702381 Msa0074780:CDS 25.0%
!! CAAAATACTAGTACTTTTAG+AGG + chr1_2:49702472-49702491 None:intergenic 25.0%
!!! CTCTAAAAGTACTAGTATTT+TGG - chr1_2:49702470-49702489 Msa0074780:CDS 25.0%
! AAAGAATCTTTATGTAAGGT+GGG - chr1_2:49702503-49702522 Msa0074780:CDS 25.0%
! TGATAATATTAAGTATCACG+GGG + chr1_2:49702552-49702571 None:intergenic 25.0%
! GTGATAATATTAAGTATCAC+GGG + chr1_2:49702553-49702572 None:intergenic 25.0%
! CAAAGATGTTAACATTTATG+AGG - chr1_2:49702603-49702622 Msa0074780:CDS 25.0%
TCCAGATTTCGATATTCAAA+TGG - chr1_2:49695258-49695277 Msa0074780:intron 30.0%
TCCATTTGAATATCGAAATC+TGG + chr1_2:49695262-49695281 None:intergenic 30.0%
GGTTTCTTTGAATGATGTAT+AGG + chr1_2:49695301-49695320 None:intergenic 30.0%
CAGAATGATAATTACGTGAA+AGG + chr1_2:49695322-49695341 None:intergenic 30.0%
ATTCATGTAGTTATCTGCAT+CGG + chr1_2:49695572-49695591 None:intergenic 30.0%
!!! ACACTTTTTCATTCATCAGT+CGG - chr1_2:49695694-49695713 Msa0074780:intron 30.0%
!! TTTCTTTTTCTGGTGTTTCA+TGG - chr1_2:49696310-49696329 Msa0074780:intron 30.0%
! TTGATCATGATTTGGATGAA+TGG - chr1_2:49696542-49696561 Msa0074780:CDS 30.0%
TACGACAGAAGAAAAAGAAA+AGG + chr1_2:49696591-49696610 None:intergenic 30.0%
ATTAAGAATGGTGTTTGAGT+TGG - chr1_2:49696620-49696639 Msa0074780:CDS 30.0%
ATCCAACAAAAAGTTCAGTT+AGG - chr1_2:49696659-49696678 Msa0074780:CDS 30.0%
! TGTTTATATTTAGGATCGGA+GGG + chr1_2:49696767-49696786 None:intergenic 30.0%
! TTGTTTATATTTAGGATCGG+AGG + chr1_2:49696768-49696787 None:intergenic 30.0%
AGCCGTTTATGATATAAGTT+AGG - chr1_2:49696943-49696962 Msa0074780:intron 30.0%
!! ACTATGGTGTTGCAATTATA+TGG - chr1_2:49697820-49697839 Msa0074780:intron 30.0%
!!! ATCTTTAGTGTCGATTTTAG+TGG - chr1_2:49697912-49697931 Msa0074780:intron 30.0%
!!! TCTTTAGTGTCGATTTTAGT+GGG - chr1_2:49697913-49697932 Msa0074780:intron 30.0%
!! TGGGTTAATTTGCTTTCTTA+TGG - chr1_2:49697932-49697951 Msa0074780:intron 30.0%
GAGATGTAGAGAAATAGTAA+AGG + chr1_2:49697996-49698015 None:intergenic 30.0%
GATAAAAAGTTATAGGAGAG+TGG - chr1_2:49698083-49698102 Msa0074780:intron 30.0%
! AATATATACGTTGATTGTGG+TGG - chr1_2:49698219-49698238 Msa0074780:intron 30.0%
ATTCCTAAAGTGCAAATAAC+GGG - chr1_2:49698471-49698490 Msa0074780:intron 30.0%
! AAGAAGCCTGTTTGTTAAAT+AGG - chr1_2:49698500-49698519 Msa0074780:intron 30.0%
! AGAAGCCTGTTTGTTAAATA+GGG - chr1_2:49698501-49698520 Msa0074780:intron 30.0%
!!! CCTTTTTTTTTAGTACGACA+GGG - chr1_2:49698529-49698548 Msa0074780:intron 30.0%
! ATTACCTTCAGTGTATCTTT+TGG + chr1_2:49698591-49698610 None:intergenic 30.0%
TGACCAAATCCTTTACTATT+TGG + chr1_2:49698695-49698714 None:intergenic 30.0%
GAAAATCTATAAGACACACA+AGG + chr1_2:49698794-49698813 None:intergenic 30.0%
! ATTTTTGTATTTGTGGGACT+AGG - chr1_2:49698897-49698916 Msa0074780:intron 30.0%
CGTGGTGCAAAAAATAAAAA+AGG + chr1_2:49699082-49699101 None:intergenic 30.0%
GTACAGTGGTATTATTTACA+TGG + chr1_2:49699614-49699633 None:intergenic 30.0%
!! TTTTCATTGGCTATTGGTTA+TGG + chr1_2:49700006-49700025 None:intergenic 30.0%
TTCTTATAATTGTGACTGGA+GGG + chr1_2:49700215-49700234 None:intergenic 30.0%
TTTCTTATAATTGTGACTGG+AGG + chr1_2:49700216-49700235 None:intergenic 30.0%
GTTATGCTTATAATAGTGAC+CGG - chr1_2:49700328-49700347 Msa0074780:intron 30.0%
TATCAATATAATACACCCTC+CGG + chr1_2:49700350-49700369 None:intergenic 30.0%
TAATGTGAGTATAAGAGAGA+TGG + chr1_2:49700460-49700479 None:intergenic 30.0%
AAGACAATAGAGAGAGAAAA+AGG + chr1_2:49700502-49700521 None:intergenic 30.0%
! CTCTTTTTCTCTCTTCTTAT+TGG + chr1_2:49700528-49700547 None:intergenic 30.0%
TCACAAAAGTTGTCAGATAT+TGG - chr1_2:49700553-49700572 Msa0074780:intron 30.0%
CATTATCATGGAAAAATGGT+GGG + chr1_2:49700695-49700714 None:intergenic 30.0%
ACATTATCATGGAAAAATGG+TGG + chr1_2:49700696-49700715 None:intergenic 30.0%
TATTGTTATGTGGCTAATGT+TGG - chr1_2:49700729-49700748 Msa0074780:intron 30.0%
! TGAACAGACATTCTTGATTT+TGG - chr1_2:49700893-49700912 Msa0074780:intron 30.0%
TCAGAGACTTTATAAATGGT+GGG + chr1_2:49700933-49700952 None:intergenic 30.0%
AAGCTCAGAGACTTTATAAA+TGG + chr1_2:49700937-49700956 None:intergenic 30.0%
CATTGAGAAACGTAAGATTA+TGG - chr1_2:49700988-49701007 Msa0074780:intron 30.0%
