Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230130 | XP_013444042.1 | 83.577 | 274 | 18 | 2 | 16 | 287 | 17 | 265 | 8.57e-135 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230130 | sp|Q9SHQ8|HIP4_ARATH | 50.888 | 169 | 71 | 2 | 26 | 184 | 13 | 179 | 7.11e-46 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230130 | G7ZWQ0 | 83.577 | 274 | 18 | 2 | 16 | 287 | 17 | 265 | 4.09e-135 | 392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1230130 | 0.801294 | 9.636930e-49 | -8.615850e-47 |
| Msa0011930 | Msa1230130 | 0.810260 | 1.258931e-50 | -8.615850e-47 |
| Msa0106620 | Msa1230130 | 0.817789 | 2.747995e-52 | -8.615850e-47 |
| Msa0106710 | Msa1230130 | 0.815980 | 7.001471e-52 | -8.615850e-47 |
| Msa0108390 | Msa1230130 | 0.800775 | 1.230184e-48 | -8.615850e-47 |
| Msa0616450 | Msa1230130 | 0.808672 | 2.760726e-50 | -8.615850e-47 |
| Msa0655920 | Msa1230130 | 0.809125 | 2.208487e-50 | -8.615850e-47 |
| Msa0698290 | Msa1230130 | 0.817523 | 3.156117e-52 | -8.615850e-47 |
| Msa0721280 | Msa1230130 | 0.809593 | 1.752988e-50 | -8.615850e-47 |
| Msa0784480 | Msa1230130 | 0.810095 | 1.366701e-50 | -8.615850e-47 |
| Msa0795070 | Msa1230130 | 0.801069 | 1.071377e-48 | -8.615850e-47 |
| Msa0822500 | Msa1230130 | 0.805453 | 1.325207e-49 | -8.615850e-47 |
| Msa0187030 | Msa1230130 | 0.808272 | 3.360765e-50 | -8.615850e-47 |
| Msa0192640 | Msa1230130 | 0.805899 | 1.068120e-49 | -8.615850e-47 |
| Msa0204960 | Msa1230130 | 0.805591 | 1.239775e-49 | -8.615850e-47 |
| Msa0205010 | Msa1230130 | 0.806711 | 7.204706e-50 | -8.615850e-47 |
| Msa0207350 | Msa1230130 | 0.821073 | 4.900401e-53 | -8.615850e-47 |
| Msa0218810 | Msa1230130 | 0.800340 | 1.508835e-48 | -8.615850e-47 |
| Msa1230130 | Msa1262010 | 0.800489 | 1.407248e-48 | -8.615850e-47 |
| Msa1230130 | Msa1271130 | 0.818805 | 1.617820e-52 | -8.615850e-47 |
| Msa1230130 | Msa1272680 | 0.822072 | 2.880083e-53 | -8.615850e-47 |
| Msa1230130 | Msa1276150 | 0.807175 | 5.746581e-50 | -8.615850e-47 |
| Msa1230130 | Msa1285550 | 0.800024 | 1.749506e-48 | -8.615850e-47 |
| Msa1230130 | Msa1329050 | -0.810693 | 1.015091e-50 | -8.615850e-47 |
| Msa1230130 | Msa1353470 | 0.804975 | 1.669082e-49 | -8.615850e-47 |
| Msa1230130 | Msa1357890 | 0.805292 | 1.432545e-49 | -8.615850e-47 |
| Msa1230130 | Msa1370590 | 0.809832 | 1.557213e-50 | -8.615850e-47 |
| Msa1230130 | Msa1382400 | 0.817217 | 3.697637e-52 | -8.615850e-47 |
| Msa1230130 | Msa1384100 | 0.808512 | 2.986880e-50 | -8.615850e-47 |
| Msa1230130 | Msa1398090 | 0.815501 | 8.948833e-52 | -8.615850e-47 |
| Msa1230130 | Msa1418240 | 0.819184 | 1.326796e-52 | -8.615850e-47 |
| Msa1230130 | Msa1444120 | 0.807596 | 4.679846e-50 | -8.615850e-47 |
| Msa1230130 | Msa1444510 | 0.804740 | 1.868220e-49 | -8.615850e-47 |
| Msa1230130 | Msa1446080 | 0.811075 | 8.393393e-51 | -8.615850e-47 |
| Msa1230130 | Msa1454530 | 0.800024 | 1.749318e-48 | -8.615850e-47 |
| Msa1230130 | Msa1456230 | 0.813221 | 2.856921e-51 | -8.615850e-47 |
| Msa1230130 | Msa1463900 | 0.804552 | 2.044864e-49 | -8.615850e-47 |
| Msa0403660 | Msa1230130 | 0.801862 | 7.370773e-49 | -8.615850e-47 |
| Msa0427100 | Msa1230130 | 0.809696 | 1.665842e-50 | -8.615850e-47 |
| Msa0427120 | Msa1230130 | 0.809648 | 1.705350e-50 | -8.615850e-47 |
| Msa0432160 | Msa1230130 | 0.800538 | 1.374902e-48 | -8.615850e-47 |
| Msa0467100 | Msa1230130 | 0.807789 | 4.257872e-50 | -8.615850e-47 |
| Msa0476680 | Msa1230130 | 0.803728 | 3.035525e-49 | -8.615850e-47 |
| Msa0482040 | Msa1230130 | 0.810111 | 1.355880e-50 | -8.615850e-47 |
| Msa1002850 | Msa1230130 | 0.800643 | 1.309013e-48 | -8.615850e-47 |
| Msa1034500 | Msa1230130 | 0.815293 | 9.956829e-52 | -8.615850e-47 |
| Msa1037520 | Msa1230130 | 0.808339 | 3.252030e-50 | -8.615850e-47 |
| Msa1061980 | Msa1230130 | 0.801060 | 1.075896e-48 | -8.615850e-47 |
| Msa1063420 | Msa1230130 | 0.815321 | 9.813344e-52 | -8.615850e-47 |
| Msa1089450 | Msa1230130 | 0.807122 | 5.897211e-50 | -8.615850e-47 |
| Msa1094190 | Msa1230130 | 0.805581 | 1.245842e-49 | -8.615850e-47 |
| Msa0241140 | Msa1230130 | 0.821256 | 4.446332e-53 | -8.615850e-47 |
