Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0548150 | KEH29683.1 | 98.034 | 407 | 3 | 1 | 1 | 402 | 1 | 407 | 0.0 | 823 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0548150 | sp|A8MRC7|B3GT2_ARATH | 75.430 | 407 | 95 | 1 | 1 | 402 | 1 | 407 | 0.0 | 664 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0548150 | A0A072UKR4 | 98.034 | 407 | 3 | 1 | 1 | 402 | 1 | 407 | 0.0 | 823 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa0548150 | 0.800629 | 1.317471e-48 | -8.615850e-47 |
Msa0002710 | Msa0548150 | 0.801385 | 9.231888e-49 | -8.615850e-47 |
Msa0007970 | Msa0548150 | 0.802518 | 5.400485e-49 | -8.615850e-47 |
Msa0007990 | Msa0548150 | 0.857793 | 1.281290e-62 | -8.615850e-47 |
Msa0015390 | Msa0548150 | 0.815998 | 6.934764e-52 | -8.615850e-47 |
Msa0017390 | Msa0548150 | 0.818619 | 1.783081e-52 | -8.615850e-47 |
Msa0022550 | Msa0548150 | 0.813370 | 2.649425e-51 | -8.615850e-47 |
Msa0026910 | Msa0548150 | 0.818754 | 1.661821e-52 | -8.615850e-47 |
Msa0027320 | Msa0548150 | 0.806167 | 9.379497e-50 | -8.615850e-47 |
Msa0054820 | Msa0548150 | 0.807391 | 5.173211e-50 | -8.615850e-47 |
Msa0056450 | Msa0548150 | 0.818556 | 1.842702e-52 | -8.615850e-47 |
Msa0064110 | Msa0548150 | 0.801637 | 8.197074e-49 | -8.615850e-47 |
Msa0065680 | Msa0548150 | -0.816079 | 6.653214e-52 | -8.615850e-47 |
Msa0077880 | Msa0548150 | 0.811541 | 6.650319e-51 | -8.615850e-47 |
Msa0079110 | Msa0548150 | 0.821691 | 3.528395e-53 | -8.615850e-47 |
Msa0081650 | Msa0548150 | 0.817754 | 2.798667e-52 | -8.615850e-47 |
Msa0082440 | Msa0548150 | 0.806554 | 7.774710e-50 | -8.615850e-47 |
Msa0087470 | Msa0548150 | 0.801541 | 8.578759e-49 | -8.615850e-47 |
Msa0096480 | Msa0548150 | 0.808002 | 3.835872e-50 | -8.615850e-47 |
Msa0100160 | Msa0548150 | 0.806942 | 6.437535e-50 | -8.615850e-47 |
Msa0103250 | Msa0548150 | 0.830399 | 3.002725e-55 | -8.615850e-47 |
Msa0106620 | Msa0548150 | 0.831474 | 1.635307e-55 | -8.615850e-47 |
Msa0106710 | Msa0548150 | 0.836355 | 9.823964e-57 | -8.615850e-47 |
Msa0118000 | Msa0548150 | 0.816125 | 6.497666e-52 | -8.615850e-47 |
Msa0141400 | Msa0548150 | 0.802121 | 6.521048e-49 | -8.615850e-47 |
Msa0143560 | Msa0548150 | 0.802371 | 5.790651e-49 | -8.615850e-47 |
Msa0144360 | Msa0548150 | 0.806233 | 9.086301e-50 | -8.615850e-47 |
Msa0145190 | Msa0548150 | 0.805991 | 1.021488e-49 | -8.615850e-47 |
Msa0149300 | Msa0548150 | 0.860596 | 1.850582e-63 | -8.615850e-47 |
Msa0171120 | Msa0548150 | 0.806538 | 7.836641e-50 | -8.615850e-47 |
Msa0178510 | Msa0548150 | 0.810038 | 1.406192e-50 | -8.615850e-47 |
Msa0186950 | Msa0548150 | 0.803967 | 2.707166e-49 | -8.615850e-47 |
Msa0187030 | Msa0548150 | 0.810139 | 1.337309e-50 | -8.615850e-47 |
Msa0205010 | Msa0548150 | 0.804550 | 2.046847e-49 | -8.615850e-47 |
Msa0206840 | Msa0548150 | 0.801528 | 8.631216e-49 | -8.615850e-47 |
Msa0207350 | Msa0548150 | 0.840627 | 7.759190e-58 | -8.615850e-47 |
Msa0211150 | Msa0548150 | 0.818024 | 2.432495e-52 | -8.615850e-47 |
Msa0212040 | Msa0548150 | 0.807248 | 5.545232e-50 | -8.615850e-47 |
Msa0212990 | Msa0548150 | 0.801600 | 8.339693e-49 | -8.615850e-47 |
Msa0218350 | Msa0548150 | 0.824718 | 6.934423e-54 | -8.615850e-47 |
Msa0218810 | Msa0548150 | 0.811972 | 5.359190e-51 | -8.615850e-47 |
Msa0225220 | Msa0548150 | 0.816871 | 4.422332e-52 | -8.615850e-47 |
Msa0389910 | Msa0548150 | 0.805727 | 1.161118e-49 | -8.615850e-47 |
Msa0394260 | Msa0548150 | 0.804364 | 2.238425e-49 | -8.615850e-47 |
Msa0397820 | Msa0548150 | 0.814303 | 1.650206e-51 | -8.615850e-47 |
Msa0405130 | Msa0548150 | 0.827710 | 1.345908e-54 | -8.615850e-47 |
Msa0405880 | Msa0548150 | 0.806491 | 8.016075e-50 | -8.615850e-47 |
Msa0413410 | Msa0548150 | 0.802228 | 6.198718e-49 | -8.615850e-47 |
Msa0428050 | Msa0548150 | 0.805510 | 1.289110e-49 | -8.615850e-47 |
Msa0430870 | Msa0548150 | 0.809743 | 1.626928e-50 | -8.615850e-47 |
Msa0450400 | Msa0548150 | -0.812905 | 3.351072e-51 | -8.615850e-47 |
Msa0455740 | Msa0548150 | 0.822069 | 2.885168e-53 | -8.615850e-47 |
Msa0467100 | Msa0548150 | 0.814245 | 1.699571e-51 | -8.615850e-47 |
Msa0468410 | Msa0548150 | 0.821829 | 3.278536e-53 | -8.615850e-47 |
Msa0241140 | Msa0548150 | 0.832541 | 8.912825e-56 | -8.615850e-47 |
Msa0241190 | Msa0548150 | 0.823482 | 1.352513e-53 | -8.615850e-47 |
Msa0254790 | Msa0548150 | 0.803965 | 2.710402e-49 | -8.615850e-47 |
Msa0255550 | Msa0548150 | 0.819612 | 1.060028e-52 | -8.615850e-47 |
Msa0258310 | Msa0548150 | 0.806062 | 9.871199e-50 | -8.615850e-47 |
Msa0285450 | Msa0548150 | 0.810796 | 9.643985e-51 | -8.615850e-47 |
Msa0288080 | Msa0548150 | 0.808942 | 2.416579e-50 | -8.615850e-47 |
Msa0288100 | Msa0548150 | 0.801926 | 7.150543e-49 | -8.615850e-47 |
Msa0300320 | Msa0548150 | 0.813784 | 2.148212e-51 | -8.615850e-47 |
Msa0307310 | Msa0548150 | 0.800541 | 1.373147e-48 | -8.615850e-47 |
Msa0322900 | Msa0548150 | 0.816362 | 5.750151e-52 | -8.615850e-47 |
Msa0326520 | Msa0548150 | 0.803668 | 3.123308e-49 | -8.615850e-47 |
Msa0326590 | Msa0548150 | 0.812851 | 3.442998e-51 | -8.615850e-47 |
Msa0330340 | Msa0548150 | 0.805655 | 1.202127e-49 | -8.615850e-47 |
Msa0342010 | Msa0548150 | 0.824246 | 8.957052e-54 | -8.615850e-47 |
Msa0348530 | Msa0548150 | 0.813718 | 2.220835e-51 | -8.615850e-47 |
Msa0358890 | Msa0548150 | 0.812285 | 4.577656e-51 | -8.615850e-47 |
Msa0485240 | Msa0548150 | 0.801425 | 9.058045e-49 | -8.615850e-47 |
Msa0495330 | Msa0548150 | 0.801962 | 7.029530e-49 | -8.615850e-47 |
Msa0517090 | Msa0548150 | 0.839272 | 1.749658e-57 | -8.615850e-47 |
Msa0518380 | Msa0548150 | 0.809638 | 1.714391e-50 | -8.615850e-47 |
Msa0532980 | Msa0548150 | 0.830693 | 2.543151e-55 | -8.615850e-47 |
Msa0532990 | Msa0548150 | 0.812313 | 4.515026e-51 | -8.615850e-47 |
Msa0548150 | Msa0556010 | 0.803129 | 4.038395e-49 | -8.615850e-47 |
Msa0548150 | Msa0557050 | 0.840390 | 8.948215e-58 | -8.615850e-47 |
Msa0548150 | Msa0560500 | 0.808656 | 2.781855e-50 | -8.615850e-47 |
Msa0548150 | Msa0574390 | 0.807975 | 3.887028e-50 | -8.615850e-47 |
Msa0548150 | Msa0576680 | 0.815868 | 7.412799e-52 | -8.615850e-47 |
Msa0548150 | Msa0581690 | 0.830216 | 3.327506e-55 | -8.615850e-47 |
Msa0548150 | Msa0585230 | 0.814247 | 1.697486e-51 | -8.615850e-47 |
Msa0548150 | Msa0588090 | 0.801942 | 7.097168e-49 | -8.615850e-47 |
Msa0548150 | Msa0595600 | 0.807981 | 3.876412e-50 | -8.615850e-47 |
Msa0548150 | Msa0601950 | 0.801131 | 1.040780e-48 | -8.615850e-47 |
Msa0548150 | Msa0613110 | 0.807853 | 4.126721e-50 | -8.615850e-47 |
Msa0548150 | Msa0613340 | 0.810155 | 1.326487e-50 | -8.615850e-47 |
Msa0548150 | Msa0622650 | 0.812407 | 4.305563e-51 | -8.615850e-47 |
Msa0548150 | Msa0624470 | 0.812124 | 4.964619e-51 | -8.615850e-47 |