! CAAATCTAAGTTTTCTATGC+AGG - chr1_2:49701016-49701035 Msa0074780:intron 30.0%
AAGTACTAAGTAGTGTACAT+AGG + chr1_2:49701174-49701193 None:intergenic 30.0%
AAAATTACAATACACGACCA+TGG + chr1_2:49701220-49701239 None:intergenic 30.0%
TTAGGCAACATATTAGGAAA+TGG + chr1_2:49701406-49701425 None:intergenic 30.0%
GTAAATAGTATGCTCCTTAA+TGG - chr1_2:49701676-49701695 Msa0074780:intron 30.0%
!! TGTTTAGAAAAGTGGTTTTG+GGG - chr1_2:49702178-49702197 Msa0074780:CDS 30.0%
!! TAAATGAAGAGAAGCATTGA+AGG - chr1_2:49702208-49702227 Msa0074780:CDS 30.0%
CAAAGAATCTTTATGTAAGG+TGG - chr1_2:49702502-49702521 Msa0074780:CDS 30.0%
TGAGGTTCTGTTTACAAATT+TGG - chr1_2:49702621-49702640 Msa0074780:CDS 30.0%
! CTGTTTACAAATTTGGAATC+AGG - chr1_2:49702628-49702647 Msa0074780:CDS 30.0%
! AATGCTTTTCTGGATTATCT+TGG + chr1_2:49702697-49702716 None:intergenic 30.0%
TTAATATCAGAAAACTCCAC+TGG + chr1_2:49702734-49702753 None:intergenic 30.0%
ATTACTACTCATGTAACCAA+AGG + chr1_2:49702898-49702917 None:intergenic 30.0%
AGAACAACTATCGTTAACAA+TGG - chr1_2:49703094-49703113 Msa0074780:five_prime_UTR 30.0%
! TATAATTTGCAAAGCTTTCG+TGG - chr1_2:49703267-49703286 Msa0074780:five_prime_UTR 30.0%
ATAGAACAGAGAGAGAGATA+AGG + chr1_2:49694888-49694907 None:intergenic 35.0%
ATTTAGATTGGAAGAGTGAG+TGG + chr1_2:49694959-49694978 None:intergenic 35.0%
TCGAGATGAATAGACAAGTA+TGG + chr1_2:49694990-49695009 None:intergenic 35.0%
! GAATATCGAAATCTGGAACA+TGG + chr1_2:49695255-49695274 None:intergenic 35.0%
ATGAGATCATGGAACTATTG+TGG - chr1_2:49695428-49695447 Msa0074780:intron 35.0%
ATGGAACTATTGTGGCAAAA+CGG - chr1_2:49695436-49695455 Msa0074780:intron 35.0%
GTTCATGCAAGAAGATGAAA+TGG - chr1_2:49695600-49695619 Msa0074780:intron 35.0%
TTTCTGAACTGAAATCGTGA+CGG + chr1_2:49695675-49695694 None:intergenic 35.0%
! CAATTCTGGATCCAATTTTG+TGG - chr1_2:49696419-49696438 Msa0074780:intron 35.0%
!! GTTACTACTCTAGTTGATAG+CGG - chr1_2:49696475-49696494 Msa0074780:intron 35.0%
! TTGTATCTTCCTTTTACACG+TGG + chr1_2:49696516-49696535 None:intergenic 35.0%
!! GTGTTTGAGTTGGTATTTGT+AGG - chr1_2:49696630-49696649 Msa0074780:CDS 35.0%
! AGCCTAACTGAACTTTTTGT+TGG + chr1_2:49696664-49696683 None:intergenic 35.0%
AATGGTGACACTCTATATAG+AGG - chr1_2:49697720-49697739 Msa0074780:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49697730-49697749 Msa0074780:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49697734-49697753 Msa0074780:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49697730-49697749 Msa0074780:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49697734-49697753 Msa0074780:intron 35.0%
CTTGAGAGTAATACTCTCTA+AGG + chr1_2:49697877-49697896 None:intergenic 35.0%
AGTATTACTCTCAAGATCTC+AGG - chr1_2:49697882-49697901 Msa0074780:intron 35.0%
TTAACATCGTCTTCTCTTGA+TGG + chr1_2:49698057-49698076 None:intergenic 35.0%
TTCAGTATGTTTGGATTCCA+AGG - chr1_2:49698360-49698379 Msa0074780:intron 35.0%
ATTAATTCTTTCCCACTCCT+TGG + chr1_2:49698380-49698399 None:intergenic 35.0%
TGTTCCAAGCAGATTTCATA+CGG + chr1_2:49698416-49698435 None:intergenic 35.0%
TTCCTAAAGTGCAAATAACG+GGG - chr1_2:49698472-49698491 Msa0074780:intron 35.0%
!!! GCCTTTTTTTTTAGTACGAC+AGG - chr1_2:49698528-49698547 Msa0074780:intron 35.0%
CCCTGTCGTACTAAAAAAAA+AGG + chr1_2:49698532-49698551 None:intergenic 35.0%
!!! TTTTTTTTAGTACGACAGGG+TGG - chr1_2:49698532-49698551 Msa0074780:intron 35.0%
GTTACCAAAAGATACACTGA+AGG - chr1_2:49698584-49698603 Msa0074780:intron 35.0%
GGTCCAAATAGTAAAGGATT+TGG - chr1_2:49698689-49698708 Msa0074780:CDS 35.0%
TCCAGTTAAAAGGGAATGAA+TGG - chr1_2:49698767-49698786 Msa0074780:intron 35.0%
! TCCATTCATTCCCTTTTAAC+TGG + chr1_2:49698771-49698790 None:intergenic 35.0%
GATAGAGAGTCACTACTAAA+CGG - chr1_2:49698815-49698834 Msa0074780:CDS 35.0%
AAAAAGGGACAACAAACTCT+TGG + chr1_2:49699066-49699085 None:intergenic 35.0%
!!! TCTGTTTGTTTTGCTGCAAA+AGG - chr1_2:49699117-49699136 Msa0074780:intron 35.0%
!!! AGGATGTCGATTTTGAATGT+CGG - chr1_2:49699137-49699156 Msa0074780:intron 35.0%
GAAGAAAAAAAACAACACCG+TGG - chr1_2:49699160-49699179 Msa0074780:intron 35.0%
! ATCCAACATTGAAGCTTTGT+CGG + chr1_2:49699473-49699492 None:intergenic 35.0%
TAAGAACACATGCAAACTAG+AGG + chr1_2:49699566-49699585 None:intergenic 35.0%
