Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273920 | AFK35117.1 | 88.660 | 97 | 3 | 2 | 14 | 103 | 344 | 439 | 3.88e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273920 | sp|Q0WUY1|NADKC_ARATH | 70.513 | 78 | 16 | 1 | 33 | 103 | 376 | 453 | 1.98e-30 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273920 | I3S4C5 | 88.660 | 97 | 3 | 2 | 14 | 103 | 344 | 439 | 1.85e-50 | 176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa1273920 | 0.803000 | 4.294254e-49 | -8.615850e-47 |
| Msa0014710 | Msa1273920 | 0.833640 | 4.748476e-56 | -8.615850e-47 |
| Msa0017510 | Msa1273920 | 0.812279 | 4.591998e-51 | -8.615850e-47 |
| Msa0028700 | Msa1273920 | 0.807632 | 4.598510e-50 | -8.615850e-47 |
| Msa0073530 | Msa1273920 | 0.814150 | 1.783897e-51 | -8.615850e-47 |
| Msa0100090 | Msa1273920 | 0.805042 | 1.615787e-49 | -8.615850e-47 |
| Msa0105070 | Msa1273920 | 0.804990 | 1.656315e-49 | -8.615850e-47 |
| Msa0115270 | Msa1273920 | 0.826693 | 2.358626e-54 | -8.615850e-47 |
| Msa0116770 | Msa1273920 | 0.830418 | 2.970008e-55 | -8.615850e-47 |
| Msa0604510 | Msa1273920 | 0.805662 | 1.198169e-49 | -8.615850e-47 |
| Msa0610430 | Msa1273920 | 0.821314 | 4.311663e-53 | -8.615850e-47 |
| Msa0620960 | Msa1273920 | 0.801810 | 7.553998e-49 | -8.615850e-47 |
| Msa0623080 | Msa1273920 | 0.802275 | 6.059580e-49 | -8.615850e-47 |
| Msa0626090 | Msa1273920 | 0.803671 | 3.119122e-49 | -8.615850e-47 |
| Msa0633840 | Msa1273920 | 0.811113 | 8.236197e-51 | -8.615850e-47 |
| Msa0641670 | Msa1273920 | 0.815883 | 7.359268e-52 | -8.615850e-47 |
| Msa0654010 | Msa1273920 | 0.812001 | 5.280417e-51 | -8.615850e-47 |
| Msa0657970 | Msa1273920 | 0.812333 | 4.468503e-51 | -8.615850e-47 |
| Msa0661190 | Msa1273920 | -0.810476 | 1.131092e-50 | -8.615850e-47 |
| Msa0661650 | Msa1273920 | 0.800893 | 1.163755e-48 | -8.615850e-47 |
| Msa0662650 | Msa1273920 | 0.808199 | 3.483081e-50 | -8.615850e-47 |
| Msa0663240 | Msa1273920 | 0.821999 | 2.994472e-53 | -8.615850e-47 |
| Msa0663380 | Msa1273920 | 0.814720 | 1.334322e-51 | -8.615850e-47 |
| Msa0672690 | Msa1273920 | 0.808051 | 3.745262e-50 | -8.615850e-47 |
| Msa0673460 | Msa1273920 | 0.801041 | 1.085427e-48 | -8.615850e-47 |
| Msa0688480 | Msa1273920 | 0.828088 | 1.091675e-54 | -8.615850e-47 |
| Msa0693380 | Msa1273920 | 0.815457 | 9.155497e-52 | -8.615850e-47 |
| Msa0701010 | Msa1273920 | 0.817027 | 4.078898e-52 | -8.615850e-47 |
| Msa0708860 | Msa1273920 | 0.809986 | 1.442418e-50 | -8.615850e-47 |
| Msa0716840 | Msa1273920 | 0.826118 | 3.233057e-54 | -8.615850e-47 |
| Msa0731550 | Msa1273920 | 0.814210 | 1.730019e-51 | -8.615850e-47 |
| Msa0731940 | Msa1273920 | 0.804673 | 1.929245e-49 | -8.615850e-47 |
| Msa0735170 | Msa1273920 | 0.805228 | 1.477562e-49 | -8.615850e-47 |
| Msa0743720 | Msa1273920 | 0.815913 | 7.243865e-52 | -8.615850e-47 |
| Msa0743950 | Msa1273920 | 0.807783 | 4.270970e-50 | -8.615850e-47 |
| Msa0745790 | Msa1273920 | 0.805124 | 1.553516e-49 | -8.615850e-47 |
| Msa0759410 | Msa1273920 | 0.800727 | 1.258174e-48 | -8.615850e-47 |
| Msa0766630 | Msa1273920 | 0.833030 | 6.738318e-56 | -8.615850e-47 |
| Msa0768370 | Msa1273920 | 0.811973 | 5.354891e-51 | -8.615850e-47 |
| Msa0773840 | Msa1273920 | 0.803027 | 4.240579e-49 | -8.615850e-47 |
| Msa0777230 | Msa1273920 | 0.807305 | 5.392590e-50 | -8.615850e-47 |
| Msa0797170 | Msa1273920 | 0.802789 | 4.748352e-49 | -8.615850e-47 |
| Msa0804230 | Msa1273920 | 0.809131 | 2.201801e-50 | -8.615850e-47 |
| Msa0820850 | Msa1273920 | 0.830837 | 2.344575e-55 | -8.615850e-47 |
| Msa0824680 | Msa1273920 | 0.803499 | 3.386322e-49 | -8.615850e-47 |
| Msa0135380 | Msa1273920 | 0.821183 | 4.622425e-53 | -8.615850e-47 |
