Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592270 | XP_003604990.1 | 99.363 | 157 | 1 | 0 | 1 | 157 | 63 | 219 | 8.36e-110 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592270 | sp|Q9MAS5|VA726_ARATH | 78.981 | 157 | 33 | 0 | 1 | 157 | 63 | 219 | 9.43e-87 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024400 | Msa0592270 | 0.809645 | 1.707866e-50 | -8.615850e-47 |
| Msa0028930 | Msa0592270 | 0.802026 | 6.818166e-49 | -8.615850e-47 |
| Msa0030160 | Msa0592270 | 0.804726 | 1.881482e-49 | -8.615850e-47 |
| Msa0032470 | Msa0592270 | 0.808022 | 3.797831e-50 | -8.615850e-47 |
| Msa0053860 | Msa0592270 | 0.823638 | 1.243437e-53 | -8.615850e-47 |
| Msa0065680 | Msa0592270 | -0.803696 | 3.081884e-49 | -8.615850e-47 |
| Msa0072720 | Msa0592270 | 0.828435 | 9.005848e-55 | -8.615850e-47 |
| Msa0090570 | Msa0592270 | 0.815412 | 9.368904e-52 | -8.615850e-47 |
| Msa0103770 | Msa0592270 | 0.802544 | 5.335141e-49 | -8.615850e-47 |
| Msa0104670 | Msa0592270 | 0.807877 | 4.077676e-50 | -8.615850e-47 |
| Msa0106620 | Msa0592270 | 0.834640 | 2.665982e-56 | -8.615850e-47 |
| Msa0106710 | Msa0592270 | 0.841732 | 3.974541e-58 | -8.615850e-47 |
| Msa0116640 | Msa0592270 | -0.811611 | 6.421617e-51 | -8.615850e-47 |
| Msa0116730 | Msa0592270 | -0.806143 | 9.491386e-50 | -8.615850e-47 |
| Msa0124320 | Msa0592270 | 0.804897 | 1.732668e-49 | -8.615850e-47 |
| Msa0130720 | Msa0592270 | 0.815518 | 8.872093e-52 | -8.615850e-47 |
| Msa0138020 | Msa0592270 | 0.801852 | 7.403670e-49 | -8.615850e-47 |
| Msa0139670 | Msa0592270 | 0.842109 | 3.160374e-58 | -8.615850e-47 |
| Msa0140500 | Msa0592270 | -0.810773 | 9.756932e-51 | -8.615850e-47 |
| Msa0144530 | Msa0592270 | 0.805008 | 1.642453e-49 | -8.615850e-47 |
| Msa0150230 | Msa0592270 | 0.812218 | 4.734185e-51 | -8.615850e-47 |
| Msa0150860 | Msa0592270 | 0.809660 | 1.695427e-50 | -8.615850e-47 |
| Msa0152560 | Msa0592270 | 0.807600 | 4.670284e-50 | -8.615850e-47 |
| Msa0154840 | Msa0592270 | -0.800977 | 1.118761e-48 | -8.615850e-47 |
| Msa0160960 | Msa0592270 | 0.818450 | 1.948147e-52 | -8.615850e-47 |
| Msa0163510 | Msa0592270 | 0.821866 | 3.214805e-53 | -8.615850e-47 |
| Msa0167980 | Msa0592270 | 0.804226 | 2.391901e-49 | -8.615850e-47 |
| Msa0171870 | Msa0592270 | 0.800883 | 1.169621e-48 | -8.615850e-47 |
| Msa0173800 | Msa0592270 | 0.809817 | 1.568309e-50 | -8.615850e-47 |
| Msa0183850 | Msa0592270 | 0.810767 | 9.785289e-51 | -8.615850e-47 |
| Msa0186950 | Msa0592270 | 0.803869 | 2.836549e-49 | -8.615850e-47 |
| Msa0189040 | Msa0592270 | 0.835082 | 2.063901e-56 | -8.615850e-47 |
| Msa0192640 | Msa0592270 | 0.817241 | 3.651639e-52 | -8.615850e-47 |
| Msa0202410 | Msa0592270 | 0.808472 | 3.045430e-50 | -8.615850e-47 |
| Msa0204960 | Msa0592270 | 0.823885 | 1.088390e-53 | -8.615850e-47 |
| Msa0205010 | Msa0592270 | 0.818431 | 1.967770e-52 | -8.615850e-47 |
| Msa0207350 | Msa0592270 | 0.817804 | 2.726886e-52 | -8.615850e-47 |
| Msa0217670 | Msa0592270 | 0.808077 | 3.697940e-50 | -8.615850e-47 |
| Msa0217700 | Msa0592270 | 0.817728 | 2.836152e-52 | -8.615850e-47 |
| Msa0220730 | Msa0592270 | 0.810198 | 1.298553e-50 | -8.615850e-47 |
| Msa0223340 | Msa0592270 | 0.815898 | 7.300994e-52 | -8.615850e-47 |
| Msa0231190 | Msa0592270 | 0.806268 | 8.933435e-50 | -8.615850e-47 |
| Msa0232020 | Msa0592270 | 0.817575 | 3.071755e-52 | -8.615850e-47 |
| Msa0234090 | Msa0592270 | 0.814946 | 1.189198e-51 | -8.615850e-47 |
| Msa0237210 | Msa0592270 | 0.807409 | 5.127672e-50 | -8.615850e-47 |
| Msa0367870 | Msa0592270 | 0.800233 | 1.586540e-48 | -8.615850e-47 |
| Msa0381610 | Msa0592270 | -0.810970 | 8.845353e-51 | -8.615850e-47 |
| Msa0382370 | Msa0592270 | 0.868756 | 5.152662e-66 | -8.615850e-47 |
| Msa0385500 | Msa0592270 | 0.816947 | 4.252606e-52 | -8.615850e-47 |
| Msa0389210 | Msa0592270 | 0.816419 | 5.585676e-52 | -8.615850e-47 |
| Msa0395980 | Msa0592270 | 0.807418 | 5.105028e-50 | -8.615850e-47 |
| Msa0403770 | Msa0592270 | 0.825980 | 3.486386e-54 | -8.615850e-47 |
| Msa0427100 | Msa0592270 | 0.801466 | 8.887769e-49 | -8.615850e-47 |
| Msa0427120 | Msa0592270 | 0.806431 | 8.252804e-50 | -8.615850e-47 |
| Msa0432160 | Msa0592270 | 0.864923 | 8.570616e-65 | -8.615850e-47 |
| Msa0450400 | Msa0592270 | -0.842183 | 3.021403e-58 | -8.615850e-47 |
| Msa0458740 | Msa0592270 | 0.810195 | 1.300578e-50 | -8.615850e-47 |
| Msa0460590 | Msa0592270 | 0.837486 | 5.052359e-57 | -8.615850e-47 |
| Msa0467100 | Msa0592270 | 0.800952 | 1.132165e-48 | -8.615850e-47 |
| Msa0468410 | Msa0592270 | 0.804230 | 2.386456e-49 | -8.615850e-47 |
| Msa0473330 | Msa0592270 | 0.814168 | 1.767221e-51 | -8.615850e-47 |
| Msa0476680 | Msa0592270 | 0.867962 | 9.293734e-66 | -8.615850e-47 |
| Msa0481970 | Msa0592270 | 0.825237 | 5.231071e-54 | -8.615850e-47 |
| Msa0240900 | Msa0592270 | 0.824347 | 8.477381e-54 | -8.615850e-47 |
| Msa0241140 | Msa0592270 | 0.837258 | 5.780814e-57 | -8.615850e-47 |
| Msa0241830 | Msa0592270 | 0.808912 | 2.452364e-50 | -8.615850e-47 |
| Msa0257490 | Msa0592270 | 0.844298 | 8.245595e-59 | -8.615850e-47 |