Msa0548150 | Msa0628420 | 0.803109 | 4.077346e-49 | -8.615850e-47 |
Msa0548150 | Msa0636020 | 0.807967 | 3.901446e-50 | -8.615850e-47 |
Msa0548150 | Msa0659210 | 0.829071 | 6.320720e-55 | -8.615850e-47 |
Msa0548150 | Msa0661320 | 0.825073 | 5.717445e-54 | -8.615850e-47 |
Msa0548150 | Msa0689760 | 0.803441 | 3.481703e-49 | -8.615850e-47 |
Msa0548150 | Msa0697720 | 0.807408 | 5.128859e-50 | -8.615850e-47 |
Msa0548150 | Msa0703440 | 0.800003 | 1.766751e-48 | -8.615850e-47 |
Msa0548150 | Msa0703780 | 0.816242 | 6.118789e-52 | -8.615850e-47 |
Msa0548150 | Msa0705190 | 0.815515 | 8.888704e-52 | -8.615850e-47 |
Msa0548150 | Msa0710270 | 0.821879 | 3.192569e-53 | -8.615850e-47 |
Msa0548150 | Msa0717890 | 0.804322 | 2.283518e-49 | -8.615850e-47 |
Msa0548150 | Msa0731940 | 0.808842 | 2.538911e-50 | -8.615850e-47 |
Msa0548150 | Msa0753720 | 0.841537 | 4.473511e-58 | -8.615850e-47 |
Msa0548150 | Msa0795070 | 0.801711 | 7.914315e-49 | -8.615850e-47 |
Msa0548150 | Msa0810030 | 0.803689 | 3.092130e-49 | -8.615850e-47 |
Msa0548150 | Msa0817460 | 0.815051 | 1.127060e-51 | -8.615850e-47 |
Msa0548150 | Msa0828920 | 0.800595 | 1.338676e-48 | -8.615850e-47 |
Msa0548150 | Msa0831850 | 0.822475 | 2.322615e-53 | -8.615850e-47 |
Msa0548150 | Msa0832090 | 0.832964 | 6.998435e-56 | -8.615850e-47 |
Msa0548150 | Msa0857220 | 0.836254 | 1.042092e-56 | -8.615850e-47 |
Msa0548150 | Msa0868160 | 0.822494 | 2.299253e-53 | -8.615850e-47 |
Msa0548150 | Msa0875290 | 0.801264 | 9.774554e-49 | -8.615850e-47 |
Msa0548150 | Msa0879080 | 0.815865 | 7.425175e-52 | -8.615850e-47 |
Msa0548150 | Msa0900620 | 0.808039 | 3.766575e-50 | -8.615850e-47 |
Msa0548150 | Msa0903620 | 0.803626 | 3.186554e-49 | -8.615850e-47 |
Msa0548150 | Msa0926470 | 0.807920 | 3.994000e-50 | -8.615850e-47 |
Msa0548150 | Msa0934890 | 0.804255 | 2.358184e-49 | -8.615850e-47 |
Msa0548150 | Msa0936300 | 0.821782 | 3.361462e-53 | -8.615850e-47 |
Msa0548150 | Msa0936390 | 0.802375 | 5.780283e-49 | -8.615850e-47 |
Msa0548150 | Msa0944660 | 0.811963 | 5.383049e-51 | -8.615850e-47 |
Msa0548150 | Msa0960740 | 0.818278 | 2.130712e-52 | -8.615850e-47 |
Msa0548150 | Msa0962840 | 0.808133 | 3.597793e-50 | -8.615850e-47 |
Msa0548150 | Msa0973100 | 0.811336 | 7.369021e-51 | -8.615850e-47 |
Msa0548150 | Msa0980880 | 0.805865 | 1.086048e-49 | -8.615850e-47 |
Msa0548150 | Msa1001390 | 0.848186 | 7.197489e-60 | -8.615850e-47 |
Msa0548150 | Msa1002850 | 0.838511 | 2.754245e-57 | -8.615850e-47 |
Msa0548150 | Msa1010070 | 0.800270 | 1.559093e-48 | -8.615850e-47 |
Msa0548150 | Msa1012590 | -0.800385 | 1.477535e-48 | -8.615850e-47 |
Msa0548150 | Msa1024740 | 0.805959 | 1.037845e-49 | -8.615850e-47 |
Msa0548150 | Msa1026640 | 0.810529 | 1.101498e-50 | -8.615850e-47 |
Msa0548150 | Msa1031930 | 0.805545 | 1.267409e-49 | -8.615850e-47 |
Msa0548150 | Msa1032170 | 0.802170 | 6.369025e-49 | -8.615850e-47 |
Msa0548150 | Msa1034500 | 0.815154 | 1.068913e-51 | -8.615850e-47 |
Msa0548150 | Msa1050910 | 0.824420 | 8.152651e-54 | -8.615850e-47 |
Msa0548150 | Msa1063420 | 0.807952 | 3.931479e-50 | -8.615850e-47 |
Msa0548150 | Msa1080960 | 0.843820 | 1.107318e-58 | -8.615850e-47 |
Msa0548150 | Msa1093260 | 0.805380 | 1.372597e-49 | -8.615850e-47 |
Msa0548150 | Msa1105190 | 0.804203 | 2.418258e-49 | -8.615850e-47 |
Msa0548150 | Msa1105410 | 0.801407 | 9.135798e-49 | -8.615850e-47 |
Msa0548150 | Msa1110090 | 0.827602 | 1.428544e-54 | -8.615850e-47 |
Msa0548150 | Msa1111870 | 0.813502 | 2.478505e-51 | -8.615850e-47 |
Msa0548150 | Msa1115750 | 0.806170 | 9.367606e-50 | -8.615850e-47 |
Msa0548150 | Msa1119990 | 0.807856 | 4.121121e-50 | -8.615850e-47 |
Msa0548150 | Msa1121110 | 0.825544 | 4.423431e-54 | -8.615850e-47 |
Msa0548150 | Msa1121490 | 0.810384 | 1.183932e-50 | -8.615850e-47 |
Msa0548150 | Msa1137570 | 0.851687 | 7.543134e-61 | -8.615850e-47 |
Msa0548150 | Msa1142670 | 0.829707 | 4.427975e-55 | -8.615850e-47 |
Msa0548150 | Msa1186640 | 0.814632 | 1.395377e-51 | -8.615850e-47 |
Msa0548150 | Msa1193290 | 0.808013 | 3.815385e-50 | -8.615850e-47 |
Msa0548150 | Msa1226270 | 0.809975 | 1.450625e-50 | -8.615850e-47 |
Msa0548150 | Msa1238930 | 0.801968 | 7.010807e-49 | -8.615850e-47 |
Msa0548150 | Msa1240510 | 0.844391 | 7.783807e-59 | -8.615850e-47 |
Msa0548150 | Msa1264420 | 0.809515 | 1.821181e-50 | -8.615850e-47 |
Msa0548150 | Msa1275590 | 0.850604 | 1.525073e-60 | -8.615850e-47 |
Msa0548150 | Msa1276660 | 0.803725 | 3.039137e-49 | -8.615850e-47 |
Msa0548150 | Msa1284680 | 0.808850 | 2.528969e-50 | -8.615850e-47 |
Msa0548150 | Msa1286610 | 0.804405 | 2.194637e-49 | -8.615850e-47 |
Msa0548150 | Msa1298370 | 0.819073 | 1.406568e-52 | -8.615850e-47 |
Msa0548150 | Msa1307550 | 0.809370 | 1.956561e-50 | -8.615850e-47 |
Msa0548150 | Msa1308870 | 0.807266 | 5.497845e-50 | -8.615850e-47 |
Msa0548150 | Msa1315750 | 0.814805 | 1.277467e-51 | -8.615850e-47 |
Msa0548150 | Msa1340810 | 0.804205 | 2.415438e-49 | -8.615850e-47 |
Msa0548150 | Msa1353470 | 0.843177 | 1.644669e-58 | -8.615850e-47 |
Msa0548150 | Msa1365600 | 0.812046 | 5.161319e-51 | -8.615850e-47 |
Msa0548150 | Msa1368430 | 0.805518 | 1.284105e-49 | -8.615850e-47 |
Msa0548150 | Msa1372150 | 0.805064 | 1.598671e-49 | -8.615850e-47 |
Msa0548150 | Msa1379590 | 0.800632 | 1.315913e-48 | -8.615850e-47 |
Msa0548150 | Msa1383230 | 0.810241 | 1.271421e-50 | -8.615850e-47 |
Msa0548150 | Msa1384870 | 0.815548 | 8.739778e-52 | -8.615850e-47 |
Msa0548150 | Msa1386710 | 0.800252 | 1.572196e-48 | -8.615850e-47 |
Msa0548150 | Msa1394380 | 0.801869 | 7.346456e-49 | -8.615850e-47 |
Msa0548150 | Msa1408010 | 0.826187 | 3.112289e-54 | -8.615850e-47 |
Msa0548150 | Msa1418260 | 0.803860 | 2.849333e-49 | -8.615850e-47 |
Msa0548150 | Msa1424640 | 0.800702 | 1.273033e-48 | -8.615850e-47 |
Msa0548150 | Msa1439610 | 0.819426 | 1.168917e-52 | -8.615850e-47 |
Msa0548150 | Msa1463900 | 0.811828 | 5.759426e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0548150 | MtrunA17_Chr4g0024631 | 98.034 | 407 | 3 | 1 | 1 | 402 | 1 | 407 | 0.0 | 823 |
Msa0548150 | MtrunA17_Chr2g0322591 | 78.818 | 406 | 78 | 2 | 1 | 402 | 1 | 402 | 0.0 | 670 |
Msa0548150 | MtrunA17_Chr3g0115251 | 62.183 | 394 | 135 | 4 | 15 | 402 | 9 | 394 | 4.08e-180 | 506 |
Msa0548150 | MtrunA17_Chr4g0004991 | 71.479 | 284 | 76 | 1 | 124 | 402 | 11 | 294 | 3.88e-158 | 447 |
Msa0548150 | MtrunA17_Chr4g0017871 | 63.415 | 246 | 85 | 1 | 162 | 402 | 4 | 249 | 3.22e-123 | 356 |
Msa0548150 | MtrunA17_Chr5g0396961 | 46.863 | 271 | 134 | 4 | 98 | 367 | 80 | 341 | 1.31e-80 | 251 |
Msa0548150 | MtrunA17_Chr3g0126221 | 48.327 | 269 | 129 | 5 | 98 | 365 | 80 | 339 | 8.08e-79 | 246 |