| Msa0242530 | Msa1230130 | 0.801525 | 8.643400e-49 | -8.615850e-47 |
| Msa0277420 | Msa1230130 | 0.806406 | 8.353478e-50 | -8.615850e-47 |
| Msa0296790 | Msa1230130 | 0.800747 | 1.246396e-48 | -8.615850e-47 |
| Msa0317970 | Msa1230130 | 0.811466 | 6.902733e-51 | -8.615850e-47 |
| Msa0322900 | Msa1230130 | 0.800103 | 1.686003e-48 | -8.615850e-47 |
| Msa0343850 | Msa1230130 | 0.814200 | 1.738711e-51 | -8.615850e-47 |
| Msa1137570 | Msa1230130 | 0.804334 | 2.270174e-49 | -8.615850e-47 |
| Msa1145810 | Msa1230130 | 0.805116 | 1.559080e-49 | -8.615850e-47 |
| Msa1168550 | Msa1230130 | 0.800879 | 1.171407e-48 | -8.615850e-47 |
| Msa1168590 | Msa1230130 | 0.808407 | 3.144723e-50 | -8.615850e-47 |
| Msa1178580 | Msa1230130 | 0.809223 | 2.104319e-50 | -8.615850e-47 |
| Msa1204100 | Msa1230130 | -0.811838 | 5.729204e-51 | -8.615850e-47 |
| Msa0482940 | Msa1230130 | 0.808599 | 2.861031e-50 | -8.615850e-47 |
| Msa0485240 | Msa1230130 | 0.816691 | 4.854165e-52 | -8.615850e-47 |
| Msa0491000 | Msa1230130 | 0.805588 | 1.241764e-49 | -8.615850e-47 |
| Msa0521010 | Msa1230130 | 0.804555 | 2.042260e-49 | -8.615850e-47 |
| Msa0579660 | Msa1230130 | 0.806935 | 6.461246e-50 | -8.615850e-47 |
| Msa0592270 | Msa1230130 | 0.801081 | 1.065575e-48 | -8.615850e-47 |
| Msa0853520 | Msa1230130 | 0.809773 | 1.603272e-50 | -8.615850e-47 |
| Msa0894710 | Msa1230130 | 0.813506 | 2.473230e-51 | -8.615850e-47 |
| Msa0936390 | Msa1230130 | 0.810075 | 1.380644e-50 | -8.615850e-47 |
| Msa0944200 | Msa1230130 | 0.810957 | 8.899671e-51 | -8.615850e-47 |
| Msa0960390 | Msa1230130 | 0.816846 | 4.479563e-52 | -8.615850e-47 |
| Msa0962840 | Msa1230130 | 0.806988 | 6.293892e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230130 | MtrunA17_Chr8g0337951 | 83.577 | 274 | 18 | 2 | 16 | 287 | 17 | 265 | 7.88e-139 | 392 |
| Msa1230130 | MtrunA17_Chr3g0094841 | 30.000 | 260 | 130 | 5 | 29 | 286 | 27 | 236 | 2.16e-27 | 106 |
| Msa1230130 | MtrunA17_Chr8g0386231 | 34.317 | 271 | 159 | 6 | 31 | 286 | 54 | 320 | 1.78e-25 | 103 |
| Msa1230130 | MtrunA17_Chr3g0128091 | 30.385 | 260 | 166 | 5 | 30 | 287 | 38 | 284 | 5.62e-24 | 98.2 |
| Msa1230130 | MtrunA17_Chr1g0180631 | 27.410 | 332 | 187 | 7 | 7 | 286 | 3 | 332 | 8.17e-22 | 93.2 |
| Msa1230130 | MtrunA17_Chr2g0290471 | 32.955 | 264 | 137 | 6 | 31 | 286 | 37 | 268 | 6.45e-20 | 87.0 |
| Msa1230130 | MtrunA17_Chr4g0028461 | 32.515 | 163 | 100 | 2 | 29 | 183 | 67 | 227 | 2.22e-18 | 83.6 |
| Msa1230130 | MtrunA17_Chr3g0132061 | 31.250 | 160 | 103 | 2 | 31 | 183 | 37 | 196 | 3.95e-17 | 79.7 |
| Msa1230130 | MtrunA17_Chr5g0429111 | 25.325 | 154 | 113 | 1 | 30 | 183 | 55 | 206 | 2.76e-16 | 77.8 |
| Msa1230130 | MtrunA17_Chr7g0264601 | 26.977 | 215 | 122 | 3 | 16 | 204 | 3 | 208 | 1.80e-15 | 75.5 |
| Msa1230130 | MtrunA17_Chr4g0001151 | 31.852 | 135 | 81 | 3 | 31 | 158 | 171 | 301 | 7.02e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230130 | AT1G29000.1 | 50.888 | 169 | 71 | 2 | 26 | 184 | 13 | 179 | 7.23e-47 | 159 |
| Msa1230130 | AT1G29000.2 | 50.888 | 169 | 71 | 2 | 26 | 184 | 13 | 179 | 7.23e-47 | 159 |
| Msa1230130 | AT5G50740.5 | 31.818 | 264 | 161 | 4 | 31 | 286 | 30 | 282 | 4.57e-30 | 115 |
| Msa1230130 | AT5G50740.1 | 31.818 | 264 | 161 | 4 | 31 | 286 | 30 | 282 | 4.57e-30 | 115 |
| Msa1230130 | AT5G50740.3 | 31.818 | 264 | 161 | 4 | 31 | 286 | 37 | 289 | 7.52e-30 | 114 |
| Msa1230130 | AT3G02960.1 | 31.694 | 183 | 119 | 3 | 5 | 184 | 13 | 192 | 4.27e-23 | 95.5 |
| Msa1230130 | AT5G24580.4 | 27.675 | 271 | 172 | 5 | 31 | 287 | 59 | 319 | 7.25e-23 | 96.3 |
| Msa1230130 | AT5G24580.1 | 27.675 | 271 | 172 | 5 | 31 | 287 | 59 | 319 | 7.25e-23 | 96.3 |
| Msa1230130 | AT5G24580.2 | 27.675 | 271 | 172 | 5 | 31 | 287 | 58 | 318 | 8.15e-23 | 96.3 |
| Msa1230130 | AT5G63530.2 | 29.078 | 282 | 171 | 7 | 31 | 286 | 61 | 339 | 2.15e-22 | 95.5 |
| Msa1230130 | AT5G63530.1 | 29.078 | 282 | 171 | 7 | 31 | 286 | 76 | 354 | 2.97e-22 | 95.1 |
| Msa1230130 | AT5G24580.3 | 26.937 | 271 | 171 | 6 | 31 | 287 | 59 | 316 | 1.09e-19 | 87.4 |
| Msa1230130 | AT5G03380.1 | 27.273 | 220 | 120 | 2 | 7 | 186 | 3 | 222 | 1.35e-17 | 82.4 |
