Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117150 | KEH23730.1 | 95.681 | 764 | 23 | 2 | 1 | 754 | 1 | 764 | 0.0 | 1505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117150 | sp|Q9SY14|CSCL2_ARATH | 68.497 | 765 | 224 | 5 | 1 | 753 | 1 | 760 | 0.0 | 1091 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117150 | A0A072UD09 | 95.681 | 764 | 23 | 2 | 1 | 754 | 1 | 764 | 0.0 | 1505 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117710 | Msa1117150 | 0.804398 | 2.202523e-49 | -8.615850e-47 |
| Msa0613120 | Msa1117150 | 0.809775 | 1.601629e-50 | -8.615850e-47 |
| Msa0639610 | Msa1117150 | 0.803529 | 3.338473e-49 | -8.615850e-47 |
| Msa0645300 | Msa1117150 | 0.800149 | 1.650045e-48 | -8.615850e-47 |
| Msa0678930 | Msa1117150 | 0.804884 | 1.743222e-49 | -8.615850e-47 |
| Msa0694370 | Msa1117150 | 0.807492 | 4.923352e-50 | -8.615850e-47 |
| Msa0726140 | Msa1117150 | 0.813728 | 2.210098e-51 | -8.615850e-47 |
| Msa0729800 | Msa1117150 | 0.845293 | 4.445759e-59 | -8.615850e-47 |
| Msa0731940 | Msa1117150 | 0.837492 | 5.033478e-57 | -8.615850e-47 |
| Msa0733290 | Msa1117150 | 0.818869 | 1.564554e-52 | -8.615850e-47 |
| Msa0745060 | Msa1117150 | 0.807184 | 5.720694e-50 | -8.615850e-47 |
| Msa0766630 | Msa1117150 | 0.828444 | 8.962024e-55 | -8.615850e-47 |
| Msa0767720 | Msa1117150 | 0.801669 | 8.072072e-49 | -8.615850e-47 |
| Msa0768310 | Msa1117150 | 0.824777 | 6.714570e-54 | -8.615850e-47 |
| Msa0784290 | Msa1117150 | 0.811140 | 8.126279e-51 | -8.615850e-47 |
| Msa0784300 | Msa1117150 | 0.823242 | 1.538941e-53 | -8.615850e-47 |
| Msa0808010 | Msa1117150 | 0.836002 | 1.207753e-56 | -8.615850e-47 |
| Msa0808020 | Msa1117150 | 0.826912 | 2.090142e-54 | -8.615850e-47 |
| Msa0810220 | Msa1117150 | 0.814586 | 1.428826e-51 | -8.615850e-47 |
| Msa0811080 | Msa1117150 | 0.804316 | 2.290924e-49 | -8.615850e-47 |
| Msa0811270 | Msa1117150 | 0.806854 | 6.719870e-50 | -8.615850e-47 |
| Msa0825860 | Msa1117150 | 0.806737 | 7.114023e-50 | -8.615850e-47 |
| Msa0833290 | Msa1117150 | 0.804644 | 1.956314e-49 | -8.615850e-47 |
| Msa0131770 | Msa1117150 | 0.809161 | 2.169471e-50 | -8.615850e-47 |
| Msa0135660 | Msa1117150 | 0.802397 | 5.718985e-49 | -8.615850e-47 |
| Msa0142220 | Msa1117150 | 0.829362 | 5.370780e-55 | -8.615850e-47 |
| Msa0198910 | Msa1117150 | 0.806954 | 6.400328e-50 | -8.615850e-47 |
| Msa0218810 | Msa1117150 | 0.819849 | 9.359409e-53 | -8.615850e-47 |
| Msa0227480 | Msa1117150 | 0.823499 | 1.340221e-53 | -8.615850e-47 |
| Msa0233080 | Msa1117150 | 0.815092 | 1.103812e-51 | -8.615850e-47 |
| Msa0371730 | Msa1117150 | 0.815411 | 9.372185e-52 | -8.615850e-47 |
| Msa0384890 | Msa1117150 | 0.812136 | 4.933580e-51 | -8.615850e-47 |
| Msa0385840 | Msa1117150 | 0.824635 | 7.255239e-54 | -8.615850e-47 |
| Msa0394970 | Msa1117150 | 0.817141 | 3.845582e-52 | -8.615850e-47 |
| Msa0407750 | Msa1117150 | 0.803890 | 2.808583e-49 | -8.615850e-47 |
| Msa0414420 | Msa1117150 | 0.819984 | 8.713086e-53 | -8.615850e-47 |
| Msa0436800 | Msa1117150 | 0.816234 | 6.144238e-52 | -8.615850e-47 |
| Msa0450000 | Msa1117150 | 0.815079 | 1.111030e-51 | -8.615850e-47 |
| Msa0452900 | Msa1117150 | 0.806267 | 8.938835e-50 | -8.615850e-47 |