TGCTTATATTATAGGACGGA+GGG + chr1_2:49699788-49699807 None:intergenic 35.0%
TTGCTTATATTATAGGACGG+AGG + chr1_2:49699789-49699808 None:intergenic 35.0%
!! ATTTTCATTGGTTGGTTGGT+GGG + chr1_2:49700391-49700410 None:intergenic 35.0%
!! TATTTTCATTGGTTGGTTGG+TGG + chr1_2:49700392-49700411 None:intergenic 35.0%
!! CTCTATTTTCATTGGTTGGT+TGG + chr1_2:49700395-49700414 None:intergenic 35.0%
TCACGTGGCTAATGTTTATT+GGG - chr1_2:49700658-49700677 Msa0074780:intron 35.0%
! TAATGTTGGTTGGTTGAACA+AGG - chr1_2:49700743-49700762 Msa0074780:intron 35.0%
AGAAAGGGTTGTGTTAATTG+AGG + chr1_2:49700836-49700855 None:intergenic 35.0%
CTCAGAGACTTTATAAATGG+TGG + chr1_2:49700934-49700953 None:intergenic 35.0%
! CTGAGCTTCAAAACAGTTTT+AGG - chr1_2:49700949-49700968 Msa0074780:intron 35.0%
!!! AGCTTCAAAACAGTTTTAGG+AGG - chr1_2:49700952-49700971 Msa0074780:intron 35.0%
! GTACATGCTTTAAGTGCAAA+AGG - chr1_2:49701044-49701063 Msa0074780:intron 35.0%
! TGATACAAACTCATTGGCTA+TGG + chr1_2:49701077-49701096 None:intergenic 35.0%
TTTATGCAGATGATGTCCAT+GGG - chr1_2:49701262-49701281 Msa0074780:intron 35.0%
ATGATACCTATGATGTTTCC+TGG - chr1_2:49701292-49701311 Msa0074780:intron 35.0%
TGAATTCCAGGAAACATCAT+AGG + chr1_2:49701301-49701320 None:intergenic 35.0%
TGGAATTCAGCAATTTATGC+CGG - chr1_2:49701312-49701331 Msa0074780:intron 35.0%
ATATTAGGAAATGGCATCAC+TGG + chr1_2:49701397-49701416 None:intergenic 35.0%
GGAGAATTAGGCAACATATT+AGG + chr1_2:49701412-49701431 None:intergenic 35.0%
! TTGATTTTCTGCTTGCATTC+TGG + chr1_2:49701533-49701552 None:intergenic 35.0%
! TGATTGTTGGACATCTTTTG+AGG - chr1_2:49701705-49701724 Msa0074780:intron 35.0%
! TGCGTATATTTAAGATCGGA+CGG + chr1_2:49701953-49701972 None:intergenic 35.0%
ATTGCATTAAGGGAAGAGTT+AGG + chr1_2:49702441-49702460 None:intergenic 35.0%
GGAGCTAAGAATTGCATTAA+GGG + chr1_2:49702451-49702470 None:intergenic 35.0%
AGGAGCTAAGAATTGCATTA+AGG + chr1_2:49702452-49702471 None:intergenic 35.0%
!! AATCCAGAAAAGCATTAGTC+AGG - chr1_2:49702701-49702720 Msa0074780:CDS 35.0%
! TTACCTGACTAATGCTTTTC+TGG + chr1_2:49702707-49702726 None:intergenic 35.0%
ATGTAACCAAAGGCAAGATT+AGG + chr1_2:49702888-49702907 None:intergenic 35.0%
! AATGGATTTGTGTACATTGC+AGG - chr1_2:49703112-49703131 Msa0074780:five_prime_UTR 35.0%
ACATTGCAGGTTAGATTATC+CGG - chr1_2:49703125-49703144 Msa0074780:five_prime_UTR 35.0%
! TTCTAAATTGGCGGTGGTTT+TGG + chr1_2:49695480-49695499 None:intergenic 40.0%
GATCGAATCTCTCTATGATC+AGG + chr1_2:49695547-49695566 None:intergenic 40.0%
AAGAAGATGAAATGGCATCG+TGG - chr1_2:49695608-49695627 Msa0074780:intron 40.0%
TGTTATACAAGCACAAGCCA+CGG - chr1_2:49695741-49695760 Msa0074780:intron 40.0%
GGTGAATAGAACACAGAAAC+CGG - chr1_2:49695855-49695874 Msa0074780:intron 40.0%
TAGAACACAGAAACCGGATA+TGG - chr1_2:49695861-49695880 Msa0074780:intron 40.0%
GTTCTATTCACCACCATATC+CGG + chr1_2:49695877-49695896 None:intergenic 40.0%
GTTCACTTCTCGCATTACTT+TGG + chr1_2:49695930-49695949 None:intergenic 40.0%
!! TACGTTTTTGCTGTCATGAC+CGG + chr1_2:49696021-49696040 None:intergenic 40.0%
!! CTCTGAAACTCAGATTCTTC+CGG + chr1_2:49696234-49696253 None:intergenic 40.0%
ACACACACTCACCACAAAAT+TGG + chr1_2:49696433-49696452 None:intergenic 40.0%
AGAATTGTGCCACGTGTAAA+AGG - chr1_2:49696504-49696523 Msa0074780:intron 40.0%
! CATGATTTGGATGAATGGAG+CGG - chr1_2:49696547-49696566 Msa0074780:CDS 40.0%
! TTGCTTATATTTAGGACCGG+AGG - chr1_2:49696881-49696900 Msa0074780:CDS 40.0%
! TGCTTATATTTAGGACCGGA+GGG - chr1_2:49696882-49696901 Msa0074780:CDS 40.0%
!!! CACATTGTTTTTACTCCCTC+CGG + chr1_2:49696900-49696919 None:intergenic 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49697745-49697764 Msa0074780:intron 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49697745-49697764 Msa0074780:intron 40.0%
!!! GGATGTTTGGTTTTGCACTA+TGG - chr1_2:49697804-49697823 Msa0074780:intron 40.0%
CTGAAACTCGTCGTATATGT+CGG + chr1_2:49698345-49698364 None:intergenic 40.0%
ACGACGAGTTTCAGTATGTT+TGG - chr1_2:49698351-49698370 Msa0074780:intron 40.0%
TATGTTTGGATTCCAAGGAG+TGG - chr1_2:49698365-49698384 Msa0074780:intron 40.0%
ATGTTTGGATTCCAAGGAGT+GGG - chr1_2:49698366-49698385 Msa0074780:intron 40.0%