| Msa1230130 | AT5G60800.1 | 27.536 | 276 | 164 | 4 | 28 | 286 | 26 | 282 | 1.38e-17 | 81.3 |
| Msa1230130 | AT5G60800.2 | 27.536 | 276 | 164 | 4 | 28 | 286 | 26 | 282 | 2.10e-17 | 80.9 |
| Msa1230130 | AT2G36950.1 | 26.567 | 335 | 165 | 8 | 31 | 286 | 53 | 385 | 3.03e-17 | 81.3 |
| Msa1230130 | AT5G50740.2 | 34.711 | 121 | 72 | 2 | 31 | 144 | 30 | 150 | 1.37e-15 | 73.2 |
| Msa1230130 | AT5G24580.5 | 26.446 | 242 | 154 | 5 | 60 | 287 | 1 | 232 | 1.89e-15 | 74.3 |
| Msa1230130 | AT5G50740.4 | 34.711 | 121 | 72 | 2 | 31 | 144 | 37 | 157 | 4.72e-15 | 72.0 |
| Msa1230130 | AT5G03380.2 | 26.804 | 194 | 102 | 2 | 33 | 186 | 2 | 195 | 1.45e-14 | 73.6 |
Find 47 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATAAAAGAACATAAAA+AGG | 0.239075 | 8_2:-6117181 | Msa1230130:CDS |
| TGAGAAGGGAAAAGATAAAA+AGG | 0.255012 | 8_2:-6119072 | Msa1230130:CDS |
| TAGGAAATAGAACAAGAATT+AGG | 0.330191 | 8_2:+6116889 | None:intergenic |
| CTTACATCCTTAGCTTCCTT+TGG | 0.331951 | 8_2:+6118652 | None:intergenic |
| ATCTCCTTAGGCTTCACTTT+TGG | 0.342041 | 8_2:+6118694 | None:intergenic |
| GCCTAAGGAGATTATTATTA+CGG | 0.342379 | 8_2:-6118683 | Msa1230130:CDS |
| ACCGTGATAGTTCGGACAAT+TGG | 0.342873 | 8_2:+6117521 | None:intergenic |
| ATGATGAATTTCTATTACTT+TGG | 0.343843 | 8_2:+6117008 | None:intergenic |
| AAAGGAAGAAAAGAAAGAAA+AGG | 0.363989 | 8_2:-6117163 | Msa1230130:CDS |
| ACGAGATGAGATTAAAATAA+AGG | 0.367193 | 8_2:-6116977 | Msa1230130:CDS |
| TAAACATAGTGAATAATATA+AGG | 0.370125 | 8_2:+6116940 | None:intergenic |
| AAGGAAGAAAAGAAAGAAAA+GGG | 0.374810 | 8_2:-6117162 | Msa1230130:CDS |
| AAGAAGGACAAGGGCAAAGA+AGG | 0.417924 | 8_2:-6117048 | Msa1230130:CDS |
| AAAGGAGAAATCAAGGCAAA+AGG | 0.441442 | 8_2:-6118787 | Msa1230130:CDS |
| GCTCAAAGTCTAATAGTTGA+AGG | 0.463896 | 8_2:-6117270 | Msa1230130:CDS |
| TAGACTTTGAGCTTTCTTGT+CGG | 0.464535 | 8_2:+6117281 | None:intergenic |
| AGAAGAAAAGAAAGATGAGA+AGG | 0.466453 | 8_2:-6119087 | Msa1230130:CDS |
| TCCGTAATAATAATCTCCTT+AGG | 0.473974 | 8_2:+6118682 | None:intergenic |
| GAAGAAAAGAAAGATGAGAA+GGG | 0.474884 | 8_2:-6119086 | Msa1230130:CDS |
| TTCTGGCAATAAGGAATGGC+AGG | 0.478136 | 8_2:-6119116 | None:intergenic |
| AAGGAGAAATCAAGGCAAAA+GGG | 0.480202 | 8_2:-6118786 | Msa1230130:CDS |
| GGGCAAAGAAGAAGAAAAGA+AGG | 0.482246 | 8_2:-6117064 | Msa1230130:CDS |
| GGGCAAAGAAGAAGAAAAGA+AGG | 0.482246 | 8_2:-6117091 | Msa1230130:CDS |
| GAACCTTCACCGTGATAGTT+CGG | 0.491514 | 8_2:+6117513 | None:intergenic |
| TATTGAGAAAGGAGAAATCA+AGG | 0.521327 | 8_2:-6118794 | Msa1230130:CDS |
| GTAGAAATGAATATTGAGAA+AGG | 0.528475 | 8_2:-6118805 | Msa1230130:CDS |
| AGTTGAAGGGAGCATTGAAG+TGG | 0.542527 | 8_2:-6117256 | Msa1230130:CDS |
| AAGCATCTCTTAACTACTCA+AGG | 0.543765 | 8_2:-6118963 | Msa1230130:intron |
| AAAGTAATAGAAATTCATCA+TGG | 0.570530 | 8_2:-6117006 | Msa1230130:CDS |
| TTCTCATCACTGAATAATTG+TGG | 0.571327 | 8_2:+6116913 | None:intergenic |
| GAAGAAGAAAAGAAGGACAA+GGG | 0.572285 | 8_2:-6117057 | Msa1230130:CDS |
| GAAGAAGAAAAGAAGGACAA+GGG | 0.572285 | 8_2:-6117084 | Msa1230130:CDS |
| CTCAAAGTCTAATAGTTGAA+GGG | 0.572909 | 8_2:-6117269 | Msa1230130:CDS |
| AGAAGAAGAAAAGAAGGACA+AGG | 0.578619 | 8_2:-6117058 | Msa1230130:CDS |
| AGAAGAAGAAAAGAAGGACA+AGG | 0.578619 | 8_2:-6117085 | Msa1230130:CDS |
| GGCAATAAGGAATGGCAGGA+GGG | 0.588187 | 8_2:-6119112 | None:intergenic |
| GCCAATTGTCCGAACTATCA+CGG | 0.589016 | 8_2:-6117522 | Msa1230130:CDS |
| ATCACCAAAAGTGAAGCCTA+AGG | 0.590402 | 8_2:-6118698 | Msa1230130:CDS |
| AAAGGAAGAAAAGAAAGACA+AGG | 0.592626 | 8_2:-6117112 | Msa1230130:CDS |
| AAGGAAGAAAAGAAAGACAA+GGG | 0.601578 | 8_2:-6117111 | Msa1230130:CDS |
| AACTTGCATTGTCAAGAATG+TGG | 0.604558 | 8_2:-6118999 | Msa1230130:CDS |
| ACTTGCATTGTCAAGAATGT+GGG | 0.635040 | 8_2:-6118998 | Msa1230130:CDS |
| TGTCCGAACTATCACGGTGA+AGG | 0.635919 | 8_2:-6117516 | Msa1230130:CDS |
| TGGCAATAAGGAATGGCAGG+AGG | 0.640559 | 8_2:-6119113 | None:intergenic |
| AAGAGTGCATAGAAATGCAG+AGG | 0.644270 | 8_2:-6117208 | Msa1230130:CDS |
| CGTAGATTAATCAAGCACAA+AGG | 0.685243 | 8_2:-6117455 | Msa1230130:intron |
