AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1105410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1105410 MtrunA17_Chr7g0237571 87.879 297 7 1 1 268 15 311 0.0 528
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1105410 AT5G48840.1 58.586 297 94 1 1 268 12 308 2.36e-123 354

Find 87 sgRNAs with CRISPR-Local

Find 549 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATCATACAAATTCTT+AGG 0.208868 7_3:+43866112 None:intergenic
CCTAAGAATTTGTATGATTA+TGG 0.220711 7_3:-43866112 Msa1105410:CDS
ATGAATTGTTTAAGCTCTTC+AGG 0.227064 7_3:-43860355 Msa1105410:three_prime_UTR
AAATGTGGAATGGAATAATT+TGG 0.282676 7_3:-43860580 Msa1105410:three_prime_UTR
GCAACCCCTCTAAAGAAAAT+AGG 0.315623 7_3:+43865953 None:intergenic
AGTCATTGGTTAGCATTTCA+TGG 0.352333 7_3:-43860837 Msa1105410:three_prime_UTR
GGGAACAAGTGCAATGAGTT+TGG 0.382875 7_3:+43866333 None:intergenic
ATCCAATGTATTACTGAAGC+TGG 0.396826 7_3:-43861378 Msa1105410:CDS
CCTTGTGTCATCTCAGTCAT+TGG 0.400288 7_3:-43860851 Msa1105410:three_prime_UTR
AATTTGGACGAGTATTTGTA+TGG 0.403449 7_3:-43860564 Msa1105410:three_prime_UTR
ACAAAACCCAAATGAGAAAC+TGG 0.404977 7_3:-43866378 None:intergenic
GCAGCAACACAGAACACAAC+AGG 0.415375 7_3:+43860947 None:intergenic
TGTGTTGAAAAGAGTGGTTT+TGG 0.420937 7_3:-43866034 Msa1105410:CDS
GATTGAAACAACGACGAGAT+TGG 0.439335 7_3:+43866252 None:intergenic
CAAGGTACAAAGCATATGTT+GGG 0.440880 7_3:-43860447 Msa1105410:three_prime_UTR
AGCATATGTTGGGGATAGCT+AGG 0.445737 7_3:-43860437 Msa1105410:three_prime_UTR
AGCTTAAACAATTCATCAAA+AGG 0.446822 7_3:+43860362 None:intergenic
ATTGCACTTGTTCCCACAAT+GGG 0.450249 7_3:-43866325 Msa1105410:CDS
AAGTGCAATGAGTTTGGATT+GGG 0.450798 7_3:+43866339 None:intergenic
TCAACAAAGCTTAGAGAAAG+TGG 0.452021 7_3:-43860984 Msa1105410:CDS
ATGGAAATCAACTTGTAAAA+CGG 0.455195 7_3:-43860893 Msa1105410:exon
CAAGTGCAATGAGTTTGGAT+TGG 0.461303 7_3:+43866338 None:intergenic
TGGTGATGATGGTGGTGAAA+AGG 0.462281 7_3:-43866074 Msa1105410:CDS
GTCATTGGTTAGCATTTCAT+GGG 0.466553 7_3:-43860836 Msa1105410:three_prime_UTR
TGGAGAAGAGGATTGAAGCT+TGG 0.466815 7_3:-43860611 Msa1105410:three_prime_UTR
AATGAAAGAACTAGAAATCA+TGG 0.467771 7_3:+43860313 None:intergenic
GCAAAGTCAGCGGCAGAAGA+TGG 0.467797 7_3:-43861435 Msa1105410:CDS
GGTGATGATGGTGGTGAAAA+GGG 0.468070 7_3:-43866073 Msa1105410:CDS
AAGCTTGAAAAGGGTCTTTG+TGG 0.480175 7_3:-43865986 Msa1105410:CDS
TGAATTGTTTAAGCTCTTCA+GGG 0.480211 7_3:-43860354 Msa1105410:three_prime_UTR
ATGGTGGTGAAAAGGGTGAT+GGG 0.480221 7_3:-43866066 Msa1105410:CDS
TCATTAGGTGAAAACTGACC+TGG 0.484804 7_3:+43866220 None:intergenic
TTCACTTGAAGAGAGGGAAA+AGG 0.485106 7_3:-43861718 Msa1105410:intron
AATAACAAGCTCAATGAAAG+TGG 0.488433 7_3:-43860631 Msa1105410:three_prime_UTR
GTCAGCGGCAGAAGATGGTC+AGG 0.489634 7_3:-43861430 Msa1105410:CDS
TCCAATGTATTACTGAAGCT+GGG 0.490722 7_3:-43861377 Msa1105410:CDS
AACAAGGGAAAATGATGGCC+TGG 0.493379 7_3:-43861766 Msa1105410:CDS
GAGAGTTGAGAAGCTTGAAA+AGG 0.496394 7_3:-43865996 Msa1105410:CDS
TTGAAAATCAGAAGGGTAAG+TGG 0.499981 7_3:+43866189 None:intergenic
ACAAGGTACAAAGCATATGT+TGG 0.505611 7_3:-43860448 Msa1105410:three_prime_UTR
AGGTGGACTGTGAGAAATTG+AGG 0.512861 7_3:-43861410 Msa1105410:CDS
GTTTCTTGTGTTGAAAAGAG+TGG 0.516933 7_3:-43866040 Msa1105410:CDS
CCCCAGCTTCAGTAATACAT+TGG 0.520987 7_3:+43861376 None:intergenic
AGTGATGGTGATGGTGATGA+TGG 0.524978 7_3:-43866085 Msa1105410:CDS
TAAGTGGAGAGATCTTCATT+AGG 0.525388 7_3:+43866205 None:intergenic
TGATAGGTTGTGAAATAACA+AGG 0.526544 7_3:-43861782 Msa1105410:CDS
CATTGCACTTGTTCCCACAA+TGG 0.533329 7_3:-43866326 Msa1105410:CDS
GATGGTGGTGAAAAGGGTGA+TGG 0.535390 7_3:-43866067 Msa1105410:CDS
GTTGGGGATAGCTAGGGAGT+AGG 0.539327 7_3:-43860430 Msa1105410:three_prime_UTR
GAGCTTGTGTTATGAGAGAA+AGG 0.546200 7_3:+43866284 None:intergenic
TTGATGAAGGTAACCCATTG+TGG 0.547526 7_3:+43866312 None:intergenic
GAGAAAGGTGACCTTGATGA+AGG 0.547858 7_3:+43866299 None:intergenic
AGAGTTGAGAAGCTTGAAAA+GGG 0.548717 7_3:-43865995 Msa1105410:CDS
AAATCACCTTGAAAATCAGA+AGG 0.552542 7_3:+43866181 None:intergenic
GCTCAATGAAAGTGGAGAAG+AGG 0.557839 7_3:-43860623 Msa1105410:three_prime_UTR
CATTGCGTGAACTCATCGCC+AGG 0.561251 7_3:+43861748 None:intergenic
GAGAAAGTGGAATTTATCAA+AGG 0.562608 7_3:-43860971 Msa1105410:CDS
TGATGAAGGTAACCCATTGT+GGG 0.565992 7_3:+43866313 None:intergenic
ACATCTTTCACTTGAAGAGA+GGG 0.575250 7_3:-43861724 Msa1105410:CDS
GAAATAACAAGGGAAAATGA+TGG 0.579724 7_3:-43861771 Msa1105410:CDS
TACATCTTTCACTTGAAGAG+AGG 0.582003 7_3:-43861725 Msa1105410:CDS
CCAATGTATTACTGAAGCTG+GGG 0.599586 7_3:-43861376 Msa1105410:CDS
GCATATGTTGGGGATAGCTA+GGG 0.603702 7_3:-43860436 Msa1105410:three_prime_UTR
CATTAGGTGAAAACTGACCT+GGG 0.604922 7_3:+43866221 None:intergenic
TATGATTATGGTGAAAGTGA+TGG 0.605010 7_3:-43866100 Msa1105410:CDS
GGTGACTGCAAAATGTGGAA+TGG 0.609058 7_3:-43860590 Msa1105410:three_prime_UTR
ACAATGGGTTACCTTCATCA+AGG 0.610064 7_3:-43866310 Msa1105410:CDS
AGTCAGGCTTATAGACAACA+TGG 0.617305 7_3:-43860912 Msa1105410:CDS
GATAGGTTGTGAAATAACAA+GGG 0.624385 7_3:-43861781 Msa1105410:CDS
GTTTCAATCTACGTTAACCC+AGG 0.626449 7_3:-43866238 Msa1105410:CDS
GATGGTGATGGTGATGATGG+TGG 0.627027 7_3:-43866082 Msa1105410:CDS
CCAATGACTGAGATGACACA+AGG 0.634192 7_3:+43860851 None:intergenic
AAAACAACATCAACACCACC+AGG 0.641619 7_3:+43866139 None:intergenic
TATGGTGAAAGTGATGGTGA+TGG 0.644226 7_3:-43866094 Msa1105410:CDS
AGCTTGGTGACTGCAAAATG+TGG 0.644676 7_3:-43860595 Msa1105410:three_prime_UTR
AGCGGCAGAAGATGGTCAGG+TGG 0.652788 7_3:-43861427 Msa1105410:CDS
TGGTGGTGAAAAGGGTGATG+GGG 0.653863 7_3:-43866065 Msa1105410:CDS
AATCACCTTGAAAATCAGAA+GGG 0.659949 7_3:+43866182 None:intergenic
CAATGTATTACTGAAGCTGG+GGG 0.667481 7_3:-43861375 Msa1105410:CDS
ACATCTGCAAGCTAACCTTG+TGG 0.677609 7_3:-43860399 Msa1105410:three_prime_UTR
AAATAATCTTGAATGAACAG+TGG 0.682372 7_3:+43860521 None:intergenic
TCATTGGTTAGCATTTCATG+GGG 0.696802 7_3:-43860835 Msa1105410:three_prime_UTR
ATTAACAAGAGCAAAGTCAG+CGG 0.696935 7_3:-43861445 Msa1105410:CDS
AAGGTACAAAGCATATGTTG+GGG 0.744143 7_3:-43860446 Msa1105410:three_prime_UTR
GGGAAGAATTGATTATGCTG+AGG 0.752893 7_3:-43861355 Msa1105410:intron
AAACTTATGAATGTTCCTGG+TGG 0.753325 7_3:-43866154 Msa1105410:CDS
ACAGTGCAAAGCATAGCACA+AGG 0.758525 7_3:-43860465 Msa1105410:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAGTTTTTATTATATATAA+CGG - chr7_3:43864557-43864576 Msa1105410:intron 10.0%
!! TGATTATTAAAAAAATTGTG+GGG + chr7_3:43860980-43860999 None:intergenic 15.0%