| Msa0259210 | Msa0592270 | 0.841937 | 3.508632e-58 | -8.615850e-47 |
| Msa0259220 | Msa0592270 | 0.808709 | 2.710879e-50 | -8.615850e-47 |
| Msa0259230 | Msa0592270 | 0.816950 | 4.245934e-52 | -8.615850e-47 |
| Msa0274980 | Msa0592270 | 0.808019 | 3.803860e-50 | -8.615850e-47 |
| Msa0278570 | Msa0592270 | 0.845997 | 2.863300e-59 | -8.615850e-47 |
| Msa0278580 | Msa0592270 | 0.810640 | 1.042238e-50 | -8.615850e-47 |
| Msa0281530 | Msa0592270 | 0.825731 | 3.993834e-54 | -8.615850e-47 |
| Msa0296790 | Msa0592270 | 0.838782 | 2.343369e-57 | -8.615850e-47 |
| Msa0296820 | Msa0592270 | 0.806654 | 7.407068e-50 | -8.615850e-47 |
| Msa0308630 | Msa0592270 | 0.808262 | 3.376121e-50 | -8.615850e-47 |
| Msa0312910 | Msa0592270 | 0.810806 | 9.597933e-51 | -8.615850e-47 |
| Msa0315690 | Msa0592270 | 0.817184 | 3.761972e-52 | -8.615850e-47 |
| Msa0317970 | Msa0592270 | 0.853965 | 1.685885e-61 | -8.615850e-47 |
| Msa0320590 | Msa0592270 | 0.814936 | 1.195030e-51 | -8.615850e-47 |
| Msa0321690 | Msa0592270 | 0.812356 | 4.417180e-51 | -8.615850e-47 |
| Msa0322240 | Msa0592270 | 0.810710 | 1.006688e-50 | -8.615850e-47 |
| Msa0322900 | Msa0592270 | 0.812582 | 3.942506e-51 | -8.615850e-47 |
| Msa0336300 | Msa0592270 | 0.830043 | 3.667443e-55 | -8.615850e-47 |
| Msa0336310 | Msa0592270 | 0.806948 | 6.420027e-50 | -8.615850e-47 |
| Msa0336320 | Msa0592270 | 0.829861 | 4.060880e-55 | -8.615850e-47 |
| Msa0339910 | Msa0592270 | 0.806906 | 6.552952e-50 | -8.615850e-47 |
| Msa0343850 | Msa0592270 | 0.806374 | 8.484727e-50 | -8.615850e-47 |
| Msa0363790 | Msa0592270 | 0.803344 | 3.646138e-49 | -8.615850e-47 |
| Msa0482940 | Msa0592270 | 0.816363 | 5.748229e-52 | -8.615850e-47 |
| Msa0485240 | Msa0592270 | 0.813414 | 2.591484e-51 | -8.615850e-47 |
| Msa0491000 | Msa0592270 | 0.824211 | 9.124585e-54 | -8.615850e-47 |
| Msa0517640 | Msa0592270 | 0.804149 | 2.481425e-49 | -8.615850e-47 |
| Msa0521010 | Msa0592270 | 0.869112 | 3.950623e-66 | -8.615850e-47 |
| Msa0527540 | Msa0592270 | 0.818568 | 1.831738e-52 | -8.615850e-47 |
| Msa0534050 | Msa0592270 | 0.813148 | 2.964012e-51 | -8.615850e-47 |
| Msa0547160 | Msa0592270 | 0.813874 | 2.052351e-51 | -8.615850e-47 |
| Msa0581400 | Msa0592270 | 0.813309 | 2.732686e-51 | -8.615850e-47 |
| Msa0583360 | Msa0592270 | -0.804658 | 1.943589e-49 | -8.615850e-47 |
| Msa0592150 | Msa0592270 | 0.803824 | 2.899262e-49 | -8.615850e-47 |
| Msa0592270 | Msa0592290 | 0.808962 | 2.393214e-50 | -8.615850e-47 |
| Msa0592270 | Msa0592330 | 0.805082 | 1.584664e-49 | -8.615850e-47 |
| Msa0592270 | Msa0594050 | 0.806361 | 8.538368e-50 | -8.615850e-47 |
| Msa0592270 | Msa0600080 | 0.800278 | 1.553653e-48 | -8.615850e-47 |
| Msa0592270 | Msa0604290 | 0.815622 | 8.411194e-52 | -8.615850e-47 |
| Msa0592270 | Msa0613110 | 0.833862 | 4.179777e-56 | -8.615850e-47 |
| Msa0592270 | Msa0616450 | 0.801201 | 1.006671e-48 | -8.615850e-47 |
| Msa0592270 | Msa0623990 | 0.802991 | 4.313559e-49 | -8.615850e-47 |
| Msa0592270 | Msa0624060 | 0.807620 | 4.623798e-50 | -8.615850e-47 |
| Msa0592270 | Msa0629240 | 0.819372 | 1.202431e-52 | -8.615850e-47 |
| Msa0592270 | Msa0632420 | 0.814218 | 1.722882e-51 | -8.615850e-47 |
| Msa0592270 | Msa0651560 | 0.803876 | 2.827778e-49 | -8.615850e-47 |
| Msa0592270 | Msa0655920 | 0.815806 | 7.652936e-52 | -8.615850e-47 |
| Msa0592270 | Msa0672550 | 0.809967 | 1.456299e-50 | -8.615850e-47 |
| Msa0592270 | Msa0682680 | 0.803315 | 3.696003e-49 | -8.615850e-47 |
| Msa0592270 | Msa0703440 | 0.802805 | 4.712158e-49 | -8.615850e-47 |
| Msa0592270 | Msa0705990 | 0.801852 | 7.404120e-49 | -8.615850e-47 |
| Msa0592270 | Msa0709120 | 0.841986 | 3.406166e-58 | -8.615850e-47 |
| Msa0592270 | Msa0711150 | 0.820748 | 5.821729e-53 | -8.615850e-47 |
| Msa0592270 | Msa0724170 | 0.803227 | 3.855622e-49 | -8.615850e-47 |
| Msa0592270 | Msa0741440 | 0.808057 | 3.734498e-50 | -8.615850e-47 |
| Msa0592270 | Msa0746170 | 0.806172 | 9.361230e-50 | -8.615850e-47 |
| Msa0592270 | Msa0746210 | 0.809852 | 1.541386e-50 | -8.615850e-47 |
| Msa0592270 | Msa0749440 | 0.803946 | 2.734744e-49 | -8.615850e-47 |
| Msa0592270 | Msa0751850 | 0.806278 | 8.888662e-50 | -8.615850e-47 |
| Msa0592270 | Msa0763920 | 0.809147 | 2.184095e-50 | -8.615850e-47 |
| Msa0592270 | Msa0784480 | 0.825480 | 4.581404e-54 | -8.615850e-47 |
| Msa0592270 | Msa0786750 | 0.822175 | 2.726500e-53 | -8.615850e-47 |
| Msa0592270 | Msa0797250 | 0.814352 | 1.609410e-51 | -8.615850e-47 |
| Msa0592270 | Msa0822500 | 0.842189 | 3.010692e-58 | -8.615850e-47 |
| Msa0592270 | Msa0830660 | 0.803106 | 4.083278e-49 | -8.615850e-47 |
| Msa0592270 | Msa0832340 | 0.800292 | 1.543324e-48 | -8.615850e-47 |
| Msa0592270 | Msa0844110 | 0.801898 | 7.244474e-49 | -8.615850e-47 |
| Msa0592270 | Msa0855870 | 0.831011 | 2.125967e-55 | -8.615850e-47 |
| Msa0592270 | Msa0867870 | 0.802416 | 5.669332e-49 | -8.615850e-47 |
| Msa0592270 | Msa0878220 | 0.803411 | 3.531001e-49 | -8.615850e-47 |
| Msa0592270 | Msa0894710 | 0.844934 | 5.558323e-59 | -8.615850e-47 |
| Msa0592270 | Msa0902830 | 0.805348 | 1.394094e-49 | -8.615850e-47 |