| CATGCATTGTGACAAATGTG+AGG | 0.745793 | 8_2:-6117489 | Msa1230130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATATATTTTTTTTTTTG+AGG | - | chr8_2:6117456-6117475 | Msa1230130:CDS | 10.0% |
| !!! | TGATATATTTTTTTTTTTGA+GGG | - | chr8_2:6117457-6117476 | Msa1230130:CDS | 10.0% |
| !! | ATGAAAAATTACAAAAATAA+AGG | + | chr8_2:6117658-6117677 | None:intergenic | 10.0% |
| !!! | ATGATATATTTTTTTTTTTG+AGG | - | chr8_2:6117456-6117475 | Msa1230130:CDS | 10.0% |
| !!! | TGATATATTTTTTTTTTTGA+GGG | - | chr8_2:6117457-6117476 | Msa1230130:CDS | 10.0% |
| !! | ATGAAAAATTACAAAAATAA+AGG | + | chr8_2:6117658-6117677 | None:intergenic | 10.0% |
| !!! | ATAATTTCCATATGATTTTA+TGG | - | chr8_2:6117071-6117090 | Msa1230130:CDS | 15.0% |
| !!! | TAATTTCCATATGATTTTAT+GGG | - | chr8_2:6117072-6117091 | Msa1230130:CDS | 15.0% |
| !!! | TCATTGTATTTTATTTTGTA+GGG | - | chr8_2:6117152-6117171 | Msa1230130:CDS | 15.0% |
| !!! | TTTTATGTTTTAAGTGTTAA+GGG | + | chr8_2:6117525-6117544 | None:intergenic | 15.0% |
| !!! | ATTTTATGTTTTAAGTGTTA+AGG | + | chr8_2:6117526-6117545 | None:intergenic | 15.0% |
| !! | ACTTAAAACATAAAATTTAG+TGG | - | chr8_2:6117530-6117549 | Msa1230130:intron | 15.0% |
| !! | AATTGTAATATAATATGAGT+TGG | + | chr8_2:6117581-6117600 | None:intergenic | 15.0% |
| !!! | ATCTTATATCTTATTTTCTA+TGG | - | chr8_2:6117949-6117968 | Msa1230130:intron | 15.0% |
| !!! | TATTTTTTTCTTCTACTATT+TGG | - | chr8_2:6117995-6118014 | Msa1230130:intron | 15.0% |
| !!! | GATTGCTTATTAAATTTTTA+CGG | + | chr8_2:6118028-6118047 | None:intergenic | 15.0% |
| !!! | TAATTCTCTTAATTTTGTAA+GGG | - | chr8_2:6118073-6118092 | Msa1230130:intron | 15.0% |
| !!! | CATCTTAAAACTTTAAAAAT+TGG | + | chr8_2:6118177-6118196 | None:intergenic | 15.0% |
| !!! | TTTTCTCAAATTTTAAAGAA+AGG | + | chr8_2:6118300-6118319 | None:intergenic | 15.0% |
| !! | TAAACATAGTGAATAATATA+AGG | + | chr8_2:6119052-6119071 | None:intergenic | 15.0% |
| !!! | ATAATTTCCATATGATTTTA+TGG | - | chr8_2:6117071-6117090 | Msa1230130:CDS | 15.0% |
| !!! | TAATTTCCATATGATTTTAT+GGG | - | chr8_2:6117072-6117091 | Msa1230130:CDS | 15.0% |
| !!! | TCATTGTATTTTATTTTGTA+GGG | - | chr8_2:6117152-6117171 | Msa1230130:CDS | 15.0% |
| !!! | TTTTATGTTTTAAGTGTTAA+GGG | + | chr8_2:6117525-6117544 | None:intergenic | 15.0% |
| !!! | ATTTTATGTTTTAAGTGTTA+AGG | + | chr8_2:6117526-6117545 | None:intergenic | 15.0% |
| !! | ACTTAAAACATAAAATTTAG+TGG | - | chr8_2:6117530-6117549 | Msa1230130:intron | 15.0% |
| !! | AATTGTAATATAATATGAGT+TGG | + | chr8_2:6117581-6117600 | None:intergenic | 15.0% |
| !!! | ATCTTATATCTTATTTTCTA+TGG | - | chr8_2:6117949-6117968 | Msa1230130:intron | 15.0% |
| !!! | TATTTTTTTCTTCTACTATT+TGG | - | chr8_2:6117995-6118014 | Msa1230130:intron | 15.0% |
| !!! | GATTGCTTATTAAATTTTTA+CGG | + | chr8_2:6118028-6118047 | None:intergenic | 15.0% |
| !!! | TAATTCTCTTAATTTTGTAA+GGG | - | chr8_2:6118073-6118092 | Msa1230130:intron | 15.0% |
| !!! | CATCTTAAAACTTTAAAAAT+TGG | + | chr8_2:6118177-6118196 | None:intergenic | 15.0% |
| !!! | TTTTCTCAAATTTTAAAGAA+AGG | + | chr8_2:6118300-6118319 | None:intergenic | 15.0% |
| !! | TAAACATAGTGAATAATATA+AGG | + | chr8_2:6119052-6119071 | None:intergenic | 15.0% |
| !!! | GTCATTGTATTTTATTTTGT+AGG | - | chr8_2:6117151-6117170 | Msa1230130:CDS | 20.0% |
| !!! | CATTGTATTTTATTTTGTAG+GGG | - | chr8_2:6117153-6117172 | Msa1230130:CDS | 20.0% |
| !!! | TAAGCTTCAAAATTTTCAAA+GGG | + | chr8_2:6117237-6117256 | None:intergenic | 20.0% |
| !!! | ATAAGCTTCAAAATTTTCAA+AGG | + | chr8_2:6117238-6117257 | None:intergenic | 20.0% |
| !!! | TTAAGATTTGAGTTTGATTT+TGG | - | chr8_2:6117378-6117397 | Msa1230130:intron | 20.0% |
| !!! | TTTATGTTTTAAGTGTTAAG+GGG | + | chr8_2:6117524-6117543 | None:intergenic | 20.0% |
| !! | TTTCAATAAGATTCAAAGTT+TGG | - | chr8_2:6117732-6117751 | Msa1230130:intron | 20.0% |
| !! | CAATTTAGATCTATTGAAAA+GGG | + | chr8_2:6117781-6117800 | None:intergenic | 20.0% |
| !!! | AATTTTCCATTCTTAGATAA+AGG | + | chr8_2:6117870-6117889 | None:intergenic | 20.0% |
| !!! | TTATTAAATTTTTACGGCTA+AGG | + | chr8_2:6118022-6118041 | None:intergenic | 20.0% |
| !! | GATGAATTAACAATAATTCT+AGG | + | chr8_2:6118050-6118069 | None:intergenic | 20.0% |