| Msa0479340 | Msa1117150 | 0.813539 | 2.432150e-51 | -8.615850e-47 |
| Msa0981370 | Msa1117150 | 0.830521 | 2.802905e-55 | -8.615850e-47 |
| Msa1002810 | Msa1117150 | 0.811648 | 6.301062e-51 | -8.615850e-47 |
| Msa1016280 | Msa1117150 | 0.821502 | 3.901497e-53 | -8.615850e-47 |
| Msa1023050 | Msa1117150 | 0.816535 | 5.259336e-52 | -8.615850e-47 |
| Msa1023950 | Msa1117150 | 0.812802 | 3.528613e-51 | -8.615850e-47 |
| Msa1025360 | Msa1117150 | 0.802241 | 6.158135e-49 | -8.615850e-47 |
| Msa1044840 | Msa1117150 | 0.804379 | 2.222646e-49 | -8.615850e-47 |
| Msa1065570 | Msa1117150 | 0.852515 | 4.388770e-61 | -8.615850e-47 |
| Msa1075750 | Msa1117150 | 0.859755 | 3.320061e-63 | -8.615850e-47 |
| Msa0251640 | Msa1117150 | 0.819006 | 1.456856e-52 | -8.615850e-47 |
| Msa0267000 | Msa1117150 | 0.804921 | 1.712554e-49 | -8.615850e-47 |
| Msa0267010 | Msa1117150 | 0.809559 | 1.782141e-50 | -8.615850e-47 |
| Msa0288100 | Msa1117150 | 0.803065 | 4.163693e-49 | -8.615850e-47 |
| Msa0290870 | Msa1117150 | 0.843549 | 1.308789e-58 | -8.615850e-47 |
| Msa0305190 | Msa1117150 | 0.800234 | 1.586055e-48 | -8.615850e-47 |
| Msa0352540 | Msa1117150 | 0.800824 | 1.202140e-48 | -8.615850e-47 |
| Msa0360510 | Msa1117150 | 0.808270 | 3.363820e-50 | -8.615850e-47 |
| Msa1113170 | Msa1117150 | 0.810068 | 1.385259e-50 | -8.615850e-47 |
| Msa1117150 | Msa1121200 | 0.820013 | 8.584915e-53 | -8.615850e-47 |
| Msa1117150 | Msa1121480 | 0.840714 | 7.361610e-58 | -8.615850e-47 |
| Msa1117150 | Msa1121490 | 0.846044 | 2.780451e-59 | -8.615850e-47 |
| Msa1117150 | Msa1135220 | 0.808968 | 2.385716e-50 | -8.615850e-47 |
| Msa1117150 | Msa1136420 | 0.807630 | 4.602147e-50 | -8.615850e-47 |
| Msa1117150 | Msa1137570 | 0.812126 | 4.960224e-51 | -8.615850e-47 |
| Msa1117150 | Msa1150370 | 0.805858 | 1.089747e-49 | -8.615850e-47 |
| Msa1117150 | Msa1192640 | 0.805619 | 1.222848e-49 | -8.615850e-47 |
| Msa1117150 | Msa1195190 | 0.805673 | 1.191697e-49 | -8.615850e-47 |
| Msa1117150 | Msa1251910 | 0.806196 | 9.251520e-50 | -8.615850e-47 |
| Msa1117150 | Msa1253000 | 0.803130 | 4.037799e-49 | -8.615850e-47 |
| Msa1117150 | Msa1268880 | 0.808179 | 3.517084e-50 | -8.615850e-47 |
| Msa1117150 | Msa1269670 | 0.812968 | 3.245601e-51 | -8.615850e-47 |
| Msa1117150 | Msa1270230 | 0.802416 | 5.668712e-49 | -8.615850e-47 |
| Msa1117150 | Msa1284680 | 0.808447 | 3.083777e-50 | -8.615850e-47 |
| Msa1117150 | Msa1285930 | 0.813714 | 2.225378e-51 | -8.615850e-47 |
| Msa1117150 | Msa1287800 | 0.804081 | 2.563532e-49 | -8.615850e-47 |
| Msa1117150 | Msa1287810 | 0.808048 | 3.750172e-50 | -8.615850e-47 |
| Msa1117150 | Msa1288560 | 0.817105 | 3.918377e-52 | -8.615850e-47 |
| Msa1117150 | Msa1307890 | 0.812483 | 4.145170e-51 | -8.615850e-47 |
| Msa1117150 | Msa1320300 | 0.816754 | 4.698875e-52 | -8.615850e-47 |
| Msa1117150 | Msa1340590 | 0.816512 | 5.323257e-52 | -8.615850e-47 |
| Msa1117150 | Msa1397580 | 0.821848 | 3.246533e-53 | -8.615850e-47 |
| Msa1117150 | Msa1420820 | 0.808548 | 2.933798e-50 | -8.615850e-47 |
| Msa1117150 | Msa1422180 | 0.806298 | 8.805520e-50 | -8.615850e-47 |