| Msa0592270 | Msa0903780 | 0.811625 | 6.374145e-51 | -8.615850e-47 |
| Msa0592270 | Msa0921420 | 0.827179 | 1.804541e-54 | -8.615850e-47 |
| Msa0592270 | Msa0933760 | 0.810499 | 1.118398e-50 | -8.615850e-47 |
| Msa0592270 | Msa0934140 | 0.844557 | 7.020999e-59 | -8.615850e-47 |
| Msa0592270 | Msa0936390 | 0.808837 | 2.545581e-50 | -8.615850e-47 |
| Msa0592270 | Msa0943970 | 0.807604 | 4.660741e-50 | -8.615850e-47 |
| Msa0592270 | Msa0960390 | 0.820892 | 5.393518e-53 | -8.615850e-47 |
| Msa0592270 | Msa0974950 | 0.814587 | 1.428350e-51 | -8.615850e-47 |
| Msa0592270 | Msa0985180 | 0.812918 | 3.328328e-51 | -8.615850e-47 |
| Msa0592270 | Msa0986510 | 0.813570 | 2.394554e-51 | -8.615850e-47 |
| Msa0592270 | Msa1002960 | 0.800008 | 1.762852e-48 | -8.615850e-47 |
| Msa0592270 | Msa1006010 | -0.812217 | 4.738807e-51 | -8.615850e-47 |
| Msa0592270 | Msa1011090 | 0.830255 | 3.254862e-55 | -8.615850e-47 |
| Msa0592270 | Msa1024680 | 0.825502 | 4.527392e-54 | -8.615850e-47 |
| Msa0592270 | Msa1034500 | 0.837475 | 5.086903e-57 | -8.615850e-47 |
| Msa0592270 | Msa1036610 | 0.823165 | 1.604422e-53 | -8.615850e-47 |
| Msa0592270 | Msa1037520 | 0.807326 | 5.339358e-50 | -8.615850e-47 |
| Msa0592270 | Msa1048220 | 0.800600 | 1.335494e-48 | -8.615850e-47 |
| Msa0592270 | Msa1063420 | 0.834254 | 3.333366e-56 | -8.615850e-47 |
| Msa0592270 | Msa1089450 | 0.841735 | 3.966732e-58 | -8.615850e-47 |
| Msa0592270 | Msa1100130 | -0.812762 | 3.600776e-51 | -8.615850e-47 |
| Msa0592270 | Msa1104560 | 0.805107 | 1.566223e-49 | -8.615850e-47 |
| Msa0592270 | Msa1130400 | 0.802515 | 5.409887e-49 | -8.615850e-47 |
| Msa0592270 | Msa1163730 | 0.810924 | 9.050579e-51 | -8.615850e-47 |
| Msa0592270 | Msa1168550 | 0.813467 | 2.522785e-51 | -8.615850e-47 |
| Msa0592270 | Msa1168590 | 0.803659 | 3.136707e-49 | -8.615850e-47 |
| Msa0592270 | Msa1175200 | 0.828111 | 1.078265e-54 | -8.615850e-47 |
| Msa0592270 | Msa1178580 | 0.823376 | 1.431806e-53 | -8.615850e-47 |
| Msa0592270 | Msa1209440 | 0.810898 | 9.167619e-51 | -8.615850e-47 |
| Msa0592270 | Msa1211230 | -0.826535 | 2.572348e-54 | -8.615850e-47 |
| Msa0592270 | Msa1211420 | -0.817307 | 3.528592e-52 | -8.615850e-47 |
| Msa0592270 | Msa1221330 | 0.815138 | 1.077908e-51 | -8.615850e-47 |
| Msa0592270 | Msa1225860 | -0.806725 | 7.154972e-50 | -8.615850e-47 |
| Msa0592270 | Msa1226270 | 0.805391 | 1.365404e-49 | -8.615850e-47 |
| Msa0592270 | Msa1228040 | 0.804629 | 1.970987e-49 | -8.615850e-47 |
| Msa0592270 | Msa1230130 | 0.801081 | 1.065575e-48 | -8.615850e-47 |
| Msa0592270 | Msa1234620 | 0.822712 | 2.046099e-53 | -8.615850e-47 |
| Msa0592270 | Msa1243870 | 0.829074 | 6.307486e-55 | -8.615850e-47 |
| Msa0592270 | Msa1246360 | 0.804518 | 2.079270e-49 | -8.615850e-47 |
| Msa0592270 | Msa1264420 | 0.814669 | 1.369723e-51 | -8.615850e-47 |
| Msa0592270 | Msa1265280 | 0.845119 | 4.953145e-59 | -8.615850e-47 |
| Msa0592270 | Msa1270660 | 0.813732 | 2.205008e-51 | -8.615850e-47 |
| Msa0592270 | Msa1271130 | 0.858044 | 1.079360e-62 | -8.615850e-47 |
| Msa0592270 | Msa1276150 | 0.821588 | 3.728511e-53 | -8.615850e-47 |
| Msa0592270 | Msa1299400 | -0.813569 | 2.395449e-51 | -8.615850e-47 |
| Msa0592270 | Msa1307180 | 0.814263 | 1.684251e-51 | -8.615850e-47 |
| Msa0592270 | Msa1313320 | 0.805582 | 1.245414e-49 | -8.615850e-47 |
| Msa0592270 | Msa1315580 | 0.817771 | 2.774257e-52 | -8.615850e-47 |
| Msa0592270 | Msa1316360 | 0.811952 | 5.412483e-51 | -8.615850e-47 |
| Msa0592270 | Msa1325410 | -0.820409 | 6.965346e-53 | -8.615850e-47 |
| Msa0592270 | Msa1329050 | -0.804066 | 2.582355e-49 | -8.615850e-47 |
| Msa0592270 | Msa1331050 | -0.822634 | 2.133046e-53 | -8.615850e-47 |
| Msa0592270 | Msa1332050 | 0.814691 | 1.354035e-51 | -8.615850e-47 |
| Msa0592270 | Msa1337480 | 0.849565 | 2.981047e-60 | -8.615850e-47 |
| Msa0592270 | Msa1340200 | 0.801836 | 7.461937e-49 | -8.615850e-47 |
| Msa0592270 | Msa1345810 | 0.820375 | 7.090652e-53 | -8.615850e-47 |
| Msa0592270 | Msa1346840 | 0.815718 | 8.007770e-52 | -8.615850e-47 |
| Msa0592270 | Msa1369690 | 0.828629 | 8.083865e-55 | -8.615850e-47 |
| Msa0592270 | Msa1370590 | 0.813471 | 2.517005e-51 | -8.615850e-47 |
| Msa0592270 | Msa1371940 | 0.801472 | 8.862017e-49 | -8.615850e-47 |
| Msa0592270 | Msa1378410 | 0.807950 | 3.935176e-50 | -8.615850e-47 |
| Msa0592270 | Msa1380220 | 0.804213 | 2.406489e-49 | -8.615850e-47 |
| Msa0592270 | Msa1384100 | 0.816795 | 4.598891e-52 | -8.615850e-47 |
| Msa0592270 | Msa1390680 | 0.831200 | 1.910123e-55 | -8.615850e-47 |
| Msa0592270 | Msa1390700 | 0.828147 | 1.056647e-54 | -8.615850e-47 |
| Msa0592270 | Msa1392890 | 0.830355 | 3.077655e-55 | -8.615850e-47 |
| Msa0592270 | Msa1392900 | 0.804632 | 1.967601e-49 | -8.615850e-47 |
| Msa0592270 | Msa1392910 | 0.836157 | 1.103245e-56 | -8.615850e-47 |
| Msa0592270 | Msa1393840 | -0.806614 | 7.550629e-50 | -8.615850e-47 |
| Msa0592270 | Msa1407190 | 0.821605 | 3.693486e-53 | -8.615850e-47 |
| Msa0592270 | Msa1410420 | 0.801305 | 9.588797e-49 | -8.615850e-47 |
| Msa0592270 | Msa1410550 | 0.800170 | 1.634035e-48 | -8.615850e-47 |