| !!! | GTAATTCTCTTAATTTTGTA+AGG | - | chr8_2:6118072-6118091 | Msa1230130:intron | 20.0% |
| !!! | TAAGATGCTTTTTTTTTTTG+AGG | - | chr8_2:6118190-6118209 | Msa1230130:intron | 20.0% |
| !!! | AAGATGCTTTTTTTTTTTGA+GGG | - | chr8_2:6118191-6118210 | Msa1230130:intron | 20.0% |
| !! | AAATTTGACCAAATATATAC+AGG | - | chr8_2:6118668-6118687 | Msa1230130:CDS | 20.0% |
| !! | TGAAAATACCTGTATATATT+TGG | + | chr8_2:6118679-6118698 | None:intergenic | 20.0% |
| !! | TTCCATAAAAGAACATAAAA+AGG | - | chr8_2:6118808-6118827 | Msa1230130:CDS | 20.0% |
| !!! | TTCCTTTTTATGTTCTTTTA+TGG | + | chr8_2:6118813-6118832 | None:intergenic | 20.0% |
| !! | AGAAAAAAAGGAAGAAAAAA+AGG | - | chr8_2:6118859-6118878 | Msa1230130:intron | 20.0% |
| !! | ATGATGAATTTCTATTACTT+TGG | + | chr8_2:6118984-6119003 | None:intergenic | 20.0% |
| !! | AAAGTAATAGAAATTCATCA+TGG | - | chr8_2:6118983-6119002 | Msa1230130:CDS | 20.0% |
| !!! | GTCATTGTATTTTATTTTGT+AGG | - | chr8_2:6117151-6117170 | Msa1230130:CDS | 20.0% |
| !!! | CATTGTATTTTATTTTGTAG+GGG | - | chr8_2:6117153-6117172 | Msa1230130:CDS | 20.0% |
| !!! | TAAGCTTCAAAATTTTCAAA+GGG | + | chr8_2:6117237-6117256 | None:intergenic | 20.0% |
| !!! | ATAAGCTTCAAAATTTTCAA+AGG | + | chr8_2:6117238-6117257 | None:intergenic | 20.0% |
| !!! | TTAAGATTTGAGTTTGATTT+TGG | - | chr8_2:6117378-6117397 | Msa1230130:intron | 20.0% |
| !!! | TTTATGTTTTAAGTGTTAAG+GGG | + | chr8_2:6117524-6117543 | None:intergenic | 20.0% |
| !! | TTTCAATAAGATTCAAAGTT+TGG | - | chr8_2:6117732-6117751 | Msa1230130:intron | 20.0% |
| !! | CAATTTAGATCTATTGAAAA+GGG | + | chr8_2:6117781-6117800 | None:intergenic | 20.0% |
| !!! | AATTTTCCATTCTTAGATAA+AGG | + | chr8_2:6117870-6117889 | None:intergenic | 20.0% |
| !!! | TTATTAAATTTTTACGGCTA+AGG | + | chr8_2:6118022-6118041 | None:intergenic | 20.0% |
| !! | GATGAATTAACAATAATTCT+AGG | + | chr8_2:6118050-6118069 | None:intergenic | 20.0% |
| !!! | GTAATTCTCTTAATTTTGTA+AGG | - | chr8_2:6118072-6118091 | Msa1230130:intron | 20.0% |
| !!! | TAAGATGCTTTTTTTTTTTG+AGG | - | chr8_2:6118190-6118209 | Msa1230130:intron | 20.0% |
| !!! | AAGATGCTTTTTTTTTTTGA+GGG | - | chr8_2:6118191-6118210 | Msa1230130:intron | 20.0% |
| !! | AAATTTGACCAAATATATAC+AGG | - | chr8_2:6118668-6118687 | Msa1230130:CDS | 20.0% |
| !! | TGAAAATACCTGTATATATT+TGG | + | chr8_2:6118679-6118698 | None:intergenic | 20.0% |
| !! | TTCCATAAAAGAACATAAAA+AGG | - | chr8_2:6118808-6118827 | Msa1230130:CDS | 20.0% |
| !!! | TTCCTTTTTATGTTCTTTTA+TGG | + | chr8_2:6118813-6118832 | None:intergenic | 20.0% |
| !! | AGAAAAAAAGGAAGAAAAAA+AGG | - | chr8_2:6118859-6118878 | Msa1230130:intron | 20.0% |
| !! | ATGATGAATTTCTATTACTT+TGG | + | chr8_2:6118984-6119003 | None:intergenic | 20.0% |
| !! | AAAGTAATAGAAATTCATCA+TGG | - | chr8_2:6118983-6119002 | Msa1230130:CDS | 20.0% |
| ! | AAGAAACCCATAAAATCATA+TGG | + | chr8_2:6117081-6117100 | None:intergenic | 25.0% |
| ! | GTAGAAATGAATATTGAGAA+AGG | - | chr8_2:6117184-6117203 | Msa1230130:CDS | 25.0% |
| ! | GCAATTTAGATCTATTGAAA+AGG | + | chr8_2:6117782-6117801 | None:intergenic | 25.0% |
| !!! | AGAATGCGTTTTGAAAATAA+GGG | + | chr8_2:6117817-6117836 | None:intergenic | 25.0% |
| !!! | AAGAATGCGTTTTGAAAATA+AGG | + | chr8_2:6117818-6117837 | None:intergenic | 25.0% |
| ! | AGATATAAGATCAAACACTA+AGG | + | chr8_2:6117940-6117959 | None:intergenic | 25.0% |
| ! | ATTCTCAAATTTCTTGTGAA+TGG | + | chr8_2:6118241-6118260 | None:intergenic | 25.0% |
| ! | AAAGTTAATTTCATTCATGC+AGG | + | chr8_2:6118392-6118411 | None:intergenic | 25.0% |
| ! | CACATCAAACTTAATTAACA+TGG | + | chr8_2:6118645-6118664 | None:intergenic | 25.0% |
| ! | AAAGGAAGAAAAGAAAGAAA+AGG | - | chr8_2:6118826-6118845 | Msa1230130:intron | 25.0% |
| ! | AAGGAAGAAAAGAAAGAAAA+GGG | - | chr8_2:6118827-6118846 | Msa1230130:intron | 25.0% |
| ! | ACGAGATGAGATTAAAATAA+AGG | - | chr8_2:6119012-6119031 | Msa1230130:CDS | 25.0% |
| ! | TAGGAAATAGAACAAGAATT+AGG | + | chr8_2:6119103-6119122 | None:intergenic | 25.0% |
| ! | AAGAAACCCATAAAATCATA+TGG | + | chr8_2:6117081-6117100 | None:intergenic | 25.0% |
| ! | GTAGAAATGAATATTGAGAA+AGG | - | chr8_2:6117184-6117203 | Msa1230130:CDS | 25.0% |