Msa0548150 | MtrunA17_Chr1g0149521 | 44.015 | 259 | 134 | 5 | 96 | 353 | 85 | 333 | 1.26e-66 | 215 |
Msa0548150 | MtrunA17_Chr8g0360581 | 35.632 | 261 | 156 | 6 | 132 | 389 | 77 | 328 | 3.41e-50 | 172 |
Msa0548150 | MtrunA17_Chr2g0316241 | 35.798 | 257 | 153 | 6 | 135 | 388 | 74 | 321 | 1.74e-49 | 170 |
Msa0548150 | MtrunA17_Chr4g0017861 | 36.601 | 153 | 76 | 5 | 16 | 165 | 17 | 151 | 1.77e-20 | 88.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0548150 | AT1G05170.2 | 75.430 | 407 | 95 | 1 | 1 | 402 | 1 | 407 | 0.0 | 664 |
Msa0548150 | AT2G32430.1 | 73.350 | 409 | 102 | 3 | 1 | 402 | 1 | 409 | 0.0 | 619 |
Msa0548150 | AT4G26940.1 | 71.788 | 397 | 105 | 2 | 10 | 402 | 14 | 407 | 0.0 | 590 |
Msa0548150 | AT1G05170.1 | 73.938 | 353 | 92 | 0 | 1 | 353 | 1 | 353 | 0.0 | 573 |
Msa0548150 | AT1G11730.1 | 59.658 | 409 | 131 | 6 | 1 | 401 | 1 | 383 | 7.28e-180 | 506 |
Msa0548150 | AT1G32930.1 | 59.057 | 403 | 151 | 5 | 6 | 402 | 5 | 399 | 1.58e-173 | 490 |
Msa0548150 | AT1G77810.2 | 58.438 | 397 | 136 | 6 | 11 | 399 | 6 | 381 | 1.08e-167 | 475 |
Msa0548150 | AT1G77810.1 | 58.000 | 400 | 136 | 7 | 11 | 399 | 6 | 384 | 1.96e-165 | 469 |
Msa0548150 | AT1G33430.1 | 57.576 | 396 | 150 | 7 | 16 | 402 | 7 | 393 | 7.96e-155 | 442 |
Msa0548150 | AT1G33430.2 | 56.436 | 404 | 150 | 8 | 16 | 402 | 7 | 401 | 1.70e-151 | 434 |
Msa0548150 | AT1G22015.1 | 52.381 | 399 | 165 | 5 | 15 | 402 | 11 | 395 | 1.32e-146 | 422 |
Msa0548150 | AT4G26940.2 | 66.052 | 271 | 89 | 1 | 10 | 280 | 14 | 281 | 3.38e-124 | 361 |
Msa0548150 | AT1G33430.3 | 56.913 | 311 | 121 | 6 | 16 | 322 | 7 | 308 | 7.74e-111 | 327 |
Msa0548150 | AT5G53340.1 | 46.097 | 269 | 135 | 5 | 98 | 365 | 76 | 335 | 3.03e-78 | 245 |
Msa0548150 | AT5G53340.2 | 46.360 | 261 | 132 | 4 | 98 | 357 | 76 | 329 | 3.36e-77 | 243 |
Msa0548150 | AT4G32120.1 | 45.946 | 259 | 128 | 6 | 96 | 353 | 85 | 332 | 1.21e-68 | 221 |
Msa0548150 | AT2G25300.2 | 43.629 | 259 | 134 | 5 | 96 | 353 | 8 | 255 | 2.89e-67 | 214 |
Msa0548150 | AT2G25300.1 | 44.094 | 254 | 128 | 5 | 101 | 353 | 93 | 333 | 3.79e-66 | 214 |
Msa0548150 | AT2G26100.1 | 37.066 | 259 | 147 | 7 | 135 | 388 | 107 | 354 | 3.87e-51 | 176 |
Msa0548150 | AT3G14960.1 | 33.984 | 256 | 157 | 6 | 135 | 387 | 81 | 327 | 4.72e-48 | 167 |
Msa0548150 | AT1G53290.1 | 34.884 | 258 | 156 | 6 | 135 | 389 | 83 | 331 | 4.80e-48 | 167 |
Msa0548150 | AT2G26100.2 | 37.662 | 231 | 135 | 5 | 135 | 361 | 107 | 332 | 3.32e-46 | 162 |
Find 132 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCAGGCTTTGTTTCTTTC+TGG | 0.057126 | 4_1:-41878729 | None:intergenic |
CCTAATAAATTGATATAATT+TGG | 0.146827 | 4_1:+41879010 | Msa0548150:three_prime_UTR |
CCAAATTATATCAATTTATT+AGG | 0.169156 | 4_1:-41879010 | None:intergenic |
TCAATAGGAGCTTGGTTTAT+TGG | 0.210268 | 4_1:+41878065 | Msa0548150:CDS |
TTGCCACTGCTGTGACCTTA+TGG | 0.254042 | 4_1:+41877325 | Msa0548150:CDS |
ACACATAAATAATCAATTAT+TGG | 0.257213 | 4_1:-41879057 | None:intergenic |
GTGTAGCTTGTTTGCAAGTA+TGG | 0.265759 | 4_1:-41874569 | None:intergenic |
CATTGGAAGTTTGGCGAGTC+TGG | 0.279395 | 4_1:+41877830 | Msa0548150:CDS |
ACTTCAATATGCAAAATAAC+TGG | 0.284348 | 4_1:-41874774 | None:intergenic |
TTCTTCTCATCTCAAGAATA+AGG | 0.285493 | 4_1:+41874725 | Msa0548150:five_prime_UTR |
GTATGCTATTTCCAATGATT+TGG | 0.294141 | 4_1:+41877886 | Msa0548150:CDS |
TTTATGGAGTGCTTCTTTCT+AGG | 0.298948 | 4_1:+41878657 | Msa0548150:CDS |
GAGAAGGTGAAAATGCTTTA+TGG | 0.301896 | 4_1:+41878641 | Msa0548150:CDS |
GAACCCGAGCATTGGAAGTT+TGG | 0.312071 | 4_1:+41877821 | Msa0548150:CDS |
TCCAATTTAGTTACAAGATC+TGG | 0.320538 | 4_1:+41876118 | Msa0548150:intron |
GGAACTATTAACAAACAAAA+TGG | 0.326167 | 4_1:-41878968 | None:intergenic |
TGGAGTATTCCTGAACAAAA+TGG | 0.340829 | 4_1:+41875924 | Msa0548150:CDS |
GAAGTGTAATATCTCAGAAA+TGG | 0.343150 | 4_1:+41874880 | Msa0548150:CDS |
ATTGTCATGCGCTTTGTAAT+TGG | 0.344864 | 4_1:+41876661 | Msa0548150:CDS |
ACTTCCAATGCTCGGGTTCA+TGG | 0.351453 | 4_1:-41877817 | None:intergenic |
TGCCACTGCTGTGACCTTAT+GGG | 0.354535 | 4_1:+41877326 | Msa0548150:CDS |
CTCCTGTTTCAGAAGATATA+AGG | 0.357539 | 4_1:+41876380 | Msa0548150:CDS |
CTGGAATGCTCTTCACTAAC+AGG | 0.360031 | 4_1:+41874934 | Msa0548150:CDS |
TTGTCTTTGCTGACAATTCA+AGG | 0.362315 | 4_1:-41877293 | None:intergenic |
TTTGTGTTGCTTCATTTGAT+TGG | 0.363073 | 4_1:+41878560 | Msa0548150:CDS |
GAAAAGAAGGGACTCGGTTC+GGG | 0.366676 | 4_1:+41876471 | Msa0548150:CDS |
GGTAATAATCTTCCTGAGTT+AGG | 0.368466 | 4_1:-41878703 | None:intergenic |
AAGAAGCTAGAGGAAGAAAA+AGG | 0.375991 | 4_1:+41876637 | Msa0548150:CDS |
ATATTTCTCTCTATATATAC+TGG | 0.381326 | 4_1:-41878786 | None:intergenic |
TACATTGGATGCATGAAATC+TGG | 0.384729 | 4_1:+41877685 | Msa0548150:CDS |
GTCCTTATATCTTCTGAAAC+AGG | 0.385267 | 4_1:-41876382 | None:intergenic |
GGAAAAGAAGGGACTCGGTT+CGG | 0.389458 | 4_1:+41876470 | Msa0548150:CDS |
AGACCGACAGCTTCAGAAAC+TGG | 0.394152 | 4_1:+41875954 | Msa0548150:CDS |
TATGTATGTTGCCAAATCAT+TGG | 0.411417 | 4_1:-41877897 | None:intergenic |
GACGATGTTCATGTAAATAT+AGG | 0.415818 | 4_1:+41877375 | Msa0548150:CDS |
TATTATTAAAACACTAATAG+TGG | 0.418810 | 4_1:-41874646 | None:intergenic |
TCTATTCTTTGTTGCTTGAA+AGG | 0.423223 | 4_1:+41878944 | Msa0548150:three_prime_UTR |
CTGCTTCAATAGCTCTATCT+AGG | 0.425000 | 4_1:-41877053 | None:intergenic |
CTATTCTTTGTTGCTTGAAA+GGG | 0.429201 | 4_1:+41878945 | Msa0548150:three_prime_UTR |
CTATGTGAGTTGTGTTGTGT+TGG | 0.439564 | 4_1:-41874594 | None:intergenic |
GTACATAGAAGGTGTGGAGA+AGG | 0.442264 | 4_1:+41878625 | Msa0548150:CDS |
GGAGCTGCAGTGGAATTTGT+AGG | 0.445573 | 4_1:+41878581 | Msa0548150:CDS |
TATGTATGGTGAAGATTTCA+AGG | 0.447691 | 4_1:+41876163 | Msa0548150:CDS |
ATCTCTTCTTAAAATGTAGA+AGG | 0.449785 | 4_1:-41878871 | None:intergenic |
TTAATACTGCCTTTAGCAGC+AGG | 0.450178 | 4_1:+41876449 | Msa0548150:CDS |
TTTATGCAGAATCATGTTGA+AGG | 0.456059 | 4_1:+41877267 | Msa0548150:intron |
TCCTATTGACACATCCTCAT+TGG | 0.456204 | 4_1:-41878051 | None:intergenic |
AATAATCAATTATTGGCAAA+AGG | 0.465631 | 4_1:-41879050 | None:intergenic |
TACTTTGTTGCAGAGGGGTA+AGG | 0.467767 | 4_1:+41877792 | Msa0548150:intron |
GGATTAAAGAAGTACATAGA+AGG | 0.469286 | 4_1:+41878614 | Msa0548150:CDS |
GAATTTGTAGGTCCGCTGAT+AGG | 0.469957 | 4_1:+41878593 | Msa0548150:CDS |
CTCGCCAAACTTCCAATGCT+CGG | 0.470366 | 4_1:-41877825 | None:intergenic |
CCTTTAGCAGCAGGAAAAGA+AGG | 0.471407 | 4_1:+41876458 | Msa0548150:CDS |
AAGTGTAATATCTCAGAAAT+GGG | 0.475589 | 4_1:+41874881 | Msa0548150:CDS |
AGAATGAAGAAAGAAGAGAA+TGG | 0.475983 | 4_1:-41874693 | None:intergenic |
GGGCAAGAGAAAGTACCTTA+TGG | 0.476193 | 4_1:+41876417 | Msa0548150:CDS |
CTGTATTGAATGTAGAGCTT+TGG | 0.481497 | 4_1:+41876285 | Msa0548150:intron |
GAATGAAGAAAGAAGAGAAT+GGG | 0.482276 | 4_1:-41874692 | None:intergenic |