!! GTGATTATTAAAAAAATTGT+GGG + chr7_3:43860981-43861000 None:intergenic 15.0%
!! GAAGATATTCAATAATTAAT+GGG + chr7_3:43862866-43862885 None:intergenic 15.0%
!!! TATGAATTTTTAAATTTGGT+AGG - chr7_3:43863160-43863179 Msa1105410:intron 15.0%
!!! GATTTTTAAAAACCAATTTA+AGG - chr7_3:43863639-43863658 Msa1105410:intron 15.0%
!!! TAAAATAAAATGAAGCATTA+GGG + chr7_3:43864225-43864244 None:intergenic 15.0%
!!! TTTAATTTGGAATAAGATTA+AGG - chr7_3:43864642-43864661 Msa1105410:intron 15.0%
!!! CAGCATTATTTTTTTATTAT+TGG + chr7_3:43864988-43865007 None:intergenic 15.0%
!! GATAATATGAAGAAAAAAAA+TGG + chr7_3:43865091-43865110 None:intergenic 15.0%
!! ACTTGCATAAATTATTTATA+AGG - chr7_3:43865953-43865972 Msa1105410:CDS 15.0%
!!! TAACATTATTTTTGGAAATT+TGG - chr7_3:43866359-43866378 Msa1105410:CDS 15.0%
!! GATTATTAAAAAAATTGTGG+GGG + chr7_3:43860979-43860998 None:intergenic 20.0%
!! GGTGATTATTAAAAAAATTG+TGG + chr7_3:43860982-43861001 None:intergenic 20.0%
!!! TATCTACATATATGCTTTTT+AGG - chr7_3:43861548-43861567 Msa1105410:intron 20.0%
!! AGAAGGATAAATAGAAAATA+GGG + chr7_3:43861723-43861742 None:intergenic 20.0%
!! AAGAAGGATAAATAGAAAAT+AGG + chr7_3:43861724-43861743 None:intergenic 20.0%
!!! GATTGGAAAAATACTTTTTT+TGG + chr7_3:43862776-43862795 None:intergenic 20.0%
!!! TAATTAATGGGTTTAATGAT+AGG + chr7_3:43862854-43862873 None:intergenic 20.0%
!! GGAAGATATTCAATAATTAA+TGG + chr7_3:43862867-43862886 None:intergenic 20.0%
!!! TTTTTTGAAAGTAAGAATGA+AGG + chr7_3:43863045-43863064 None:intergenic 20.0%
!!! TTTTAAAAACCAATTTAAGG+AGG - chr7_3:43863642-43863661 Msa1105410:intron 20.0%
!!! GTAAAATAAAATGAAGCATT+AGG + chr7_3:43864226-43864245 None:intergenic 20.0%
!! ATTGAACAACTTAAAAATGT+AGG - chr7_3:43864315-43864334 Msa1105410:intron 20.0%
!!! GTTTTATGAATTGTATCAAT+AGG - chr7_3:43864592-43864611 Msa1105410:intron 20.0%
!! TGGACTAATATTAAATATCA+TGG + chr7_3:43864968-43864987 None:intergenic 20.0%
!!! AAGAAAAAAAATGGATTAAG+GGG + chr7_3:43865082-43865101 None:intergenic 20.0%
!!! GAAGAAAAAAAATGGATTAA+GGG + chr7_3:43865083-43865102 None:intergenic 20.0%
!!! TGAAGAAAAAAAATGGATTA+AGG + chr7_3:43865084-43865103 None:intergenic 20.0%
!! CATAGGTTGTAAATAAATTA+TGG + chr7_3:43865436-43865455 None:intergenic 20.0%
!! TAATTTATTTACAACCTATG+AGG - chr7_3:43865436-43865455 Msa1105410:intron 20.0%
!!! AAGTTTTACATTCATGAATT+TGG + chr7_3:43865463-43865482 None:intergenic 20.0%
!! TTAATTAAACCAAAGCAATA+GGG - chr7_3:43865535-43865554 Msa1105410:intron 20.0%
!!! TTTTTCTACAATCATTTTAC+CGG - chr7_3:43865841-43865860 Msa1105410:intron 20.0%
!!! TTGACTGATAACATTATTTT+TGG - chr7_3:43866351-43866370 Msa1105410:CDS 20.0%
! AAAAAACTTATGAATGTTCC+TGG - chr7_3:43860464-43860483 Msa1105410:three_prime_UTR 25.0%
! CCATAATCATACAAATTCTT+AGG + chr7_3:43860512-43860531 None:intergenic 25.0%
! CCTAAGAATTTGTATGATTA+TGG - chr7_3:43860509-43860528 Msa1105410:three_prime_UTR 25.0%
!!! TTCTTTTTCCTTTAGTTTTG+AGG - chr7_3:43860799-43860818 Msa1105410:intron 25.0%
! TTCAATGTAATCATACATGT+TGG - chr7_3:43861171-43861190 Msa1105410:intron 25.0%
! GAGATAATTAGTTGTTTGTT+TGG - chr7_3:43861267-43861286 Msa1105410:intron 25.0%
!! TTGAGTTGTTTGTTTAACAA+AGG - chr7_3:43861472-43861491 Msa1105410:intron 25.0%
! TTTATCCTTCTTGAAAATTC+CGG - chr7_3:43861732-43861751 Msa1105410:CDS 25.0%
! AAAGAAAATCTCTTTGTATC+CGG + chr7_3:43861780-43861799 None:intergenic 25.0%
!! GATACAAAGAGATTTTCTTT+GGG - chr7_3:43861780-43861799 Msa1105410:CDS 25.0%
!! ATACAAAGAGATTTTCTTTG+GGG - chr7_3:43861781-43861800 Msa1105410:CDS 25.0%
!! AAGTCTTAGTTGAAAAGTAT+GGG - chr7_3:43861974-43861993 Msa1105410:intron 25.0%
!! CAAAAATTGGTTCACAAATA+GGG - chr7_3:43862095-43862114 Msa1105410:intron 25.0%
! ATGAGATAACAAAAATTCGA+GGG + chr7_3:43862203-43862222 None:intergenic 25.0%
!!! TTTTGTTATCTCATCTCAAA+AGG - chr7_3:43862209-43862228 Msa1105410:intron 25.0%
!! TGTTTCGTTTTCCAAAAATA+CGG - chr7_3:43862719-43862738 Msa1105410:intron 25.0%
!!! AAATACTTTTTTTGGCAAAC+CGG + chr7_3:43862768-43862787 None:intergenic 25.0%
! ATTTCCCTAATTATTGATAG+TGG + chr7_3:43862898-43862917 None:intergenic 25.0%
! TATGAATATGGAAATTGCAT+TGG + chr7_3:43862953-43862972 None:intergenic 25.0%
! AAATGCACATACAAATTCTT+AGG + chr7_3:43863517-43863536 None:intergenic 25.0%
!! TGAAAGGTTTTCGTTTAATA+TGG - chr7_3:43863575-43863594 Msa1105410:intron 25.0%
! GTGAATAGTTAATAACAGAA+AGG + chr7_3:43864282-43864301 None:intergenic 25.0%
!!! TTAGATTTTTAGTGGAACTA+TGG - chr7_3:43864378-43864397 Msa1105410:intron 25.0%
! ATACTATTAGACTTCTCATT+AGG - chr7_3:43864488-43864507 Msa1105410:intron 25.0%
! TACTATTAGACTTCTCATTA+GGG - chr7_3:43864489-43864508 Msa1105410:intron 25.0%
! AATAGGAAAGTTATGAAAGA+GGG - chr7_3:43864609-43864628 Msa1105410:intron 25.0%
!! ATTTGGAATAAGATTAAGGA+AGG - chr7_3:43864646-43864665 Msa1105410:intron 25.0%
! TTCAAAGAAAGGAATTGATA+AGG + chr7_3:43864720-43864739 None:intergenic 25.0%
! AAATATTATTGACCAATCAC+TGG + chr7_3:43864764-43864783 None:intergenic 25.0%
!! TTGTCCATAAATAATTTTGC+AGG - chr7_3:43864789-43864808 Msa1105410:intron 25.0%
!! GATTTTTCCATAAAAGTGAT+AGG - chr7_3:43864823-43864842 Msa1105410:intron 25.0%
! TTAAATATCATGGCATGTTT+CGG + chr7_3:43864958-43864977 None:intergenic 25.0%
! TTTAGATGAAGTTTAAGTGA+AGG + chr7_3:43865332-43865351 None:intergenic 25.0%
! ACAGTGTAAATAATTTAGGA+GGG + chr7_3:43865411-43865430 None:intergenic 25.0%
!! CTATTGCTTTGGTTTAATTA+AGG + chr7_3:43865536-43865555 None:intergenic 25.0%
! CTTAATTAAACCAAAGCAAT+AGG - chr7_3:43865534-43865553 Msa1105410:intron 25.0%
! AGGAGGTTATGAATAAATTA+AGG - chr7_3:43865562-43865581 Msa1105410:intron 25.0%
! ATGGAAATCAACTTGTAAAA+CGG - chr7_3:43865728-43865747 Msa1105410:intron 25.0%
!!! AAGTATTTTTTGTCCAGTAA+AGG + chr7_3:43865931-43865950 None:intergenic 25.0%
! AAATGTGGAATGGAATAATT+TGG - chr7_3:43866041-43866060 Msa1105410:CDS 25.0%
! AAATAATCTTGAATGAACAG+TGG + chr7_3:43866103-43866122 None:intergenic 25.0%
!! TCATTCAAGATTATTTTCGT+TGG - chr7_3:43866107-43866126 Msa1105410:CDS 25.0%
! AGCTTAAACAATTCATCAAA+AGG + chr7_3:43866262-43866281 None:intergenic 25.0%
! AATGAAAGAACTAGAAATCA+TGG + chr7_3:43866311-43866330 None:intergenic 25.0%
AATCACCTTGAAAATCAGAA+GGG + chr7_3:43860442-43860461 None:intergenic 30.0%
AAATCACCTTGAAAATCAGA+AGG + chr7_3:43860443-43860462 None:intergenic 30.0%
TATGATTATGGTGAAAGTGA+TGG - chr7_3:43860521-43860540 Msa1105410:three_prime_UTR 30.0%
! AGTAGACCTATTTTCTTTAG+AGG - chr7_3:43860662-43860681 Msa1105410:intron 30.0%