AGCAGATTTCATACGGTTTC+TGG + chr1_2:49698409-49698428 None:intergenic 40.0%
GAAACCGTATGAAATCTGCT+TGG - chr1_2:49698409-49698428 Msa0074780:intron 40.0%
TTCCCCGTTATTTGCACTTT+AGG + chr1_2:49698477-49698496 None:intergenic 40.0%
CACGACCCTATTTAACAAAC+AGG + chr1_2:49698509-49698528 None:intergenic 40.0%
! ACGATTCAGAGCAGCATTTT+TGG - chr1_2:49698934-49698953 Msa0074780:intron 40.0%
!!! GGATGTCGATTTTGAATGTC+GGG - chr1_2:49699138-49699157 Msa0074780:intron 40.0%
TCTTTGCAGATGTAGATCCA+CGG + chr1_2:49699180-49699199 None:intergenic 40.0%
AGGTTCATAATCTCTCAGAG+AGG - chr1_2:49699215-49699234 Msa0074780:intron 40.0%
GGTTCATAATCTCTCAGAGA+GGG - chr1_2:49699216-49699235 Msa0074780:intron 40.0%
CTTTGCAAGAACTTATACCG+CGG - chr1_2:49699350-49699369 Msa0074780:intron 40.0%
GGACTTGTCTAATAGTACAG+TGG + chr1_2:49699628-49699647 None:intergenic 40.0%
ATGCTTATAATAGTGACCGG+AGG - chr1_2:49700331-49700350 Msa0074780:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_2:49700332-49700351 Msa0074780:intron 40.0%
ACCTTTGTTAGTGAGGTCAA+TGG - chr1_2:49700606-49700625 Msa0074780:intron 40.0%
ACCATTGACCTCACTAACAA+AGG + chr1_2:49700610-49700629 None:intergenic 40.0%
TGAGGTCAATGGTACTTTGT+GGG - chr1_2:49700617-49700636 Msa0074780:intron 40.0%
CTCACGTGGCTAATGTTTAT+TGG - chr1_2:49700657-49700676 Msa0074780:intron 40.0%
GTTATGTGGCTAATGTTGGT+TGG - chr1_2:49700733-49700752 Msa0074780:intron 40.0%
AACAATGCATCAAGTACCAG+TGG - chr1_2:49700862-49700881 Msa0074780:intron 40.0%
!!! TCTGTTCATGTTTTGACCAC+TGG + chr1_2:49700881-49700900 None:intergenic 40.0%
! ATGCTTTAAGTGCAAAAGGC+AGG - chr1_2:49701048-49701067 Msa0074780:intron 40.0%
! TGCTTTAAGTGCAAAAGGCA+GGG - chr1_2:49701049-49701068 Msa0074780:intron 40.0%
CTTTATGCAGATGATGTCCA+TGG - chr1_2:49701261-49701280 Msa0074780:intron 40.0%
GGCATAAATTGCTGAATTCC+AGG + chr1_2:49701313-49701332 None:intergenic 40.0%
! AATGGGTTTAGGGATGGAAA+TGG - chr1_2:49701354-49701373 Msa0074780:intron 40.0%
ATGGGTTTAGGGATGGAAAT+GGG - chr1_2:49701355-49701374 Msa0074780:intron 40.0%
TTTAGGGATGGAAATGGGAA+TGG - chr1_2:49701360-49701379 Msa0074780:intron 40.0%
TTAGGGATGGAAATGGGAAT+GGG - chr1_2:49701361-49701380 Msa0074780:intron 40.0%
! TTTGGAATGCGTGATTGATC+TGG + chr1_2:49701592-49701611 None:intergenic 40.0%
GGTAAGGATCTGTGAAGTTT+GGG + chr1_2:49701615-49701634 None:intergenic 40.0%
TGGTAAGGATCTGTGAAGTT+TGG + chr1_2:49701616-49701635 None:intergenic 40.0%
TCCAACACCCTTCATCAATA+AGG - chr1_2:49702109-49702128 Msa0074780:CDS 40.0%
! TCCTTATTGATGAAGGGTGT+TGG + chr1_2:49702113-49702132 None:intergenic 40.0%
AACACCCTTCATCAATAAGG+AGG - chr1_2:49702112-49702131 Msa0074780:CDS 40.0%
CTCTCCTCCTTATTGATGAA+GGG + chr1_2:49702119-49702138 None:intergenic 40.0%
CTTCATCAATAAGGAGGAGA+GGG - chr1_2:49702118-49702137 Msa0074780:CDS 40.0%
GGAGAGGGAAGAATATCTTT+AGG - chr1_2:49702133-49702152 Msa0074780:CDS 40.0%
!!! TTAGAAAAGTGGTTTTGGGG+AGG - chr1_2:49702181-49702200 Msa0074780:CDS 40.0%
TTAGTCAGGTAAAATGCCAG+TGG - chr1_2:49702715-49702734 Msa0074780:CDS 40.0%
AAAGGCAAGATTAGGCCAAA+TGG + chr1_2:49702880-49702899 None:intergenic 40.0%
ATTTGGCCTAATCTTGCCTT+TGG - chr1_2:49702879-49702898 Msa0074780:CDS 40.0%
TGAGCTGAACGAATAGTCAT+TGG + chr1_2:49702986-49703005 None:intergenic 40.0%
TAGATTGGAAGAGTGAGTGG+TGG + chr1_2:49694956-49694975 None:intergenic 45.0%
GCAACAAGACGATGAGATCA+TGG - chr1_2:49695417-49695436 Msa0074780:intron 45.0%
! ACGGTTTTCTAAATTGGCGG+TGG + chr1_2:49695486-49695505 None:intergenic 45.0%
! CCGACGGTTTTCTAAATTGG+CGG + chr1_2:49695489-49695508 None:intergenic 45.0%
CCGCCAATTTAGAAAACCGT+CGG - chr1_2:49695486-49695505 Msa0074780:CDS 45.0%
!! GTGCCGACGGTTTTCTAAAT+TGG + chr1_2:49695492-49695511 None:intergenic 45.0%
ATTTAGAAAACCGTCGGCAC+CGG - chr1_2:49695492-49695511 Msa0074780:CDS 45.0%
AAATCGTGACGGTTGAAAGG+AGG + chr1_2:49695664-49695683 None:intergenic 45.0%
CTGAAATCGTGACGGTTGAA+AGG + chr1_2:49695667-49695686 None:intergenic 45.0%
GTTTGTTCAGCAAACGAGAC+CGG - chr1_2:49695777-49695796 Msa0074780:intron 45.0%
GTTCTATTCACCACCATCTC+CGG + chr1_2:49695847-49695866 None:intergenic 45.0%
AACACAGAAACCGGATATGG+TGG - chr1_2:49695864-49695883 Msa0074780:intron 45.0%