| Msa0140390 | Msa1273920 | 0.815401 | 9.422493e-52 | -8.615850e-47 |
| Msa0157290 | Msa1273920 | 0.811546 | 6.632959e-51 | -8.615850e-47 |
| Msa0165210 | Msa1273920 | 0.828116 | 1.074876e-54 | -8.615850e-47 |
| Msa0165220 | Msa1273920 | 0.821528 | 3.848944e-53 | -8.615850e-47 |
| Msa0175740 | Msa1273920 | 0.827076 | 1.909757e-54 | -8.615850e-47 |
| Msa0178930 | Msa1273920 | 0.802096 | 6.596099e-49 | -8.615850e-47 |
| Msa0215320 | Msa1273920 | -0.806058 | 9.891057e-50 | -8.615850e-47 |
| Msa0216290 | Msa1273920 | 0.811797 | 5.850322e-51 | -8.615850e-47 |
| Msa0220740 | Msa1273920 | 0.808067 | 3.714878e-50 | -8.615850e-47 |
| Msa0222890 | Msa1273920 | 0.803872 | 2.833536e-49 | -8.615850e-47 |
| Msa0223010 | Msa1273920 | 0.816474 | 5.428015e-52 | -8.615850e-47 |
| Msa0223260 | Msa1273920 | 0.812271 | 4.611258e-51 | -8.615850e-47 |
| Msa0223410 | Msa1273920 | -0.815863 | 7.433056e-52 | -8.615850e-47 |
| Msa0226890 | Msa1273920 | 0.812948 | 3.278355e-51 | -8.615850e-47 |
| Msa0233300 | Msa1273920 | 0.833167 | 6.231871e-56 | -8.615850e-47 |
| Msa1226660 | Msa1273920 | 0.805074 | 1.590798e-49 | -8.615850e-47 |
| Msa1229600 | Msa1273920 | 0.800311 | 1.529432e-48 | -8.615850e-47 |
| Msa1233500 | Msa1273920 | 0.825438 | 4.688081e-54 | -8.615850e-47 |
| Msa1233890 | Msa1273920 | 0.846587 | 1.977543e-59 | -8.615850e-47 |
| Msa1244250 | Msa1273920 | 0.819870 | 9.255697e-53 | -8.615850e-47 |
| Msa1249490 | Msa1273920 | 0.832442 | 9.430873e-56 | -8.615850e-47 |
| Msa1259590 | Msa1273920 | -0.806268 | 8.933411e-50 | -8.615850e-47 |
| Msa1271210 | Msa1273920 | 0.811615 | 6.407671e-51 | -8.615850e-47 |
| Msa1273920 | Msa1275360 | 0.801432 | 9.028165e-49 | -8.615850e-47 |
| Msa1273920 | Msa1277660 | 0.830135 | 3.483399e-55 | -8.615850e-47 |
| Msa1273920 | Msa1284680 | 0.859172 | 4.970363e-63 | -8.615850e-47 |
| Msa1273920 | Msa1299290 | -0.809703 | 1.659524e-50 | -8.615850e-47 |
| Msa1273920 | Msa1306760 | 0.813685 | 2.258626e-51 | -8.615850e-47 |
| Msa1273920 | Msa1308620 | 0.803373 | 3.596183e-49 | -8.615850e-47 |
| Msa1273920 | Msa1310210 | 0.801633 | 8.212121e-49 | -8.615850e-47 |
| Msa1273920 | Msa1348950 | 0.848868 | 4.658842e-60 | -8.615850e-47 |
| Msa1273920 | Msa1359040 | 0.804732 | 1.876095e-49 | -8.615850e-47 |
| Msa1273920 | Msa1362880 | 0.839301 | 1.719681e-57 | -8.615850e-47 |
| Msa1273920 | Msa1369530 | 0.813615 | 2.339741e-51 | -8.615850e-47 |
| Msa1273920 | Msa1373030 | 0.807007 | 6.236813e-50 | -8.615850e-47 |
| Msa1273920 | Msa1403480 | 0.815876 | 7.383748e-52 | -8.615850e-47 |
| Msa1273920 | Msa1411020 | 0.817503 | 3.188698e-52 | -8.615850e-47 |
| Msa1273920 | Msa1419960 | 0.822809 | 1.941713e-53 | -8.615850e-47 |
| Msa1273920 | Msa1420490 | 0.807928 | 3.977461e-50 | -8.615850e-47 |
| Msa1273920 | Msa1423390 | 0.808553 | 2.927311e-50 | -8.615850e-47 |
| Msa1273920 | Msa1424290 | 0.812961 | 3.256987e-51 | -8.615850e-47 |
| Msa1273920 | Msa1427230 | 0.829841 | 4.106674e-55 | -8.615850e-47 |
| Msa1273920 | Msa1434350 | 0.813802 | 2.128323e-51 | -8.615850e-47 |
| Msa1273920 | Msa1439320 | 0.815303 | 9.908419e-52 | -8.615850e-47 |
| Msa1273920 | Msa1440370 | 0.809572 | 1.771199e-50 | -8.615850e-47 |
| Msa1273920 | Msa1440810 | 0.812780 | 3.569083e-51 | -8.615850e-47 |
| Msa1273920 | Msa1443060 | 0.801111 | 1.050285e-48 | -8.615850e-47 |
| Msa1273920 | Msa1450760 | 0.803225 | 3.858721e-49 | -8.615850e-47 |
| Msa1273920 | Msa1451620 | -0.821239 | 4.488265e-53 | -8.615850e-47 |
| Msa1273920 | Msa1455490 | 0.833336 | 5.653428e-56 | -8.615850e-47 |
| Msa1273920 | Msa1460830 | 0.824662 | 7.149791e-54 | -8.615850e-47 |