| Msa1117150 | Msa1433120 | 0.825780 | 3.888727e-54 | -8.615850e-47 |
| Msa1117150 | Msa1444440 | 0.800756 | 1.241479e-48 | -8.615850e-47 |
| Msa1117150 | Msa1451570 | 0.833125 | 6.382952e-56 | -8.615850e-47 |
| Msa1117150 | Msa1466540 | 0.815581 | 8.591872e-52 | -8.615850e-47 |
| Msa0490140 | Msa1117150 | 0.800362 | 1.493648e-48 | -8.615850e-47 |
| Msa0491590 | Msa1117150 | 0.818909 | 1.532678e-52 | -8.615850e-47 |
| Msa0544240 | Msa1117150 | 0.810708 | 1.007877e-50 | -8.615850e-47 |
| Msa0564890 | Msa1117150 | 0.806720 | 7.170753e-50 | -8.615850e-47 |
| Msa0844490 | Msa1117150 | 0.831735 | 1.410429e-55 | -8.615850e-47 |
| Msa0846330 | Msa1117150 | 0.803819 | 2.906430e-49 | -8.615850e-47 |
| Msa0846350 | Msa1117150 | 0.825077 | 5.707003e-54 | -8.615850e-47 |
| Msa0848960 | Msa1117150 | 0.827632 | 1.405790e-54 | -8.615850e-47 |
| Msa0858980 | Msa1117150 | 0.812205 | 4.766672e-51 | -8.615850e-47 |
| Msa0864070 | Msa1117150 | 0.807625 | 4.614194e-50 | -8.615850e-47 |
| Msa0888370 | Msa1117150 | 0.807915 | 4.003045e-50 | -8.615850e-47 |
| Msa0899430 | Msa1117150 | 0.812795 | 3.542612e-51 | -8.615850e-47 |
| Msa0899450 | Msa1117150 | 0.826199 | 3.093075e-54 | -8.615850e-47 |
| Msa0907260 | Msa1117150 | 0.804487 | 2.110157e-49 | -8.615850e-47 |
| Msa0914270 | Msa1117150 | 0.803777 | 2.964605e-49 | -8.615850e-47 |
| Msa0936300 | Msa1117150 | 0.804117 | 2.519296e-49 | -8.615850e-47 |
| Msa0952720 | Msa1117150 | 0.805428 | 1.341316e-49 | -8.615850e-47 |
| Msa0958550 | Msa1117150 | 0.811170 | 8.005404e-51 | -8.615850e-47 |
| Msa0964900 | Msa1117150 | 0.810439 | 1.151895e-50 | -8.615850e-47 |
| Msa0974080 | Msa1117150 | 0.805532 | 1.275944e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117150 | MtrunA17_Chr7g0259591 | 95.681 | 764 | 23 | 2 | 1 | 754 | 1 | 764 | 0.0 | 1505 |
| Msa1117150 | MtrunA17_Chr5g0439871 | 63.123 | 762 | 266 | 4 | 1 | 750 | 1 | 759 | 0.0 | 1002 |
| Msa1117150 | MtrunA17_Chr5g0409801 | 59.167 | 720 | 279 | 4 | 1 | 708 | 1 | 717 | 0.0 | 882 |
| Msa1117150 | MtrunA17_Chr4g0075301 | 64.683 | 521 | 178 | 3 | 1 | 517 | 1 | 519 | 0.0 | 705 |
| Msa1117150 | MtrunA17_Chr6g0453641 | 31.486 | 740 | 463 | 15 | 4 | 730 | 3 | 711 | 1.12e-123 | 386 |
| Msa1117150 | MtrunA17_Chr7g0217981 | 30.411 | 730 | 448 | 15 | 10 | 704 | 9 | 713 | 3.14e-109 | 349 |
| Msa1117150 | MtrunA17_Chr4g0042751 | 30.466 | 686 | 438 | 11 | 10 | 681 | 9 | 669 | 2.08e-103 | 333 |
| Msa1117150 | MtrunA17_Chr2g0285541 | 30.096 | 731 | 453 | 15 | 10 | 712 | 9 | 709 | 1.50e-100 | 325 |
| Msa1117150 | MtrunA17_Chr1g0152031 | 28.431 | 714 | 455 | 13 | 10 | 705 | 9 | 684 | 1.26e-99 | 324 |
| Msa1117150 | MtrunA17_Chr5g0418061 | 30.299 | 736 | 462 | 16 | 10 | 728 | 9 | 710 | 1.68e-91 | 301 |
| Msa1117150 | MtrunA17_Chr4g0075291 | 57.143 | 231 | 87 | 2 | 531 | 749 | 2 | 232 | 3.96e-86 | 272 |
| Msa1117150 | MtrunA17_Chr3g0084121 | 35.092 | 379 | 228 | 5 | 319 | 685 | 9 | 381 | 5.85e-66 | 224 |
| Msa1117150 | MtrunA17_Chr3g0084131 | 33.548 | 155 | 94 | 4 | 113 | 266 | 57 | 203 | 1.05e-19 | 88.2 |
| Msa1117150 | MtrunA17_Chr3g0135281 | 49.425 | 87 | 42 | 2 | 321 | 406 | 59 | 144 | 3.32e-18 | 82.4 |