! GTAGACCTATTTTCTTTAGA+GGG - chr7_3:43860663-43860682 Msa1105410:intron 30.0%
!! TAGACCTATTTTCTTTAGAG+GGG - chr7_3:43860664-43860683 Msa1105410:intron 30.0%
TCCAAGATAGGTTATATGAA+GGG - chr7_3:43860946-43860965 Msa1105410:CDS 30.0%
TACGAGGACTAAATTTAACA+AGG + chr7_3:43861003-43861022 None:intergenic 30.0%
!! ATGCATTTGAGTTGTTTATC+TGG - chr7_3:43861044-43861063 Msa1105410:intron 30.0%
!! TGCATTTGAGTTGTTTATCT+GGG - chr7_3:43861045-43861064 Msa1105410:intron 30.0%
! GGATACAAAGAGATTTTCTT+TGG - chr7_3:43861779-43861798 Msa1105410:CDS 30.0%
!! GTAAAACTTGTTGGGTTAAA+TGG - chr7_3:43861827-43861846 Msa1105410:intron 30.0%
! ATATGAGTCTTTTAGCGAAA+TGG - chr7_3:43861911-43861930 Msa1105410:intron 30.0%
CAAGTCTTAGTTGAAAAGTA+TGG - chr7_3:43861973-43861992 Msa1105410:intron 30.0%
! AGTCTTAGTTGAAAAGTATG+GGG - chr7_3:43861975-43861994 Msa1105410:intron 30.0%
! GCAAAAATTGGTTCACAAAT+AGG - chr7_3:43862094-43862113 Msa1105410:intron 30.0%
GATGAGATAACAAAAATTCG+AGG + chr7_3:43862204-43862223 None:intergenic 30.0%
!! GGAGTCTTTATTACTTTTAG+AGG - chr7_3:43862443-43862462 Msa1105410:intron 30.0%
! GTTTCGTTTTCCAAAAATAC+GGG - chr7_3:43862720-43862739 Msa1105410:intron 30.0%
!!! AATACTTTTTTTGGCAAACC+GGG + chr7_3:43862767-43862786 None:intergenic 30.0%
!!! GTTTTTTCTGACTTTCTGAT+TGG + chr7_3:43862793-43862812 None:intergenic 30.0%
ACCCTTCTTAATCTCTTAAA+CGG - chr7_3:43862820-43862839 Msa1105410:intron 30.0%
!! TTATTGATAGTGGCTGTATT+GGG + chr7_3:43862888-43862907 None:intergenic 30.0%
!! ATTATTGATAGTGGCTGTAT+TGG + chr7_3:43862889-43862908 None:intergenic 30.0%
TACAGCCACTATCAATAATT+AGG - chr7_3:43862890-43862909 Msa1105410:intron 30.0%
ACAGCCACTATCAATAATTA+GGG - chr7_3:43862891-43862910 Msa1105410:intron 30.0%
TCCAATAAACCCAAAAATCA+TGG - chr7_3:43862920-43862939 Msa1105410:intron 30.0%
!!! TCCATGATTTTTGGGTTTAT+TGG + chr7_3:43862924-43862943 None:intergenic 30.0%
! ATATGGAAATTGCATTGGTA+AGG + chr7_3:43862948-43862967 None:intergenic 30.0%
TTAAATAAGGAACGTAAGAG+AGG + chr7_3:43862987-43863006 None:intergenic 30.0%
GGTAGAAGACTGATTAAATA+AGG + chr7_3:43863000-43863019 None:intergenic 30.0%
!! ACGAAATAAAAGTGTTGTCT+TGG - chr7_3:43863680-43863699 Msa1105410:intron 30.0%
!!! TAAAAGTGTTGTCTTGGTTT+TGG - chr7_3:43863686-43863705 Msa1105410:intron 30.0%
!!! AAAAGTGTTGTCTTGGTTTT+GGG - chr7_3:43863687-43863706 Msa1105410:intron 30.0%
GAACAACTTAAAAATGTAGG+AGG - chr7_3:43864318-43864337 Msa1105410:intron 30.0%
!! GGGACATTTTAGATTTTTAG+TGG - chr7_3:43864370-43864389 Msa1105410:intron 30.0%
TTTAGTGGAACTATGGTATT+TGG - chr7_3:43864385-43864404 Msa1105410:intron 30.0%
AAGTCTAATAGTATCAGACA+GGG + chr7_3:43864482-43864501 None:intergenic 30.0%
CAATAGGAAAGTTATGAAAG+AGG - chr7_3:43864608-43864627 Msa1105410:intron 30.0%
CGAACCTGCAAAATTATTTA+TGG + chr7_3:43864796-43864815 None:intergenic 30.0%
!! TTCACAACCTATCACTTTTA+TGG + chr7_3:43864833-43864852 None:intergenic 30.0%
TGATAGGTTGTGAAATAACA+AGG - chr7_3:43864839-43864858 Msa1105410:intron 30.0%
GATAGGTTGTGAAATAACAA+GGG - chr7_3:43864840-43864859 Msa1105410:intron 30.0%
GAAATAACAAGGGAAAATGA+TGG - chr7_3:43864850-43864869 Msa1105410:intron 30.0%
!!! TTTTAAAACCGGAAATGAAG+AGG + chr7_3:43865051-43865070 None:intergenic 30.0%
!!! GGGTTTGTAGTTTTTAAAAC+CGG + chr7_3:43865062-43865081 None:intergenic 30.0%
! ATACTTTTCAATCCTTTTGC+AGG - chr7_3:43865134-43865153 Msa1105410:intron 30.0%
GACAGTGTAAATAATTTAGG+AGG + chr7_3:43865412-43865431 None:intergenic 30.0%
GGAGACAGTGTAAATAATTT+AGG + chr7_3:43865415-43865434 None:intergenic 30.0%
GAGAAAGTGGAATTTATCAA+AGG - chr7_3:43865650-43865669 Msa1105410:intron 30.0%
AATAACAAGCTCAATGAAAG+TGG - chr7_3:43865990-43866009 Msa1105410:CDS 30.0%
AATTTGGACGAGTATTTGTA+TGG - chr7_3:43866057-43866076 Msa1105410:CDS 30.0%
! CAAGATTATTTTCGTTGGTA+TGG - chr7_3:43866112-43866131 Msa1105410:CDS 30.0%
GTTGAAAAAACTAATCCACA+AGG + chr7_3:43866240-43866259 None:intergenic 30.0%
ATGAATTGTTTAAGCTCTTC+AGG - chr7_3:43866266-43866285 Msa1105410:CDS 30.0%
TGAATTGTTTAAGCTCTTCA+GGG - chr7_3:43866267-43866286 Msa1105410:CDS 30.0%
AAGTGCAATGAGTTTGGATT+GGG + chr7_3:43860285-43860304 None:intergenic 35.0%
TAAGTGGAGAGATCTTCATT+AGG + chr7_3:43860419-43860438 None:intergenic 35.0%
TTGAAAATCAGAAGGGTAAG+TGG + chr7_3:43860435-43860454 None:intergenic 35.0%
! ACTTACCCTTCTGATTTTCA+AGG - chr7_3:43860434-43860453 Msa1105410:three_prime_UTR 35.0%
AAACTTATGAATGTTCCTGG+TGG - chr7_3:43860467-43860486 Msa1105410:three_prime_UTR 35.0%
GTTTCTTGTGTTGAAAAGAG+TGG - chr7_3:43860581-43860600 Msa1105410:three_prime_UTR 35.0%
! TGTGTTGAAAAGAGTGGTTT+TGG - chr7_3:43860587-43860606 Msa1105410:three_prime_UTR 35.0%
AGAGTTGAGAAGCTTGAAAA+GGG - chr7_3:43860626-43860645 Msa1105410:three_prime_UTR 35.0%
!! TTTTGCTGTGTTTGGGAAAA+AGG - chr7_3:43860730-43860749 Msa1105410:intron 35.0%
CAAACAAGCCTCAAAACTAA+AGG + chr7_3:43860810-43860829 None:intergenic 35.0%
CTCCAAGATAGGTTATATGA+AGG - chr7_3:43860945-43860964 Msa1105410:CDS 35.0%
CCAAGATAGGTTATATGAAG+GGG - chr7_3:43860947-43860966 Msa1105410:CDS 35.0%
TAACCAGCTGAGAAATGTTT+AGG - chr7_3:43861021-43861040 Msa1105410:intron 35.0%
AATTTCACAAGTGGTTATGC+AGG + chr7_3:43861316-43861335 None:intergenic 35.0%
AAGCTGAAAATATGACTAGC+AGG + chr7_3:43861374-43861393 None:intergenic 35.0%
GTCAATTGTTAGACCAATTG+CGG - chr7_3:43861617-43861636 Msa1105410:intron 35.0%
AATAGGGATTGCATTCAAGA+CGG + chr7_3:43861707-43861726 None:intergenic 35.0%
!! AAACTTGTTGGGTTAAATGG+AGG - chr7_3:43861830-43861849 Msa1105410:intron 35.0%
GTTTGTCATCCAAGATCAAA+GGG - chr7_3:43861856-43861875 Msa1105410:intron 35.0%
! GTCTTTTAGCGAAATGGAAA+TGG - chr7_3:43861917-43861936 Msa1105410:intron 35.0%
! AACTAAGACTTGCTTCCAAA+GGG + chr7_3:43861965-43861984 None:intergenic 35.0%
! AAATTGGTTCACAAATAGGG+TGG - chr7_3:43862098-43862117 Msa1105410:intron 35.0%
!!! ATGGGAGTAACACTAGTTTT+TGG - chr7_3:43862136-43862155 Msa1105410:intron 35.0%
!!! GAGTAACACTAGTTTTTGGA+AGG - chr7_3:43862140-43862159 Msa1105410:intron 35.0%
!!! ACACTAGTTTTTGGAAGGAT+AGG - chr7_3:43862145-43862164 Msa1105410:intron 35.0%
!! TTTTGGAAGGATAGGTGAAT+TGG - chr7_3:43862153-43862172 Msa1105410:intron 35.0%
TGTTATCTCATCTCAAAAGG+AGG - chr7_3:43862212-43862231 Msa1105410:intron 35.0%
AGATTCGTTTCCCACAAAAA+CGG + chr7_3:43862306-43862325 None:intergenic 35.0%
GAATCTTATTACTACCCTAG+TGG - chr7_3:43862320-43862339 Msa1105410:intron 35.0%
TAAAGACTCCAACACTCTAT+AGG + chr7_3:43862433-43862452 None:intergenic 35.0%
! TTCTTACCATTTTCCGATTC+CGG + chr7_3:43862589-43862608 None:intergenic 35.0%