| ! | GCAATTTAGATCTATTGAAA+AGG | + | chr8_2:6117782-6117801 | None:intergenic | 25.0% |
| !!! | AGAATGCGTTTTGAAAATAA+GGG | + | chr8_2:6117817-6117836 | None:intergenic | 25.0% |
| !!! | AAGAATGCGTTTTGAAAATA+AGG | + | chr8_2:6117818-6117837 | None:intergenic | 25.0% |
| ! | AGATATAAGATCAAACACTA+AGG | + | chr8_2:6117940-6117959 | None:intergenic | 25.0% |
| ! | ATTCTCAAATTTCTTGTGAA+TGG | + | chr8_2:6118241-6118260 | None:intergenic | 25.0% |
| ! | AAAGTTAATTTCATTCATGC+AGG | + | chr8_2:6118392-6118411 | None:intergenic | 25.0% |
| ! | CACATCAAACTTAATTAACA+TGG | + | chr8_2:6118645-6118664 | None:intergenic | 25.0% |
| ! | AAAGGAAGAAAAGAAAGAAA+AGG | - | chr8_2:6118826-6118845 | Msa1230130:intron | 25.0% |
| ! | AAGGAAGAAAAGAAAGAAAA+GGG | - | chr8_2:6118827-6118846 | Msa1230130:intron | 25.0% |
| ! | ACGAGATGAGATTAAAATAA+AGG | - | chr8_2:6119012-6119031 | Msa1230130:CDS | 25.0% |
| ! | TAGGAAATAGAACAAGAATT+AGG | + | chr8_2:6119103-6119122 | None:intergenic | 25.0% |
| AGAAGAAAAGAAAGATGAGA+AGG | - | chr8_2:6116902-6116921 | Msa1230130:CDS | 30.0% | |
| GAAGAAAAGAAAGATGAGAA+GGG | - | chr8_2:6116903-6116922 | Msa1230130:CDS | 30.0% | |
| TGAGAAGGGAAAAGATAAAA+AGG | - | chr8_2:6116917-6116936 | Msa1230130:CDS | 30.0% | |
| TATTGAGAAAGGAGAAATCA+AGG | - | chr8_2:6117195-6117214 | Msa1230130:CDS | 30.0% | |
| GCCTAAGGAGATTATTATTA+CGG | - | chr8_2:6117306-6117325 | Msa1230130:intron | 30.0% | |
| TCCGTAATAATAATCTCCTT+AGG | + | chr8_2:6117310-6117329 | None:intergenic | 30.0% | |
| TATTACGGATAAAAAGCCAA+AGG | - | chr8_2:6117321-6117340 | Msa1230130:intron | 30.0% | |
| !! | ATTTGAGTTTGATTTTGGTG+TGG | - | chr8_2:6117383-6117402 | Msa1230130:intron | 30.0% |
| ! | CGATTTTGTTAGAGTGAATT+AGG | + | chr8_2:6117613-6117632 | None:intergenic | 30.0% |
| AAGTATAAAGCATGTCGAAT+AGG | + | chr8_2:6117695-6117714 | None:intergenic | 30.0% | |
| AACACACCTTTATCTAAGAA+TGG | - | chr8_2:6117861-6117880 | Msa1230130:intron | 30.0% | |
| ! | GCTTGATTAATCTACGTTTT+AGG | + | chr8_2:6118530-6118549 | None:intergenic | 30.0% |
| CTCAAAGTCTAATAGTTGAA+GGG | - | chr8_2:6118720-6118739 | Msa1230130:CDS | 30.0% | |
| AAAGGAAGAAAAGAAAGACA+AGG | - | chr8_2:6118877-6118896 | Msa1230130:intron | 30.0% | |
| AAGGAAGAAAAGAAAGACAA+GGG | - | chr8_2:6118878-6118897 | Msa1230130:intron | 30.0% | |
| TTCTCATCACTGAATAATTG+TGG | + | chr8_2:6119079-6119098 | None:intergenic | 30.0% | |
| AGAAGAAAAGAAAGATGAGA+AGG | - | chr8_2:6116902-6116921 | Msa1230130:CDS | 30.0% | |
| GAAGAAAAGAAAGATGAGAA+GGG | - | chr8_2:6116903-6116922 | Msa1230130:CDS | 30.0% | |
| TGAGAAGGGAAAAGATAAAA+AGG | - | chr8_2:6116917-6116936 | Msa1230130:CDS | 30.0% | |
| TATTGAGAAAGGAGAAATCA+AGG | - | chr8_2:6117195-6117214 | Msa1230130:CDS | 30.0% | |
| GCCTAAGGAGATTATTATTA+CGG | - | chr8_2:6117306-6117325 | Msa1230130:intron | 30.0% | |
| TCCGTAATAATAATCTCCTT+AGG | + | chr8_2:6117310-6117329 | None:intergenic | 30.0% | |
| TATTACGGATAAAAAGCCAA+AGG | - | chr8_2:6117321-6117340 | Msa1230130:intron | 30.0% | |
| !! | ATTTGAGTTTGATTTTGGTG+TGG | - | chr8_2:6117383-6117402 | Msa1230130:intron | 30.0% |
| ! | CGATTTTGTTAGAGTGAATT+AGG | + | chr8_2:6117613-6117632 | None:intergenic | 30.0% |
| AAGTATAAAGCATGTCGAAT+AGG | + | chr8_2:6117695-6117714 | None:intergenic | 30.0% | |
| AACACACCTTTATCTAAGAA+TGG | - | chr8_2:6117861-6117880 | Msa1230130:intron | 30.0% | |
| ! | GCTTGATTAATCTACGTTTT+AGG | + | chr8_2:6118530-6118549 | None:intergenic | 30.0% |
| CTCAAAGTCTAATAGTTGAA+GGG | - | chr8_2:6118720-6118739 | Msa1230130:CDS | 30.0% | |
| AAAGGAAGAAAAGAAAGACA+AGG | - | chr8_2:6118877-6118896 | Msa1230130:intron | 30.0% | |
| AAGGAAGAAAAGAAAGACAA+GGG | - | chr8_2:6118878-6118897 | Msa1230130:intron | 30.0% | |
| TTCTCATCACTGAATAATTG+TGG | + | chr8_2:6119079-6119098 | None:intergenic | 30.0% | |
| AACTTGCATTGTCAAGAATG+TGG | - | chr8_2:6116990-6117009 | Msa1230130:CDS | 35.0% | |
| ACTTGCATTGTCAAGAATGT+GGG | - | chr8_2:6116991-6117010 | Msa1230130:CDS | 35.0% | |
| AAGCATCTCTTAACTACTCA+AGG | - | chr8_2:6117026-6117045 | Msa1230130:CDS | 35.0% | |