| Msa1273920 | Msa1466540 | 0.820978 | 5.154383e-53 | -8.615850e-47 |
| Msa0371730 | Msa1273920 | 0.800238 | 1.583143e-48 | -8.615850e-47 |
| Msa0397750 | Msa1273920 | 0.809400 | 1.928089e-50 | -8.615850e-47 |
| Msa0398380 | Msa1273920 | 0.824604 | 7.378342e-54 | -8.615850e-47 |
| Msa0401310 | Msa1273920 | 0.854669 | 1.055558e-61 | -8.615850e-47 |
| Msa0402290 | Msa1273920 | 0.806659 | 7.386894e-50 | -8.615850e-47 |
| Msa0404030 | Msa1273920 | 0.807597 | 4.676475e-50 | -8.615850e-47 |
| Msa0405370 | Msa1273920 | 0.817014 | 4.106547e-52 | -8.615850e-47 |
| Msa0406880 | Msa1273920 | 0.816543 | 5.237572e-52 | -8.615850e-47 |
| Msa0408110 | Msa1273920 | 0.886056 | 4.764158e-72 | -8.615850e-47 |
| Msa0414230 | Msa1273920 | 0.801416 | 9.095898e-49 | -8.615850e-47 |
| Msa0424320 | Msa1273920 | 0.814149 | 1.784225e-51 | -8.615850e-47 |
| Msa0442850 | Msa1273920 | 0.806477 | 8.070506e-50 | -8.615850e-47 |
| Msa0473240 | Msa1273920 | 0.808991 | 2.359606e-50 | -8.615850e-47 |
| Msa0980090 | Msa1273920 | 0.806571 | 7.710589e-50 | -8.615850e-47 |
| Msa0983090 | Msa1273920 | 0.916472 | 1.708987e-85 | -8.615850e-47 |
| Msa0991080 | Msa1273920 | 0.891226 | 4.819608e-74 | -8.615850e-47 |
| Msa0996170 | Msa1273920 | 0.803617 | 3.200141e-49 | -8.615850e-47 |
| Msa1000860 | Msa1273920 | 0.813429 | 2.571456e-51 | -8.615850e-47 |
| Msa1000890 | Msa1273920 | 0.829212 | 5.842352e-55 | -8.615850e-47 |
| Msa1000900 | Msa1273920 | 0.830535 | 2.780277e-55 | -8.615850e-47 |
| Msa1003620 | Msa1273920 | 0.814418 | 1.556555e-51 | -8.615850e-47 |
| Msa1012830 | Msa1273920 | 0.811510 | 6.754742e-51 | -8.615850e-47 |
| Msa1014540 | Msa1273920 | 0.847412 | 1.175668e-59 | -8.615850e-47 |
| Msa1027290 | Msa1273920 | 0.800167 | 1.636519e-48 | -8.615850e-47 |
| Msa1030970 | Msa1273920 | 0.807775 | 4.287729e-50 | -8.615850e-47 |
| Msa1046300 | Msa1273920 | 0.809843 | 1.548325e-50 | -8.615850e-47 |
| Msa1046460 | Msa1273920 | 0.804510 | 2.086558e-49 | -8.615850e-47 |
| Msa1075220 | Msa1273920 | -0.825299 | 5.054995e-54 | -8.615850e-47 |
| Msa1075650 | Msa1273920 | 0.811645 | 6.312207e-51 | -8.615850e-47 |
| Msa1077950 | Msa1273920 | 0.805913 | 1.060784e-49 | -8.615850e-47 |
| Msa1082500 | Msa1273920 | 0.829704 | 4.435442e-55 | -8.615850e-47 |
| Msa1090260 | Msa1273920 | 0.803692 | 3.087395e-49 | -8.615850e-47 |
| Msa0258760 | Msa1273920 | 0.801258 | 9.803106e-49 | -8.615850e-47 |
| Msa0269450 | Msa1273920 | 0.805389 | 1.366921e-49 | -8.615850e-47 |
| Msa0278110 | Msa1273920 | 0.818691 | 1.717593e-52 | -8.615850e-47 |
| Msa0279790 | Msa1273920 | 0.806082 | 9.774725e-50 | -8.615850e-47 |
| Msa0288100 | Msa1273920 | 0.822571 | 2.206186e-53 | -8.615850e-47 |
| Msa0302580 | Msa1273920 | -0.817701 | 2.877562e-52 | -8.615850e-47 |
| Msa0305190 | Msa1273920 | 0.816878 | 4.405744e-52 | -8.615850e-47 |
| Msa0306210 | Msa1273920 | -0.803603 | 3.222423e-49 | -8.615850e-47 |
| Msa0319170 | Msa1273920 | 0.802660 | 5.050089e-49 | -8.615850e-47 |
| Msa0321860 | Msa1273920 | 0.802762 | 4.810741e-49 | -8.615850e-47 |
| Msa0323080 | Msa1273920 | 0.803512 | 3.365719e-49 | -8.615850e-47 |
| Msa0326520 | Msa1273920 | 0.812781 | 3.567743e-51 | -8.615850e-47 |
| Msa0339620 | Msa1273920 | 0.818119 | 2.314778e-52 | -8.615850e-47 |
| Msa0340450 | Msa1273920 | 0.817740 | 2.818821e-52 | -8.615850e-47 |
| Msa0344830 | Msa1273920 | 0.820082 | 8.275637e-53 | -8.615850e-47 |
| Msa0350990 | Msa1273920 | 0.841651 | 4.176596e-58 | -8.615850e-47 |
| Msa0351030 | Msa1273920 | 0.844473 | 7.399793e-59 | -8.615850e-47 |
| Msa0351100 | Msa1273920 | 0.821021 | 5.038043e-53 | -8.615850e-47 |
| Msa0355220 | Msa1273920 | 0.802698 | 4.958061e-49 | -8.615850e-47 |