GAATCGGAAAATGGTAAGAA+CGG - chr7_3:43862589-43862608 Msa1105410:intron 35.0%
TTGGAAAACGAAACACTAGT+CGG + chr7_3:43862714-43862733 None:intergenic 35.0%
TTCCAAAAATACGGGTATAC+CGG - chr7_3:43862728-43862747 Msa1105410:intron 35.0%
CCCGTTTAAGAGATTAAGAA+GGG + chr7_3:43862824-43862843 None:intergenic 35.0%
CCCTTCTTAATCTCTTAAAC+GGG - chr7_3:43862821-43862840 Msa1105410:intron 35.0%
ACCCGTTTAAGAGATTAAGA+AGG + chr7_3:43862825-43862844 None:intergenic 35.0%
! GGTAAGGTTCCATGATTTTT+GGG + chr7_3:43862932-43862951 None:intergenic 35.0%
! TGGTAAGGTTCCATGATTTT+TGG + chr7_3:43862933-43862952 None:intergenic 35.0%
TTGTTGTCTGCAGAAGTAAT+TGG + chr7_3:43863021-43863040 None:intergenic 35.0%
TCATCTATTCTTGCATTGTG+AGG - chr7_3:43863435-43863454 Msa1105410:intron 35.0%
TGTATGTGCATTTCGAATGT+TGG - chr7_3:43863524-43863543 Msa1105410:intron 35.0%
TAATATGGCATGCCACAATT+TGG - chr7_3:43863590-43863609 Msa1105410:intron 35.0%
TCTCATCAACCTCCTTAAAT+TGG + chr7_3:43863654-43863673 None:intergenic 35.0%
CTTCTTGTCTATTCTATGAG+TGG - chr7_3:43863731-43863750 Msa1105410:intron 35.0%
!! TTTAGCCTTTTTATGCCTTG+CGG - chr7_3:43863942-43863961 Msa1105410:intron 35.0%
TAAAATTACATCACCACACC+AGG + chr7_3:43863981-43864000 None:intergenic 35.0%
!! GGTGTGGTGATGTAATTTTA+AGG - chr7_3:43863981-43864000 Msa1105410:intron 35.0%
AACACACAATGACGTAACTT+AGG + chr7_3:43864103-43864122 None:intergenic 35.0%
! TTTAGAAGCATAGGGAATGA+GGG + chr7_3:43864157-43864176 None:intergenic 35.0%
!! TTTTAGAAGCATAGGGAATG+AGG + chr7_3:43864158-43864177 None:intergenic 35.0%
!! ACCTCACTTTTAGAAGCATA+GGG + chr7_3:43864165-43864184 None:intergenic 35.0%
!! AACCTCACTTTTAGAAGCAT+AGG + chr7_3:43864166-43864185 None:intergenic 35.0%
! TATGCTTCTAAAAGTGAGGT+TGG - chr7_3:43864165-43864184 Msa1105410:intron 35.0%
!! TTGGTGTTAGATGAGCATAT+AGG + chr7_3:43864256-43864275 None:intergenic 35.0%
!! GTTAATAACAGAAAGGCACT+TGG + chr7_3:43864275-43864294 None:intergenic 35.0%
! ATATCCGAAGAAAGCTTTGA+TGG - chr7_3:43864344-43864363 Msa1105410:intron 35.0%
! TTTTCAGACAGTCAAAGCAA+TGG + chr7_3:43864452-43864471 None:intergenic 35.0%
GAAGTCTAATAGTATCAGAC+AGG + chr7_3:43864483-43864502 None:intergenic 35.0%
AATTTCTTGGAGAACCCATA+GGG - chr7_3:43864685-43864704 Msa1105410:intron 35.0%
GAAAGGAATTGATAAGGTCA+AGG + chr7_3:43864714-43864733 None:intergenic 35.0%
TCAATCAGGGTTTCAAAGAA+AGG + chr7_3:43864731-43864750 None:intergenic 35.0%
TGGAAAAAGGTTCTCAATCA+GGG + chr7_3:43864744-43864763 None:intergenic 35.0%
ATTGACCAATCACTGGAAAA+AGG + chr7_3:43864757-43864776 None:intergenic 35.0%
TACATCTTTCACTTGAAGAG+AGG - chr7_3:43864896-43864915 Msa1105410:intron 35.0%
ACATCTTTCACTTGAAGAGA+GGG - chr7_3:43864897-43864916 Msa1105410:intron 35.0%
!! AGGATTGAAAAGTATTACCC+AGG + chr7_3:43865129-43865148 None:intergenic 35.0%
ATTAACAAGAGCAAAGTCAG+CGG - chr7_3:43865176-43865195 Msa1105410:intron 35.0%
TTCATGAATTTGGTCCTCAT+AGG + chr7_3:43865453-43865472 None:intergenic 35.0%
GGTTTAATTAAGGCTCTGTT+AGG + chr7_3:43865526-43865545 None:intergenic 35.0%
AACCAAAGCAATAGGGAATT+AGG - chr7_3:43865542-43865561 Msa1105410:intron 35.0%
TCAACAAAGCTTAGAGAAAG+TGG - chr7_3:43865637-43865656 Msa1105410:intron 35.0%
!!! TTCTGTGTTGCTGCATTTTT+TGG - chr7_3:43865683-43865702 Msa1105410:intron 35.0%
!!! TCTGTGTTGCTGCATTTTTT+GGG - chr7_3:43865684-43865703 Msa1105410:intron 35.0%
! AGTCATTGGTTAGCATTTCA+TGG - chr7_3:43865784-43865803 Msa1105410:intron 35.0%
! GTCATTGGTTAGCATTTCAT+GGG - chr7_3:43865785-43865804 Msa1105410:intron 35.0%
! TCATTGGTTAGCATTTCATG+GGG - chr7_3:43865786-43865805 Msa1105410:intron 35.0%
TCACACAAAATATCATGAGC+CGG + chr7_3:43865863-43865882 None:intergenic 35.0%
CTGATTTCTAACAGTGACAT+AGG + chr7_3:43865893-43865912 None:intergenic 35.0%
ACTGTTAGAAATCAGTGATC+TGG - chr7_3:43865898-43865917 Msa1105410:intron 35.0%
!! ATCTGGTCTTTTTCCTTTAC+TGG - chr7_3:43865915-43865934 Msa1105410:intron 35.0%
ACAAGGTACAAAGCATATGT+TGG - chr7_3:43866173-43866192 Msa1105410:CDS 35.0%
CAAGGTACAAAGCATATGTT+GGG - chr7_3:43866174-43866193 Msa1105410:CDS 35.0%
AAGGTACAAAGCATATGTTG+GGG - chr7_3:43866175-43866194 Msa1105410:CDS 35.0%
CAAGTGCAATGAGTTTGGAT+TGG + chr7_3:43860286-43860305 None:intergenic 40.0%
ATTGCACTTGTTCCCACAAT+GGG - chr7_3:43860296-43860315 Msa1105410:three_prime_UTR 40.0%
TGATGAAGGTAACCCATTGT+GGG + chr7_3:43860311-43860330 None:intergenic 40.0%
TTGATGAAGGTAACCCATTG+TGG + chr7_3:43860312-43860331 None:intergenic 40.0%
!! ACAATGGGTTACCTTCATCA+AGG - chr7_3:43860311-43860330 Msa1105410:three_prime_UTR 40.0%
GAGCTTGTGTTATGAGAGAA+AGG + chr7_3:43860340-43860359 None:intergenic 40.0%
GATTGAAACAACGACGAGAT+TGG + chr7_3:43860372-43860391 None:intergenic 40.0%
GTTTCAATCTACGTTAACCC+AGG - chr7_3:43860383-43860402 Msa1105410:three_prime_UTR 40.0%
CATTAGGTGAAAACTGACCT+GGG + chr7_3:43860403-43860422 None:intergenic 40.0%
TCATTAGGTGAAAACTGACC+TGG + chr7_3:43860404-43860423 None:intergenic 40.0%
AAAACAACATCAACACCACC+AGG + chr7_3:43860485-43860504 None:intergenic 40.0%
! TATGGTGAAAGTGATGGTGA+TGG - chr7_3:43860527-43860546 Msa1105410:three_prime_UTR 40.0%
!!! TGGTTTTGGACATGAGAGTT+GGG - chr7_3:43860601-43860620 Msa1105410:three_prime_UTR 40.0%
GAGAGTTGAGAAGCTTGAAA+AGG - chr7_3:43860625-43860644 Msa1105410:three_prime_UTR 40.0%
AAGCTTGAAAAGGGTCTTTG+TGG - chr7_3:43860635-43860654 Msa1105410:three_prime_UTR 40.0%
! GCAACCCCTCTAAAGAAAAT+AGG + chr7_3:43860671-43860690 None:intergenic 40.0%
!! AGCCTGATTTTGCTGTGTTT+GGG - chr7_3:43860723-43860742 Msa1105410:intron 40.0%
TTCCCAAACACAGCAAAATC+AGG + chr7_3:43860728-43860747 None:intergenic 40.0%
GGAAAAAGGATTATCAGCAG+TGG - chr7_3:43860744-43860763 Msa1105410:intron 40.0%
GTGGAGAGTTATTCAGAGAA+TGG - chr7_3:43860763-43860782 Msa1105410:intron 40.0%
TTTCGTAAGCTCTCCAAGAT+AGG - chr7_3:43860934-43860953 Msa1105410:CDS 40.0%
CCCCTTCATATAACCTATCT+TGG + chr7_3:43860950-43860969 None:intergenic 40.0%
CATCCTAAACATTTCTCAGC+TGG + chr7_3:43861027-43861046 None:intergenic 40.0%
TATAGACACCTGACATGACA+CGG - chr7_3:43861103-43861122 Msa1105410:intron 40.0%
! GCATCGACACTTCAAACTTA+AGG + chr7_3:43861243-43861262 None:intergenic 40.0%
CTCGCAAACAATTTCACAAG+TGG + chr7_3:43861325-43861344 None:intergenic 40.0%
TGTTAGACCAATTGCGGAAT+AGG - chr7_3:43861623-43861642 Msa1105410:intron 40.0%
AGTTAAGCCTATTCCGCAAT+TGG + chr7_3:43861633-43861652 None:intergenic 40.0%
GGTCATAAGTATGTGAGTCT+CGG - chr7_3:43861658-43861677 Msa1105410:intron 40.0%
AGGTGTTAAAGATGGTGATC+CGG - chr7_3:43861758-43861777 Msa1105410:CDS 40.0%