AGTAATGCGAGAAGTGAACC+AGG - chr1_2:49695931-49695950 Msa0074780:intron 45.0%
! TTCGAGTTCGATGATTGCAG+CGG - chr1_2:49695960-49695979 Msa0074780:intron 45.0%
GGTAGATTCATGTGATACGC+CGG - chr1_2:49695999-49696018 Msa0074780:intron 45.0%
GTACGCTGCTTCGAGATTAT+CGG - chr1_2:49696038-49696057 Msa0074780:intron 45.0%
CGAGATTATCGGAAACGATC+AGG - chr1_2:49696049-49696068 Msa0074780:intron 45.0%
! TGAACCGGTTCATAGAGAAC+CGG - chr1_2:49696179-49696198 Msa0074780:intron 45.0%
AACTCCGGTTCTCTATGAAC+CGG + chr1_2:49696186-49696205 None:intergenic 45.0%
AGAATCTGAGTTTCAGAGCG+AGG - chr1_2:49696236-49696255 Msa0074780:intron 45.0%
TCATCAGCGCACAATAGACA+AGG + chr1_2:49696336-49696355 None:intergenic 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49697737-49697756 Msa0074780:intron 45.0%
GGTGGTGACACTCTATATAG+AGG - chr1_2:49697766-49697785 Msa0074780:intron 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49697737-49697756 Msa0074780:intron 45.0%
AAACCCTATGTGACTTGACG+CGG - chr1_2:49698265-49698284 Msa0074780:intron 45.0%
ATTATGAACCTCTGCAGCAC+GGG + chr1_2:49699206-49699225 None:intergenic 45.0%
GATTATGAACCTCTGCAGCA+CGG + chr1_2:49699207-49699226 None:intergenic 45.0%
GTCCGACAAAGCTTCAATGT+TGG - chr1_2:49699468-49699487 Msa0074780:intron 45.0%
GTCATTGCAGTTACAAGTGC+AGG - chr1_2:49699513-49699532 Msa0074780:intron 45.0%
GTGAGGTCAATGGTACTTTG+TGG - chr1_2:49700616-49700635 Msa0074780:intron 45.0%
!! CACGTGAGTACATTTTCAGG+TGG + chr1_2:49700645-49700664 None:intergenic 45.0%
CACCTGAAAATGTACTCACG+TGG - chr1_2:49700643-49700662 Msa0074780:intron 45.0%
! AGCCACGTGAGTACATTTTC+AGG + chr1_2:49700648-49700667 None:intergenic 45.0%
CGTGGCTAATGTTTATTGGG+TGG - chr1_2:49700661-49700680 Msa0074780:intron 45.0%
ATGCTTGCATCAACTTCTGG+TGG - chr1_2:49700767-49700786 Msa0074780:intron 45.0%
ATAGCGAACCTTGGTCCAAA+AGG + chr1_2:49701463-49701482 None:intergenic 45.0%
GCTTGCATTCTGGATGAATC+AGG + chr1_2:49701523-49701542 None:intergenic 45.0%
AGAGAACCAAGGGAGTTAAG+GGG + chr1_2:49701565-49701584 None:intergenic 45.0%
CAGAGAACCAAGGGAGTTAA+GGG + chr1_2:49701566-49701585 None:intergenic 45.0%
! GGATCTGTGAAGTTTGGGTT+TGG + chr1_2:49701610-49701629 None:intergenic 45.0%
GATCCTTACCAGCAATACCT+CGG - chr1_2:49701625-49701644 Msa0074780:intron 45.0%
ATTAATTGCTGCACCTGGTG+GGG + chr1_2:49701652-49701671 None:intergenic 45.0%
CATTAATTGCTGCACCTGGT+GGG + chr1_2:49701653-49701672 None:intergenic 45.0%
ATGGATCCAAGGTGAAATGC+AGG + chr1_2:49701767-49701786 None:intergenic 45.0%
TTAAGATCGGACGGAGTATG+TGG + chr1_2:49701944-49701963 None:intergenic 45.0%
CCTCTCCTCCTTATTGATGA+AGG + chr1_2:49702120-49702139 None:intergenic 45.0%
CCTTCATCAATAAGGAGGAG+AGG - chr1_2:49702117-49702136 Msa0074780:CDS 45.0%
TGCTATATAGCACGACACGA+AGG + chr1_2:49702326-49702345 None:intergenic 45.0%
GCATTAAGGGAAGAGTTAGG+AGG + chr1_2:49702438-49702457 None:intergenic 45.0%
!!! GGTGGGTGACATTTTGACTT+TGG - chr1_2:49702520-49702539 Msa0074780:CDS 45.0%
! CTGGTCTGTTGACATTTTGC+TGG + chr1_2:49702661-49702680 None:intergenic 45.0%
CAGCAAAATGTCAACAGACC+AGG - chr1_2:49702659-49702678 Msa0074780:CDS 45.0%
!!! ACAAAATTATTTTTTATTAT+TGG - chr1_2:49697091-49697110 Msa0074780:intron 5.0%
!! AAAAAAAAAAAAGATTAAAT+AGG + chr1_2:49699897-49699916 None:intergenic 5.0%
!! ATTATATTGATATTATAAAA+TGG - chr1_2:49700358-49700377 Msa0074780:intron 5.0%
ATGATCAGGAATCACGCGAC+TGG + chr1_2:49695533-49695552 None:intergenic 50.0%
ATCGAACTCGAAGATGCACC+TGG + chr1_2:49695952-49695971 None:intergenic 50.0%
GGTTCATAGAGAACCGGAGT+TGG - chr1_2:49696185-49696204 Msa0074780:intron 50.0%
ATAGAGAACCGGAGTTGGAC+CGG - chr1_2:49696190-49696209 Msa0074780:intron 50.0%
! TTCCTTTTCCGGTCCAACTC+CGG + chr1_2:49696201-49696220 None:intergenic 50.0%
GAGTTGGACCGGAAAAGGAA+GGG - chr1_2:49696201-49696220 Msa0074780:intron 50.0%
! GTTCACGTCCCTTCCTTTTC+CGG + chr1_2:49696212-49696231 None:intergenic 50.0%
GAAAAGGAAGGGACGTGAAC+CGG - chr1_2:49696212-49696231 Msa0074780:intron 50.0%
ACAGGAAGGAGGATGTTTGG+TGG - chr1_2:49697748-49697767 Msa0074780:intron 50.0%
CTTCCGCGTCAAGTCACATA+GGG + chr1_2:49698271-49698290 None:intergenic 50.0%
TCTTCCGCGTCAAGTCACAT+AGG + chr1_2:49698272-49698291 None:intergenic 50.0%