| AAAGGAGAAATCAAGGCAAA+AGG | - | chr8_2:6117202-6117221 | Msa1230130:CDS | 35.0% | |
| AAGGAGAAATCAAGGCAAAA+GGG | - | chr8_2:6117203-6117222 | Msa1230130:CDS | 35.0% | |
| TAAAAAGCCAAAGGAAGCTA+AGG | - | chr8_2:6117330-6117349 | Msa1230130:intron | 35.0% | |
| AAAAAACTGCAGTCGTTTCT+TGG | + | chr8_2:6117909-6117928 | None:intergenic | 35.0% | |
| CGTAGATTAATCAAGCACAA+AGG | - | chr8_2:6118534-6118553 | Msa1230130:intron | 35.0% | |
| TAGACTTTGAGCTTTCTTGT+CGG | + | chr8_2:6118711-6118730 | None:intergenic | 35.0% | |
| GCTCAAAGTCTAATAGTTGA+AGG | - | chr8_2:6118719-6118738 | Msa1230130:CDS | 35.0% | |
| GGGCAAAGAAGAAGAAAAAA+AGG | - | chr8_2:6118847-6118866 | Msa1230130:intron | 35.0% | |
| AGAAGAAGAAAAGAAGGACA+AGG | - | chr8_2:6118904-6118923 | Msa1230130:intron | 35.0% | |
| GAAGAAGAAAAGAAGGACAA+GGG | - | chr8_2:6118905-6118924 | Msa1230130:intron | 35.0% | |
| AGAAGAAGAAAAGAAGGACA+AGG | - | chr8_2:6118904-6118923 | Msa1230130:intron | 35.0% | |
| GAAGAAGAAAAGAAGGACAA+GGG | - | chr8_2:6118905-6118924 | Msa1230130:intron | 35.0% | |
| AACTTGCATTGTCAAGAATG+TGG | - | chr8_2:6116990-6117009 | Msa1230130:CDS | 35.0% | |
| ACTTGCATTGTCAAGAATGT+GGG | - | chr8_2:6116991-6117010 | Msa1230130:CDS | 35.0% | |
| AAGCATCTCTTAACTACTCA+AGG | - | chr8_2:6117026-6117045 | Msa1230130:CDS | 35.0% | |
| AAAGGAGAAATCAAGGCAAA+AGG | - | chr8_2:6117202-6117221 | Msa1230130:CDS | 35.0% | |
| AAGGAGAAATCAAGGCAAAA+GGG | - | chr8_2:6117203-6117222 | Msa1230130:CDS | 35.0% | |
| TAAAAAGCCAAAGGAAGCTA+AGG | - | chr8_2:6117330-6117349 | Msa1230130:intron | 35.0% | |
| AAAAAACTGCAGTCGTTTCT+TGG | + | chr8_2:6117909-6117928 | None:intergenic | 35.0% | |
| CGTAGATTAATCAAGCACAA+AGG | - | chr8_2:6118534-6118553 | Msa1230130:intron | 35.0% | |
| TAGACTTTGAGCTTTCTTGT+CGG | + | chr8_2:6118711-6118730 | None:intergenic | 35.0% | |
| GCTCAAAGTCTAATAGTTGA+AGG | - | chr8_2:6118719-6118738 | Msa1230130:CDS | 35.0% | |
| GGGCAAAGAAGAAGAAAAAA+AGG | - | chr8_2:6118847-6118866 | Msa1230130:intron | 35.0% | |
| AGAAGAAGAAAAGAAGGACA+AGG | - | chr8_2:6118904-6118923 | Msa1230130:intron | 35.0% | |
| GAAGAAGAAAAGAAGGACAA+GGG | - | chr8_2:6118905-6118924 | Msa1230130:intron | 35.0% | |
| AGAAGAAGAAAAGAAGGACA+AGG | - | chr8_2:6118904-6118923 | Msa1230130:intron | 35.0% | |
| GAAGAAGAAAAGAAGGACAA+GGG | - | chr8_2:6118905-6118924 | Msa1230130:intron | 35.0% | |
| ATCACCAAAAGTGAAGCCTA+AGG | - | chr8_2:6117291-6117310 | Msa1230130:CDS | 40.0% | |
| ! | ATCTCCTTAGGCTTCACTTT+TGG | + | chr8_2:6117298-6117317 | None:intergenic | 40.0% |
| CTTACATCCTTAGCTTCCTT+TGG | + | chr8_2:6117340-6117359 | None:intergenic | 40.0% | |
| TGGATTCGAGCGACTTAATA+TGG | - | chr8_2:6117550-6117569 | Msa1230130:intron | 40.0% | |
| GGATTCGAGCGACTTAATAT+GGG | - | chr8_2:6117551-6117570 | Msa1230130:intron | 40.0% | |
| CATGCATTGTGACAAATGTG+AGG | - | chr8_2:6118500-6118519 | Msa1230130:intron | 40.0% | |
| ! | AAGAGTGCATAGAAATGCAG+AGG | - | chr8_2:6118781-6118800 | Msa1230130:CDS | 40.0% |
| GGGCAAAGAAGAAGAAAAGA+AGG | - | chr8_2:6118898-6118917 | Msa1230130:intron | 40.0% | |
| GGGCAAAGAAGAAGAAAAGA+AGG | - | chr8_2:6118898-6118917 | Msa1230130:intron | 40.0% | |
| ATCACCAAAAGTGAAGCCTA+AGG | - | chr8_2:6117291-6117310 | Msa1230130:CDS | 40.0% | |
| ! | ATCTCCTTAGGCTTCACTTT+TGG | + | chr8_2:6117298-6117317 | None:intergenic | 40.0% |
| CTTACATCCTTAGCTTCCTT+TGG | + | chr8_2:6117340-6117359 | None:intergenic | 40.0% | |
| TGGATTCGAGCGACTTAATA+TGG | - | chr8_2:6117550-6117569 | Msa1230130:intron | 40.0% | |
| GGATTCGAGCGACTTAATAT+GGG | - | chr8_2:6117551-6117570 | Msa1230130:intron | 40.0% | |
| CATGCATTGTGACAAATGTG+AGG | - | chr8_2:6118500-6118519 | Msa1230130:intron | 40.0% | |
| ! | AAGAGTGCATAGAAATGCAG+AGG | - | chr8_2:6118781-6118800 | Msa1230130:CDS | 40.0% |
| GGGCAAAGAAGAAGAAAAGA+AGG | - | chr8_2:6118898-6118917 | Msa1230130:intron | 40.0% | |
| GGGCAAAGAAGAAGAAAAGA+AGG | - | chr8_2:6118898-6118917 | Msa1230130:intron | 40.0% | |
| AAACTGCAGTCGTTTCTTGG+TGG | + | chr8_2:6117906-6117925 | None:intergenic | 45.0% | |
| GCCAATTGTCCGAACTATCA+CGG | - | chr8_2:6118467-6118486 | Msa1230130:intron | 45.0% | |