!! CAAAGAGATTTTCTTTGGGG+AGG - chr7_3:43861784-43861803 Msa1105410:CDS 40.0%
! AGGTGGCTGTAAAACTTGTT+GGG - chr7_3:43861819-43861838 Msa1105410:intron 40.0%
TTGTTGGGTTAAATGGAGGA+AGG - chr7_3:43861834-43861853 Msa1105410:intron 40.0%
GGTTTGTCATCCAAGATCAA+AGG - chr7_3:43861855-43861874 Msa1105410:intron 40.0%
! CAACTAAGACTTGCTTCCAA+AGG + chr7_3:43861966-43861985 None:intergenic 40.0%
AAAGACTTGATGTCTCTGGA+GGG - chr7_3:43862063-43862082 Msa1105410:intron 40.0%
! TAGCATTGAAGGGATCACTT+TGG - chr7_3:43862344-43862363 Msa1105410:intron 40.0%
! AGCATTGAAGGGATCACTTT+GGG - chr7_3:43862345-43862364 Msa1105410:intron 40.0%
TGGGGAATGTTGAAGATGAT+TGG - chr7_3:43862364-43862383 Msa1105410:intron 40.0%
GGGGAATGTTGAAGATGATT+GGG - chr7_3:43862365-43862384 Msa1105410:intron 40.0%
ATGTTGAAGATGATTGGGTG+TGG - chr7_3:43862370-43862389 Msa1105410:intron 40.0%
TGGAAAACGAAACACTAGTC+GGG + chr7_3:43862713-43862732 None:intergenic 40.0%
TCCAAAAATACGGGTATACC+GGG - chr7_3:43862729-43862748 Msa1105410:intron 40.0%
! GAAGTTGGGTGCTATGAATA+TGG + chr7_3:43862965-43862984 None:intergenic 40.0%
TCGAGATCCTAAGTAAGATC+GGG + chr7_3:43863236-43863255 None:intergenic 40.0%
CTCGAGATCCTAAGTAAGAT+CGG + chr7_3:43863237-43863256 None:intergenic 40.0%
ATCTCGAGTTTGTCTACCAT+GGG - chr7_3:43863249-43863268 Msa1105410:intron 40.0%
AACGCAAGGTTTACTCAAGT+GGG + chr7_3:43863346-43863365 None:intergenic 40.0%
AAACGCAAGGTTTACTCAAG+TGG + chr7_3:43863347-43863366 None:intergenic 40.0%
CTTGAGTAAACCTTGCGTTT+CGG - chr7_3:43863347-43863366 Msa1105410:intron 40.0%
! GTTTCGGCACATTTTAGATC+CGG - chr7_3:43863363-43863382 Msa1105410:intron 40.0%
TCTATTCTTGCATTGTGAGG+TGG - chr7_3:43863438-43863457 Msa1105410:intron 40.0%
GTGCATTTCGAATGTTGGAA+TGG - chr7_3:43863529-43863548 Msa1105410:intron 40.0%
ATGCCACAATTTGGTCGATT+TGG - chr7_3:43863599-43863618 Msa1105410:intron 40.0%
CTTCCAAATCGACCAAATTG+TGG + chr7_3:43863605-43863624 None:intergenic 40.0%
!! CACAATTTGGTCGATTTGGA+AGG - chr7_3:43863603-43863622 Msa1105410:intron 40.0%
!!! CTTGGTTTTGGGTTTTGAGT+AGG - chr7_3:43863698-43863717 Msa1105410:intron 40.0%
TTACATCAGCAACACAGAAG+CGG + chr7_3:43863843-43863862 None:intergenic 40.0%
! CTTCTGTGTTGCTGATGTAA+GGG - chr7_3:43863843-43863862 Msa1105410:intron 40.0%
!!! CATGTTGTTTTTCTGCTGGA+TGG - chr7_3:43863892-43863911 Msa1105410:intron 40.0%
! TTTTTCTGCTGGATGGTAGT+AGG - chr7_3:43863899-43863918 Msa1105410:intron 40.0%
AAACAAAGCAGCCTAGTACA+AGG + chr7_3:43864039-43864058 None:intergenic 40.0%
CAGCTGATGTAACAAGAATG+AGG + chr7_3:43864128-43864147 None:intergenic 40.0%
CTCATTCTTGTTACATCAGC+TGG - chr7_3:43864126-43864145 Msa1105410:intron 40.0%
! TCCCTATGCTTCTAAAAGTG+AGG - chr7_3:43864161-43864180 Msa1105410:intron 40.0%
TCTAAAAGTGAGGTTGGCAA+TGG - chr7_3:43864171-43864190 Msa1105410:intron 40.0%
CCTTCCATCAAAGCTTTCTT+CGG + chr7_3:43864351-43864370 None:intergenic 40.0%
! CGAAGAAAGCTTTGATGGAA+GGG - chr7_3:43864349-43864368 Msa1105410:intron 40.0%
! GAAGAAAGCTTTGATGGAAG+GGG - chr7_3:43864350-43864369 Msa1105410:intron 40.0%
!! CTTTCGGCTGAGTTTTGATA+TGG + chr7_3:43864413-43864432 None:intergenic 40.0%
AGGAAAGTTATGAAAGAGGG+AGG - chr7_3:43864612-43864631 Msa1105410:intron 40.0%
GGAAAGTTATGAAAGAGGGA+GGG - chr7_3:43864613-43864632 Msa1105410:intron 40.0%
GAAAGTTATGAAAGAGGGAG+GGG - chr7_3:43864614-43864633 Msa1105410:intron 40.0%
GGGAGGGGAGTTATTTAATT+TGG - chr7_3:43864629-43864648 Msa1105410:intron 40.0%
TCTCCAAGAAATTCGAGTCT+CGG + chr7_3:43864678-43864697 None:intergenic 40.0%
GAATTTCTTGGAGAACCCAT+AGG - chr7_3:43864684-43864703 Msa1105410:intron 40.0%
TAAGGTCAAGGTTTCCCTAT+GGG + chr7_3:43864702-43864721 None:intergenic 40.0%
ATAAGGTCAAGGTTTCCCTA+TGG + chr7_3:43864703-43864722 None:intergenic 40.0%
CTGGAAAAAGGTTCTCAATC+AGG + chr7_3:43864745-43864764 None:intergenic 40.0%
! GAGAACCTTTTTCCAGTGAT+TGG - chr7_3:43864749-43864768 Msa1105410:intron 40.0%
TTCACTTGAAGAGAGGGAAA+AGG - chr7_3:43864903-43864922 Msa1105410:intron 40.0%
TGTGCTATCCTCTTCATTTC+CGG - chr7_3:43865040-43865059 Msa1105410:intron 40.0%
ATCTGTCTTCTATCTACACC+TGG - chr7_3:43865108-43865127 Msa1105410:intron 40.0%
TCTGTCTTCTATCTACACCT+GGG - chr7_3:43865109-43865128 Msa1105410:intron 40.0%
TTATAGATAGCGCCTGCAAA+AGG + chr7_3:43865149-43865168 None:intergenic 40.0%
GGGAAGAATTGATTATGCTG+AGG - chr7_3:43865266-43865285 Msa1105410:intron 40.0%
AGGTGCAGACATATTTCAGA+TGG + chr7_3:43865506-43865525 None:intergenic 40.0%
CTCCTAATTCCCTATTGCTT+TGG + chr7_3:43865547-43865566 None:intergenic 40.0%
CAAAGCAATAGGGAATTAGG+AGG - chr7_3:43865545-43865564 Msa1105410:intron 40.0%
!!! CTGCATTTTTTGGGAAAGTC+AGG - chr7_3:43865693-43865712 Msa1105410:intron 40.0%
AGTCAGGCTTATAGACAACA+TGG - chr7_3:43865709-43865728 Msa1105410:intron 40.0%
TTTCATGGGGTAGTAGTCAA+TGG - chr7_3:43865799-43865818 Msa1105410:intron 40.0%
GGTAGTAGTCAATGGAGTAT+AGG - chr7_3:43865807-43865826 Msa1105410:intron 40.0%
GGGAACAAGTGCAATGAGTT+TGG + chr7_3:43860291-43860310 None:intergenic 45.0%
CATTGCACTTGTTCCCACAA+TGG - chr7_3:43860295-43860314 Msa1105410:three_prime_UTR 45.0%
GAGAAAGGTGACCTTGATGA+AGG + chr7_3:43860325-43860344 None:intergenic 45.0%
!! AGTGATGGTGATGGTGATGA+TGG - chr7_3:43860536-43860555 Msa1105410:three_prime_UTR 45.0%
!! TGGTGATGATGGTGGTGAAA+AGG - chr7_3:43860547-43860566 Msa1105410:three_prime_UTR 45.0%
!! GGTGATGATGGTGGTGAAAA+GGG - chr7_3:43860548-43860567 Msa1105410:three_prime_UTR 45.0%
! ATGGTGGTGAAAAGGGTGAT+GGG - chr7_3:43860555-43860574 Msa1105410:three_prime_UTR 45.0%
!!! GTGGTTTTGGACATGAGAGT+TGG - chr7_3:43860600-43860619 Msa1105410:three_prime_UTR 45.0%
!! GAGCCTGATTTTGCTGTGTT+TGG - chr7_3:43860722-43860741 Msa1105410:intron 45.0%
ACATTTCTCAGCTGGTTACG+AGG + chr7_3:43861019-43861038 None:intergenic 45.0%
!! CATACATGTTGGTGTCATGC+CGG - chr7_3:43861182-43861201 Msa1105410:intron 45.0%
TGCGGAATAGGCTTAACTCT+TGG - chr7_3:43861635-43861654 Msa1105410:intron 45.0%
GCGGAATAGGCTTAACTCTT+GGG - chr7_3:43861636-43861655 Msa1105410:intron 45.0%
CGGAATAGGCTTAACTCTTG+GGG - chr7_3:43861637-43861656 Msa1105410:intron 45.0%
CATAAGTATGTGAGTCTCGG+CGG - chr7_3:43861661-43861680 Msa1105410:intron 45.0%
!! CTTCGCCGGAATTTTCAAGA+AGG + chr7_3:43861740-43861759 None:intergenic 45.0%
CTTCTTGAAAATTCCGGCGA+AGG - chr7_3:43861738-43861757 Msa1105410:CDS 45.0%
ACCATCTTTAACACCTTCGC+CGG + chr7_3:43861754-43861773 None:intergenic 45.0%
GAGGTGGCTGTAAAACTTGT+TGG - chr7_3:43861818-43861837 Msa1105410:intron 45.0%