TCATGGTTTGCAGCTAGATA+AGG | 0.483793 | 4_1:+41878897 | Msa0548150:three_prime_UTR |
TATGTGAGTTGTGTTGTGTT+GGG | 0.485451 | 4_1:-41874593 | None:intergenic |
GGCTTTGTTTCTTTCTGGAG+TGG | 0.486213 | 4_1:-41878724 | None:intergenic |
GCTTGTTTGCAAGTATGGTA+AGG | 0.487081 | 4_1:-41874564 | None:intergenic |
ATAATTGATTATTTATGTGT+TGG | 0.487550 | 4_1:+41879060 | Msa0548150:three_prime_UTR |
GCATGGAGATTTCTTGAGGC+TGG | 0.488147 | 4_1:+41877086 | Msa0548150:CDS |
TGTCTCGGTAGTTTCTGTGC+TGG | 0.488168 | 4_1:+41874915 | Msa0548150:CDS |
TTGTTTGTTAATAGTTCCAA+TGG | 0.493333 | 4_1:+41878973 | Msa0548150:three_prime_UTR |
CTTAAAATGTAGAAGGTCCA+TGG | 0.495200 | 4_1:-41878864 | None:intergenic |
GCCAATGAGGATGTGTCAAT+AGG | 0.497688 | 4_1:+41878050 | Msa0548150:CDS |
TTCAAATTTAGAGATGGACT+TGG | 0.502922 | 4_1:+41876318 | Msa0548150:CDS |
AATAAATTGATATAATTTGG+TGG | 0.503156 | 4_1:+41879013 | Msa0548150:three_prime_UTR |
TCGCCAAACTTCCAATGCTC+GGG | 0.504026 | 4_1:-41877824 | None:intergenic |
GGAGCTTGATAGCTAGCCAT+TGG | 0.506135 | 4_1:-41878989 | None:intergenic |
GGGACTCGGTTCGGGCTACC+TGG | 0.512421 | 4_1:+41876479 | Msa0548150:CDS |
TATTAATACCTACGACCATA+AGG | 0.514517 | 4_1:-41876432 | None:intergenic |
GATGGACTTGGCTGCTGCGA+GGG | 0.515443 | 4_1:+41876330 | Msa0548150:CDS |
AAGTACTTCCGCCATGCCAC+AGG | 0.515451 | 4_1:+41877857 | Msa0548150:CDS |
TGTATCTTAGTAATTCCCCT+AGG | 0.517860 | 4_1:+41879116 | Msa0548150:three_prime_UTR |
GACTATTTCAAATTTAGAGA+TGG | 0.518519 | 4_1:+41876312 | Msa0548150:CDS |
TGCGAATGGAAGGCGCAAGC+AGG | 0.529852 | 4_1:+41878532 | Msa0548150:CDS |
GGTTTCAGATTGCGAATGGA+AGG | 0.531340 | 4_1:+41878522 | Msa0548150:intron |
GTATCTTAGTAATTCCCCTA+GGG | 0.535039 | 4_1:+41879117 | Msa0548150:three_prime_UTR |
TCAATTATTGGCAAAAGGAA+AGG | 0.536443 | 4_1:-41879045 | None:intergenic |
CAGCAGGAAAAGAAGGGACT+CGG | 0.538952 | 4_1:+41876465 | Msa0548150:CDS |
TATAAGGACGACTGAGTCGA+CGG | 0.542612 | 4_1:+41876396 | Msa0548150:CDS |
TGATGAGTTCTTCCTAACTC+AGG | 0.542722 | 4_1:+41878691 | Msa0548150:three_prime_UTR |
TCATTTGATTGGAGCTGCAG+TGG | 0.544715 | 4_1:+41878571 | Msa0548150:CDS |
GGTACCATGAACCCGAGCAT+TGG | 0.545810 | 4_1:+41877813 | Msa0548150:CDS |
TCAAAACAACGGATATACAT+TGG | 0.552136 | 4_1:+41877670 | Msa0548150:CDS |
CTTCAATATGCAAAATAACT+GGG | 0.553629 | 4_1:-41874773 | None:intergenic |
GTTTGGTTTCAGATTGCGAA+TGG | 0.555425 | 4_1:+41878518 | Msa0548150:intron |
CGGGCTACCTGGTTGCCACA+AGG | 0.556849 | 4_1:+41876490 | Msa0548150:CDS |
AGGATGTGTCAATAGGAGCT+TGG | 0.557584 | 4_1:+41878057 | Msa0548150:CDS |
CATTGGGAGAAACTCTCGTT+AGG | 0.559599 | 4_1:+41877641 | Msa0548150:CDS |
CGCGAAACTAGAGATATGTA+TGG | 0.560067 | 4_1:+41876149 | Msa0548150:CDS |
CTTGTTTGCAAGTATGGTAA+GGG | 0.569379 | 4_1:-41874563 | None:intergenic |
TTACCAGTTTCTGAAGCTGT+CGG | 0.571354 | 4_1:-41875957 | None:intergenic |
AGTTACAAGATCTGGAAATG+AGG | 0.572395 | 4_1:+41876126 | Msa0548150:intron |
ATAGCATAAGATATAAGCTA+AGG | 0.576272 | 4_1:+41874617 | Msa0548150:five_prime_UTR |
TAAATTGAATGTAGTTTCCG+AGG | 0.576758 | 4_1:+41875977 | Msa0548150:CDS |
AAGAGAGAATGCTTGCTCCA+TGG | 0.578870 | 4_1:+41878847 | Msa0548150:three_prime_UTR |
AGATAGAGCTATTGAAGCAG+AGG | 0.580020 | 4_1:+41877056 | Msa0548150:CDS |
TTATGAACCTTGTGGCAACC+AGG | 0.580745 | 4_1:-41876497 | None:intergenic |
CATACAACTGCCCTGTGGCA+TGG | 0.582197 | 4_1:-41877868 | None:intergenic |
TTAATGACGTGGAAAAGTAG+AGG | 0.584574 | 4_1:+41874843 | Msa0548150:exon |
CTTTAGCAGCAGGAAAAGAA+GGG | 0.584908 | 4_1:+41876459 | Msa0548150:CDS |
AAAGAAGTACATAGAAGGTG+TGG | 0.587665 | 4_1:+41878619 | Msa0548150:CDS |
GAAGCAGAGGACAGAAAGCA+TGG | 0.588213 | 4_1:+41877069 | Msa0548150:CDS |
TACTTCTTTAATCCTATCAG+CGG | 0.588432 | 4_1:-41878605 | None:intergenic |
GCAAGTATGGTAAGGGACGT+TGG | 0.590601 | 4_1:-41874556 | None:intergenic |
AAATTGAATGTAGTTTCCGA+GGG | 0.596196 | 4_1:+41875978 | Msa0548150:CDS |
AGTTAGGAAGAACTCATCAA+AGG | 0.596741 | 4_1:-41878687 | None:intergenic |
TTAACTAGTGCTACATCAGG+AGG | 0.603990 | 4_1:+41877027 | Msa0548150:intron |
GATCAGAAGTGTCAATGCTA+CGG | 0.605562 | 4_1:-41879184 | None:intergenic |
AGAAAGTACCTTATGGTCGT+AGG | 0.607267 | 4_1:+41876424 | Msa0548150:CDS |
ATCCCATAAGGTCACAGCAG+TGG | 0.610258 | 4_1:-41877328 | None:intergenic |
GAAAGCATGGAGATTTCTTG+AGG | 0.614966 | 4_1:+41877082 | Msa0548150:CDS |
TTGGTTTATTGGACTTGACG+TGG | 0.621784 | 4_1:+41878076 | Msa0548150:CDS |
AGATGGACTTGGCTGCTGCG+AGG | 0.622009 | 4_1:+41876329 | Msa0548150:CDS |
TGCGCTTTGTAATTGGACAC+AGG | 0.622431 | 4_1:+41876668 | Msa0548150:CDS |
AGAATGGGTTGAGAAGAAGA+TGG | 0.627446 | 4_1:-41874677 | None:intergenic |
ATAAGGACGACTGAGTCGAC+GGG | 0.634555 | 4_1:+41876397 | Msa0548150:CDS |
TCTTCATAAGTATGCCAATG+AGG | 0.641650 | 4_1:+41878037 | Msa0548150:CDS |
ATGTATGGTGAAGATTTCAA+GGG | 0.663955 | 4_1:+41876164 | Msa0548150:CDS |
AAATTGTTACGAAGTAGAGT+CGG | 0.664201 | 4_1:-41879150 | None:intergenic |
AGTACTTCCGCCATGCCACA+GGG | 0.672475 | 4_1:+41877858 | Msa0548150:CDS |
ATGGGTTGAGAAGAAGATGG+TGG | 0.676621 | 4_1:-41874674 | None:intergenic |
GTTCAAGAGTCAGTACGAAG+TGG | 0.682952 | 4_1:+41876355 | Msa0548150:CDS |
GGACAAAAGAAAGAAGCTAG+AGG | 0.691737 | 4_1:+41876627 | Msa0548150:CDS |
TATCTTAGTAATTCCCCTAG+GGG | 0.695288 | 4_1:+41879118 | Msa0548150:three_prime_UTR |
ACAACTGCCCTGTGGCATGG+CGG | 0.712956 | 4_1:-41877865 | None:intergenic |
TTAGGCATCGATCAAAACAA+CGG | 0.738736 | 4_1:+41877659 | Msa0548150:CDS |
AATAGCATACAACTGCCCTG+TGG | 0.772018 | 4_1:-41877873 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAAGTAAAACTTTTTTAA+TGG | + | chr4_1:41875705-41875724 | Msa0548150:intron | 10.0% |
!! | CATAGAAAAATAATAATAAT+TGG | - | chr4_1:41876246-41876265 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTGAAGAA+TGG | + | chr4_1:41876927-41876946 | Msa0548150:intron | 10.0% |
!!! | ATACATATTTTTTTAAAAAC+CGG | - | chr4_1:41877241-41877260 | None:intergenic | 10.0% |
!! | ATTTACATTATTATATTGTT+GGG | - | chr4_1:41877487-41877506 | None:intergenic | 10.0% |
!! | TATTTACATTATTATATTGT+TGG | - | chr4_1:41877488-41877507 | None:intergenic | 10.0% |
!! | TATTATTAAAACACTAATAG+TGG | - | chr4_1:41874649-41874668 | None:intergenic | 15.0% |
!!! | AATTAGTGATTTTTTTTTTG+AGG | + | chr4_1:41875018-41875037 | Msa0548150:intron | 15.0% |
!!! | ATTAGTGATTTTTTTTTTGA+GGG | + | chr4_1:41875019-41875038 | Msa0548150:intron | 15.0% |
!! | TAATTACTGTTTATGTTAAT+TGG | + | chr4_1:41875311-41875330 | Msa0548150:intron | 15.0% |
!!! | TTTTTAAAGAAAAGCTTTTA+AGG | - | chr4_1:41875393-41875412 | None:intergenic | 15.0% |
!!! | AAAGCTTTTCTTTAAAAAAT+TGG | + | chr4_1:41875395-41875414 | Msa0548150:intron | 15.0% |
!!! | AAGCTTTTCTTTAAAAAATT+GGG | + | chr4_1:41875396-41875415 | Msa0548150:intron | 15.0% |