| Msa0592270 | Msa1416370 | 0.802340 | 5.875821e-49 | -8.615850e-47 |
| Msa0592270 | Msa1418240 | 0.812314 | 4.513096e-51 | -8.615850e-47 |
| Msa0592270 | Msa1423780 | 0.802433 | 5.623479e-49 | -8.615850e-47 |
| Msa0592270 | Msa1424350 | 0.807612 | 4.643036e-50 | -8.615850e-47 |
| Msa0592270 | Msa1432130 | 0.821263 | 4.431538e-53 | -8.615850e-47 |
| Msa0592270 | Msa1442920 | 0.807177 | 5.741646e-50 | -8.615850e-47 |
| Msa0592270 | Msa1444120 | 0.818490 | 1.907553e-52 | -8.615850e-47 |
| Msa0592270 | Msa1444510 | 0.806277 | 8.892504e-50 | -8.615850e-47 |
| Msa0592270 | Msa1445390 | -0.809586 | 1.758371e-50 | -8.615850e-47 |
| Msa0592270 | Msa1446080 | 0.814632 | 1.395275e-51 | -8.615850e-47 |
| Msa0592270 | Msa1449340 | -0.802746 | 4.847474e-49 | -8.615850e-47 |
| Msa0592270 | Msa1454530 | 0.806040 | 9.976942e-50 | -8.615850e-47 |
| Msa0592270 | Msa1456230 | 0.817126 | 3.875644e-52 | -8.615850e-47 |
| Msa0592270 | Msa1465570 | 0.822309 | 2.538232e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592270 | MtrunA17_Chr4g0010271 | 99.363 | 157 | 1 | 0 | 1 | 157 | 63 | 219 | 7.69e-114 | 321 |
| Msa0592270 | MtrunA17_Chr1g0169861 | 76.433 | 157 | 37 | 0 | 1 | 157 | 113 | 269 | 5.11e-92 | 268 |
| Msa0592270 | MtrunA17_Chr7g0237561 | 84.713 | 157 | 24 | 0 | 1 | 157 | 63 | 219 | 5.22e-85 | 248 |
| Msa0592270 | MtrunA17_Chr2g0296021 | 71.154 | 156 | 45 | 0 | 2 | 157 | 64 | 219 | 3.59e-82 | 241 |
| Msa0592270 | MtrunA17_Chr4g0043521 | 81.061 | 132 | 25 | 0 | 2 | 133 | 66 | 197 | 8.98e-79 | 233 |
| Msa0592270 | MtrunA17_Chr2g0291651 | 76.515 | 132 | 31 | 0 | 2 | 133 | 68 | 199 | 3.21e-75 | 223 |
| Msa0592270 | MtrunA17_Chr7g0237521 | 75.940 | 133 | 32 | 0 | 1 | 133 | 63 | 195 | 1.03e-72 | 217 |
| Msa0592270 | MtrunA17_Chr4g0010211 | 95.370 | 108 | 5 | 0 | 2 | 109 | 3 | 110 | 2.47e-72 | 212 |
| Msa0592270 | MtrunA17_Chr1g0169851 | 70.714 | 140 | 26 | 1 | 1 | 125 | 14 | 153 | 2.28e-70 | 209 |
| Msa0592270 | MtrunA17_Chr1g0210521 | 52.273 | 176 | 65 | 1 | 1 | 157 | 63 | 238 | 1.14e-63 | 195 |
| Msa0592270 | MtrunA17_Chr5g0441741 | 40.000 | 155 | 89 | 3 | 1 | 154 | 61 | 212 | 1.13e-34 | 120 |
| Msa0592270 | MtrunA17_Chr4g0064371 | 33.766 | 154 | 100 | 2 | 1 | 154 | 65 | 216 | 2.16e-31 | 112 |
| Msa0592270 | MtrunA17_Chr4g0026121 | 33.974 | 156 | 101 | 2 | 1 | 156 | 61 | 214 | 3.40e-29 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0592270 | AT1G04760.2 | 78.981 | 157 | 33 | 0 | 1 | 157 | 63 | 219 | 9.58e-88 | 256 |
| Msa0592270 | AT1G04760.1 | 78.981 | 157 | 33 | 0 | 1 | 157 | 63 | 219 | 9.58e-88 | 256 |
| Msa0592270 | AT1G04750.1 | 84.076 | 157 | 25 | 0 | 1 | 157 | 63 | 219 | 8.62e-86 | 251 |
| Msa0592270 | AT2G32670.1 | 82.803 | 157 | 27 | 0 | 1 | 157 | 128 | 284 | 3.27e-85 | 251 |
| Msa0592270 | AT2G33120.1 | 83.439 | 157 | 26 | 0 | 1 | 157 | 63 | 219 | 6.05e-85 | 248 |
| Msa0592270 | AT2G33120.2 | 82.803 | 157 | 27 | 0 | 1 | 157 | 71 | 227 | 2.21e-84 | 247 |
| Msa0592270 | AT1G04750.2 | 84.397 | 141 | 22 | 0 | 17 | 157 | 1 | 141 | 1.84e-75 | 222 |
| Msa0592270 | AT1G04750.4 | 84.397 | 141 | 22 | 0 | 17 | 157 | 1 | 141 | 1.84e-75 | 222 |
| Msa0592270 | AT1G04750.3 | 84.397 | 141 | 22 | 0 | 17 | 157 | 1 | 141 | 1.84e-75 | 222 |
| Msa0592270 | AT3G54300.3 | 52.273 | 176 | 65 | 2 | 1 | 157 | 63 | 238 | 1.40e-61 | 190 |
| Msa0592270 | AT3G54300.2 | 52.273 | 176 | 65 | 2 | 1 | 157 | 63 | 238 | 1.40e-61 | 190 |
| Msa0592270 | AT3G54300.1 | 52.273 | 176 | 65 | 2 | 1 | 157 | 63 | 238 | 1.40e-61 | 190 |
| Msa0592270 | AT2G33110.1 | 66.242 | 157 | 49 | 1 | 1 | 157 | 63 | 215 | 3.73e-58 | 181 |
| Msa0592270 | AT4G15780.1 | 69.298 | 114 | 35 | 0 | 3 | 116 | 66 | 179 | 7.57e-55 | 171 |
| Msa0592270 | AT2G33110.2 | 68.000 | 100 | 32 | 0 | 1 | 100 | 63 | 162 | 5.90e-46 | 149 |
| Msa0592270 | AT5G11150.1 | 43.038 | 158 | 84 | 5 | 1 | 156 | 62 | 215 | 2.74e-38 | 130 |
| Msa0592270 | AT5G11150.2 | 43.038 | 158 | 84 | 5 | 1 | 156 | 62 | 215 | 3.93e-38 | 130 |
| Msa0592270 | AT2G33120.3 | 88.372 | 86 | 10 | 0 | 72 | 157 | 52 | 137 | 4.83e-37 | 124 |
| Msa0592270 | AT5G22360.1 | 37.821 | 156 | 95 | 2 | 1 | 156 | 62 | 215 | 2.05e-36 | 125 |
| Msa0592270 | AT4G32150.1 | 38.961 | 154 | 92 | 2 | 1 | 154 | 61 | 212 | 9.85e-34 | 118 |
| Msa0592270 | AT2G25340.1 | 36.774 | 155 | 94 | 3 | 1 | 154 | 61 | 212 | 6.59e-29 | 106 |
| Msa0592270 | AT3G24890.2 | 53.191 | 94 | 38 | 2 | 51 | 138 | 14 | 107 | 1.03e-25 | 95.1 |
| Msa0592270 | AT3G24890.1 | 54.839 | 62 | 24 | 1 | 51 | 112 | 14 | 71 | 1.48e-15 | 67.8 |
| Msa0592270 | AT3G24890.4 | 54.839 | 62 | 24 | 1 | 51 | 112 | 14 | 71 | 1.48e-15 | 67.8 |
| Msa0592270 | AT3G24890.3 | 54.839 | 62 | 24 | 1 | 51 | 112 | 14 | 71 | 1.48e-15 | 67.8 |
| Msa0592270 | AT3G24890.5 | 54.839 | 62 | 24 | 1 | 51 | 112 | 14 | 71 | 1.48e-15 | 67.8 |
Find 39 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGTATTGTTTCATTTA+TGG | 0.070672 | 4_2:-17584215 | Msa0592270:three_prime_UTR |
| AAAAGTCTTAACAAAGAATT+TGG | 0.112791 | 4_2:-17585651 | Msa0592270:CDS |
| GCTCAAGTTTCTGAAGTTAA+AGG | 0.200850 | 4_2:-17585470 | Msa0592270:CDS |
| AAGCATGCTGAACATTATTT+TGG | 0.201111 | 4_2:-17584179 | Msa0592270:three_prime_UTR |