| Msa1107800 | Msa1273920 | 0.809844 | 1.547907e-50 | -8.615850e-47 |
| Msa1116130 | Msa1273920 | -0.806528 | 7.872108e-50 | -8.615850e-47 |
| Msa1119480 | Msa1273920 | 0.800454 | 1.430552e-48 | -8.615850e-47 |
| Msa1121490 | Msa1273920 | 0.801789 | 7.630326e-49 | -8.615850e-47 |
| Msa1139000 | Msa1273920 | -0.803115 | 4.066254e-49 | -8.615850e-47 |
| Msa1139680 | Msa1273920 | 0.806009 | 1.013035e-49 | -8.615850e-47 |
| Msa1156020 | Msa1273920 | 0.840727 | 7.306370e-58 | -8.615850e-47 |
| Msa1162550 | Msa1273920 | -0.825332 | 4.967492e-54 | -8.615850e-47 |
| Msa1172400 | Msa1273920 | 0.812943 | 3.286263e-51 | -8.615850e-47 |
| Msa1174040 | Msa1273920 | 0.819757 | 9.819002e-53 | -8.615850e-47 |
| Msa1211140 | Msa1273920 | -0.809715 | 1.650027e-50 | -8.615850e-47 |
| Msa0484780 | Msa1273920 | 0.828743 | 7.586997e-55 | -8.615850e-47 |
| Msa0519000 | Msa1273920 | 0.801902 | 7.233273e-49 | -8.615850e-47 |
| Msa0523940 | Msa1273920 | 0.820359 | 7.152039e-53 | -8.615850e-47 |
| Msa0532350 | Msa1273920 | 0.800141 | 1.656715e-48 | -8.615850e-47 |
| Msa0545700 | Msa1273920 | 0.817937 | 2.544596e-52 | -8.615850e-47 |
| Msa0553460 | Msa1273920 | 0.802083 | 6.636566e-49 | -8.615850e-47 |
| Msa0558690 | Msa1273920 | 0.822556 | 2.224349e-53 | -8.615850e-47 |
| Msa0562440 | Msa1273920 | 0.857313 | 1.777100e-62 | -8.615850e-47 |
| Msa0585230 | Msa1273920 | 0.807998 | 3.844190e-50 | -8.615850e-47 |
| Msa0593650 | Msa1273920 | 0.801914 | 7.190004e-49 | -8.615850e-47 |
| Msa0842650 | Msa1273920 | 0.804543 | 2.053636e-49 | -8.615850e-47 |
| Msa0843260 | Msa1273920 | 0.801763 | 7.721399e-49 | -8.615850e-47 |
| Msa0849030 | Msa1273920 | 0.813545 | 2.424442e-51 | -8.615850e-47 |
| Msa0860410 | Msa1273920 | 0.815788 | 7.723709e-52 | -8.615850e-47 |
| Msa0861130 | Msa1273920 | 0.832003 | 1.210848e-55 | -8.615850e-47 |
| Msa0864250 | Msa1273920 | 0.804867 | 1.757889e-49 | -8.615850e-47 |
| Msa0876580 | Msa1273920 | 0.843157 | 1.665422e-58 | -8.615850e-47 |
| Msa0877250 | Msa1273920 | 0.823202 | 1.572502e-53 | -8.615850e-47 |
| Msa0880140 | Msa1273920 | 0.810928 | 9.033136e-51 | -8.615850e-47 |
| Msa0897880 | Msa1273920 | 0.811161 | 8.040665e-51 | -8.615850e-47 |
| Msa0907070 | Msa1273920 | 0.816087 | 6.624277e-52 | -8.615850e-47 |
| Msa0918700 | Msa1273920 | 0.903488 | 3.294546e-79 | -8.615850e-47 |
| Msa0925290 | Msa1273920 | 0.801190 | 1.011871e-48 | -8.615850e-47 |
| Msa0927380 | Msa1273920 | 0.817170 | 3.787955e-52 | -8.615850e-47 |
| Msa0931520 | Msa1273920 | 0.805816 | 1.111748e-49 | -8.615850e-47 |
| Msa0933100 | Msa1273920 | 0.800189 | 1.619597e-48 | -8.615850e-47 |
| Msa0936300 | Msa1273920 | 0.812043 | 5.169722e-51 | -8.615850e-47 |
| Msa0942200 | Msa1273920 | 0.800601 | 1.335361e-48 | -8.615850e-47 |
| Msa0953120 | Msa1273920 | 0.803999 | 2.666136e-49 | -8.615850e-47 |
| Msa0954910 | Msa1273920 | 0.810175 | 1.313351e-50 | -8.615850e-47 |
| Msa0969520 | Msa1273920 | 0.822348 | 2.485326e-53 | -8.615850e-47 |
| Msa0973100 | Msa1273920 | 0.815187 | 1.051258e-51 | -8.615850e-47 |
| Msa0975220 | Msa1273920 | 0.813998 | 1.926844e-51 | -8.615850e-47 |
| Msa0976670 | Msa1273920 | 0.810525 | 1.103859e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273920 | MtrunA17_Chr1g0187021 | 88.660 | 97 | 3 | 2 | 14 | 103 | 344 | 439 | 6.48e-54 | 176 |
| Msa1273920 | MtrunA17_Chr1g0187071 | 71.134 | 97 | 20 | 2 | 14 | 103 | 343 | 438 | 1.38e-38 | 135 |
| Msa1273920 | MtrunA17_Chr1g0187051 | 68.041 | 97 | 13 | 2 | 14 | 103 | 339 | 424 | 2.37e-37 | 132 |
| Msa1273920 | MtrunA17_Chr7g0260781 | 69.444 | 72 | 15 | 1 | 39 | 103 | 223 | 294 | 6.21e-28 | 105 |