!!! | TTTTTTTTTTTTATCAAGCA+AGG | - | chr4_1:41876040-41876059 | None:intergenic | 15.0% |
!!! | AATTTATTCTTTTATGTAGT+AGG | - | chr4_1:41877940-41877959 | None:intergenic | 15.0% |
!! | CCAAATTATATCAATTTATT+AGG | - | chr4_1:41879013-41879032 | None:intergenic | 15.0% |
!! | CCTAATAAATTGATATAATT+TGG | + | chr4_1:41879010-41879029 | Msa0548150:three_prime_UTR | 15.0% |
!! | AATAAATTGATATAATTTGG+TGG | + | chr4_1:41879013-41879032 | Msa0548150:three_prime_UTR | 15.0% |
!! | ACACATAAATAATCAATTAT+TGG | - | chr4_1:41879060-41879079 | None:intergenic | 15.0% |
!! | ATAATTGATTATTTATGTGT+TGG | + | chr4_1:41879060-41879079 | Msa0548150:three_prime_UTR | 15.0% |
!! | TAAAAAAAGAATTAATGACG+TGG | + | chr4_1:41874832-41874851 | Msa0548150:exon | 20.0% |
!!! | TTCTTTAAAAAATTGGGAAA+AGG | + | chr4_1:41875402-41875421 | Msa0548150:intron | 20.0% |
!!! | TCTTTAAAAAATTGGGAAAA+GGG | + | chr4_1:41875403-41875422 | Msa0548150:intron | 20.0% |
!! | ATAACTGAAATTCATTTCTA+AGG | - | chr4_1:41875534-41875553 | None:intergenic | 20.0% |
!! | TATATGTATCATTTAGTAGT+AGG | + | chr4_1:41875664-41875683 | Msa0548150:intron | 20.0% |
!! | TAACTATTGAACATATTGTT+TGG | + | chr4_1:41875836-41875855 | Msa0548150:intron | 20.0% |
!! | AACTATTGAACATATTGTTT+GGG | + | chr4_1:41875837-41875856 | Msa0548150:intron | 20.0% |
!! | AGAAATGTTAATATCATAAC+AGG | + | chr4_1:41875898-41875917 | Msa0548150:intron | 20.0% |
!!! | GATTTTTTCTTTTGATAACA+TGG | + | chr4_1:41876596-41876615 | Msa0548150:intron | 20.0% |
!!! | TTTTGATAACATGGATAATA+GGG | + | chr4_1:41876605-41876624 | Msa0548150:intron | 20.0% |
!! | TAATCATAACTCAACTATAT+CGG | + | chr4_1:41876892-41876911 | Msa0548150:intron | 20.0% |
!! | GAAATAGTAATGAAACAAAA+AGG | - | chr4_1:41877128-41877147 | None:intergenic | 20.0% |
!! | AAATACTTTCTATTGTGAAT+TGG | + | chr4_1:41877731-41877750 | Msa0548150:intron | 20.0% |
!! | AATACTTTCTATTGTGAATT+GGG | + | chr4_1:41877732-41877751 | Msa0548150:intron | 20.0% |
!! | ATTAAACATAACCAAATCAA+TGG | + | chr4_1:41877960-41877979 | Msa0548150:intron | 20.0% |
!! | TTAAATTGTTTATCCAAACA+TGG | + | chr4_1:41878418-41878437 | Msa0548150:intron | 20.0% |
!!! | CAATAATTTGAAAGTGTTAA+CGG | - | chr4_1:41878493-41878512 | None:intergenic | 20.0% |
!! | GTTAACACTTTCAAATTATT+GGG | + | chr4_1:41878492-41878511 | Msa0548150:intron | 20.0% |
!! | TGGACAAAAATATATAGAAA+AGG | - | chr4_1:41878769-41878788 | None:intergenic | 20.0% |
!! | ATATTTCTCTCTATATATAC+TGG | - | chr4_1:41878789-41878808 | None:intergenic | 20.0% |
!! | AATAATCAATTATTGGCAAA+AGG | - | chr4_1:41879053-41879072 | None:intergenic | 20.0% |
! | ATAGCATAAGATATAAGCTA+AGG | + | chr4_1:41874617-41874636 | Msa0548150:five_prime_UTR | 25.0% |
! | CTTCAATATGCAAAATAACT+GGG | - | chr4_1:41874776-41874795 | None:intergenic | 25.0% |
! | ACTTCAATATGCAAAATAAC+TGG | - | chr4_1:41874777-41874796 | None:intergenic | 25.0% |
! | AAGTGTAATATCTCAGAAAT+GGG | + | chr4_1:41874881-41874900 | Msa0548150:CDS | 25.0% |
!! | CTTATGTATTATGGATTAAG+TGG | + | chr4_1:41875103-41875122 | Msa0548150:intron | 25.0% |
!! | CTTTAAAAAATTGGGAAAAG+GGG | + | chr4_1:41875404-41875423 | Msa0548150:intron | 25.0% |
! | TTAGTAGTAGGTATAATTCT+TGG | + | chr4_1:41875676-41875695 | Msa0548150:intron | 25.0% |
! | AGTGTAAAAAATCTTTACAC+CGG | + | chr4_1:41875751-41875770 | Msa0548150:intron | 25.0% |
! | ACTATTGAACATATTGTTTG+GGG | + | chr4_1:41875838-41875857 | Msa0548150:intron | 25.0% |
! | GTTAATATCATAACAGGATA+TGG | + | chr4_1:41875904-41875923 | Msa0548150:intron | 25.0% |
! | GACTATTTCAAATTTAGAGA+TGG | + | chr4_1:41876312-41876331 | Msa0548150:CDS | 25.0% |
! | AGAAGAAGATATTAGGAAAT+GGG | - | chr4_1:41876529-41876548 | None:intergenic | 25.0% |
!!! | CTTTTGATAACATGGATAAT+AGG | + | chr4_1:41876604-41876623 | Msa0548150:intron | 25.0% |
!! | TTTGATAACATGGATAATAG+GGG | + | chr4_1:41876606-41876625 | Msa0548150:intron | 25.0% |
!! | CAACAATTTTGTTGCATAAT+TGG | + | chr4_1:41876711-41876730 | Msa0548150:intron | 25.0% |
!!! | GCATAATTTGTTTTGAAGAA+TGG | + | chr4_1:41876965-41876984 | Msa0548150:intron | 25.0% |
! | GTCAAGTAAAACATGAAAAA+GGG | - | chr4_1:41877163-41877182 | None:intergenic | 25.0% |
! | TGTCAAGTAAAACATGAAAA+AGG | - | chr4_1:41877164-41877183 | None:intergenic | 25.0% |
! | GAAAAATTGAAAAATACCAC+CGG | + | chr4_1:41877219-41877238 | Msa0548150:intron | 25.0% |
!!! | CATATTTTTTTAAAAACCGG+TGG | - | chr4_1:41877238-41877257 | None:intergenic | 25.0% |
!!! | TCAATATTTTTCAGCAACAT+TGG | + | chr4_1:41877624-41877643 | Msa0548150:intron | 25.0% |
!!! | CAATATTTTTCAGCAACATT+GGG | + | chr4_1:41877625-41877644 | Msa0548150:intron | 25.0% |
! | ATACTTTCTATTGTGAATTG+GGG | + | chr4_1:41877733-41877752 | Msa0548150:intron | 25.0% |
! | ATACATATCTATAAACCAGT+AGG | + | chr4_1:41877913-41877932 | Msa0548150:intron | 25.0% |
! | GCTTATTTGAGCTTATTTAT+TGG | + | chr4_1:41878208-41878227 | Msa0548150:intron | 25.0% |
! | GAATCATATCATTATCTGTT+TGG | + | chr4_1:41878448-41878467 | Msa0548150:intron | 25.0% |
! | CGTTAACACTTTCAAATTAT+TGG | + | chr4_1:41878491-41878510 | Msa0548150:intron | 25.0% |
! | ATCTCTTCTTAAAATGTAGA+AGG | - | chr4_1:41878874-41878893 | None:intergenic | 25.0% |
!!! | TTTTAAGAAGAGATTGTTCA+TGG | + | chr4_1:41878880-41878899 | Msa0548150:three_prime_UTR | 25.0% |
! | GGAACTATTAACAAACAAAA+TGG | - | chr4_1:41878971-41878990 | None:intergenic | 25.0% |
!! | TTGTTTGTTAATAGTTCCAA+TGG | + | chr4_1:41878973-41878992 | Msa0548150:three_prime_UTR | 25.0% |
GAATGAAGAAAGAAGAGAAT+GGG | - | chr4_1:41874695-41874714 | None:intergenic | 30.0% | |
AGAATGAAGAAAGAAGAGAA+TGG | - | chr4_1:41874696-41874715 | None:intergenic | 30.0% | |
TTCTTCTCATCTCAAGAATA+AGG | + | chr4_1:41874725-41874744 | Msa0548150:five_prime_UTR | 30.0% | |
GAAGTGTAATATCTCAGAAA+TGG | + | chr4_1:41874880-41874899 | Msa0548150:CDS | 30.0% | |
CTCATAAAACAGAGAAAACA+GGG | - | chr4_1:41874972-41874991 | None:intergenic | 30.0% | |
TCTCATAAAACAGAGAAAAC+AGG | - | chr4_1:41874973-41874992 | None:intergenic | 30.0% | |
! | CTGTTTTATGAGACTTTGTT+TGG | + | chr4_1:41874980-41874999 | Msa0548150:intron | 30.0% |
! | GCTATTTCGCTTATGTATTA+TGG | + | chr4_1:41875094-41875113 | Msa0548150:intron | 30.0% |
GATTAAGTGGAATTAGATCT+GGG | + | chr4_1:41875116-41875135 | Msa0548150:intron | 30.0% | |
TAAATTGAATGTAGTTTCCG+AGG | + | chr4_1:41875977-41875996 | Msa0548150:CDS | 30.0% | |
AAATTGAATGTAGTTTCCGA+GGG | + | chr4_1:41875978-41875997 | Msa0548150:CDS | 30.0% | |
! | AATTTTCGAATTACAACCCT+CGG | - | chr4_1:41875997-41876016 | None:intergenic | 30.0% |
AGATCTTGTAACTAAATTGG+AGG | - | chr4_1:41876119-41876138 | None:intergenic | 30.0% | |
TCCAATTTAGTTACAAGATC+TGG | + | chr4_1:41876118-41876137 | Msa0548150:intron | 30.0% | |