| GGGAGAGAAGATTGAGGTTT+TGG | 0.250137 | 4_2:-17585191 | Msa0592270:CDS |
| ACCACATCTTTCTCCTCAAT+TGG | 0.292197 | 4_2:+17584526 | None:intergenic |
| TGGAGTGACTGTTGGTGTTT+TGG | 0.295674 | 4_2:-17584142 | Msa0592270:three_prime_UTR |
| GTTAGGAAGAGAAGTGAATA+AGG | 0.295745 | 4_2:-17584285 | Msa0592270:three_prime_UTR |
| GTTATGTGCAGGTTATTGAT+AGG | 0.320869 | 4_2:-17585213 | Msa0592270:intron |
| TGCATTTGCTCCTTCAACTT+TGG | 0.326828 | 4_2:+17585542 | None:intergenic |
| CTAGAATTGTCACTACATAT+TGG | 0.335829 | 4_2:-17584393 | Msa0592270:three_prime_UTR |
| ATTTGCAGGCACAAGATTTC+AGG | 0.345983 | 4_2:-17584560 | Msa0592270:intron |
| ATACGTTCAAGAAAAGCTAT+TGG | 0.353729 | 4_2:+17585729 | None:intergenic |
| GCAAGTTTGCTAACTTCCTC+TGG | 0.381827 | 4_2:+17585503 | None:intergenic |
| TTTGTTTATTAGACATTCAA+TGG | 0.402021 | 4_2:-17584323 | Msa0592270:three_prime_UTR |
| TGAAGTTAAAGGAGTTATGA+TGG | 0.406422 | 4_2:-17585459 | Msa0592270:CDS |
| AACTGAGAACCTTCGCTCTC+AGG | 0.417900 | 4_2:-17585161 | Msa0592270:intron |
| CCACATCTTTCTCCTCAATT+GGG | 0.430467 | 4_2:+17584527 | None:intergenic |
| GGCACAAGATTTCAGGCAGC+AGG | 0.435566 | 4_2:-17584553 | Msa0592270:CDS |
| ATTGTTCTTTCTGTGTGTCA+TGG | 0.459510 | 4_2:-17584444 | Msa0592270:CDS |
| TTATGTGCAGGTTATTGATA+GGG | 0.472672 | 4_2:-17585212 | Msa0592270:intron |
| AGCTTACTGTGTTGTGGCAG+TGG | 0.485476 | 4_2:-17585772 | Msa0592270:CDS |
| AGAAGTGAATAAGGTGTGGT+AGG | 0.495213 | 4_2:-17584276 | Msa0592270:three_prime_UTR |
| AAAGTCTTAACAAAGAATTT+GGG | 0.498770 | 4_2:-17585650 | Msa0592270:intron |
| TGATAGGGGAGAGAAGATTG+AGG | 0.506422 | 4_2:-17585197 | Msa0592270:CDS |
| ATGCATTAGACCAAAGTTGA+AGG | 0.514320 | 4_2:-17585552 | Msa0592270:intron |
| TATGTGCAGGTTATTGATAG+GGG | 0.533979 | 4_2:-17585211 | Msa0592270:intron |
| TTTAATAAAAGATATGGTGG+AGG | 0.542291 | 4_2:-17585696 | Msa0592270:CDS |
| GGCAGCAGGGAACCCAATTG+AGG | 0.564168 | 4_2:-17584539 | Msa0592270:CDS |
| GAAGAGAAGTGAATAAGGTG+TGG | 0.600018 | 4_2:-17584280 | Msa0592270:three_prime_UTR |
| AACAATACAGTTTATAGAGT+AGG | 0.609354 | 4_2:+17584225 | None:intergenic |
| AGAATCTAACCTGAGAGCGA+AGG | 0.618405 | 4_2:+17585152 | None:intergenic |
| GCACAAGATTTCAGGCAGCA+GGG | 0.625497 | 4_2:-17584552 | Msa0592270:CDS |
| GTTGTGGCAGTGGAGTCTGT+TGG | 0.632770 | 4_2:-17585762 | Msa0592270:CDS |
| ATAATGCATGGAGTGACTGT+TGG | 0.643651 | 4_2:-17584150 | Msa0592270:three_prime_UTR |
| CCCAATTGAGGAGAAAGATG+TGG | 0.650037 | 4_2:-17584527 | Msa0592270:CDS |
| ATATTGTGTGGAACATCCAG+AGG | 0.668552 | 4_2:-17585519 | Msa0592270:CDS |
| GGAGCAAATGCAATATTGTG+TGG | 0.673674 | 4_2:-17585531 | Msa0592270:CDS |
| TATGATGGAAAATATCGACA+AGG | 0.735916 | 4_2:-17585444 | Msa0592270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTTTTTTTTTTTT+TGG | - | chr4_2:17584368-17584387 | Msa0592270:three_prime_UTR | 0.0% |
| !!! | ATATATTTTTTTTTTTTTTT+TGG | - | chr4_2:17584368-17584387 | Msa0592270:three_prime_UTR | 0.0% |
| !! | AAATCATAAATTTGAAGATA+GGG | + | chr4_2:17584286-17584305 | None:intergenic | 15.0% |
| !! | AAAATCATAAATTTGAAGAT+AGG | + | chr4_2:17584287-17584306 | None:intergenic | 15.0% |
| !!! | GATGATTTTAATAAAAGATA+TGG | - | chr4_2:17584529-17584548 | Msa0592270:CDS | 15.0% |
| !!! | ATCCAAAACTTTAAAATATT+GGG | + | chr4_2:17585300-17585319 | None:intergenic | 15.0% |
| !! | ATAAAATCTTGATACTTTAA+TGG | - | chr4_2:17585521-17585540 | Msa0592270:CDS | 15.0% |
| !! | TAAAATCTTGATACTTTAAT+GGG | - | chr4_2:17585522-17585541 | Msa0592270:CDS | 15.0% |
| !! | AAATCATAAATTTGAAGATA+GGG | + | chr4_2:17584286-17584305 | None:intergenic | 15.0% |
| !! | AAAATCATAAATTTGAAGAT+AGG | + | chr4_2:17584287-17584306 | None:intergenic | 15.0% |
| !!! | GATGATTTTAATAAAAGATA+TGG | - | chr4_2:17584529-17584548 | Msa0592270:CDS | 15.0% |
| !!! | ATCCAAAACTTTAAAATATT+GGG | + | chr4_2:17585300-17585319 | None:intergenic | 15.0% |
| !! | ATAAAATCTTGATACTTTAA+TGG | - | chr4_2:17585521-17585540 | Msa0592270:CDS | 15.0% |
| !! | TAAAATCTTGATACTTTAAT+GGG | - | chr4_2:17585522-17585541 | Msa0592270:CDS | 15.0% |
| !!! | GATTTTAATAAAAGATATGG+TGG | - | chr4_2:17584532-17584551 | Msa0592270:CDS | 20.0% |
| !! | AAAAGTCTTAACAAAGAATT+TGG | - | chr4_2:17584580-17584599 | Msa0592270:intron | 20.0% |
| !! | AAAGTCTTAACAAAGAATTT+GGG | - | chr4_2:17584581-17584600 | Msa0592270:intron | 20.0% |
| !! | TATTATTATAAGTTATGTGC+AGG | - | chr4_2:17585007-17585026 | Msa0592270:intron | 20.0% |
| !!! | ATCCCAATATTTTAAAGTTT+TGG | - | chr4_2:17585295-17585314 | Msa0592270:intron | 20.0% |
| !!! | CATCCAAAACTTTAAAATAT+TGG | + | chr4_2:17585301-17585320 | None:intergenic | 20.0% |
| !!! | CAATATTTTAAAGTTTTGGA+TGG | - | chr4_2:17585299-17585318 | Msa0592270:intron | 20.0% |
| !!! | TTTTATGAAACTGGAATTAT+TGG | + | chr4_2:17585507-17585526 | None:intergenic | 20.0% |
| !! | CATACAATATTCACAATTAA+TGG | + | chr4_2:17585611-17585630 | None:intergenic | 20.0% |
| !! | TTAATTGTGAATATTGTATG+AGG | - | chr4_2:17585611-17585630 | Msa0592270:intron | 20.0% |
| !! | TTTGTTTATTAGACATTCAA+TGG | - | chr4_2:17585908-17585927 | Msa0592270:intron | 20.0% |