| Msa1273920 | MtrunA17_Chr1g0184551 | 61.628 | 86 | 24 | 2 | 25 | 103 | 347 | 430 | 2.58e-27 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273920 | AT1G04280.2 | 70.513 | 78 | 16 | 1 | 33 | 103 | 322 | 399 | 1.16e-31 | 117 |
| Msa1273920 | AT1G04280.1 | 70.513 | 78 | 16 | 1 | 33 | 103 | 376 | 453 | 2.01e-31 | 116 |
| Msa1273920 | AT1G06750.2 | 55.556 | 117 | 35 | 5 | 14 | 123 | 349 | 455 | 1.08e-29 | 112 |
| Msa1273920 | AT1G06750.3 | 55.556 | 117 | 35 | 5 | 14 | 123 | 342 | 448 | 1.22e-29 | 111 |
| Msa1273920 | AT1G06750.1 | 55.556 | 117 | 35 | 5 | 14 | 123 | 342 | 448 | 1.22e-29 | 111 |
| Msa1273920 | AT2G30630.1 | 59.794 | 97 | 25 | 3 | 14 | 103 | 356 | 445 | 7.92e-29 | 109 |
| Msa1273920 | AT2G30630.2 | 59.794 | 97 | 25 | 3 | 14 | 103 | 377 | 466 | 9.07e-29 | 109 |
Find 22 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGTTTGCAATATTT+TGG | 0.119289 | 8_3:+7665355 | None:intergenic |
| CTTGTAGCTCTGCTTCTGTT+AGG | 0.288048 | 8_3:+7664652 | None:intergenic |
| GGATATCTTGCAGTTATTAG+AGG | 0.406489 | 8_3:-7665560 | Msa1273920:CDS |
| TTGCAGTTATTAGAGGCATT+AGG | 0.422529 | 8_3:-7665553 | Msa1273920:intron |
| TTGTAGCTCTGCTTCTGTTA+GGG | 0.423721 | 8_3:+7664653 | None:intergenic |
| CAACAAGAGGAAAATTCTAC+AGG | 0.441415 | 8_3:-7665638 | Msa1273920:CDS |
| GCAAACTTGTTGACAGTGCT+AGG | 0.509508 | 8_3:-7665345 | Msa1273920:CDS |
| CTAGTTGGTGTGGTTTGTGA+TGG | 0.513280 | 8_3:-7665581 | Msa1273920:CDS |
| CTATACAAAGCAAGTGAATG+AGG | 0.513355 | 8_3:-7665675 | Msa1273920:CDS |
| CCAACTAGCTCAATTCTGTA+AGG | 0.525410 | 8_3:+7665596 | None:intergenic |
| CCTTACAGAATTGAGCTAGT+TGG | 0.526663 | 8_3:-7665596 | Msa1273920:CDS |
| CAGAATTGAGCTAGTTGGTG+TGG | 0.527716 | 8_3:-7665591 | Msa1273920:CDS |
| CTCTATTGCACAGATGCTGT+TGG | 0.532305 | 8_3:-7665322 | Msa1273920:CDS |
| TATTGCACAGATGCTGTTGG+TGG | 0.536088 | 8_3:-7665319 | Msa1273920:CDS |
| TGCTGTTGGTGGTCCACCAA+AGG | 0.575982 | 8_3:-7665308 | Msa1273920:intron |
| TATGACATGAAGGGCAGTGA+GGG | 0.577678 | 8_3:-7665422 | Msa1273920:intron |
| AGAAGAAGAACATCAACAAG+AGG | 0.597156 | 8_3:-7665651 | Msa1273920:CDS |
| AACAAGAGGAAAATTCTACA+GGG | 0.606029 | 8_3:-7665637 | Msa1273920:CDS |
| TATACAAAGCAAGTGAATGA+GGG | 0.610525 | 8_3:-7665674 | Msa1273920:CDS |
| AGTACTGCTTCAAGAAGTCG+AGG | 0.646449 | 8_3:-7664631 | Msa1273920:CDS |
| TTATGACATGAAGGGCAGTG+AGG | 0.692934 | 8_3:-7665423 | Msa1273920:intron |
| ACAAGAGGAAAATTCTACAG+GGG | 0.709176 | 8_3:-7665636 | Msa1273920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAGTATATTAATATAGTA+GGG | + | chr8_3:7664820-7664839 | None:intergenic | 15.0% |
| !!! | TATAATTAACATTTTCCTTT+TGG | - | chr8_3:7664865-7664884 | Msa1273920:intron | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+GGG | - | chr8_3:7665302-7665321 | Msa1273920:intron | 15.0% |
| !!! | TTTTCATTATTGATTTATTG+GGG | - | chr8_3:7665303-7665322 | Msa1273920:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | + | chr8_3:7665377-7665396 | None:intergenic | 15.0% |
| !! | CAAAGTATATTAATATAGTA+GGG | + | chr8_3:7664820-7664839 | None:intergenic | 15.0% |
| !!! | TATAATTAACATTTTCCTTT+TGG | - | chr8_3:7664865-7664884 | Msa1273920:intron | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+GGG | - | chr8_3:7665302-7665321 | Msa1273920:intron | 15.0% |
| !!! | TTTTCATTATTGATTTATTG+GGG | - | chr8_3:7665303-7665322 | Msa1273920:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | + | chr8_3:7665377-7665396 | None:intergenic | 15.0% |
| !! | CCAAAGTATATTAATATAGT+AGG | + | chr8_3:7664821-7664840 | None:intergenic | 20.0% |
| !! | CCTACTATATTAATATACTT+TGG | - | chr8_3:7664818-7664837 | Msa1273920:intron | 20.0% |
| !! | ACTATATTAATATACTTTGG+TGG | - | chr8_3:7664821-7664840 | Msa1273920:intron | 20.0% |