| ACCGTGATAGTTCGGACAAT+TGG | + | chr8_2:6118471-6118490 | None:intergenic | 45.0% | |
| GAACCTTCACCGTGATAGTT+CGG | + | chr8_2:6118479-6118498 | None:intergenic | 45.0% | |
| !! | AGTTGAAGGGAGCATTGAAG+TGG | - | chr8_2:6118733-6118752 | Msa1230130:CDS | 45.0% |
| AAGAAGGACAAGGGCAAAGA+AGG | - | chr8_2:6118914-6118933 | Msa1230130:intron | 45.0% | |
| AAACTGCAGTCGTTTCTTGG+TGG | + | chr8_2:6117906-6117925 | None:intergenic | 45.0% | |
| GCCAATTGTCCGAACTATCA+CGG | - | chr8_2:6118467-6118486 | Msa1230130:intron | 45.0% | |
| ACCGTGATAGTTCGGACAAT+TGG | + | chr8_2:6118471-6118490 | None:intergenic | 45.0% | |
| GAACCTTCACCGTGATAGTT+CGG | + | chr8_2:6118479-6118498 | None:intergenic | 45.0% | |
| !! | AGTTGAAGGGAGCATTGAAG+TGG | - | chr8_2:6118733-6118752 | Msa1230130:CDS | 45.0% |
| AAGAAGGACAAGGGCAAAGA+AGG | - | chr8_2:6118914-6118933 | Msa1230130:intron | 45.0% | |
| !!! | AATTAACTTTAAATTAATTT+TGG | - | chr8_2:6118402-6118421 | Msa1230130:intron | 5.0% |
| !!! | ATTAACTTTAAATTAATTTT+GGG | - | chr8_2:6118403-6118422 | Msa1230130:intron | 5.0% |
| !!! | AATTAACTTTAAATTAATTT+TGG | - | chr8_2:6118402-6118421 | Msa1230130:intron | 5.0% |
| !!! | ATTAACTTTAAATTAATTTT+GGG | - | chr8_2:6118403-6118422 | Msa1230130:intron | 5.0% |
| !! | TTTTGGTGTGGCCGTAACTC+AGG | - | chr8_2:6117395-6117414 | Msa1230130:intron | 50.0% |
| ! | TTTGGTGTGGCCGTAACTCA+GGG | - | chr8_2:6117396-6117415 | Msa1230130:intron | 50.0% |
| TGTCCGAACTATCACGGTGA+AGG | - | chr8_2:6118473-6118492 | Msa1230130:intron | 50.0% | |
| !! | TTTTGGTGTGGCCGTAACTC+AGG | - | chr8_2:6117395-6117414 | Msa1230130:intron | 50.0% |
| ! | TTTGGTGTGGCCGTAACTCA+GGG | - | chr8_2:6117396-6117415 | Msa1230130:intron | 50.0% |
| TGTCCGAACTATCACGGTGA+AGG | - | chr8_2:6118473-6118492 | Msa1230130:intron | 50.0% | |
| TTGGTGTGGCCGTAACTCAG+GGG | - | chr8_2:6117397-6117416 | Msa1230130:intron | 55.0% | |
| TCCTCCCTTCCCCTGAGTTA+CGG | + | chr8_2:6117409-6117428 | None:intergenic | 55.0% | |
| !! | CAGTCGTTTCTTGGTGGTGG+TGG | + | chr8_2:6117900-6117919 | None:intergenic | 55.0% |
| CTGCAGTCGTTTCTTGGTGG+TGG | + | chr8_2:6117903-6117922 | None:intergenic | 55.0% | |
| TTGGTGTGGCCGTAACTCAG+GGG | - | chr8_2:6117397-6117416 | Msa1230130:intron | 55.0% | |
| TCCTCCCTTCCCCTGAGTTA+CGG | + | chr8_2:6117409-6117428 | None:intergenic | 55.0% | |
| !! | CAGTCGTTTCTTGGTGGTGG+TGG | + | chr8_2:6117900-6117919 | None:intergenic | 55.0% |
| CTGCAGTCGTTTCTTGGTGG+TGG | + | chr8_2:6117903-6117922 | None:intergenic | 55.0% | |
| TGTGGCCGTAACTCAGGGGA+AGG | - | chr8_2:6117401-6117420 | Msa1230130:intron | 60.0% | |
| GTGGCCGTAACTCAGGGGAA+GGG | - | chr8_2:6117402-6117421 | Msa1230130:intron | 60.0% | |
| TGTGGCCGTAACTCAGGGGA+AGG | - | chr8_2:6117401-6117420 | Msa1230130:intron | 60.0% | |
| GTGGCCGTAACTCAGGGGAA+GGG | - | chr8_2:6117402-6117421 | Msa1230130:intron | 60.0% | |
| GCCGTAACTCAGGGGAAGGG+AGG | - | chr8_2:6117405-6117424 | Msa1230130:intron | 65.0% | |
| GCCGTAACTCAGGGGAAGGG+AGG | - | chr8_2:6117405-6117424 | Msa1230130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 6116888 | 6119123 | 6116888 | ID=Msa1230130;Name=Msa1230130 |
| chr8_2 | mRNA | 6116888 | 6119123 | 6116888 | ID=Msa1230130-mRNA-1;Parent=Msa1230130;Name=Msa1230130-mRNA-1;_AED=0.36;_eAED=0.41;_QI=0|0.66|0.25|1|1|1|4|0|287 |
| chr8_2 | exon | 6118964 | 6119123 | 6118964 | ID=Msa1230130-mRNA-1:exon:2267;Parent=Msa1230130-mRNA-1 |
| chr8_2 | exon | 6118657 | 6118838 | 6118657 | ID=Msa1230130-mRNA-1:exon:2266;Parent=Msa1230130-mRNA-1 |
| chr8_2 | exon | 6117456 | 6117543 | 6117456 | ID=Msa1230130-mRNA-1:exon:2265;Parent=Msa1230130-mRNA-1 |
| chr8_2 | exon | 6116888 | 6117321 | 6116888 | ID=Msa1230130-mRNA-1:exon:2264;Parent=Msa1230130-mRNA-1 |
| chr8_2 | CDS | 6118964 | 6119123 | 6118964 | ID=Msa1230130-mRNA-1:cds;Parent=Msa1230130-mRNA-1 |
| chr8_2 | CDS | 6118657 | 6118838 | 6118657 | ID=Msa1230130-mRNA-1:cds;Parent=Msa1230130-mRNA-1 |
| chr8_2 | CDS | 6117456 | 6117543 | 6117456 | ID=Msa1230130-mRNA-1:cds;Parent=Msa1230130-mRNA-1 |
| chr8_2 | CDS | 6116888 | 6117321 | 6116888 | ID=Msa1230130-mRNA-1:cds;Parent=Msa1230130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