| Msa1117150 | MtrunA17_Chr3g0135291 | 32.086 | 187 | 118 | 4 | 420 | 604 | 4 | 183 | 3.20e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117150 | AT4G02900.1 | 68.497 | 765 | 224 | 5 | 1 | 753 | 1 | 760 | 0.0 | 1091 |
| Msa1117150 | AT4G02900.4 | 68.497 | 765 | 224 | 5 | 1 | 753 | 1 | 760 | 0.0 | 1090 |
| Msa1117150 | AT4G02900.3 | 68.497 | 765 | 224 | 5 | 1 | 753 | 1 | 760 | 0.0 | 1090 |
| Msa1117150 | AT1G11960.1 | 63.311 | 755 | 259 | 3 | 1 | 737 | 1 | 755 | 0.0 | 989 |
| Msa1117150 | AT1G11960.3 | 63.311 | 755 | 259 | 3 | 1 | 737 | 1 | 755 | 0.0 | 989 |
| Msa1117150 | AT4G22120.2 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT4G22120.4 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT4G22120.5 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT4G22120.1 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT4G22120.6 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT4G22120.3 | 64.581 | 751 | 252 | 4 | 1 | 737 | 1 | 751 | 0.0 | 983 |
| Msa1117150 | AT3G21620.1 | 63.017 | 749 | 257 | 6 | 1 | 733 | 1 | 745 | 0.0 | 966 |
| Msa1117150 | AT4G04340.2 | 62.647 | 763 | 271 | 5 | 1 | 749 | 1 | 763 | 0.0 | 957 |
| Msa1117150 | AT4G04340.1 | 62.647 | 763 | 271 | 5 | 1 | 749 | 1 | 763 | 0.0 | 957 |
| Msa1117150 | AT4G04340.3 | 62.647 | 763 | 271 | 5 | 1 | 749 | 1 | 763 | 0.0 | 957 |
| Msa1117150 | AT1G62320.1 | 62.319 | 759 | 274 | 4 | 1 | 751 | 1 | 755 | 0.0 | 956 |
| Msa1117150 | AT1G62320.3 | 61.619 | 766 | 277 | 4 | 1 | 751 | 1 | 764 | 0.0 | 952 |
| Msa1117150 | AT1G62320.5 | 61.619 | 766 | 277 | 4 | 1 | 751 | 1 | 764 | 0.0 | 952 |
| Msa1117150 | AT1G62320.4 | 61.749 | 766 | 274 | 5 | 1 | 751 | 1 | 762 | 0.0 | 948 |
| Msa1117150 | AT4G15430.2 | 58.322 | 751 | 297 | 5 | 1 | 737 | 1 | 749 | 0.0 | 919 |
| Msa1117150 | AT4G15430.1 | 58.245 | 752 | 297 | 6 | 1 | 737 | 1 | 750 | 0.0 | 915 |
| Msa1117150 | AT4G02900.2 | 67.110 | 602 | 183 | 4 | 164 | 753 | 1 | 599 | 0.0 | 863 |
| Msa1117150 | AT1G32090.1 | 56.005 | 766 | 313 | 7 | 1 | 745 | 1 | 763 | 0.0 | 842 |
| Msa1117150 | AT1G11960.2 | 66.227 | 607 | 202 | 1 | 1 | 604 | 1 | 607 | 0.0 | 840 |
| Msa1117150 | AT1G62320.2 | 64.696 | 609 | 208 | 2 | 1 | 604 | 1 | 607 | 0.0 | 802 |
| Msa1117150 | AT3G01100.1 | 30.988 | 739 | 445 | 20 | 4 | 716 | 3 | 702 | 3.41e-115 | 364 |
| Msa1117150 | AT3G01100.4 | 30.988 | 739 | 445 | 20 | 4 | 716 | 49 | 748 | 1.04e-114 | 364 |
| Msa1117150 | AT1G69450.2 | 28.065 | 734 | 489 | 8 | 4 | 727 | 3 | 707 | 4.60e-108 | 345 |
| Msa1117150 | AT1G69450.1 | 28.065 | 734 | 489 | 8 | 4 | 727 | 3 | 707 | 4.60e-108 | 345 |
| Msa1117150 | AT1G69450.3 | 27.237 | 760 | 487 | 8 | 4 | 726 | 3 | 733 | 8.76e-104 | 335 |
| Msa1117150 | AT3G01100.3 | 31.605 | 598 | 361 | 16 | 142 | 716 | 15 | 587 | 5.95e-97 | 313 |
| Msa1117150 | AT3G01100.2 | 31.613 | 620 | 372 | 17 | 4 | 607 | 3 | 586 | 6.91e-97 | 313 |
| Msa1117150 | AT1G58520.4 | 29.943 | 698 | 435 | 11 | 10 | 688 | 9 | 671 | 1.07e-95 | 314 |
| Msa1117150 | AT1G58520.1 | 29.943 | 698 | 435 | 11 | 10 | 688 | 9 | 671 | 1.07e-95 | 314 |
| Msa1117150 | AT1G58520.7 | 29.943 | 698 | 435 | 11 | 10 | 688 | 9 | 671 | 1.07e-95 | 314 |
| Msa1117150 | AT1G58520.6 | 29.943 | 698 | 435 | 11 | 10 | 688 | 9 | 671 | 1.07e-95 | 314 |