| !!! | TTGTACTTTTTTATTTCACA+TGG | - | chr8_3:7665199-7665218 | Msa1273920:intron | 20.0% |
| !! | CCAATAAATCAATAATGAAA+AGG | + | chr8_3:7665304-7665323 | None:intergenic | 20.0% |
| !!! | CCTTTTCATTATTGATTTAT+TGG | - | chr8_3:7665301-7665320 | Msa1273920:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | + | chr8_3:7665373-7665392 | None:intergenic | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | + | chr8_3:7665633-7665652 | None:intergenic | 20.0% |
| !! | CCAAAGTATATTAATATAGT+AGG | + | chr8_3:7664821-7664840 | None:intergenic | 20.0% |
| !! | CCTACTATATTAATATACTT+TGG | - | chr8_3:7664818-7664837 | Msa1273920:intron | 20.0% |
| !! | ACTATATTAATATACTTTGG+TGG | - | chr8_3:7664821-7664840 | Msa1273920:intron | 20.0% |
| !!! | TTGTACTTTTTTATTTCACA+TGG | - | chr8_3:7665199-7665218 | Msa1273920:intron | 20.0% |
| !! | CCAATAAATCAATAATGAAA+AGG | + | chr8_3:7665304-7665323 | None:intergenic | 20.0% |
| !!! | CCTTTTCATTATTGATTTAT+TGG | - | chr8_3:7665301-7665320 | Msa1273920:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | + | chr8_3:7665373-7665392 | None:intergenic | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | + | chr8_3:7665633-7665652 | None:intergenic | 20.0% |
| !!! | ATACATGCATTTTTTGTGAA+AGG | - | chr8_3:7664629-7664648 | Msa1273920:CDS | 25.0% |
| !!! | TTTCCTTTTGGAATTTTAAC+AGG | - | chr8_3:7664877-7664896 | Msa1273920:intron | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | + | chr8_3:7664978-7664997 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | + | chr8_3:7665169-7665188 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | - | chr8_3:7665536-7665555 | Msa1273920:intron | 25.0% |
| ! | ATGACTGAAGTTATAAACTT+GGG | - | chr8_3:7665564-7665583 | Msa1273920:CDS | 25.0% |
| !!! | ATACATGCATTTTTTGTGAA+AGG | - | chr8_3:7664629-7664648 | Msa1273920:CDS | 25.0% |
| !!! | TTTCCTTTTGGAATTTTAAC+AGG | - | chr8_3:7664877-7664896 | Msa1273920:intron | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | + | chr8_3:7664978-7664997 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | + | chr8_3:7665169-7665188 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | - | chr8_3:7665536-7665555 | Msa1273920:intron | 25.0% |
| ! | ATGACTGAAGTTATAAACTT+GGG | - | chr8_3:7665564-7665583 | Msa1273920:CDS | 25.0% |
| TATACAAAGCAAGTGAATGA+GGG | - | chr8_3:7664656-7664675 | Msa1273920:CDS | 30.0% | |
| AACAAGAGGAAAATTCTACA+GGG | - | chr8_3:7664693-7664712 | Msa1273920:intron | 30.0% | |
| !!! | GGTGTGATTTTTTGTTATGA+TGG | - | chr8_3:7664842-7664861 | Msa1273920:intron | 30.0% |
| TCTCCTGTTAAAATTCCAAA+AGG | + | chr8_3:7664883-7664902 | None:intergenic | 30.0% | |
| GAGAACTATTATGACATGAA+GGG | - | chr8_3:7664899-7664918 | Msa1273920:intron | 30.0% | |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | - | chr8_3:7665128-7665147 | Msa1273920:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | + | chr8_3:7665237-7665256 | None:intergenic | 30.0% | |
| CTTATTAGCTCAGATATCAA+AGG | + | chr8_3:7665402-7665421 | None:intergenic | 30.0% | |
| GATGACTGAAGTTATAAACT+TGG | - | chr8_3:7665563-7665582 | Msa1273920:CDS | 30.0% | |
| TATACAAAGCAAGTGAATGA+GGG | - | chr8_3:7664656-7664675 | Msa1273920:CDS | 30.0% | |
| AACAAGAGGAAAATTCTACA+GGG | - | chr8_3:7664693-7664712 | Msa1273920:intron | 30.0% | |
| !!! | GGTGTGATTTTTTGTTATGA+TGG | - | chr8_3:7664842-7664861 | Msa1273920:intron | 30.0% |
| TCTCCTGTTAAAATTCCAAA+AGG | + | chr8_3:7664883-7664902 | None:intergenic | 30.0% | |
| GAGAACTATTATGACATGAA+GGG | - | chr8_3:7664899-7664918 | Msa1273920:intron | 30.0% | |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | - | chr8_3:7665128-7665147 | Msa1273920:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | + | chr8_3:7665237-7665256 | None:intergenic | 30.0% | |