TGTCATCCAAGATCAAAGGG+AGG - chr7_3:43861859-43861878 Msa1105410:intron 45.0%
TCCAAGATCAAAGGGAGGTT+TGG - chr7_3:43861864-43861883 Msa1105410:intron 45.0%
CCAAGATCAAAGGGAGGTTT+GGG - chr7_3:43861865-43861884 Msa1105410:intron 45.0%
CAAGATCAAAGGGAGGTTTG+GGG - chr7_3:43861866-43861885 Msa1105410:intron 45.0%
AAGATCAAAGGGAGGTTTGG+GGG - chr7_3:43861867-43861886 Msa1105410:intron 45.0%
GAAATGGCGTCTACTTCAAG+AGG - chr7_3:43861933-43861952 Msa1105410:intron 45.0%
!! TTCAAGAGGAGCATTCCCTT+TGG - chr7_3:43861947-43861966 Msa1105410:intron 45.0%
AAGTATGGGGACCAAGTTAG+TGG - chr7_3:43861988-43862007 Msa1105410:intron 45.0%
CATCAAGTCTTTCCACCACA+GGG + chr7_3:43862055-43862074 None:intergenic 45.0%
ACATCAAGTCTTTCCACCAC+AGG + chr7_3:43862056-43862075 None:intergenic 45.0%
GTGGAAAGACTTGATGTCTC+TGG - chr7_3:43862059-43862078 Msa1105410:intron 45.0%
GAAAGACTTGATGTCTCTGG+AGG - chr7_3:43862062-43862081 Msa1105410:intron 45.0%
! AAGACTTGATGTCTCTGGAG+GGG - chr7_3:43862064-43862083 Msa1105410:intron 45.0%
CTCATCTCAAAAGGAGGCTA+AGG - chr7_3:43862218-43862237 Msa1105410:intron 45.0%
TCAAAAGGAGGCTAAGGTGA+GGG - chr7_3:43862224-43862243 Msa1105410:intron 45.0%
TCCTCCAAACAAGATTCCTC+CGG + chr7_3:43862278-43862297 None:intergenic 45.0%
!! GAGGAGACATCCGTTTTTGT+GGG - chr7_3:43862293-43862312 Msa1105410:intron 45.0%
GCATTGAAGGGATCACTTTG+GGG - chr7_3:43862346-43862365 Msa1105410:intron 45.0%
GCGTTCTTCCTATAGAGTGT+TGG - chr7_3:43862422-43862441 Msa1105410:intron 45.0%
TGGTAGACAAACTCTCGATC+TGG - chr7_3:43862507-43862526 Msa1105410:intron 45.0%
ATCTGGACCGTAGAATCGTA+CGG - chr7_3:43862524-43862543 Msa1105410:intron 45.0%
GGAAAATGGTAAGAACGGCT+TGG - chr7_3:43862594-43862613 Msa1105410:intron 45.0%
TCTGGGTTTCCAACCTAACT+CGG + chr7_3:43862663-43862682 None:intergenic 45.0%
AGGTTGGAAACCCAGAAAAC+CGG - chr7_3:43862667-43862686 Msa1105410:intron 45.0%
! ACCCGGTATACCCGTATTTT+TGG + chr7_3:43862733-43862752 None:intergenic 45.0%
AAAATACGGGTATACCGGGT+CGG - chr7_3:43862733-43862752 Msa1105410:intron 45.0%
GGAACGTAAGAGAGGAAGTT+GGG + chr7_3:43862979-43862998 None:intergenic 45.0%
AGGAACGTAAGAGAGGAAGT+TGG + chr7_3:43862980-43862999 None:intergenic 45.0%
GATCCTAAGTAAGATCGGGA+AGG + chr7_3:43863232-43863251 None:intergenic 45.0%
GATCTCGAGTTTGTCTACCA+TGG - chr7_3:43863248-43863267 Msa1105410:intron 45.0%
GAAAAAGCCACCACTTTGGA+AGG + chr7_3:43863298-43863317 None:intergenic 45.0%
CCAAGAAAAAGCCACCACTT+TGG + chr7_3:43863302-43863321 None:intergenic 45.0%
!! CCAAAGTGGTGGCTTTTTCT+TGG - chr7_3:43863299-43863318 Msa1105410:intron 45.0%
CTAAAATGTGCCGAAACGCA+AGG + chr7_3:43863360-43863379 None:intergenic 45.0%
!! TTTGGCGTGGAGTGTTGAAT+TGG - chr7_3:43863470-43863489 Msa1105410:intron 45.0%
! ACCTCTAAGCGGCTTTTGAA+AGG - chr7_3:43863559-43863578 Msa1105410:intron 45.0%
ACCTTTCAAAAGCCGCTTAG+AGG + chr7_3:43863563-43863582 None:intergenic 45.0%
TTTGGAAGGAGAGAAATGCG+AGG - chr7_3:43863617-43863636 Msa1105410:intron 45.0%
GTCTATTCTATGAGTGGTCG+TGG - chr7_3:43863737-43863756 Msa1105410:intron 45.0%
CTTCTCTTTAGGCACTCTCT+AGG + chr7_3:43863766-43863785 None:intergenic 45.0%
!! CTAGAGAGTGCCTAAAGAGA+AGG - chr7_3:43863764-43863783 Msa1105410:intron 45.0%
! AGAGTGCCTAAAGAGAAGGT+GGG - chr7_3:43863768-43863787 Msa1105410:intron 45.0%
! GCTTCTGTGTTGCTGATGTA+AGG - chr7_3:43863842-43863861 Msa1105410:intron 45.0%
TCTGCTGTGTATTGTTTGCC+TGG - chr7_3:43863869-43863888 Msa1105410:intron 45.0%
CAGCAGAAAAACAACATGCC+AGG + chr7_3:43863890-43863909 None:intergenic 45.0%
!!! CTGGCATGTTGTTTTTCTGC+TGG - chr7_3:43863888-43863907 Msa1105410:intron 45.0%
! GGTAGTAGGCATCTGTTTTG+CGG - chr7_3:43863913-43863932 Msa1105410:intron 45.0%
AACAGCCGCAAGGCATAAAA+AGG + chr7_3:43863950-43863969 None:intergenic 45.0%
! TTTTTATGCCTTGCGGCTGT+TGG - chr7_3:43863949-43863968 Msa1105410:intron 45.0%
!!! CTGTTGGTTTTTTCCTGGTG+TGG - chr7_3:43863965-43863984 Msa1105410:intron 45.0%
! CCTAGTACAAGGAGTGCAAT+AGG + chr7_3:43864028-43864047 None:intergenic 45.0%
CCTATTGCACTCCTTGTACT+AGG - chr7_3:43864025-43864044 Msa1105410:intron 45.0%
AAAGTGAGGTTGGCAATGGT+TGG - chr7_3:43864175-43864194 Msa1105410:intron 45.0%
TGGCAATGGTTGGATGATGA+AGG - chr7_3:43864185-43864204 Msa1105410:intron 45.0%
! CCGAAGAAAGCTTTGATGGA+AGG - chr7_3:43864348-43864367 Msa1105410:intron 45.0%
GATCCGAGACTCGAATTTCT+TGG - chr7_3:43864672-43864691 Msa1105410:intron 45.0%
AACAAGGGAAAATGATGGCC+TGG - chr7_3:43864855-43864874 Msa1105410:intron 45.0%
!! AGGTGGACTGTGAGAAATTG+AGG - chr7_3:43865211-43865230 Msa1105410:intron 45.0%
!! TCTAAAAGCACCCAGTTCTG+TGG - chr7_3:43865346-43865365 Msa1105410:intron 45.0%
GAGGGTTGTAAAGTTGTGCA+TGG + chr7_3:43865393-43865412 None:intergenic 45.0%
CCAATGACTGAGATGACACA+AGG + chr7_3:43865773-43865792 None:intergenic 45.0%
CCTTGTGTCATCTCAGTCAT+TGG - chr7_3:43865770-43865789 Msa1105410:intron 45.0%
GCTCAATGAAAGTGGAGAAG+AGG - chr7_3:43865998-43866017 Msa1105410:CDS 45.0%
TGGAGAAGAGGATTGAAGCT+TGG - chr7_3:43866010-43866029 Msa1105410:CDS 45.0%
! AGCTTGGTGACTGCAAAATG+TGG - chr7_3:43866026-43866045 Msa1105410:CDS 45.0%
GGTGACTGCAAAATGTGGAA+TGG - chr7_3:43866031-43866050 Msa1105410:CDS 45.0%
ACAGTGCAAAGCATAGCACA+AGG - chr7_3:43866156-43866175 Msa1105410:CDS 45.0%
AGCATATGTTGGGGATAGCT+AGG - chr7_3:43866184-43866203 Msa1105410:CDS 45.0%
GCATATGTTGGGGATAGCTA+GGG - chr7_3:43866185-43866204 Msa1105410:CDS 45.0%
ACATCTGCAAGCTAACCTTG+TGG - chr7_3:43866222-43866241 Msa1105410:CDS 45.0%
!!! TATATATGAATTTTTAAATT+TGG - chr7_3:43863156-43863175 Msa1105410:intron 5.0%
!! GATGGTGATGGTGATGATGG+TGG - chr7_3:43860539-43860558 Msa1105410:three_prime_UTR 50.0%
! GATGGTGGTGAAAAGGGTGA+TGG - chr7_3:43860554-43860573 Msa1105410:three_prime_UTR 50.0%
! TGGTGGTGAAAAGGGTGATG+GGG - chr7_3:43860556-43860575 Msa1105410:three_prime_UTR 50.0%
CTCAATGTCCGTGTCATGTC+AGG + chr7_3:43861114-43861133 None:intergenic 50.0%
!! TCCGGCGAAGGTGTTAAAGA+TGG - chr7_3:43861750-43861769 Msa1105410:CDS 50.0%
TGGGGAGGTCTTACTCTTAG+AGG - chr7_3:43861799-43861818 Msa1105410:CDS 50.0%
GGAGGTCTTACTCTTAGAGG+TGG - chr7_3:43861802-43861821 Msa1105410:CDS 50.0%
CCCAAACCTCCCTTTGATCT+TGG + chr7_3:43861868-43861887 None:intergenic 50.0%
AAAGGGAGGTTTGGGGGTTA+GGG - chr7_3:43861873-43861892 Msa1105410:intron 50.0%
TGGGGACCAAGTTAGTGGTT+TGG - chr7_3:43861993-43862012 Msa1105410:intron 50.0%
! CCAAGTTAGTGGTTTGGCAC+CGG - chr7_3:43861999-43862018 Msa1105410:intron 50.0%
CACAAATAGGGTGGTGCGAA+AGG - chr7_3:43862107-43862126 Msa1105410:intron 50.0%
AATAGGGTGGTGCGAAAGGT+AGG - chr7_3:43862111-43862130 Msa1105410:intron 50.0%