| Msa1117150 | AT1G58520.2 | 29.943 | 698 | 435 | 11 | 10 | 688 | 9 | 671 | 1.07e-95 | 314 |
| Msa1117150 | AT3G54510.2 | 30.758 | 686 | 430 | 14 | 10 | 681 | 9 | 663 | 1.85e-95 | 312 |
| Msa1117150 | AT1G10090.1 | 28.590 | 752 | 465 | 14 | 10 | 742 | 9 | 707 | 7.86e-91 | 301 |
| Msa1117150 | AT1G30360.1 | 30.316 | 696 | 431 | 17 | 9 | 677 | 8 | 676 | 4.18e-87 | 290 |
| Msa1117150 | AT3G54510.3 | 31.561 | 602 | 374 | 13 | 10 | 604 | 9 | 579 | 9.05e-82 | 272 |
| Msa1117150 | AT3G54510.4 | 30.678 | 590 | 370 | 13 | 106 | 681 | 4 | 568 | 2.93e-80 | 269 |
| Msa1117150 | AT3G54510.1 | 30.678 | 590 | 370 | 13 | 106 | 681 | 4 | 568 | 2.93e-80 | 269 |
| Msa1117150 | AT1G58520.5 | 30.228 | 569 | 362 | 8 | 136 | 688 | 4 | 553 | 3.58e-79 | 266 |
| Msa1117150 | AT3G54510.6 | 31.537 | 501 | 308 | 11 | 195 | 681 | 5 | 484 | 1.23e-67 | 233 |
| Msa1117150 | AT3G54510.5 | 31.621 | 506 | 314 | 12 | 106 | 604 | 4 | 484 | 7.11e-67 | 229 |
Find 164 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCCCTTCAGATACCATTT+TGG | 0.192481 | 7_3:-65394845 | None:intergenic |
| CGATGAGTAACCTTCTATTT+TGG | 0.205057 | 7_3:-65398595 | None:intergenic |
| CTAGCTTCATTATCAGATTC+TGG | 0.206296 | 7_3:-65400060 | None:intergenic |
| CTGACTGATTCATCCATATC+TGG | 0.234752 | 7_3:-65396437 | None:intergenic |
| TTTATTCGGATTTATATTCT+TGG | 0.267379 | 7_3:+65395019 | Msa1117150:CDS |
| TTACTCATCGCTCTCTGTTT+TGG | 0.276073 | 7_3:+65398608 | Msa1117150:CDS |
| CGAAGCGCCCTTTGCAATAT+AGG | 0.284794 | 7_3:-65399595 | None:intergenic |
| TTCCGCAACCATGTTCCTTT+TGG | 0.293492 | 7_3:+65394775 | Msa1117150:CDS |
| ATCTGTAAAGTCTGTTATTC+AGG | 0.300154 | 7_3:+65398506 | Msa1117150:CDS |
| CGCAACCTGTCTTGACAATC+TGG | 0.317784 | 7_3:+65399567 | Msa1117150:CDS |
| ATAGGGTTTACTTCCCAAAA+TGG | 0.321661 | 7_3:+65394831 | Msa1117150:CDS |
| TTGACTCAGCCGTCTTTATT+CGG | 0.322083 | 7_3:+65395005 | Msa1117150:CDS |
| CTAAGATTCAGGTCAAAATA+TGG | 0.326645 | 7_3:-65398052 | None:intergenic |
| AAGTAAACCCTATCATTAAA+AGG | 0.330427 | 7_3:-65394821 | None:intergenic |
| AGAAGAAGAGATTGCAAAAC+TGG | 0.332584 | 7_3:+65396693 | Msa1117150:CDS |
| GCTCTCTTTGTCTGAATAAG+AGG | 0.340332 | 7_3:-65400021 | None:intergenic |
| TTGACTTTGGGACCTACATT+AGG | 0.351376 | 7_3:+65394918 | Msa1117150:CDS |
| CGAGTAGTTGGTCTCTTTGA+AGG | 0.367311 | 7_3:-65396749 | None:intergenic |
| TTCCTTGGAAGCATTGTAAC+AGG | 0.376837 | 7_3:+65398678 | Msa1117150:CDS |
| TGAGCAATCTTCTAAGATTC+AGG | 0.376865 | 7_3:-65398063 | None:intergenic |
| ACTCAATGTTAGCTAAAGAT+TGG | 0.381886 | 7_3:-65398141 | None:intergenic |
| ACGAGAGTGGAGCAACGTTT+TGG | 0.384258 | 7_3:+65399438 | Msa1117150:CDS |
| AAATTTCTTGACAATTGATC+TGG | 0.384389 | 7_3:-65394888 | None:intergenic |
| ACAGGTATGATGGGTCTCTT+GGG | 0.384820 | 7_3:+65396843 | Msa1117150:CDS |
| AAATTTGTTAACCTTGACTT+TGG | 0.386187 | 7_3:+65394905 | Msa1117150:CDS |
| TCAATATCGAACATTCCATT+TGG | 0.393155 | 7_3:+65395284 | Msa1117150:CDS |
| GCCCCAGCATGAAATATAAC+TGG | 0.395876 | 7_3:-65399061 | None:intergenic |
| GGAACATGGTTGCGGAAAAC+AGG | 0.397116 | 7_3:-65394769 | None:intergenic |
| CCTACATTAGGTTCCTCAAT+TGG | 0.398480 | 7_3:+65394930 | Msa1117150:CDS |