TCCAGATCTTGTAACTAAAT+TGG | - | chr4_1:41876122-41876141 | None:intergenic | 30.0% | |
TATGTATGGTGAAGATTTCA+AGG | + | chr4_1:41876163-41876182 | Msa0548150:CDS | 30.0% | |
ATGTATGGTGAAGATTTCAA+GGG | + | chr4_1:41876164-41876183 | Msa0548150:CDS | 30.0% | |
ACTGCATATAACTTACTGTT+TGG | - | chr4_1:41876198-41876217 | None:intergenic | 30.0% | |
AAACAGTAAGTTATATGCAG+TGG | + | chr4_1:41876197-41876216 | Msa0548150:intron | 30.0% | |
! | TTCAAATTTAGAGATGGACT+TGG | + | chr4_1:41876318-41876337 | Msa0548150:CDS | 30.0% |
TATTAATACCTACGACCATA+AGG | - | chr4_1:41876435-41876454 | None:intergenic | 30.0% | |
GGATAAAATTATGAACCTTG+TGG | - | chr4_1:41876508-41876527 | None:intergenic | 30.0% | |
GAGAAGAAGATATTAGGAAA+TGG | - | chr4_1:41876530-41876549 | None:intergenic | 30.0% | |
TTTCCTAATATCTTCTTCTC+TGG | + | chr4_1:41876530-41876549 | Msa0548150:intron | 30.0% | |
AAACCAGAGAAGAAGATATT+AGG | - | chr4_1:41876536-41876555 | None:intergenic | 30.0% | |
!! | AGTGTAGTCATTTTGAATTC+GGG | - | chr4_1:41876764-41876783 | None:intergenic | 30.0% |
!! | CAGTGTAGTCATTTTGAATT+CGG | - | chr4_1:41876765-41876784 | None:intergenic | 30.0% |
TAAAATACAGCTCTATGACA+TGG | - | chr4_1:41876797-41876816 | None:intergenic | 30.0% | |
GCAACTAGCAAAAAATAATC+CGG | - | chr4_1:41876825-41876844 | None:intergenic | 30.0% | |
AAACATGAAAAAGGGAAATG+CGG | - | chr4_1:41877155-41877174 | None:intergenic | 30.0% | |
TTTATGCAGAATCATGTTGA+AGG | + | chr4_1:41877267-41877286 | Msa0548150:intron | 30.0% | |
ATAAAAATCAGCATCCCATA+AGG | - | chr4_1:41877343-41877362 | None:intergenic | 30.0% | |
GACGATGTTCATGTAAATAT+AGG | + | chr4_1:41877375-41877394 | Msa0548150:CDS | 30.0% | |
GTTGCTGAAAAATATTGAGT+AGG | - | chr4_1:41877622-41877641 | None:intergenic | 30.0% | |
TCAAAACAACGGATATACAT+TGG | + | chr4_1:41877670-41877689 | Msa0548150:CDS | 30.0% | |
!! | GTATGCTATTTCCAATGATT+TGG | + | chr4_1:41877886-41877905 | Msa0548150:CDS | 30.0% |
TATGTATGTTGCCAAATCAT+TGG | - | chr4_1:41877900-41877919 | None:intergenic | 30.0% | |
!! | AACCAAATCAATGGACTAAA+AGG | + | chr4_1:41877969-41877988 | Msa0548150:intron | 30.0% |
!! | AACCTTTTAGTCCATTGATT+TGG | - | chr4_1:41877974-41877993 | None:intergenic | 30.0% |
TGCTTGTATTTGTTCATATC+AGG | + | chr4_1:41878009-41878028 | Msa0548150:intron | 30.0% | |
GAGGTCTATAATTTATTGTC+TGG | - | chr4_1:41878157-41878176 | None:intergenic | 30.0% | |
TAGACCTCTTCAAATGATTT+AGG | + | chr4_1:41878169-41878188 | Msa0548150:intron | 30.0% | |
AGACCTCTTCAAATGATTTA+GGG | + | chr4_1:41878170-41878189 | Msa0548150:intron | 30.0% | |
!! | CAAATGATTTAGGGTCTTTT+TGG | + | chr4_1:41878179-41878198 | Msa0548150:intron | 30.0% |
TATAAGCATTTGTGAGACTT+TGG | + | chr4_1:41878231-41878250 | Msa0548150:intron | 30.0% | |
ATAAGCATTTGTGAGACTTT+GGG | + | chr4_1:41878232-41878251 | Msa0548150:intron | 30.0% | |
TTACTTTCATAAAGCTCTTC+AGG | + | chr4_1:41878273-41878292 | Msa0548150:intron | 30.0% | |
TTTATCCAAACATGGTCATA+TGG | + | chr4_1:41878426-41878445 | Msa0548150:intron | 30.0% | |
ACACTTTCAAATTATTGGGT+TGG | + | chr4_1:41878496-41878515 | Msa0548150:intron | 30.0% | |
!! | TTCAAATTATTGGGTTGGTT+TGG | + | chr4_1:41878501-41878520 | Msa0548150:intron | 30.0% |
!! | TTTGTGTTGCTTCATTTGAT+TGG | + | chr4_1:41878560-41878579 | Msa0548150:CDS | 30.0% |
TACTTCTTTAATCCTATCAG+CGG | - | chr4_1:41878608-41878627 | None:intergenic | 30.0% | |
! | GGATTAAAGAAGTACATAGA+AGG | + | chr4_1:41878614-41878633 | Msa0548150:CDS | 30.0% |
GGAAAAAAGAAAAATCTTGC+AGG | - | chr4_1:41878748-41878767 | None:intergenic | 30.0% | |
! | TCTATTCTTTGTTGCTTGAA+AGG | + | chr4_1:41878944-41878963 | Msa0548150:three_prime_UTR | 30.0% |
! | CTATTCTTTGTTGCTTGAAA+GGG | + | chr4_1:41878945-41878964 | Msa0548150:three_prime_UTR | 30.0% |
TCAATTATTGGCAAAAGGAA+AGG | - | chr4_1:41879048-41879067 | None:intergenic | 30.0% | |
AAATTGTTACGAAGTAGAGT+CGG | - | chr4_1:41879153-41879172 | None:intergenic | 30.0% | |
CTTGTTTGCAAGTATGGTAA+GGG | - | chr4_1:41874566-41874585 | None:intergenic | 35.0% | |
TATGTGAGTTGTGTTGTGTT+GGG | - | chr4_1:41874596-41874615 | None:intergenic | 35.0% | |
TTAATGACGTGGAAAAGTAG+AGG | + | chr4_1:41874843-41874862 | Msa0548150:exon | 35.0% | |
GGATTAAGTGGAATTAGATC+TGG | + | chr4_1:41875115-41875134 | Msa0548150:intron | 35.0% | |
!!! | TGCTGTTTTTGAAGTAAGAG+AGG | + | chr4_1:41875282-41875301 | Msa0548150:intron | 35.0% |
!!! | GCTGTTTTTGAAGTAAGAGA+GGG | + | chr4_1:41875283-41875302 | Msa0548150:intron | 35.0% |
ATCTGCCTTCTTCTTTATTC+CGG | + | chr4_1:41875560-41875579 | Msa0548150:intron | 35.0% | |
GTAAAAAATCTTTACACCGG+CGG | + | chr4_1:41875754-41875773 | Msa0548150:intron | 35.0% | |
ATATTGTTTGGGGAATCAAG+TGG | + | chr4_1:41875848-41875867 | Msa0548150:intron | 35.0% | |
! | TGGAGTATTCCTGAACAAAA+TGG | + | chr4_1:41875924-41875943 | Msa0548150:CDS | 35.0% |
! | TGTTCTTTTCTTGTGTCTGT+TGG | + | chr4_1:41876093-41876112 | Msa0548150:intron | 35.0% |
AGTTACAAGATCTGGAAATG+AGG | + | chr4_1:41876126-41876145 | Msa0548150:intron | 35.0% | |
TTGGACTTACGATTACATCA+TGG | - | chr4_1:41876227-41876246 | None:intergenic | 35.0% | |
ACAGCACATTTGCATTAGTT+TGG | - | chr4_1:41876269-41876288 | None:intergenic | 35.0% | |
CTGTATTGAATGTAGAGCTT+TGG | + | chr4_1:41876285-41876304 | Msa0548150:intron | 35.0% | |
CTCCTGTTTCAGAAGATATA+AGG | + | chr4_1:41876380-41876399 | Msa0548150:CDS | 35.0% | |
!! | GTCCTTATATCTTCTGAAAC+AGG | - | chr4_1:41876385-41876404 | None:intergenic | 35.0% |
AAGAAGCTAGAGGAAGAAAA+AGG | + | chr4_1:41876637-41876656 | Msa0548150:CDS | 35.0% | |
ATTGTCATGCGCTTTGTAAT+TGG | + | chr4_1:41876661-41876680 | Msa0548150:CDS | 35.0% | |
!!! | AGAGCTGTATTTTAGTCTTC+CGG | + | chr4_1:41876803-41876822 | Msa0548150:intron | 35.0% |
CTGATGTAGCACTAGTTAAA+AGG | - | chr4_1:41877026-41877045 | None:intergenic | 35.0% | |
!! | CTTTTAACTAGTGCTACATC+AGG | + | chr4_1:41877024-41877043 | Msa0548150:intron | 35.0% |
AACATGAAAAAGGGAAATGC+GGG | - | chr4_1:41877154-41877173 | None:intergenic | 35.0% | |
!! | GTCACTGTCATTGCTTTTAA+AGG | + | chr4_1:41877197-41877216 | Msa0548150:intron | 35.0% |
TTGTCTTTGCTGACAATTCA+AGG | - | chr4_1:41877296-41877315 | None:intergenic | 35.0% | |
TTTGATTGTTGCTGACAAGT+TGG | + | chr4_1:41877415-41877434 | Msa0548150:intron | 35.0% | |
TTTACACATAAGCTGATGTG+AGG | - | chr4_1:41877542-41877561 | None:intergenic | 35.0% | |
GAGTAGGATATTCAGACAAA+AGG | - | chr4_1:41877606-41877625 | None:intergenic | 35.0% | |
!! | TTAGGCATCGATCAAAACAA+CGG | + | chr4_1:41877659-41877678 | Msa0548150:CDS | 35.0% |
TACATTGGATGCATGAAATC+TGG | + | chr4_1:41877685-41877704 | Msa0548150:CDS | 35.0% | |
!!! | GTATTTCTCACTTTTGAGAC+AGG | - | chr4_1:41877717-41877736 | None:intergenic | 35.0% |