| CTTATTAGCTCAGATATCAA+AGG | + | chr8_3:7665402-7665421 | None:intergenic | 30.0% | |
| GATGACTGAAGTTATAAACT+TGG | - | chr8_3:7665563-7665582 | Msa1273920:CDS | 30.0% | |
| CTATACAAAGCAAGTGAATG+AGG | - | chr8_3:7664655-7664674 | Msa1273920:CDS | 35.0% | |
| AGAAGAAGAACATCAACAAG+AGG | - | chr8_3:7664679-7664698 | Msa1273920:intron | 35.0% | |
| CAACAAGAGGAAAATTCTAC+AGG | - | chr8_3:7664692-7664711 | Msa1273920:intron | 35.0% | |
| ACAAGAGGAAAATTCTACAG+GGG | - | chr8_3:7664694-7664713 | Msa1273920:intron | 35.0% | |
| GGATATCTTGCAGTTATTAG+AGG | - | chr8_3:7664770-7664789 | Msa1273920:intron | 35.0% | |
| !! | TTGCAGTTATTAGAGGCATT+AGG | - | chr8_3:7664777-7664796 | Msa1273920:intron | 35.0% |
| GGAGAACTATTATGACATGA+AGG | - | chr8_3:7664898-7664917 | Msa1273920:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | + | chr8_3:7665138-7665157 | None:intergenic | 35.0% |
| GGGAAATTATTCTTTGTGCT+AGG | - | chr8_3:7665323-7665342 | Msa1273920:CDS | 35.0% | |
| GAATGTTTAACAGTCTCTCA+GGG | + | chr8_3:7665494-7665513 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | + | chr8_3:7665495-7665514 | None:intergenic | 35.0% | |
| ACTTCAGTCATCTATACCTT+CGG | + | chr8_3:7665555-7665574 | None:intergenic | 35.0% | |
| CTATACAAAGCAAGTGAATG+AGG | - | chr8_3:7664655-7664674 | Msa1273920:CDS | 35.0% | |
| AGAAGAAGAACATCAACAAG+AGG | - | chr8_3:7664679-7664698 | Msa1273920:intron | 35.0% | |
| CAACAAGAGGAAAATTCTAC+AGG | - | chr8_3:7664692-7664711 | Msa1273920:intron | 35.0% | |
| ACAAGAGGAAAATTCTACAG+GGG | - | chr8_3:7664694-7664713 | Msa1273920:intron | 35.0% | |
| GGATATCTTGCAGTTATTAG+AGG | - | chr8_3:7664770-7664789 | Msa1273920:intron | 35.0% | |
| !! | TTGCAGTTATTAGAGGCATT+AGG | - | chr8_3:7664777-7664796 | Msa1273920:intron | 35.0% |
| GGAGAACTATTATGACATGA+AGG | - | chr8_3:7664898-7664917 | Msa1273920:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | + | chr8_3:7665138-7665157 | None:intergenic | 35.0% |
| GGGAAATTATTCTTTGTGCT+AGG | - | chr8_3:7665323-7665342 | Msa1273920:CDS | 35.0% | |
| GAATGTTTAACAGTCTCTCA+GGG | + | chr8_3:7665494-7665513 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | + | chr8_3:7665495-7665514 | None:intergenic | 35.0% | |
| ACTTCAGTCATCTATACCTT+CGG | + | chr8_3:7665555-7665574 | None:intergenic | 35.0% | |
| CCAACTAGCTCAATTCTGTA+AGG | + | chr8_3:7664737-7664756 | None:intergenic | 40.0% | |
| CCTTACAGAATTGAGCTAGT+TGG | - | chr8_3:7664734-7664753 | Msa1273920:intron | 40.0% | |
| !!! | GTTGCTCCTGTTTTTACCTT+TGG | + | chr8_3:7665041-7665060 | None:intergenic | 40.0% |
| !! | CGTTTTGGCCAAAGATAATC+AGG | - | chr8_3:7665143-7665162 | Msa1273920:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | + | chr8_3:7665154-7665173 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | - | chr8_3:7665647-7665666 | Msa1273920:CDS | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | + | chr8_3:7665680-7665699 | None:intergenic | 40.0% |
| CCAACTAGCTCAATTCTGTA+AGG | + | chr8_3:7664737-7664756 | None:intergenic | 40.0% | |
| CCTTACAGAATTGAGCTAGT+TGG | - | chr8_3:7664734-7664753 | Msa1273920:intron | 40.0% | |
| !!! | GTTGCTCCTGTTTTTACCTT+TGG | + | chr8_3:7665041-7665060 | None:intergenic | 40.0% |
| !! | CGTTTTGGCCAAAGATAATC+AGG | - | chr8_3:7665143-7665162 | Msa1273920:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | + | chr8_3:7665154-7665173 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | - | chr8_3:7665647-7665666 | Msa1273920:CDS | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | + | chr8_3:7665680-7665699 | None:intergenic | 40.0% |