| GTAATGAAGTTACTCATTGC+AGG | 0.401267 | 7_3:+65398481 | Msa1117150:CDS |
| TAATGTCTCAGGTTCAAGTT+TGG | 0.407662 | 7_3:-65399916 | None:intergenic |
| TTATTCGGATTTATATTCTT+GGG | 0.407892 | 7_3:+65395020 | Msa1117150:CDS |
| GACAGGTATGATGGGTCTCT+TGG | 0.408313 | 7_3:+65396842 | Msa1117150:intron |
| GACGGGTGGGCTGGAATAGC+TGG | 0.416919 | 7_3:+65398909 | Msa1117150:CDS |
| GTCCACCGTCGAGTAGTTAT+CGG | 0.417762 | 7_3:+65399467 | Msa1117150:CDS |
| ACTACTCGACGGTGGACATC+TGG | 0.419663 | 7_3:-65399461 | None:intergenic |
| CAGAGCCTAGGGATGTCTAC+TGG | 0.423817 | 7_3:+65398014 | Msa1117150:CDS |
| GTTATTCAGGGATTTCTGCC+AGG | 0.429156 | 7_3:+65398519 | Msa1117150:CDS |
| TTATTCCATAGGTCTTGGTT+AGG | 0.429459 | 7_3:+65396405 | Msa1117150:intron |
| GCGCACCTCTTTGATCCAAA+TGG | 0.437135 | 7_3:-65395299 | None:intergenic |
| CATAGCTGCTGTTGTAGAAC+TGG | 0.437977 | 7_3:-65400091 | None:intergenic |
| ATCCAGTTATATTTCATGCT+GGG | 0.439614 | 7_3:+65399059 | Msa1117150:CDS |
| ATGGCAATGTCCAAAATAGA+AGG | 0.440262 | 7_3:+65398585 | Msa1117150:CDS |
| GCCGACATTGGTGTTTCTGC+TGG | 0.449446 | 7_3:+65394740 | Msa1117150:CDS |
| ACAATTGATCTGGAATTCGT+TGG | 0.454564 | 7_3:-65394878 | None:intergenic |
| GTATCATAAAGAAGAAAGTA+AGG | 0.457048 | 7_3:-65398105 | None:intergenic |
| AATTTGTTAACCTTGACTTT+GGG | 0.459024 | 7_3:+65394906 | Msa1117150:CDS |
| CTACCATTTGGCTGACAGAA+TGG | 0.462781 | 7_3:+65397987 | Msa1117150:CDS |
| GGTGAAAGATACACTTGAAC+GGG | 0.464589 | 7_3:+65399885 | Msa1117150:CDS |
| AGACTTACAGTAAATTGATC+TGG | 0.467443 | 7_3:-65395735 | None:intergenic |
| GCTGCAGGGATAATAGCATT+GGG | 0.467974 | 7_3:-65397899 | None:intergenic |
| CAGTAGACATCCCTAGGCTC+TGG | 0.470619 | 7_3:-65398013 | None:intergenic |
| AATCCAGTTATATTTCATGC+TGG | 0.470705 | 7_3:+65399058 | Msa1117150:CDS |
| CATCTTGAAGATAATGTCTC+AGG | 0.472536 | 7_3:-65399927 | None:intergenic |
| GACATTGCCATGAGGACACT+TGG | 0.473903 | 7_3:-65398573 | None:intergenic |
| TATATCTCAAATTCTTCTGA+TGG | 0.474947 | 7_3:+65399496 | Msa1117150:CDS |
| TTGAATGAAACAAATGCTGC+AGG | 0.476649 | 7_3:-65397914 | None:intergenic |
| GTTCTCGTCAATGTGTTCCT+TGG | 0.477629 | 7_3:+65398663 | Msa1117150:CDS |
| TTGGTTCCCATTAACTGGAC+TGG | 0.478476 | 7_3:+65395203 | Msa1117150:CDS |
| TATAGCAAAATTCAAGCTAC+CGG | 0.478809 | 7_3:-65399024 | None:intergenic |
| TGCTGCAGGGATAATAGCAT+TGG | 0.479239 | 7_3:-65397900 | None:intergenic |
| TGATCAATAAGCTCAGGTTC+AGG | 0.480429 | 7_3:-65394974 | None:intergenic |
| AAAGATTGGACAAAGGCTAT+AGG | 0.480882 | 7_3:-65398127 | None:intergenic |
| TTCAGACAAAGAGAGCTTGT+CGG | 0.481639 | 7_3:+65400028 | Msa1117150:CDS |
| TAAAAGCCAGTAGGGTAGTT+GGG | 0.481818 | 7_3:-65395175 | None:intergenic |
| CAATTGATCTGGAATTCGTT+GGG | 0.485090 | 7_3:-65394877 | None:intergenic |
| AGCAAAGAAGACTACAATGA+AGG | 0.486143 | 7_3:-65399117 | None:intergenic |
| ATTTGTCCCAACTACCCTAC+TGG | 0.486549 | 7_3:+65395169 | Msa1117150:CDS |
| TACCATTTGGCTGACAGAAT+GGG | 0.487500 | 7_3:+65397988 | Msa1117150:CDS |
| ATGTATATAGACAGGTATGA+TGG | 0.487571 | 7_3:+65396833 | Msa1117150:intron |
| TCTGTAAAGTCTGTTATTCA+GGG | 0.493989 | 7_3:+65398507 | Msa1117150:CDS |
| AACTGCTTAACCAACCTCTA+GGG | 0.497795 | 7_3:-65399639 | None:intergenic |