ACTTATACCGCGGTGCAACA+AGG - chr1_2:49699360-49699379 Msa0074780:intron 50.0%
TGTTTCACCTTGTTGCACCG+CGG + chr1_2:49699370-49699389 None:intergenic 50.0%
GGCATGCTTGCATCAACTTC+TGG - chr1_2:49700764-49700783 Msa0074780:intron 50.0%
GGGTTGTGTTAATTGAGGCG+AGG + chr1_2:49700831-49700850 None:intergenic 50.0%
CAGATGATGTCCATGGGATG+TGG - chr1_2:49701268-49701287 Msa0074780:intron 50.0%
AGGTATCATGCCACATCCCA+TGG + chr1_2:49701281-49701300 None:intergenic 50.0%
TCAGCAATTTATGCCGGCGA+TGG - chr1_2:49701318-49701337 Msa0074780:intron 50.0%
CAGCAATTTATGCCGGCGAT+GGG - chr1_2:49701319-49701338 Msa0074780:intron 50.0%
ATTTATGCCGGCGATGGGAA+TGG - chr1_2:49701324-49701343 Msa0074780:intron 50.0%
TTTATGCCGGCGATGGGAAT+GGG - chr1_2:49701325-49701344 Msa0074780:intron 50.0%
ATGGGAATGGGGATGGGAAT+GGG - chr1_2:49701337-49701356 Msa0074780:intron 50.0%
! ATGGGGATGGGAATGGGTTT+AGG - chr1_2:49701343-49701362 Msa0074780:intron 50.0%
! TGGGGATGGGAATGGGTTTA+GGG - chr1_2:49701344-49701363 Msa0074780:intron 50.0%
! GATGGGAATGGGTTTAGGGA+TGG - chr1_2:49701348-49701367 Msa0074780:intron 50.0%
GCTGCTGGCAAAGGAGAATT+AGG + chr1_2:49701424-49701443 None:intergenic 50.0%
! GCAACTGTAGCTGGTCCTTT+TGG - chr1_2:49701445-49701464 Msa0074780:intron 50.0%
! TAGCTGGTCCTTTTGGACCA+AGG - chr1_2:49701452-49701471 Msa0074780:intron 50.0%
! AAAGGAGGCATAGCGAACCT+TGG + chr1_2:49701472-49701491 None:intergenic 50.0%
ACATGGGGCATATGGAAAGG+AGG + chr1_2:49701487-49701506 None:intergenic 50.0%
GGAACATGGGGCATATGGAA+AGG + chr1_2:49701490-49701509 None:intergenic 50.0%
GAGAACCAAGGGAGTTAAGG+GGG + chr1_2:49701564-49701583 None:intergenic 50.0%
GCAGAGAACCAAGGGAGTTA+AGG + chr1_2:49701567-49701586 None:intergenic 50.0%
ATCTGGAGGCAGAGAACCAA+GGG + chr1_2:49701575-49701594 None:intergenic 50.0%
GGAATGCGTGATTGATCTGG+AGG + chr1_2:49701589-49701608 None:intergenic 50.0%
GCATTAATTGCTGCACCTGG+TGG + chr1_2:49701654-49701673 None:intergenic 50.0%
CCTGCATTAATTGCTGCACC+TGG + chr1_2:49701657-49701676 None:intergenic 50.0%
CCAGGTGCAGCAATTAATGC+AGG - chr1_2:49701654-49701673 Msa0074780:intron 50.0%
AAATGCAGGTGGCAGGAATC+TGG + chr1_2:49701753-49701772 None:intergenic 50.0%
GATCCAAGGTGAAATGCAGG+TGG + chr1_2:49701764-49701783 None:intergenic 50.0%
!! AGAGAAGCATTGAAGGCCGT+TGG - chr1_2:49702215-49702234 Msa0074780:CDS 50.0%
GGCACACGACACAGTAATAG+CGG + chr1_2:49702305-49702324 None:intergenic 50.0%
TCAACAGACCAGGTACCAGT+GGG - chr1_2:49702669-49702688 Msa0074780:CDS 50.0%
TGGATTATCTTGGCTCCCAC+TGG + chr1_2:49702687-49702706 None:intergenic 50.0%
TCTCGCACATTACACCACCA+TGG + chr1_2:49703167-49703186 None:intergenic 50.0%
ATCAGGAATCACGCGACTGG+CGG + chr1_2:49695530-49695549 None:intergenic 55.0%
! CATTCATCAGTCGGAAGCGC+CGG - chr1_2:49695703-49695722 Msa0074780:intron 55.0%
! AACACCGCCGTGTTTCTGAC+CGG + chr1_2:49695725-49695744 None:intergenic 55.0%
ACAAGCCACGGAACGTGAGT+CGG - chr1_2:49695753-49695772 Msa0074780:intron 55.0%
AAACTCCGACTCACGTTCCG+TGG + chr1_2:49695761-49695780 None:intergenic 55.0%
TTCAGCAAACGAGACCGGCA+GGG - chr1_2:49695782-49695801 Msa0074780:intron 55.0%
TTCTCGGCCTCCGATTCATC+CGG - chr1_2:49695813-49695832 Msa0074780:intron 55.0%
GGTTTCCTCGCCGGATGAAT+CGG + chr1_2:49695826-49695845 None:intergenic 55.0%
GATTCATCCGGCGAGGAAAC+CGG - chr1_2:49695825-49695844 Msa0074780:intron 55.0%
TGCAGCGGCAAGAGAATCGA+CGG - chr1_2:49695975-49695994 Msa0074780:intron 55.0%
! CAACGTCGTCGCAGCTTTTC+CGG + chr1_2:49696115-49696134 None:intergenic 55.0%
ATGACAGTTACGTCGTCGCC+TGG - chr1_2:49696138-49696157 Msa0074780:intron 55.0%
TCGTCGCCTGGTTGTTCTAG+CGG - chr1_2:49696150-49696169 Msa0074780:intron 55.0%
!! TTCTAGCGGGAGTGCTGAAC+CGG - chr1_2:49696164-49696183 Msa0074780:intron 55.0%
AACCGGAGTTGGACCGGAAA+AGG - chr1_2:49696196-49696215 Msa0074780:intron 55.0%
GGAGTTGGACCGGAAAAGGA+AGG - chr1_2:49696200-49696219 Msa0074780:intron 55.0%
TGGATGAATGGAGCGGCTTG+TGG - chr1_2:49696554-49696573 Msa0074780:CDS 55.0%
AAAGAGATCCCGTGCTGCAG+AGG - chr1_2:49699195-49699214 Msa0074780:intron 55.0%
TTATGCCGGCGATGGGAATG+GGG - chr1_2:49701326-49701345 Msa0074780:intron 55.0%
GATGGGAATGGGGATGGGAA+TGG - chr1_2:49701336-49701355 Msa0074780:intron 55.0%