| !! | AAACTGTATTGTTTCATTTA+TGG | - | chr4_2:17586016-17586035 | Msa0592270:intron | 20.0% |
| !!! | GATTTTAATAAAAGATATGG+TGG | - | chr4_2:17584532-17584551 | Msa0592270:CDS | 20.0% |
| !! | AAAAGTCTTAACAAAGAATT+TGG | - | chr4_2:17584580-17584599 | Msa0592270:intron | 20.0% |
| !! | AAAGTCTTAACAAAGAATTT+GGG | - | chr4_2:17584581-17584600 | Msa0592270:intron | 20.0% |
| !! | TATTATTATAAGTTATGTGC+AGG | - | chr4_2:17585007-17585026 | Msa0592270:intron | 20.0% |
| !!! | ATCCCAATATTTTAAAGTTT+TGG | - | chr4_2:17585295-17585314 | Msa0592270:intron | 20.0% |
| !!! | CATCCAAAACTTTAAAATAT+TGG | + | chr4_2:17585301-17585320 | None:intergenic | 20.0% |
| !!! | CAATATTTTAAAGTTTTGGA+TGG | - | chr4_2:17585299-17585318 | Msa0592270:intron | 20.0% |
| !!! | TTTTATGAAACTGGAATTAT+TGG | + | chr4_2:17585507-17585526 | None:intergenic | 20.0% |
| !! | CATACAATATTCACAATTAA+TGG | + | chr4_2:17585611-17585630 | None:intergenic | 20.0% |
| !! | TTAATTGTGAATATTGTATG+AGG | - | chr4_2:17585611-17585630 | Msa0592270:intron | 20.0% |
| !! | TTTGTTTATTAGACATTCAA+TGG | - | chr4_2:17585908-17585927 | Msa0592270:intron | 20.0% |
| !! | AAACTGTATTGTTTCATTTA+TGG | - | chr4_2:17586016-17586035 | Msa0592270:intron | 20.0% |
| ! | TAATCATGAAACATGTTCAA+CGG | + | chr4_2:17584427-17584446 | None:intergenic | 25.0% |
| ! | TTTAATAAAAGATATGGTGG+AGG | - | chr4_2:17584535-17584554 | Msa0592270:CDS | 25.0% |
| !! | GTATCAAGATTTTATGAAAC+TGG | + | chr4_2:17585516-17585535 | None:intergenic | 25.0% |
| ! | AACAATACAGTTTATAGAGT+AGG | + | chr4_2:17586009-17586028 | None:intergenic | 25.0% |
| !! | TTGTTTGAGTTAAAAACACT+AGG | + | chr4_2:17586117-17586136 | None:intergenic | 25.0% |
| ! | TAATCATGAAACATGTTCAA+CGG | + | chr4_2:17584427-17584446 | None:intergenic | 25.0% |
| ! | TTTAATAAAAGATATGGTGG+AGG | - | chr4_2:17584535-17584554 | Msa0592270:CDS | 25.0% |
| !! | GTATCAAGATTTTATGAAAC+TGG | + | chr4_2:17585516-17585535 | None:intergenic | 25.0% |
| ! | AACAATACAGTTTATAGAGT+AGG | + | chr4_2:17586009-17586028 | None:intergenic | 25.0% |
| !! | TTGTTTGAGTTAAAAACACT+AGG | + | chr4_2:17586117-17586136 | None:intergenic | 25.0% |
| GTGATTCTTACTTGCTTAAA+TGG | - | chr4_2:17584229-17584248 | Msa0592270:three_prime_UTR | 30.0% | |
| TTACTTGCTTAAATGGCTTA+TGG | - | chr4_2:17584236-17584255 | Msa0592270:three_prime_UTR | 30.0% | |
| GAGGGTAAGTGTTAAAATTA+TGG | + | chr4_2:17584264-17584283 | None:intergenic | 30.0% | |
| CATAAATTTGAAGATAGGGA+GGG | + | chr4_2:17584282-17584301 | None:intergenic | 30.0% | |
| TCATAAATTTGAAGATAGGG+AGG | + | chr4_2:17584283-17584302 | None:intergenic | 30.0% | |
| AAACATGTTCAACGGTAAAA+AGG | + | chr4_2:17584419-17584438 | None:intergenic | 30.0% | |
| TGAACATGTTTCATGATTAG+TGG | - | chr4_2:17584428-17584447 | Msa0592270:exon | 30.0% | |
| ATACGTTCAAGAAAAGCTAT+TGG | + | chr4_2:17584505-17584524 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTTGAACGTATTA+AGG | - | chr4_2:17584507-17584526 | Msa0592270:CDS | 30.0% |
| TGAAGTTAAAGGAGTTATGA+TGG | - | chr4_2:17584772-17584791 | Msa0592270:intron | 30.0% | |
| ! | TATGATGGAAAATATCGACA+AGG | - | chr4_2:17584787-17584806 | Msa0592270:intron | 30.0% |
| !! | AAGTGTCAGTGCTATTTATT+TGG | + | chr4_2:17584858-17584877 | None:intergenic | 30.0% |
| TGACACTTCATATTGAAGAA+CGG | - | chr4_2:17584870-17584889 | Msa0592270:intron | 30.0% | |
| GTTTGGTATCTATATGTCAT+TGG | - | chr4_2:17584892-17584911 | Msa0592270:intron | 30.0% | |
| TTATGTGTTTGTGTATGTCT+CGG | - | chr4_2:17584924-17584943 | Msa0592270:intron | 30.0% | |
| GAGTTTCATTTAATATCACG+TGG | - | chr4_2:17584974-17584993 | Msa0592270:intron | 30.0% | |
| TTATGTGCAGGTTATTGATA+GGG | - | chr4_2:17585019-17585038 | Msa0592270:intron | 30.0% | |
| ATTATAGTGTCCAAATCTCT+TGG | - | chr4_2:17585323-17585342 | Msa0592270:intron | 30.0% | |
| GATTGGAATGTCAATTGAAA+TGG | - | chr4_2:17585643-17585662 | Msa0592270:intron | 30.0% | |
| TTGAAATGGTATTCATTTGC+AGG | - | chr4_2:17585657-17585676 | Msa0592270:CDS | 30.0% | |
| CTAGAATTGTCACTACATAT+TGG | - | chr4_2:17585838-17585857 | Msa0592270:intron | 30.0% | |
| GGCTTCATGTAAAAAAAGTT+AGG | - | chr4_2:17585929-17585948 | Msa0592270:intron | 30.0% | |
| ! | AAGCATGCTGAACATTATTT+TGG | - | chr4_2:17586052-17586071 | Msa0592270:intron | 30.0% |
| GTGATTCTTACTTGCTTAAA+TGG | - | chr4_2:17584229-17584248 | Msa0592270:three_prime_UTR | 30.0% | |
| TTACTTGCTTAAATGGCTTA+TGG | - | chr4_2:17584236-17584255 | Msa0592270:three_prime_UTR | 30.0% | |
| GAGGGTAAGTGTTAAAATTA+TGG | + | chr4_2:17584264-17584283 | None:intergenic | 30.0% | |
| CATAAATTTGAAGATAGGGA+GGG | + | chr4_2:17584282-17584301 | None:intergenic | 30.0% | |
| TCATAAATTTGAAGATAGGG+AGG | + | chr4_2:17584283-17584302 | None:intergenic | 30.0% | |
| AAACATGTTCAACGGTAAAA+AGG | + | chr4_2:17584419-17584438 | None:intergenic | 30.0% | |
| TGAACATGTTTCATGATTAG+TGG | - | chr4_2:17584428-17584447 | Msa0592270:exon | 30.0% | |
| ATACGTTCAAGAAAAGCTAT+TGG | + | chr4_2:17584505-17584524 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTTGAACGTATTA+AGG | - | chr4_2:17584507-17584526 | Msa0592270:CDS | 30.0% |