GTAAGAAGGTAAGAAGCTAA+TGG | - | chr4_1:41877775-41877794 | None:intergenic | 35.0% | |
! | TTTTATGTAGTAGGACCTAC+TGG | - | chr4_1:41877931-41877950 | None:intergenic | 35.0% |
TCTTCATAAGTATGCCAATG+AGG | + | chr4_1:41878037-41878056 | Msa0548150:CDS | 35.0% | |
TCAATAGGAGCTTGGTTTAT+TGG | + | chr4_1:41878065-41878084 | Msa0548150:CDS | 35.0% | |
TGGAAATTATATTCACCTGG+AGG | - | chr4_1:41878137-41878156 | None:intergenic | 35.0% | |
GTCTGGAAATTATATTCACC+TGG | - | chr4_1:41878140-41878159 | None:intergenic | 35.0% | |
AGACCCTAAATCATTTGAAG+AGG | - | chr4_1:41878176-41878195 | None:intergenic | 35.0% | |
!! | TTTAGGGTCTTTTTGGATTG+TGG | + | chr4_1:41878186-41878205 | Msa0548150:intron | 35.0% |
TGATTCCATATGACCATGTT+TGG | - | chr4_1:41878434-41878453 | None:intergenic | 35.0% | |
! | AAAGAAGTACATAGAAGGTG+TGG | + | chr4_1:41878619-41878638 | Msa0548150:CDS | 35.0% |
GAGAAGGTGAAAATGCTTTA+TGG | + | chr4_1:41878641-41878660 | Msa0548150:CDS | 35.0% | |
! | TTTATGGAGTGCTTCTTTCT+AGG | + | chr4_1:41878657-41878676 | Msa0548150:CDS | 35.0% |
AGTTAGGAAGAACTCATCAA+AGG | - | chr4_1:41878690-41878709 | None:intergenic | 35.0% | |
GGTAATAATCTTCCTGAGTT+AGG | - | chr4_1:41878706-41878725 | None:intergenic | 35.0% | |
CTTAAAATGTAGAAGGTCCA+TGG | - | chr4_1:41878867-41878886 | None:intergenic | 35.0% | |
TGTATCTTAGTAATTCCCCT+AGG | + | chr4_1:41879116-41879135 | Msa0548150:three_prime_UTR | 35.0% | |
GTATCTTAGTAATTCCCCTA+GGG | + | chr4_1:41879117-41879136 | Msa0548150:three_prime_UTR | 35.0% | |
TATCTTAGTAATTCCCCTAG+GGG | + | chr4_1:41879118-41879137 | Msa0548150:three_prime_UTR | 35.0% | |
GCTTGTTTGCAAGTATGGTA+AGG | - | chr4_1:41874567-41874586 | None:intergenic | 40.0% | |
!! | GTGTAGCTTGTTTGCAAGTA+TGG | - | chr4_1:41874572-41874591 | None:intergenic | 40.0% |
CTATGTGAGTTGTGTTGTGT+TGG | - | chr4_1:41874597-41874616 | None:intergenic | 40.0% | |
!! | AGAATGGGTTGAGAAGAAGA+TGG | - | chr4_1:41874680-41874699 | None:intergenic | 40.0% |
!!! | TGGGCACTTTTTCTTTGTCT+CGG | + | chr4_1:41874900-41874919 | Msa0548150:CDS | 40.0% |
!! | GTTTGACTCTGAAACCTCAA+GGG | - | chr4_1:41875502-41875521 | None:intergenic | 40.0% |
!! | AGTTTGACTCTGAAACCTCA+AGG | - | chr4_1:41875503-41875522 | None:intergenic | 40.0% |
ACCAACCGGAATAAAGAAGA+AGG | - | chr4_1:41875568-41875587 | None:intergenic | 40.0% | |
TTCTTCTTTATTCCGGTTGG+TGG | + | chr4_1:41875567-41875586 | Msa0548150:intron | 40.0% | |
TCTTCTTTATTCCGGTTGGT+GGG | + | chr4_1:41875568-41875587 | Msa0548150:intron | 40.0% | |
AAAAAATACACCCCACCAAC+CGG | - | chr4_1:41875582-41875601 | None:intergenic | 40.0% | |
ATTTAAGTCACATACACCGC+CGG | - | chr4_1:41875773-41875792 | None:intergenic | 40.0% | |
! | CTTGCAAGTCCATTTTGTTC+AGG | - | chr4_1:41875936-41875955 | None:intergenic | 40.0% |
!! | TTACCAGTTTCTGAAGCTGT+CGG | - | chr4_1:41875960-41875979 | None:intergenic | 40.0% |
CGCGAAACTAGAGATATGTA+TGG | + | chr4_1:41876149-41876168 | Msa0548150:CDS | 40.0% | |
!! | AGAAAGTACCTTATGGTCGT+AGG | + | chr4_1:41876424-41876443 | Msa0548150:CDS | 40.0% |
TTAATACTGCCTTTAGCAGC+AGG | + | chr4_1:41876449-41876468 | Msa0548150:CDS | 40.0% | |
CTTTAGCAGCAGGAAAAGAA+GGG | + | chr4_1:41876459-41876478 | Msa0548150:CDS | 40.0% | |
GGACAAAAGAAAGAAGCTAG+AGG | + | chr4_1:41876627-41876646 | Msa0548150:CDS | 40.0% | |
!! | GTTTCTTCATCCTGCTTTTG+AGG | + | chr4_1:41876733-41876752 | Msa0548150:intron | 40.0% |
TTAACTAGTGCTACATCAGG+AGG | + | chr4_1:41877027-41877046 | Msa0548150:intron | 40.0% | |
! | CTGCTTCAATAGCTCTATCT+AGG | - | chr4_1:41877056-41877075 | None:intergenic | 40.0% |
AGATAGAGCTATTGAAGCAG+AGG | + | chr4_1:41877056-41877075 | Msa0548150:CDS | 40.0% | |
! | GAAAGCATGGAGATTTCTTG+AGG | + | chr4_1:41877082-41877101 | Msa0548150:CDS | 40.0% |
ACCTTCTTACTTTGTTGCAG+AGG | + | chr4_1:41877785-41877804 | Msa0548150:intron | 40.0% | |
CCTTCTTACTTTGTTGCAGA+GGG | + | chr4_1:41877786-41877805 | Msa0548150:intron | 40.0% | |
CTTCTTACTTTGTTGCAGAG+GGG | + | chr4_1:41877787-41877806 | Msa0548150:intron | 40.0% | |
TCCTATTGACACATCCTCAT+TGG | - | chr4_1:41878054-41878073 | None:intergenic | 40.0% | |
TTGGTTTATTGGACTTGACG+TGG | + | chr4_1:41878076-41878095 | Msa0548150:CDS | 40.0% | |
! | GTTTGGTTTCAGATTGCGAA+TGG | + | chr4_1:41878518-41878537 | Msa0548150:intron | 40.0% |
TGATGAGTTCTTCCTAACTC+AGG | + | chr4_1:41878691-41878710 | Msa0548150:three_prime_UTR | 40.0% | |
!! | TTGCAGGCTTTGTTTCTTTC+TGG | - | chr4_1:41878732-41878751 | None:intergenic | 40.0% |
! | TTTTACACGCGAGAAAAAGC+TGG | + | chr4_1:41878811-41878830 | Msa0548150:three_prime_UTR | 40.0% |
! | TCATGGTTTGCAGCTAGATA+AGG | + | chr4_1:41878897-41878916 | Msa0548150:three_prime_UTR | 40.0% |
! | TCGGTATATTTTTCCCCTAG+GGG | - | chr4_1:41879134-41879153 | None:intergenic | 40.0% |
! | GTCGGTATATTTTTCCCCTA+GGG | - | chr4_1:41879135-41879154 | None:intergenic | 40.0% |
! | AGTCGGTATATTTTTCCCCT+AGG | - | chr4_1:41879136-41879155 | None:intergenic | 40.0% |
!! | GATCAGAAGTGTCAATGCTA+CGG | - | chr4_1:41879187-41879206 | None:intergenic | 40.0% |
! | ATGGGTTGAGAAGAAGATGG+TGG | - | chr4_1:41874677-41874696 | None:intergenic | 45.0% |
CTGGAATGCTCTTCACTAAC+AGG | + | chr4_1:41874934-41874953 | Msa0548150:CDS | 45.0% | |
ACGGAGTTCAAATTCTCTCG+GGG | - | chr4_1:41875479-41875498 | None:intergenic | 45.0% | |
GACGGAGTTCAAATTCTCTC+GGG | - | chr4_1:41875480-41875499 | None:intergenic | 45.0% | |
GGACGGAGTTCAAATTCTCT+CGG | - | chr4_1:41875481-41875500 | None:intergenic | 45.0% | |
AATTTGAACTCCGTCCCTTG+AGG | + | chr4_1:41875485-41875504 | Msa0548150:intron | 45.0% | |
GCCTTCTTCTTTATTCCGGT+TGG | + | chr4_1:41875564-41875583 | Msa0548150:intron | 45.0% | |
! | CTTCTTTATTCCGGTTGGTG+GGG | + | chr4_1:41875569-41875588 | Msa0548150:intron | 45.0% |
TGTTTGGGGAATCAAGTGGA+TGG | + | chr4_1:41875852-41875871 | Msa0548150:intron | 45.0% | |
GTTCAAGAGTCAGTACGAAG+TGG | + | chr4_1:41876355-41876374 | Msa0548150:CDS | 45.0% | |
TATAAGGACGACTGAGTCGA+CGG | + | chr4_1:41876396-41876415 | Msa0548150:CDS | 45.0% | |
!! | GGGCAAGAGAAAGTACCTTA+TGG | + | chr4_1:41876417-41876436 | Msa0548150:CDS | 45.0% |
! | CCTTCTTTTCCTGCTGCTAA+AGG | - | chr4_1:41876461-41876480 | None:intergenic | 45.0% |
CCTTTAGCAGCAGGAAAAGA+AGG | + | chr4_1:41876458-41876477 | Msa0548150:CDS | 45.0% | |
TTATGAACCTTGTGGCAACC+AGG | - | chr4_1:41876500-41876519 | None:intergenic | 45.0% | |
TGCGCTTTGTAATTGGACAC+AGG | + | chr4_1:41876668-41876687 | Msa0548150:CDS | 45.0% | |
TGAAAAAGGGAAATGCGGGA+CGG | - | chr4_1:41877150-41877169 | None:intergenic | 45.0% | |
CATTGGGAGAAACTCTCGTT+AGG | + | chr4_1:41877641-41877660 | Msa0548150:CDS | 45.0% | |
!!! | TCTCACTTTTGAGACAGGAC+TGG | - | chr4_1:41877712-41877731 | None:intergenic | 45.0% |
CCCTCTGCAACAAAGTAAGA+AGG | - | chr4_1:41877789-41877808 | None:intergenic | 45.0% | |