TGGTGCGAAAGGTAGGCAAT+GGG - chr7_3:43862118-43862137 Msa1105410:intron 50.0%
CTCAAAAGGAGGCTAAGGTG+AGG - chr7_3:43862223-43862242 Msa1105410:intron 50.0%
! ACGTGTCGGTGATGCAAGAA+GGG - chr7_3:43862247-43862266 Msa1105410:intron 50.0%
!! GGAGGAGACATCCGTTTTTG+TGG - chr7_3:43862292-43862311 Msa1105410:intron 50.0%
! ACCCTAGTGGCTAGCATTGA+AGG - chr7_3:43862333-43862352 Msa1105410:intron 50.0%
CCCTTCAATGCTAGCCACTA+GGG + chr7_3:43862337-43862356 None:intergenic 50.0%
! CCCTAGTGGCTAGCATTGAA+GGG - chr7_3:43862334-43862353 Msa1105410:intron 50.0%
TCCCTTCAATGCTAGCCACT+AGG + chr7_3:43862338-43862357 None:intergenic 50.0%
AGATGATTGGGTGTGGACTC+CGG - chr7_3:43862377-43862396 Msa1105410:intron 50.0%
AGAGGAAGAGTTGAGTGCGT+TGG - chr7_3:43862461-43862480 Msa1105410:intron 50.0%
AGTTGAGTGCGTTGGAGGAA+GGG - chr7_3:43862469-43862488 Msa1105410:intron 50.0%
CGTGGAACCGTACGATTCTA+CGG + chr7_3:43862534-43862553 None:intergenic 50.0%
AACGTAGATCCAGCCGAGTT+AGG - chr7_3:43862647-43862666 Msa1105410:intron 50.0%
TAGATCCAGCCGAGTTAGGT+TGG - chr7_3:43862651-43862670 Msa1105410:intron 50.0%
GGTTGGAAACCCAGAAAACC+GGG - chr7_3:43862668-43862687 Msa1105410:intron 50.0%
AAATACGGGTATACCGGGTC+GGG - chr7_3:43862734-43862753 Msa1105410:intron 50.0%
TGAATCGGGGGATCGTAACA+CGG + chr7_3:43863196-43863215 None:intergenic 50.0%
ACCCATGAGATCGTGAATCG+GGG + chr7_3:43863209-43863228 None:intergenic 50.0%
GACCCATGAGATCGTGAATC+GGG + chr7_3:43863210-43863229 None:intergenic 50.0%
GGACCCATGAGATCGTGAAT+CGG + chr7_3:43863211-43863230 None:intergenic 50.0%
GGTCCTTCCCGATCTTACTT+AGG - chr7_3:43863226-43863245 Msa1105410:intron 50.0%
GTCTACCATGGGCGAGTTTA+TGG - chr7_3:43863260-43863279 Msa1105410:intron 50.0%
CTCTTCCATAAACTCGCCCA+TGG + chr7_3:43863268-43863287 None:intergenic 50.0%
GGCGAGTTTATGGAAGAGTC+CGG - chr7_3:43863270-43863289 Msa1105410:intron 50.0%
! TCGGCACATTTTAGATCCGG+AGG - chr7_3:43863366-43863385 Msa1105410:intron 50.0%
CCACACAACACACAGGTAAG+GGG + chr7_3:43863394-43863413 None:intergenic 50.0%
CCCACACAACACACAGGTAA+GGG + chr7_3:43863395-43863414 None:intergenic 50.0%
CCCTTACCTGTGTGTTGTGT+GGG - chr7_3:43863392-43863411 Msa1105410:intron 50.0%
CTGTGTGTTGTGTGGGCAAA+GGG - chr7_3:43863399-43863418 Msa1105410:intron 50.0%
CACTCCACGCCAAATCTTAG+CGG + chr7_3:43863464-43863483 None:intergenic 50.0%
ATGGTGAAGCGACCTCTAAG+CGG - chr7_3:43863548-43863567 Msa1105410:intron 50.0%
!! GAGAGTGCCTAAAGAGAAGG+TGG - chr7_3:43863767-43863786 Msa1105410:intron 50.0%
AGCAGTCCCACCTTCTCTTT+AGG + chr7_3:43863777-43863796 None:intergenic 50.0%
!! CTGTTGGTTTGGGAGCTGTA+GGG - chr7_3:43863795-43863814 Msa1105410:intron 50.0%
!! TGTTGGTTTGGGAGCTGTAG+GGG - chr7_3:43863796-43863815 Msa1105410:intron 50.0%
AGCTGTAGGGGAGTTCTGTT+GGG - chr7_3:43863808-43863827 Msa1105410:intron 50.0%
GGAAAAAACCAACAGCCGCA+AGG + chr7_3:43863960-43863979 None:intergenic 50.0%
!!! TGCGGCTGTTGGTTTTTTCC+TGG - chr7_3:43863960-43863979 Msa1105410:intron 50.0%
! AAGGAGTGCAATAGGCTGGA+AGG + chr7_3:43864020-43864039 None:intergenic 50.0%
! GTACAAGGAGTGCAATAGGC+TGG + chr7_3:43864024-43864043 None:intergenic 50.0%
CCAAGGTGGCAGATTGCTTT+CGG + chr7_3:43864429-43864448 None:intergenic 50.0%
AGTCAAAGCAATGGCCAAGG+TGG + chr7_3:43864443-43864462 None:intergenic 50.0%
GACAGTCAAAGCAATGGCCA+AGG + chr7_3:43864446-43864465 None:intergenic 50.0%
! AAAGCACCCAGTTCTGTGGT+TGG - chr7_3:43865350-43865369 Msa1105410:intron 50.0%
AACAGGCCAACCACAGAACT+GGG + chr7_3:43865359-43865378 None:intergenic 50.0%
!! GCATGGACTAGACTACCAAC+AGG + chr7_3:43865376-43865395 None:intergenic 50.0%
GCAGCAACACAGAACACAAC+AGG + chr7_3:43865677-43865696 None:intergenic 50.0%
!! TGTTGGTGTCATGCCGGTGT+TGG - chr7_3:43861188-43861207 Msa1105410:intron 55.0%
CACGTGTCAGTGTCCAACAC+CGG + chr7_3:43861204-43861223 None:intergenic 55.0%
CAAAGGGAGGTTTGGGGGTT+AGG - chr7_3:43861872-43861891 Msa1105410:intron 55.0%
! CCGGTGCCAAACCACTAACT+TGG + chr7_3:43862002-43862021 None:intergenic 55.0%
! AGTTAGTGGTTTGGCACCGG+TGG - chr7_3:43862002-43862021 Msa1105410:intron 55.0%
CACCACAGGGAGGTAAACCT+TGG + chr7_3:43862042-43862061 None:intergenic 55.0%
CAAGGTTTACCTCCCTGTGG+TGG - chr7_3:43862040-43862059 Msa1105410:intron 55.0%
CAAGTCTTTCCACCACAGGG+AGG + chr7_3:43862052-43862071 None:intergenic 55.0%
! AGGGGAGCGTGGGCAAAAAT+TGG - chr7_3:43862082-43862101 Msa1105410:intron 55.0%
GTGGTGCGAAAGGTAGGCAA+TGG - chr7_3:43862117-43862136 Msa1105410:intron 55.0%
! GACGTGTCGGTGATGCAAGA+AGG - chr7_3:43862246-43862265 Msa1105410:intron 55.0%
! CGTGTCGGTGATGCAAGAAG+GGG - chr7_3:43862248-43862267 Msa1105410:intron 55.0%
TGCGCCGGAGGAATCTTGTT+TGG - chr7_3:43862271-43862290 Msa1105410:intron 55.0%
! GCCGGAGGAATCTTGTTTGG+AGG - chr7_3:43862274-43862293 Msa1105410:intron 55.0%
GAGAACTTCCCACCTTCCTC+CGG + chr7_3:43862399-43862418 None:intergenic 55.0%
GGAGGAAGGTGGGAAGTTCT+CGG - chr7_3:43862398-43862417 Msa1105410:intron 55.0%
GGAAGAGTTGAGTGCGTTGG+AGG - chr7_3:43862464-43862483 Msa1105410:intron 55.0%
GAGTTGAGTGCGTTGGAGGA+AGG - chr7_3:43862468-43862487 Msa1105410:intron 55.0%
GTTGAGTGCGTTGGAGGAAG+GGG - chr7_3:43862470-43862489 Msa1105410:intron 55.0%
!! AAGGGGTGTTGGCGAGTTCA+TGG - chr7_3:43862487-43862506 Msa1105410:intron 55.0%
GAAGAGGTCAGGCAAGATCG+TGG + chr7_3:43862552-43862571 None:intergenic 55.0%
CCTATGAGCACGAAGAGGTC+AGG + chr7_3:43862563-43862582 None:intergenic 55.0%
CCTGACCTCTTCGTGCTCAT+AGG - chr7_3:43862560-43862579 Msa1105410:intron 55.0%
GACCTCTTCGTGCTCATAGG+TGG - chr7_3:43862563-43862582 Msa1105410:intron 55.0%
TCTTCGTGCTCATAGGTGGC+CGG - chr7_3:43862567-43862586 Msa1105410:intron 55.0%
TGCTCATAGGTGGCCGGAAT+CGG - chr7_3:43862573-43862592 Msa1105410:intron 55.0%
AGGTGGCCGGAATCGGAAAA+TGG - chr7_3:43862580-43862599 Msa1105410:intron 55.0%
GGTTTCCAACCTAACTCGGC+TGG + chr7_3:43862659-43862678 None:intergenic 55.0%
AACCCAGAAAACCGGGTTCG+CGG - chr7_3:43862675-43862694 Msa1105410:intron 55.0%
TCCCCCGATTCACGATCTCA+TGG - chr7_3:43863204-43863223 Msa1105410:intron 55.0%
CCCATGAGATCGTGAATCGG+GGG + chr7_3:43863208-43863227 None:intergenic 55.0%
CCCCCGATTCACGATCTCAT+GGG - chr7_3:43863205-43863224 Msa1105410:intron 55.0%
CCCCTTACCTGTGTGTTGTG+TGG - chr7_3:43863391-43863410 Msa1105410:intron 55.0%
GCCCACACAACACACAGGTA+AGG + chr7_3:43863396-43863415 None:intergenic 55.0%
CCTTTGCCCACACAACACAC+AGG + chr7_3:43863401-43863420 None:intergenic 55.0%
CCTGTGTGTTGTGTGGGCAA+AGG - chr7_3:43863398-43863417 Msa1105410:intron 55.0%