ACAGTTGCTGCTGCTGGCAA+AGG + chr1_2:49701433-49701452 None:intergenic 55.0%
CTGCAGGAACATGGGGCATA+TGG + chr1_2:49701495-49701514 None:intergenic 55.0%
AGGTGCAGCTGCAGGAACAT+GGG + chr1_2:49701503-49701522 None:intergenic 55.0%
GATGAATCAGGTGCAGCTGC+AGG + chr1_2:49701511-49701530 None:intergenic 55.0%
GACAACCCCCTTAACTCCCT+TGG - chr1_2:49701556-49701575 Msa0074780:intron 55.0%
GATCTGGAGGCAGAGAACCA+AGG + chr1_2:49701576-49701595 None:intergenic 55.0%
!! GGACCGAGGTATTGCTGGTA+AGG + chr1_2:49701631-49701650 None:intergenic 55.0%
CAAGGTGAAATGCAGGTGGC+AGG + chr1_2:49701760-49701779 None:intergenic 55.0%
CTGCCACCTGCATTTCACCT+TGG - chr1_2:49701758-49701777 Msa0074780:intron 55.0%
GTCAACAGACCAGGTACCAG+TGG - chr1_2:49702668-49702687 Msa0074780:CDS 55.0%
TGGCAGCTGCTATGGTATGC+CGG + chr1_2:49703147-49703166 None:intergenic 55.0%
GCATACCATAGCAGCTGCCA+TGG - chr1_2:49703147-49703166 Msa0074780:five_prime_UTR 55.0%
TACCATAGCAGCTGCCATGG+TGG - chr1_2:49703150-49703169 Msa0074780:five_prime_UTR 55.0%
! GTTGTAGTTGCCGGTGCCGA+CGG + chr1_2:49695505-49695524 None:intergenic 60.0%
CTGGCGGTGGTTGTAGTTGC+CGG + chr1_2:49695514-49695533 None:intergenic 60.0%
!! GGAAGCGCCGGTCAGAAACA+CGG - chr1_2:49695715-49695734 Msa0074780:intron 60.0%
GTTCAGCAAACGAGACCGGC+AGG - chr1_2:49695781-49695800 Msa0074780:intron 60.0%
TCAGCAAACGAGACCGGCAG+GGG - chr1_2:49695783-49695802 Msa0074780:intron 60.0%
TTCCTCGCCGGATGAATCGG+AGG + chr1_2:49695823-49695842 None:intergenic 60.0%
ACCATCTCCGGTTTCCTCGC+CGG + chr1_2:49695835-49695854 None:intergenic 60.0%
AGCGGCAAGAGAATCGACGG+TGG - chr1_2:49695978-49695997 Msa0074780:intron 60.0%
! GGAAACGATCAGGAGCGCGA+CGG - chr1_2:49696059-49696078 Msa0074780:intron 60.0%
TGCGTGTGTGTGAGCACCAC+CGG - chr1_2:49696093-49696112 Msa0074780:intron 60.0%
CGGAAAAGCTGCGACGACGT+TGG - chr1_2:49696113-49696132 Msa0074780:intron 60.0%
CGTCGCCTGGTTGTTCTAGC+GGG - chr1_2:49696151-49696170 Msa0074780:intron 60.0%
GCACTCCCGCTAGAACAACC+AGG + chr1_2:49696159-49696178 None:intergenic 60.0%
CCAGCTACAGTTGCTGCTGC+TGG + chr1_2:49701439-49701458 None:intergenic 60.0%
CCAGCAGCAGCAACTGTAGC+TGG - chr1_2:49701436-49701455 Msa0074780:intron 60.0%
GGTGCAGCTGCAGGAACATG+GGG + chr1_2:49701502-49701521 None:intergenic 60.0%
CAGGTGCAGCTGCAGGAACA+TGG + chr1_2:49701504-49701523 None:intergenic 60.0%
TCTTGGCTCCCACTGGTACC+TGG + chr1_2:49702680-49702699 None:intergenic 60.0%
CACCACCATGGCAGCTGCTA+TGG + chr1_2:49703155-49703174 None:intergenic 60.0%
AGGAATCACGCGACTGGCGG+TGG + chr1_2:49695527-49695546 None:intergenic 65.0%
!! AGCGCCGGTCAGAAACACGG+CGG - chr1_2:49695718-49695737 Msa0074780:intron 65.0%
TCCGGCGAGGAAACCGGAGA+TGG - chr1_2:49695831-49695850 Msa0074780:intron 65.0%
GGCGAGGAAACCGGAGATGG+TGG - chr1_2:49695834-49695853 Msa0074780:intron 65.0%
! AACGATCAGGAGCGCGACGG+CGG - chr1_2:49696062-49696081 Msa0074780:intron 65.0%
! CGTCGTCGCAGCTTTTCCGG+TGG + chr1_2:49696112-49696131 None:intergenic 65.0%
CCCATCCCCATTCCCATCGC+CGG + chr1_2:49701334-49701353 None:intergenic 65.0%
CCGGCGATGGGAATGGGGAT+GGG - chr1_2:49701331-49701350 Msa0074780:intron 65.0%
!! GGTGGGGACCGAGGTATTGC+TGG + chr1_2:49701636-49701655 None:intergenic 65.0%
GCAATACCTCGGTCCCCACC+AGG - chr1_2:49701636-49701655 Msa0074780:intron 65.0%
GCAAACGAGACCGGCAGGGG+TGG - chr1_2:49695786-49695805 Msa0074780:intron 70.0%
AACGAGACCGGCAGGGGTGG+CGG - chr1_2:49695789-49695808 Msa0074780:intron 70.0%
GGCCTCCGATTCATCCGGCG+AGG - chr1_2:49695818-49695837 Msa0074780:intron 70.0%
GCCGGCGATGGGAATGGGGA+TGG - chr1_2:49701330-49701349 Msa0074780:intron 70.0%
CGAGAAGCCGCCACCCCTGC+CGG + chr1_2:49695799-49695818 None:intergenic 75.0%
! CGGCAGGGGTGGCGGCTTCT+CGG - chr1_2:49695797-49695816 Msa0074780:intron 75.0%
! AGGAGCGCGACGGCGGAGAC+TGG - chr1_2:49696069-49696088 Msa0074780:intron 75.0%
GCTGCACCTGGTGGGGACCG+AGG + chr1_2:49701645-49701664 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49694885 49703305 49694885 ID=Msa0074780;Name=Msa0074780
chr1_2 mRNA 49694885 49703305 49694885 ID=Msa0074780-mRNA-1;Parent=Msa0074780;Name=Msa0074780-mRNA-1;_AED=0.21;_eAED=0.21;_QI=267|1|1|1|0.75|0.55|9|176|542