TACTTTGTTGCAGAGGGGTA+AGG | + | chr4_1:41877792-41877811 | Msa0548150:intron | 45.0% | |
AATAGCATACAACTGCCCTG+TGG | - | chr4_1:41877876-41877895 | None:intergenic | 45.0% | |
GCCAATGAGGATGTGTCAAT+AGG | + | chr4_1:41878050-41878069 | Msa0548150:CDS | 45.0% | |
AGGATGTGTCAATAGGAGCT+TGG | + | chr4_1:41878057-41878076 | Msa0548150:CDS | 45.0% | |
GATGATCGAAGACTTTGCTG+TGG | + | chr4_1:41878107-41878126 | Msa0548150:intron | 45.0% | |
GGTTTCAGATTGCGAATGGA+AGG | + | chr4_1:41878522-41878541 | Msa0548150:intron | 45.0% | |
TCATTTGATTGGAGCTGCAG+TGG | + | chr4_1:41878571-41878590 | Msa0548150:CDS | 45.0% | |
GAATTTGTAGGTCCGCTGAT+AGG | + | chr4_1:41878593-41878612 | Msa0548150:CDS | 45.0% | |
! | GTACATAGAAGGTGTGGAGA+AGG | + | chr4_1:41878625-41878644 | Msa0548150:CDS | 45.0% |
!! | GGCTTTGTTTCTTTCTGGAG+TGG | - | chr4_1:41878727-41878746 | None:intergenic | 45.0% |
AAGAGAGAATGCTTGCTCCA+TGG | + | chr4_1:41878847-41878866 | Msa0548150:three_prime_UTR | 45.0% | |
!! | AAATAAATGTATAATTAATT+TGG | + | chr4_1:41876994-41877013 | Msa0548150:intron | 5.0% |
GCAAGTATGGTAAGGGACGT+TGG | - | chr4_1:41874559-41874578 | None:intergenic | 50.0% | |
TGTCTCGGTAGTTTCTGTGC+TGG | + | chr4_1:41874915-41874934 | Msa0548150:CDS | 50.0% | |
!! | GACTCTGAAACCTCAAGGGA+CGG | - | chr4_1:41875498-41875517 | None:intergenic | 50.0% |
AGACCGACAGCTTCAGAAAC+TGG | + | chr4_1:41875954-41875973 | Msa0548150:CDS | 50.0% | |
ATAAGGACGACTGAGTCGAC+GGG | + | chr4_1:41876397-41876416 | Msa0548150:CDS | 50.0% | |
CAGCAGGAAAAGAAGGGACT+CGG | + | chr4_1:41876465-41876484 | Msa0548150:CDS | 50.0% | |
! | GGAAAAGAAGGGACTCGGTT+CGG | + | chr4_1:41876470-41876489 | Msa0548150:CDS | 50.0% |
! | GAAAAGAAGGGACTCGGTTC+GGG | + | chr4_1:41876471-41876490 | Msa0548150:CDS | 50.0% |
GAAGCAGAGGACAGAAAGCA+TGG | + | chr4_1:41877069-41877088 | Msa0548150:CDS | 50.0% | |
GCATGGAGATTTCTTGAGGC+TGG | + | chr4_1:41877086-41877105 | Msa0548150:CDS | 50.0% | |
TTGCCACTGCTGTGACCTTA+TGG | + | chr4_1:41877325-41877344 | Msa0548150:CDS | 50.0% | |
TGCCACTGCTGTGACCTTAT+GGG | + | chr4_1:41877326-41877345 | Msa0548150:CDS | 50.0% | |
ATCCCATAAGGTCACAGCAG+TGG | - | chr4_1:41877331-41877350 | None:intergenic | 50.0% | |
ACTTCCAATGCTCGGGTTCA+TGG | - | chr4_1:41877820-41877839 | None:intergenic | 50.0% | |
!! | GAACCCGAGCATTGGAAGTT+TGG | + | chr4_1:41877821-41877840 | Msa0548150:CDS | 50.0% |
TCGCCAAACTTCCAATGCTC+GGG | - | chr4_1:41877827-41877846 | None:intergenic | 50.0% | |
CTCGCCAAACTTCCAATGCT+CGG | - | chr4_1:41877828-41877847 | None:intergenic | 50.0% | |
CATTGGAAGTTTGGCGAGTC+TGG | + | chr4_1:41877830-41877849 | Msa0548150:CDS | 50.0% | |
GGAGCTGCAGTGGAATTTGT+AGG | + | chr4_1:41878581-41878600 | Msa0548150:CDS | 50.0% | |
! | GGAGCTTGATAGCTAGCCAT+TGG | - | chr4_1:41878992-41879011 | None:intergenic | 50.0% |
!! | TCGGGTTGAGCCTCAAAAGC+AGG | - | chr4_1:41876746-41876765 | None:intergenic | 55.0% |
GGTACCATGAACCCGAGCAT+TGG | + | chr4_1:41877813-41877832 | Msa0548150:CDS | 55.0% | |
AAGTACTTCCGCCATGCCAC+AGG | + | chr4_1:41877857-41877876 | Msa0548150:CDS | 55.0% | |
AGTACTTCCGCCATGCCACA+GGG | + | chr4_1:41877858-41877877 | Msa0548150:CDS | 55.0% | |
CATACAACTGCCCTGTGGCA+TGG | - | chr4_1:41877871-41877890 | None:intergenic | 55.0% | |
! | AGATGGACTTGGCTGCTGCG+AGG | + | chr4_1:41876329-41876348 | Msa0548150:CDS | 60.0% |
! | GATGGACTTGGCTGCTGCGA+GGG | + | chr4_1:41876330-41876349 | Msa0548150:CDS | 60.0% |
ACAACTGCCCTGTGGCATGG+CGG | - | chr4_1:41877868-41877887 | None:intergenic | 60.0% | |
! | CTTTGCTGTGGCACTCCTCC+AGG | + | chr4_1:41878119-41878138 | Msa0548150:intron | 60.0% |
! | TGCGAATGGAAGGCGCAAGC+AGG | + | chr4_1:41878532-41878551 | Msa0548150:CDS | 60.0% |
CGGGCTACCTGGTTGCCACA+AGG | + | chr4_1:41876490-41876509 | Msa0548150:CDS | 65.0% | |
!! | GGGACTCGGTTCGGGCTACC+TGG | + | chr4_1:41876479-41876498 | Msa0548150:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 41874549 | 41879208 | 41874549 | ID=Msa0548150;Name=Msa0548150 |
chr4_1 | mRNA | 41874549 | 41879208 | 41874549 | ID=Msa0548150-mRNA-1;Parent=Msa0548150;Name=Msa0548150-mRNA-1;_AED=0.13;_eAED=0.13;_QI=297|0.9|0.90|1|1|1|11|530|402 |
chr4_1 | exon | 41874549 | 41874955 | 41874549 | ID=Msa0548150-mRNA-1:exon:10745;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41875920 | 41876016 | 41875920 | ID=Msa0548150-mRNA-1:exon:10746;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41876128 | 41876201 | 41876128 | ID=Msa0548150-mRNA-1:exon:10747;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41876300 | 41876511 | 41876300 | ID=Msa0548150-mRNA-1:exon:10748;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41876626 | 41876689 | 41876626 | ID=Msa0548150-mRNA-1:exon:10749;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41877035 | 41877107 | 41877035 | ID=Msa0548150-mRNA-1:exon:10750;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41877276 | 41877396 | 41877276 | ID=Msa0548150-mRNA-1:exon:10751;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41877638 | 41877725 | 41877638 | ID=Msa0548150-mRNA-1:exon:10752;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41877805 | 41877930 | 41877805 | ID=Msa0548150-mRNA-1:exon:10753;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41878031 | 41878125 | 41878031 | ID=Msa0548150-mRNA-1:exon:10754;Parent=Msa0548150-mRNA-1 |
chr4_1 | exon | 41878530 | 41879208 | 41878530 | ID=Msa0548150-mRNA-1:exon:10755;Parent=Msa0548150-mRNA-1 |
chr4_1 | five_prime_UTR | 41874549 | 41874845 | 41874549 | ID=Msa0548150-mRNA-1:five_prime_utr;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41874846 | 41874955 | 41874846 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41875920 | 41876016 | 41875920 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41876128 | 41876201 | 41876128 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41876300 | 41876511 | 41876300 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41876626 | 41876689 | 41876626 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41877035 | 41877107 | 41877035 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41877276 | 41877396 | 41877276 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41877638 | 41877725 | 41877638 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41877805 | 41877930 | 41877805 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41878031 | 41878125 | 41878031 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | CDS | 41878530 | 41878678 | 41878530 | ID=Msa0548150-mRNA-1:cds;Parent=Msa0548150-mRNA-1 |
chr4_1 | three_prime_UTR | 41878679 | 41879208 | 41878679 | ID=Msa0548150-mRNA-1:three_prime_utr;Parent=Msa0548150-mRNA-1 |
Gene Sequence |
Protein sequence |