| ATAAAAGCCAGTAGGGTAGT+TGG | 0.499055 | 7_3:-65395176 | None:intergenic |
| CGCCAAAAGGAACATGGTTG+CGG | 0.500962 | 7_3:-65394777 | None:intergenic |
| ATATCTCAAATTCTTCTGAT+GGG | 0.501027 | 7_3:+65399497 | Msa1117150:CDS |
| AAACTAGCGATCCTACCATT+TGG | 0.503967 | 7_3:+65397975 | Msa1117150:CDS |
| AATGTCAAACCCTTGGCTGC+TGG | 0.505223 | 7_3:-65395242 | None:intergenic |
| ATTATGATAGACGGGTGGGC+TGG | 0.507544 | 7_3:+65398900 | Msa1117150:CDS |
| GCAACACTGCAAACGCCAAA+AGG | 0.508436 | 7_3:-65394790 | None:intergenic |
| TGACTGATTCATCCATATCT+GGG | 0.510068 | 7_3:-65396436 | None:intergenic |
| AAGAAAGCTACCCGAGTAGT+TGG | 0.511175 | 7_3:-65396761 | None:intergenic |
| ATGAAATATAACTGGATTCG+AGG | 0.512490 | 7_3:-65399053 | None:intergenic |
| TTTGGAAGCACCAGCAGCCA+AGG | 0.513160 | 7_3:+65395232 | Msa1117150:CDS |
| CAGAATGGGCTCCAGAGCCT+AGG | 0.514282 | 7_3:+65398002 | Msa1117150:CDS |
| TGATGCATCAGATAGTGATC+AGG | 0.518513 | 7_3:-65396494 | None:intergenic |
| GGAAGAAGTAAAGGTGTGAC+TGG | 0.518647 | 7_3:-65399095 | None:intergenic |
| ATCGCTAAATGTCAAACCCT+TGG | 0.521389 | 7_3:-65395249 | None:intergenic |
| CTTCCCAAAATGGTATCTGA+AGG | 0.522043 | 7_3:+65394841 | Msa1117150:CDS |
| ATGACATACATTATGATAGA+CGG | 0.523461 | 7_3:+65398891 | Msa1117150:CDS |
| CTCTGCAGTATAGTAATCAA+TGG | 0.525070 | 7_3:-65396880 | None:intergenic |
| TGTCGTATGTCTTCTCAGCT+TGG | 0.526719 | 7_3:+65395634 | Msa1117150:CDS |
| CTTCAAAGAGACCAACTACT+CGG | 0.532128 | 7_3:+65396750 | Msa1117150:CDS |
| GAATAGCTGGAGAAATCCTC+AGG | 0.532630 | 7_3:+65398922 | Msa1117150:CDS |
| AATAACTTTAATGCTAGCCC+TGG | 0.533938 | 7_3:-65398537 | None:intergenic |
| AGCCCATTCTGTCAGCCAAA+TGG | 0.536128 | 7_3:-65397990 | None:intergenic |
| TTATTCAGGGATTTCTGCCA+GGG | 0.537824 | 7_3:+65398520 | Msa1117150:CDS |
| GCAAAGAAGACTACAATGAA+GGG | 0.537875 | 7_3:-65399116 | None:intergenic |
| CCAAAACTATAAAAGCCAGT+AGG | 0.538249 | 7_3:-65395184 | None:intergenic |
| GAGTAGTTGGTCTCTTTGAA+GGG | 0.539457 | 7_3:-65396748 | None:intergenic |
| ACAATGAAGGGAAGAAGTAA+AGG | 0.540899 | 7_3:-65399104 | None:intergenic |
| GGTTCCACCTATATTGCAAA+GGG | 0.541413 | 7_3:+65399588 | Msa1117150:CDS |
| TCAGGCATATGCAATGCTGC+AGG | 0.546680 | 7_3:-65394956 | None:intergenic |
| CAAAACTATAAAAGCCAGTA+GGG | 0.547528 | 7_3:-65395183 | None:intergenic |
| AGAGCCTAGGGATGTCTACT+GGG | 0.550196 | 7_3:+65398015 | Msa1117150:CDS |
| CCTGCATGATCAATAAGCTC+AGG | 0.550330 | 7_3:-65394980 | None:intergenic |
| ATGCTGCAGGCATCCAATTG+AGG | 0.550515 | 7_3:-65394943 | None:intergenic |
| AGAATGGGCTCCAGAGCCTA+GGG | 0.551400 | 7_3:+65398003 | Msa1117150:CDS |
| AGTGAACATTGATGATGAAG+AGG | 0.551642 | 7_3:+65399993 | Msa1117150:CDS |
| TGTTTCATTCAAAACCCGAT+GGG | 0.552976 | 7_3:+65397925 | Msa1117150:CDS |
| TGGAACCAGATTGTCAAGAC+AGG | 0.557882 | 7_3:-65399572 | None:intergenic |
| TTGTTTCATTCAAAACCCGA+TGG | 0.561125 | 7_3:+65397924 | Msa1117150:CDS |
| TCCAGTTATATTTCATGCTG+GGG | 0.561644 | 7_3:+65399060 | Msa1117150:CDS |
| CTACATGGTCTATCGGCACC+AGG | 0.562437 | 7_3:+65399145 | Msa1117150:CDS |
| ATTGCTTCCAAGTGTCCTCA+TGG | 0.566891 | 7_3:+65398566 | Msa1117150:CDS |
| TGACATACATTATGATAGAC+GGG | 0.574181 | 7_3:+65398892 | Msa1117150:CDS |