chr1_2 exon 49694885 49695056 49694885 ID=Msa0074780-mRNA-1:exon:15232;Parent=Msa0074780-mRNA-1
chr1_2 exon 49695468 49695540 49695468 ID=Msa0074780-mRNA-1:exon:15231;Parent=Msa0074780-mRNA-1
chr1_2 exon 49696515 49696919 49696515 ID=Msa0074780-mRNA-1:exon:15230;Parent=Msa0074780-mRNA-1
chr1_2 exon 49698656 49698721 49698656 ID=Msa0074780-mRNA-1:exon:15229;Parent=Msa0074780-mRNA-1
chr1_2 exon 49698809 49698874 49698809 ID=Msa0074780-mRNA-1:exon:15228;Parent=Msa0074780-mRNA-1
chr1_2 exon 49698953 49699051 49698953 ID=Msa0074780-mRNA-1:exon:15227;Parent=Msa0074780-mRNA-1
chr1_2 exon 49701933 49702773 49701933 ID=Msa0074780-mRNA-1:exon:15226;Parent=Msa0074780-mRNA-1
chr1_2 exon 49702864 49702971 49702864 ID=Msa0074780-mRNA-1:exon:15225;Parent=Msa0074780-mRNA-1
chr1_2 exon 49703064 49703305 49703064 ID=Msa0074780-mRNA-1:exon:15224;Parent=Msa0074780-mRNA-1
chr1_2 five_prime_UTR 49703064 49703305 49703064 ID=Msa0074780-mRNA-1:five_prime_utr;Parent=Msa0074780-mRNA-1
chr1_2 five_prime_UTR 49702947 49702971 49702947 ID=Msa0074780-mRNA-1:five_prime_utr;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49702864 49702946 49702864 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49701933 49702773 49701933 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49698953 49699051 49698953 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49698809 49698874 49698809 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49698656 49698721 49698656 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49696515 49696919 49696515 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 CDS 49695472 49695540 49695472 ID=Msa0074780-mRNA-1:cds;Parent=Msa0074780-mRNA-1
chr1_2 three_prime_UTR 49695468 49695471 49695468 ID=Msa0074780-mRNA-1:three_prime_utr;Parent=Msa0074780-mRNA-1
chr1_2 three_prime_UTR 49694885 49695056 49694885 ID=Msa0074780-mRNA-1:three_prime_utr;Parent=Msa0074780-mRNA-1
Gene Sequence

>Msa0074780

ATGAATTACCATGTTCCAGATTTCGATATTCAAATGGATGATGAAGAAGAATACCCTATACATCATTCAAAGAAACCTTTCACGCAACAAGACGATGAGATCATGGAACTATTGTGGCAAAACGGACAAGTTGTGATGCAAAGCCAAAACCACCGCCAATTTAGAAAACCGTCGGCACCGGCAACTACAACCACCGCCAGTCGCGTGATTCCTGATCATAGAGAGATTCGATCAACCGATGCAGATAACTACATGAATCAACACTTGTTCATGCAAGAAGATGAAATGGCATCGTGGCTTTTTGATTCAATGAATGAAGTTGAAGATCCTCCTTTCAACCGTCACGATTTCAGTTCAGAAACACTTTTTCATTCATCAGTCGGAAGCGCCGGTCAGAAACACGGCGGTGTTATACAAGCACAAGCCACGGAACGTGAGTCGGAGTTTGTTCAGCAAACGAGACCGGCAGGGGTGGCGGCTTCTCGGCCTCCGATTCATCCGGCGAGGAAACCGGAGATGGTGGTGAATAGAACACAGAAACCGGATATGGTGGTGAATAGAACACAGAATTTCGCGCATTTTACTAATACTAACCAAAGTAATGCGAGAAGTGAACCAGGTGCATCTTCGAGTTCGATGATTGCAGCGGCAAGAGAATCGACGGTGGTAGATTCATGTGATACGCCGGTCATGACAGCAAAAACGTACGCTGCTTCGAGATTATCGGAAACGATCAGGAGCGCGACGGCGGAGACTGGATGCGTGTGTGTGAGCACCACCGGAAAAGCTGCGACGACGTTGGATATGACAGTTACGTCGTCGCCTGGTTGTTCTAGCGGGAGTGCTGAACCGGTTCATAGAGAACCGGAGTTGGACCGGAAAAGGAAGGGACGTGAACCGGAAGAATCTGAGTTTCAGAGCGAGGATGTCGATTTTGAATGTCGGGAAGAAAAAAAACAACACCGTGGATCTACATCTGCAAAGAGATCCCGTGCTGCAGAGGTTCATAATCTCTCAGAGAGGAAGCGTCGAGATAGAATTAACGAAAAGATGAAAGCTTTGCAAGAACTTATACCGCGGTGCAACAAGTCCGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGATACCTATGATGTTTCCTGGAATTCAGCAATTTATGCCGGCGATGGGAATGGGGATGGGAATGGGTTTAGGGATGGAAATGGGAATGGGAATGAACAGACCAGTGATGCCATTTCCTAATATGTTGCCTAATTCTCCTTTGCCAGCAGCAGCAACTGTAGCTGGTCCTTTTGGACCAAGGTTCGCTATGCCTCCTTTCCATATGCCCCATGTTCCTGCAGCTGCACCTGATTCATCCAGAATGCAAGCAGAAAATCAATCAGACAACCCCCTTAACTCCCTTGGTTCTCTGCCTCCAGATCAATCACGCATTCCAAACCCAAACTTCACAGATCCTTACCAGCAATACCTCGGTCCCCACCAGGTGCAGCAATTAATGCAGGCAATGAACCAGCAAAATGTCAACAGACCAGGTACCAGTGGGAGCCAAGATAATCCAGAAAAGCATTAG
Protein sequence

>Msa0074780

MNYHVPDFDIQMDDEEEYPIHHSKKPFTQQDDEIMELLWQNGQVVMQSQNHRQFRKPSAPATTTTASRVIPDHREIRSTDADNYMNQHLFMQEDEMASWLFDSMNEVEDPPFNRHDFSSETLFHSSVGSAGQKHGGVIQAQATERESEFVQQTRPAGVAASRPPIHPARKPEMVVNRTQKPDMVVNRTQNFAHFTNTNQSNARSEPGASSSSMIAAARESTVVDSCDTPVMTAKTYAASRLSETIRSATAETGCVCVSTTGKAATTLDMTVTSSPGCSSGSAEPVHREPELDRKRKGREPEESEFQSEDVDFECREEKKQHRGSTSAKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMIPMMFPGIQQFMPAMGMGMGMGLGMEMGMGMNRPVMPFPNMLPNSPLPAAATVAGPFGPRFAMPPFHMPHVPAAAPDSSRMQAENQSDNPLNSLGSLPPDQSRIPNPNFTDPYQQYLGPHQVQQLMQAMNQQNVNRPGTSGSQDNPEKH*