| ! | CAGAATTGAGCTAGTTGGTG+TGG | - | chr8_3:7664739-7664758 | Msa1273920:intron | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | - | chr8_3:7664749-7664768 | Msa1273920:intron | 45.0% |
| TTATGACATGAAGGGCAGTG+AGG | - | chr8_3:7664907-7664926 | Msa1273920:intron | 45.0% | |
| TATGACATGAAGGGCAGTGA+GGG | - | chr8_3:7664908-7664927 | Msa1273920:intron | 45.0% | |
| !! | GCAAACTTGTTGACAGTGCT+AGG | - | chr8_3:7664985-7665004 | Msa1273920:intron | 45.0% |
| CTCTATTGCACAGATGCTGT+TGG | - | chr8_3:7665008-7665027 | Msa1273920:intron | 45.0% | |
| TATTGCACAGATGCTGTTGG+TGG | - | chr8_3:7665011-7665030 | Msa1273920:intron | 45.0% | |
| GGTCCACCAAAGGTAAAAAC+AGG | - | chr8_3:7665032-7665051 | Msa1273920:intron | 45.0% | |
| !!! | GCTCCTGTTTTTACCTTTGG+TGG | + | chr8_3:7665038-7665057 | None:intergenic | 45.0% |
| !! | AGTCTCTCAGGGTTGATACA+TGG | + | chr8_3:7665483-7665502 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | - | chr8_3:7665575-7665594 | Msa1273920:CDS | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | + | chr8_3:7665649-7665668 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | + | chr8_3:7665681-7665700 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | - | chr8_3:7665699-7665718 | Msa1273920:CDS | 45.0% | |
| ! | CAGAATTGAGCTAGTTGGTG+TGG | - | chr8_3:7664739-7664758 | Msa1273920:intron | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | - | chr8_3:7664749-7664768 | Msa1273920:intron | 45.0% |
| TTATGACATGAAGGGCAGTG+AGG | - | chr8_3:7664907-7664926 | Msa1273920:intron | 45.0% | |
| TATGACATGAAGGGCAGTGA+GGG | - | chr8_3:7664908-7664927 | Msa1273920:intron | 45.0% | |
| !! | GCAAACTTGTTGACAGTGCT+AGG | - | chr8_3:7664985-7665004 | Msa1273920:intron | 45.0% |
| CTCTATTGCACAGATGCTGT+TGG | - | chr8_3:7665008-7665027 | Msa1273920:intron | 45.0% | |
| TATTGCACAGATGCTGTTGG+TGG | - | chr8_3:7665011-7665030 | Msa1273920:intron | 45.0% | |
| GGTCCACCAAAGGTAAAAAC+AGG | - | chr8_3:7665032-7665051 | Msa1273920:intron | 45.0% | |
| !!! | GCTCCTGTTTTTACCTTTGG+TGG | + | chr8_3:7665038-7665057 | None:intergenic | 45.0% |
| !! | AGTCTCTCAGGGTTGATACA+TGG | + | chr8_3:7665483-7665502 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | - | chr8_3:7665575-7665594 | Msa1273920:CDS | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | + | chr8_3:7665649-7665668 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | + | chr8_3:7665681-7665700 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | - | chr8_3:7665699-7665718 | Msa1273920:CDS | 45.0% | |
| !! | TGCTGTTGGTGGTCCACCAA+AGG | - | chr8_3:7665022-7665041 | Msa1273920:intron | 55.0% |
| !! | TGCTGTTGGTGGTCCACCAA+AGG | - | chr8_3:7665022-7665041 | Msa1273920:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 7664614 | 7665738 | 7664614 | ID=Msa1273920;Name=Msa1273920 |
| chr8_3 | mRNA | 7664614 | 7665738 | 7664614 | ID=Msa1273920-mRNA-1;Parent=Msa1273920;Name=Msa1273920-mRNA-1;_AED=0.19;_eAED=0.53;_QI=0|0|0|0.66|1|1|3|0|127 |
| chr8_3 | exon | 7665554 | 7665738 | 7665554 | ID=Msa1273920-mRNA-1:exon:3039;Parent=Msa1273920-mRNA-1 |
| chr8_3 | exon | 7665309 | 7665432 | 7665309 | ID=Msa1273920-mRNA-1:exon:3038;Parent=Msa1273920-mRNA-1 |
| chr8_3 | exon | 7664614 | 7664688 | 7664614 | ID=Msa1273920-mRNA-1:exon:3037;Parent=Msa1273920-mRNA-1 |
| chr8_3 | CDS | 7665554 | 7665738 | 7665554 | ID=Msa1273920-mRNA-1:cds;Parent=Msa1273920-mRNA-1 |
| chr8_3 | CDS | 7665309 | 7665432 | 7665309 | ID=Msa1273920-mRNA-1:cds;Parent=Msa1273920-mRNA-1 |
| chr8_3 | CDS | 7664614 | 7664688 | 7664614 | ID=Msa1273920-mRNA-1:cds;Parent=Msa1273920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