TGTGTTGTGTGGGCAAAGGG+AGG - chr7_3:43863402-43863421 Msa1105410:intron 55.0%
GTGAGGTGGCCGCTAAGATT+TGG - chr7_3:43863452-43863471 Msa1105410:intron 55.0%
AGAGAAGGTGGGACTGCTGT+TGG - chr7_3:43863779-43863798 Msa1105410:intron 55.0%
! AGGTGGGACTGCTGTTGGTT+TGG - chr7_3:43863784-43863803 Msa1105410:intron 55.0%
!! GGTGGGACTGCTGTTGGTTT+GGG - chr7_3:43863785-43863804 Msa1105410:intron 55.0%
!! GCTGTTGGTTTGGGAGCTGT+AGG - chr7_3:43863794-43863813 Msa1105410:intron 55.0%
GAGCTGTAGGGGAGTTCTGT+TGG - chr7_3:43863807-43863826 Msa1105410:intron 55.0%
CCGAAAGCAATCTGCCACCT+TGG - chr7_3:43864426-43864445 Msa1105410:intron 55.0%
CATTGCGTGAACTCATCGCC+AGG + chr7_3:43864876-43864895 None:intergenic 55.0%
GCAAAGTCAGCGGCAGAAGA+TGG - chr7_3:43865186-43865205 Msa1105410:intron 55.0%
CAACAGGCCAACCACAGAAC+TGG + chr7_3:43865360-43865379 None:intergenic 55.0%
!! CAGTTCTGTGGTTGGCCTGT+TGG - chr7_3:43865358-43865377 Msa1105410:intron 55.0%
GTTGGGGATAGCTAGGGAGT+AGG - chr7_3:43866191-43866210 Msa1105410:CDS 55.0%
GGGGGTTAGGGATGTGAGAG+TGG - chr7_3:43861885-43861904 Msa1105410:intron 60.0%
!! TAGTGGTTTGGCACCGGTGG+AGG - chr7_3:43862005-43862024 Msa1105410:intron 60.0%
!! AGTGGTTTGGCACCGGTGGA+GGG - chr7_3:43862006-43862025 Msa1105410:intron 60.0%
TGGAGGGGTTTAGGTGGCCA+AGG - chr7_3:43862022-43862041 Msa1105410:intron 60.0%
GGCCAAGGTTTACCTCCCTG+TGG - chr7_3:43862037-43862056 Msa1105410:intron 60.0%
! ATGTCTCTGGAGGGGAGCGT+GGG - chr7_3:43862072-43862091 Msa1105410:intron 60.0%
GGCTAAGGTGAGGGACGTGT+CGG - chr7_3:43862233-43862252 Msa1105410:intron 60.0%
! TGATGCAAGAAGGGGTGCGC+CGG - chr7_3:43862256-43862275 Msa1105410:intron 60.0%
TGATTGGGTGTGGACTCCGG+AGG - chr7_3:43862380-43862399 Msa1105410:intron 60.0%
TGTGGACTCCGGAGGAAGGT+GGG - chr7_3:43862388-43862407 Msa1105410:intron 60.0%
! TGCGTTGGAGGAAGGGGTGT+TGG - chr7_3:43862476-43862495 Msa1105410:intron 60.0%
GGCCACCTATGAGCACGAAG+AGG + chr7_3:43862568-43862587 None:intergenic 60.0%
CTACGTTACCACCGCGTCCA+CGG + chr7_3:43862634-43862653 None:intergenic 60.0%
ACCCAGAAAACCGGGTTCGC+GGG - chr7_3:43862676-43862695 Msa1105410:intron 60.0%
! ACCCGCGAACCCGGTTTTCT+GGG + chr7_3:43862680-43862699 None:intergenic 60.0%
GAGTCCGGCACCTTCCAAAG+TGG - chr7_3:43863285-43863304 Msa1105410:intron 60.0%
TCCGGCACCTTCCAAAGTGG+TGG - chr7_3:43863288-43863307 Msa1105410:intron 60.0%
! GCCACCACTTTGGAAGGTGC+CGG + chr7_3:43863292-43863311 None:intergenic 60.0%
!! ACACAGGTAAGGGGCACCTC+CGG + chr7_3:43863385-43863404 None:intergenic 60.0%
GTGGCCGCTAAGATTTGGCG+TGG - chr7_3:43863457-43863476 Msa1105410:intron 60.0%
GTCAGCGGCAGAAGATGGTC+AGG - chr7_3:43865191-43865210 Msa1105410:intron 60.0%
AGCGGCAGAAGATGGTCAGG+TGG - chr7_3:43865194-43865213 Msa1105410:intron 60.0%
!! GTGGTTTGGCACCGGTGGAG+GGG - chr7_3:43862007-43862026 Msa1105410:intron 65.0%
!! TGGCACCGGTGGAGGGGTTT+AGG - chr7_3:43862013-43862032 Msa1105410:intron 65.0%
CACCGGTGGAGGGGTTTAGG+TGG - chr7_3:43862016-43862035 Msa1105410:intron 65.0%
GGCCACCTAAACCCCTCCAC+CGG + chr7_3:43862021-43862040 None:intergenic 65.0%
! GATGTCTCTGGAGGGGAGCG+TGG - chr7_3:43862071-43862090 Msa1105410:intron 65.0%
TGGGTGTGGACTCCGGAGGA+AGG - chr7_3:43862384-43862403 Msa1105410:intron 65.0%
GTGTGGACTCCGGAGGAAGG+TGG - chr7_3:43862387-43862406 Msa1105410:intron 65.0%
! GACCCGCGAACCCGGTTTTC+TGG + chr7_3:43862681-43862700 None:intergenic 65.0%
CGTGAAACGACCCGCGAACC+CGG + chr7_3:43862689-43862708 None:intergenic 65.0%
! TGCAAGAAGGGGTGCGCCGG+AGG - chr7_3:43862259-43862278 Msa1105410:intron 70.0%
TGGATCGCCGCGCAAAGCCG+TGG - chr7_3:43862614-43862633 Msa1105410:intron 70.0%
ACCGCGTCCACGGCTTTGCG+CGG + chr7_3:43862624-43862643 None:intergenic 70.0%
ACCGGGTCGGGTTCGTGACC+CGG - chr7_3:43862746-43862765 Msa1105410:intron 70.0%
ACCGGGTCACGAACCCGACC+CGG + chr7_3:43862750-43862769 None:intergenic 70.0%
GCCGCGCAAAGCCGTGGACG+CGG - chr7_3:43862620-43862639 Msa1105410:intron 75.0%
GCGCAAAGCCGTGGACGCGG+TGG - chr7_3:43862623-43862642 Msa1105410:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 43860254 43866389 43860254 ID=Msa1105410;Name=Msa1105410
chr7_3 mRNA 43860254 43866389 43860254 ID=Msa1105410-mRNA-1;Parent=Msa1105410;Name=Msa1105410-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.75|0.8|1|0.75|0.6|5|485|268
chr7_3 exon 43860254 43860670 43860254 ID=Msa1105410-mRNA-1:exon:9041;Parent=Msa1105410-mRNA-1
chr7_3 exon 43860830 43861014 43860830 ID=Msa1105410-mRNA-1:exon:9040;Parent=Msa1105410-mRNA-1
chr7_3 exon 43861356 43861487 43861356 ID=Msa1105410-mRNA-1:exon:9039;Parent=Msa1105410-mRNA-1
chr7_3 exon 43861719 43861832 43861719 ID=Msa1105410-mRNA-1:exon:9038;Parent=Msa1105410-mRNA-1
chr7_3 exon 43865946 43866389 43865946 ID=Msa1105410-mRNA-1:exon:9037;Parent=Msa1105410-mRNA-1
chr7_3 CDS 43865946 43866389 43865946 ID=Msa1105410-mRNA-1:cds;Parent=Msa1105410-mRNA-1
chr7_3 CDS 43861719 43861832 43861719 ID=Msa1105410-mRNA-1:cds;Parent=Msa1105410-mRNA-1
chr7_3 CDS 43861356 43861487 43861356 ID=Msa1105410-mRNA-1:cds;Parent=Msa1105410-mRNA-1
chr7_3 CDS 43860898 43861014 43860898 ID=Msa1105410-mRNA-1:cds;Parent=Msa1105410-mRNA-1
chr7_3 three_prime_UTR 43860830 43860897 43860830 ID=Msa1105410-mRNA-1:three_prime_utr;Parent=Msa1105410-mRNA-1
chr7_3 three_prime_UTR 43860254 43860670 43860254 ID=Msa1105410-mRNA-1:three_prime_utr;Parent=Msa1105410-mRNA-1
Gene Sequence

>Msa1105410

ATGAGAAACTGGTCAAGAACAATGAGATCCCAATCCAAACTCATTGCACTTGTTCCCACAATGGGTTACCTTCATCAAGGTCACCTTTCTCTCATAACACAAGCTCACAAACACGCCAATCTCGTCGTTGTTTCAATCTACGTTAACCCAGGTCAGTTTTCACCTAATGAAGATCTCTCCACTTACCCTTCTGATTTTCAAGGTGATTTGAAAAAACTTATGAATGTTCCTGGTGGTGTTGATGTTGTTTTTAATCCTAAGAATTTGTATGATTATGGTGAAAGTGATGGTGATGGTGATGATGGTGGTGAAAAGGGTGATGGGGTTGTTTCTTGTGTTGAAAAGAGTGGTTTTGGACATGAGAGTTGGGTGAGAGTTGAGAAGCTTGAAAAGGGTCTTTGTGGAATGAGTAGACCTATTTTCTTTAGAGGGGTTGCTACTATTGTTCGAGATCTTGATTTTTCCATAAAAGTGATAGGTTGTGAAATAACAAGGGAAAATGATGGCCTGGCGATGAGTTCACGCAATGTACATCTTTCACTTGAAGAGAGGGAAAAGGCGCTATCTATAAGCAAATCATTAACAAGAGCAAAGTCAGCGGCAGAAGATGGTCAGGTGGACTGTGAGAAATTGAGGAATTTAGTCATCCAATGTATTACTGAAGCTGGGGGAAGAATTGATTATGCTGAGATTGTTGATCAACAAAGCTTAGAGAAAGTGGAATTTATCAAAGGTCCTGTTGTGTTCTGTGTTGCTGCATTTTTTGGGAAAGTCAGGCTTATAGACAACATGGAAATCAACTTGTAA
Protein sequence

>Msa1105410

MRNWSRTMRSQSKLIALVPTMGYLHQGHLSLITQAHKHANLVVVSIYVNPGQFSPNEDLSTYPSDFQGDLKKLMNVPGGVDVVFNPKNLYDYGESDGDGDDGGEKGDGVVSCVEKSGFGHESWVRVEKLEKGLCGMSRPIFFRGVATIVRDLDFSIKVIGCEITRENDGLAMSSRNVHLSLEEREKALSISKSLTRAKSAAEDGQVDCEKLRNLVIQCITEAGGRIDYAEIVDQQSLEKVEFIKGPVVFCVAAFFGKVRLIDNMEINL*