| TGAAGTTAAAGGAGTTATGA+TGG | - | chr4_2:17584772-17584791 | Msa0592270:intron | 30.0% | |
| ! | TATGATGGAAAATATCGACA+AGG | - | chr4_2:17584787-17584806 | Msa0592270:intron | 30.0% |
| !! | AAGTGTCAGTGCTATTTATT+TGG | + | chr4_2:17584858-17584877 | None:intergenic | 30.0% |
| TGACACTTCATATTGAAGAA+CGG | - | chr4_2:17584870-17584889 | Msa0592270:intron | 30.0% | |
| GTTTGGTATCTATATGTCAT+TGG | - | chr4_2:17584892-17584911 | Msa0592270:intron | 30.0% | |
| TTATGTGTTTGTGTATGTCT+CGG | - | chr4_2:17584924-17584943 | Msa0592270:intron | 30.0% | |
| GAGTTTCATTTAATATCACG+TGG | - | chr4_2:17584974-17584993 | Msa0592270:intron | 30.0% | |
| TTATGTGCAGGTTATTGATA+GGG | - | chr4_2:17585019-17585038 | Msa0592270:intron | 30.0% | |
| ATTATAGTGTCCAAATCTCT+TGG | - | chr4_2:17585323-17585342 | Msa0592270:intron | 30.0% | |
| GATTGGAATGTCAATTGAAA+TGG | - | chr4_2:17585643-17585662 | Msa0592270:intron | 30.0% | |
| TTGAAATGGTATTCATTTGC+AGG | - | chr4_2:17585657-17585676 | Msa0592270:CDS | 30.0% | |
| CTAGAATTGTCACTACATAT+TGG | - | chr4_2:17585838-17585857 | Msa0592270:intron | 30.0% | |
| GGCTTCATGTAAAAAAAGTT+AGG | - | chr4_2:17585929-17585948 | Msa0592270:intron | 30.0% | |
| ! | AAGCATGCTGAACATTATTT+TGG | - | chr4_2:17586052-17586071 | Msa0592270:intron | 30.0% |
| ATGCATTAGACCAAAGTTGA+AGG | - | chr4_2:17584679-17584698 | Msa0592270:intron | 35.0% | |
| !! | GCTCAAGTTTCTGAAGTTAA+AGG | - | chr4_2:17584761-17584780 | Msa0592270:intron | 35.0% |
| CTTCATATTGAAGAACGGTT+TGG | - | chr4_2:17584875-17584894 | Msa0592270:intron | 35.0% | |
| GTTATGTGCAGGTTATTGAT+AGG | - | chr4_2:17585018-17585037 | Msa0592270:intron | 35.0% | |
| TATGTGCAGGTTATTGATAG+GGG | - | chr4_2:17585020-17585039 | Msa0592270:intron | 35.0% | |
| ACTCACACTTGAAACAAACA+AGG | + | chr4_2:17585210-17585229 | None:intergenic | 35.0% | |
| ! | TTGTTTGTTTCAAGTGTGAG+TGG | - | chr4_2:17585209-17585228 | Msa0592270:intron | 35.0% |
| GAAACTGGAATTATTGGACT+TGG | + | chr4_2:17585501-17585520 | None:intergenic | 35.0% | |
| GTATGAGGATTGTGAATGAT+TGG | - | chr4_2:17585626-17585645 | Msa0592270:intron | 35.0% | |
| ATTGTTCTTTCTGTGTGTCA+TGG | - | chr4_2:17585787-17585806 | Msa0592270:intron | 35.0% | |
| GTTAGGAAGAGAAGTGAATA+AGG | - | chr4_2:17585946-17585965 | Msa0592270:intron | 35.0% | |
| ! | TTTTGGCACTGTATAATGCA+TGG | - | chr4_2:17586069-17586088 | Msa0592270:intron | 35.0% |
| ATGCATTAGACCAAAGTTGA+AGG | - | chr4_2:17584679-17584698 | Msa0592270:intron | 35.0% | |
| !! | GCTCAAGTTTCTGAAGTTAA+AGG | - | chr4_2:17584761-17584780 | Msa0592270:intron | 35.0% |
| CTTCATATTGAAGAACGGTT+TGG | - | chr4_2:17584875-17584894 | Msa0592270:intron | 35.0% | |
| GTTATGTGCAGGTTATTGAT+AGG | - | chr4_2:17585018-17585037 | Msa0592270:intron | 35.0% | |
| TATGTGCAGGTTATTGATAG+GGG | - | chr4_2:17585020-17585039 | Msa0592270:intron | 35.0% | |
| ACTCACACTTGAAACAAACA+AGG | + | chr4_2:17585210-17585229 | None:intergenic | 35.0% | |
| ! | TTGTTTGTTTCAAGTGTGAG+TGG | - | chr4_2:17585209-17585228 | Msa0592270:intron | 35.0% |
| GAAACTGGAATTATTGGACT+TGG | + | chr4_2:17585501-17585520 | None:intergenic | 35.0% | |
| GTATGAGGATTGTGAATGAT+TGG | - | chr4_2:17585626-17585645 | Msa0592270:intron | 35.0% | |
| ATTGTTCTTTCTGTGTGTCA+TGG | - | chr4_2:17585787-17585806 | Msa0592270:intron | 35.0% | |
| GTTAGGAAGAGAAGTGAATA+AGG | - | chr4_2:17585946-17585965 | Msa0592270:intron | 35.0% | |
| ! | TTTTGGCACTGTATAATGCA+TGG | - | chr4_2:17586069-17586088 | Msa0592270:intron | 35.0% |
| ! | TTTTGCAGCTTACTGTGTTG+TGG | - | chr4_2:17584453-17584472 | Msa0592270:CDS | 40.0% |
| TGCATTTGCTCCTTCAACTT+TGG | + | chr4_2:17584692-17584711 | None:intergenic | 40.0% | |
| GGAGCAAATGCAATATTGTG+TGG | - | chr4_2:17584700-17584719 | Msa0592270:intron | 40.0% | |
| ATATTGTGTGGAACATCCAG+AGG | - | chr4_2:17584712-17584731 | Msa0592270:intron | 40.0% | |
| !! | AGAGAAGATTGAGGTTTTGG+TGG | - | chr4_2:17585043-17585062 | Msa0592270:intron | 40.0% |
| TAAGAGCAAGCCAATGATTC+AGG | + | chr4_2:17585353-17585372 | None:intergenic | 40.0% | |
| TTGATGCCTTAGAGATCACT+GGG | - | chr4_2:17585396-17585415 | Msa0592270:intron | 40.0% | |
| ATTTGCAGGCACAAGATTTC+AGG | - | chr4_2:17585671-17585690 | Msa0592270:CDS | 40.0% | |
| CCACATCTTTCTCCTCAATT+GGG | + | chr4_2:17585707-17585726 | None:intergenic | 40.0% | |
| ACCACATCTTTCTCCTCAAT+TGG | + | chr4_2:17585708-17585727 | None:intergenic | 40.0% | |
| GAAGAGAAGTGAATAAGGTG+TGG | - | chr4_2:17585951-17585970 | Msa0592270:intron | 40.0% | |
| AGAAGTGAATAAGGTGTGGT+AGG | - | chr4_2:17585955-17585974 | Msa0592270:intron | 40.0% | |
| ATAATGCATGGAGTGACTGT+TGG | - | chr4_2:17586081-17586100 | Msa0592270:intron | 40.0% | |
| ! | TTTTGCAGCTTACTGTGTTG+TGG | - | chr4_2:17584453-17584472 | Msa0592270:CDS | 40.0% |
| TGCATTTGCTCCTTCAACTT+TGG | + | chr4_2:17584692-17584711 | None:intergenic | 40.0% | |
| GGAGCAAATGCAATATTGTG+TGG | - | chr4_2:17584700-17584719 | Msa0592270:intron | 40.0% | |
| ATATTGTGTGGAACATCCAG+AGG | - | chr4_2:17584712-17584731 | Msa0592270:intron | 40.0% | |
| !! | AGAGAAGATTGAGGTTTTGG+TGG | - | chr4_2:17585043-17585062 | Msa0592270:intron | 40.0% |
| TAAGAGCAAGCCAATGATTC+AGG | + | chr4_2:17585353-17585372 | None:intergenic | 40.0% | |
| TTGATGCCTTAGAGATCACT+GGG | - | chr4_2:17585396-17585415 | Msa0592270:intron | 40.0% | |
| ATTTGCAGGCACAAGATTTC+AGG | - | chr4_2:17585671-17585690 | Msa0592270:CDS | 40.0% | |
| CCACATCTTTCTCCTCAATT+GGG | + | chr4_2:17585707-17585726 | None:intergenic | 40.0% | |
| ACCACATCTTTCTCCTCAAT+TGG | + | chr4_2:17585708-17585727 | None:intergenic | 40.0% | |
| GAAGAGAAGTGAATAAGGTG+TGG | - | chr4_2:17585951-17585970 | Msa0592270:intron | 40.0% | |
| AGAAGTGAATAAGGTGTGGT+AGG | - | chr4_2:17585955-17585974 | Msa0592270:intron | 40.0% | |
| ATAATGCATGGAGTGACTGT+TGG | - | chr4_2:17586081-17586100 | Msa0592270:intron | 40.0% | |
| !! | GCAAGTTTGCTAACTTCCTC+TGG | + | chr4_2:17584731-17584750 | None:intergenic | 45.0% |
| TGATAGGGGAGAGAAGATTG+AGG | - | chr4_2:17585034-17585053 | Msa0592270:intron | 45.0% | |
| ! | GGGAGAGAAGATTGAGGTTT+TGG | - | chr4_2:17585040-17585059 | Msa0592270:intron | 45.0% |
| AGAATCTAACCTGAGAGCGA+AGG | + | chr4_2:17585082-17585101 | None:intergenic | 45.0% | |
| TTCAGGACGACCAAGAGATT+TGG | + | chr4_2:17585336-17585355 | None:intergenic | 45.0% | |
| TCTTGGTCGTCCTGAATCAT+TGG | - | chr4_2:17585340-17585359 | Msa0592270:intron | 45.0% | |
| GTTGATGCCTTAGAGATCAC+TGG | - | chr4_2:17585395-17585414 | Msa0592270:intron | 45.0% | |
| TCGAATCCCAGTGATCTCTA+AGG | + | chr4_2:17585405-17585424 | None:intergenic | 45.0% | |
| CCCAATTGAGGAGAAAGATG+TGG | - | chr4_2:17585704-17585723 | Msa0592270:CDS | 45.0% | |
| !! | TGGAGTGACTGTTGGTGTTT+TGG | - | chr4_2:17586089-17586108 | Msa0592270:intron | 45.0% |
| !! | GCAAGTTTGCTAACTTCCTC+TGG | + | chr4_2:17584731-17584750 | None:intergenic | 45.0% |
| TGATAGGGGAGAGAAGATTG+AGG | - | chr4_2:17585034-17585053 | Msa0592270:intron | 45.0% | |
| ! | GGGAGAGAAGATTGAGGTTT+TGG | - | chr4_2:17585040-17585059 | Msa0592270:intron | 45.0% |
| AGAATCTAACCTGAGAGCGA+AGG | + | chr4_2:17585082-17585101 | None:intergenic | 45.0% | |
| TTCAGGACGACCAAGAGATT+TGG | + | chr4_2:17585336-17585355 | None:intergenic | 45.0% | |
| TCTTGGTCGTCCTGAATCAT+TGG | - | chr4_2:17585340-17585359 | Msa0592270:intron | 45.0% | |
| GTTGATGCCTTAGAGATCAC+TGG | - | chr4_2:17585395-17585414 | Msa0592270:intron | 45.0% | |
| TCGAATCCCAGTGATCTCTA+AGG | + | chr4_2:17585405-17585424 | None:intergenic | 45.0% | |
| CCCAATTGAGGAGAAAGATG+TGG | - | chr4_2:17585704-17585723 | Msa0592270:CDS | 45.0% | |
| !! | TGGAGTGACTGTTGGTGTTT+TGG | - | chr4_2:17586089-17586108 | Msa0592270:intron | 45.0% |
| AGCTTACTGTGTTGTGGCAG+TGG | - | chr4_2:17584459-17584478 | Msa0592270:CDS | 50.0% | |
| AACTGAGAACCTTCGCTCTC+AGG | - | chr4_2:17585070-17585089 | Msa0592270:intron | 50.0% | |
| GCACAAGATTTCAGGCAGCA+GGG | - | chr4_2:17585679-17585698 | Msa0592270:CDS | 50.0% | |
| AGCTTACTGTGTTGTGGCAG+TGG | - | chr4_2:17584459-17584478 | Msa0592270:CDS | 50.0% | |
| AACTGAGAACCTTCGCTCTC+AGG | - | chr4_2:17585070-17585089 | Msa0592270:intron | 50.0% | |
| GCACAAGATTTCAGGCAGCA+GGG | - | chr4_2:17585679-17585698 | Msa0592270:CDS | 50.0% | |
| GTTGTGGCAGTGGAGTCTGT+TGG | - | chr4_2:17584469-17584488 | Msa0592270:CDS | 55.0% | |
| GGCACAAGATTTCAGGCAGC+AGG | - | chr4_2:17585678-17585697 | Msa0592270:CDS | 55.0% | |
| GTTGTGGCAGTGGAGTCTGT+TGG | - | chr4_2:17584469-17584488 | Msa0592270:CDS | 55.0% | |
| GGCACAAGATTTCAGGCAGC+AGG | - | chr4_2:17585678-17585697 | Msa0592270:CDS | 55.0% | |
| GGCAGCAGGGAACCCAATTG+AGG | - | chr4_2:17585692-17585711 | Msa0592270:CDS | 60.0% | |
| GGCAGCAGGGAACCCAATTG+AGG | - | chr4_2:17585692-17585711 | Msa0592270:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 17584115 | 17586138 | 17584115 | ID=Msa0592270;Name=Msa0592270 |
| chr4_2 | mRNA | 17584115 | 17586138 | 17584115 | ID=Msa0592270-mRNA-1;Parent=Msa0592270;Name=Msa0592270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.75|0.6|0.8|1|1|5|316|157 |
| chr4_2 | exon | 17584115 | 17584574 | 17584115 | ID=Msa0592270-mRNA-1:exon:5041;Parent=Msa0592270-mRNA-1 |
| chr4_2 | exon | 17585162 | 17585224 | 17585162 | ID=Msa0592270-mRNA-1:exon:5040;Parent=Msa0592270-mRNA-1 |
| chr4_2 | exon | 17585445 | 17585565 | 17585445 | ID=Msa0592270-mRNA-1:exon:5039;Parent=Msa0592270-mRNA-1 |
| chr4_2 | exon | 17585651 | 17585792 | 17585651 | ID=Msa0592270-mRNA-1:exon:5038;Parent=Msa0592270-mRNA-1 |
| chr4_2 | exon | 17586135 | 17586138 | 17586135 | ID=Msa0592270-mRNA-1:exon:5037;Parent=Msa0592270-mRNA-1 |
| chr4_2 | CDS | 17586135 | 17586138 | 17586135 | ID=Msa0592270-mRNA-1:cds;Parent=Msa0592270-mRNA-1 |
| chr4_2 | CDS | 17585651 | 17585792 | 17585651 | ID=Msa0592270-mRNA-1:cds;Parent=Msa0592270-mRNA-1 |
| chr4_2 | CDS | 17585445 | 17585565 | 17585445 | ID=Msa0592270-mRNA-1:cds;Parent=Msa0592270-mRNA-1 |
| chr4_2 | CDS | 17585162 | 17585224 | 17585162 | ID=Msa0592270-mRNA-1:cds;Parent=Msa0592270-mRNA-1 |
| chr4_2 | CDS | 17584431 | 17584574 | 17584431 | ID=Msa0592270-mRNA-1:cds;Parent=Msa0592270-mRNA-1 |
| chr4_2 | three_prime_UTR | 17584115 | 17584430 | 17584115 | ID=Msa0592270-mRNA-1:three_prime_utr;Parent=Msa0592270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