| TTCCCAAAATGGTATCTGAA+GGG | 0.574307 | 7_3:+65394842 | Msa1117150:CDS |
| GACATGCTATAGTCTTTACA+AGG | 0.576287 | 7_3:+65395656 | Msa1117150:CDS |
| GCCAGCAGAAACACCAATGT+CGG | 0.578074 | 7_3:-65394741 | None:intergenic |
| CCAATTGAGGAACCTAATGT+AGG | 0.578905 | 7_3:-65394930 | None:intergenic |
| AATATAAATCCGAATAAAGA+CGG | 0.579057 | 7_3:-65395014 | None:intergenic |
| TAACATTGAGTCAATCAAGA+AGG | 0.582957 | 7_3:+65398153 | Msa1117150:CDS |
| CTCAGAGCCTACTCTGAAGA+GGG | 0.583554 | 7_3:-65398738 | None:intergenic |
| GAATAAAGACGGCTGAGTCA+AGG | 0.585407 | 7_3:-65395003 | None:intergenic |
| CCTGAGCTTATTGATCATGC+AGG | 0.587814 | 7_3:+65394980 | Msa1117150:CDS |
| TTCCTGTTACAATGCTTCCA+AGG | 0.589246 | 7_3:-65398680 | None:intergenic |
| AGACAGAATGCTATGGATCC+CGG | 0.589304 | 7_3:+65399005 | Msa1117150:CDS |
| TGGTTCCACCTATATTGCAA+AGG | 0.591941 | 7_3:+65399587 | Msa1117150:CDS |
| TGTATATAGACAGGTATGAT+GGG | 0.594391 | 7_3:+65396834 | Msa1117150:intron |
| ATGGGATTGCTTAGTACAAG+AGG | 0.595063 | 7_3:+65399515 | Msa1117150:CDS |
| TCCCAAAATGGTATCTGAAG+GGG | 0.596192 | 7_3:+65394843 | Msa1117150:CDS |
| TGGTGAAAGATACACTTGAA+CGG | 0.597968 | 7_3:+65399884 | Msa1117150:CDS |
| TAATGTAGGTCCCAAAGTCA+AGG | 0.598119 | 7_3:-65394916 | None:intergenic |
| GCTCAGAGCCTACTCTGAAG+AGG | 0.602057 | 7_3:-65398739 | None:intergenic |
| GCAAGACAGACAGAATGCTA+TGG | 0.602368 | 7_3:+65398998 | Msa1117150:CDS |
| TTCAAAGAGACCAACTACTC+GGG | 0.602375 | 7_3:+65396751 | Msa1117150:CDS |
| ATGGCGACTCTAGCCGACAT+TGG | 0.604059 | 7_3:+65394728 | Msa1117150:CDS |
| TTCATTCAAAACCCGATGGG+GGG | 0.604469 | 7_3:+65397928 | Msa1117150:CDS |
| ACATTCCATTTGGATCAAAG+AGG | 0.605831 | 7_3:+65395294 | Msa1117150:CDS |
| GACTGATTCATCCATATCTG+GGG | 0.608072 | 7_3:-65396435 | None:intergenic |
| TTTCATTCAAAACCCGATGG+GGG | 0.609858 | 7_3:+65397927 | Msa1117150:CDS |
| TTGGAAGCACCAGCAGCCAA+GGG | 0.611458 | 7_3:+65395233 | Msa1117150:CDS |
| TGAATGAAACAAATGCTGCA+GGG | 0.615956 | 7_3:-65397913 | None:intergenic |
| AGCGCCCTTTGCAATATAGG+TGG | 0.619007 | 7_3:-65399592 | None:intergenic |
| ATACATTATGATAGACGGGT+GGG | 0.620820 | 7_3:+65398896 | Msa1117150:CDS |
| TGCAAACGCCAAAAGGAACA+TGG | 0.621073 | 7_3:-65394783 | None:intergenic |
| TGAATAACAGACTTTACAGA+TGG | 0.622885 | 7_3:-65398504 | None:intergenic |
| TATAACCAGCAATACGAGAG+TGG | 0.625028 | 7_3:+65399425 | Msa1117150:intron |
| CATTCTGTCAGCCAAATGGT+AGG | 0.625941 | 7_3:-65397986 | None:intergenic |
| ACTGCTTAACCAACCTCTAG+GGG | 0.630696 | 7_3:-65399638 | None:intergenic |
| ATAGCAAAATTCAAGCTACC+GGG | 0.635540 | 7_3:-65399023 | None:intergenic |
| GTTTCATTCAAAACCCGATG+GGG | 0.636202 | 7_3:+65397926 | Msa1117150:CDS |
| TGGAAGCATTGTAACAGGAA+CGG | 0.639985 | 7_3:+65398683 | Msa1117150:CDS |
| TTCAAGTGTATCTTTCACCA+TGG | 0.659869 | 7_3:-65399881 | None:intergenic |
| GTTAGCTAAAGATTGGACAA+AGG | 0.662930 | 7_3:-65398134 | None:intergenic |
| CATACATTATGATAGACGGG+TGG | 0.671015 | 7_3:+65398895 | Msa1117150:CDS |
| CAGGTATGATGGGTCTCTTG+GGG | 0.678623 | 7_3:+65396844 | Msa1117150:CDS |
| ACTGATTCATCCATATCTGG+GGG | 0.695232 | 7_3:-65396434 | None:intergenic |
| CTGCAGGGATAATAGCATTG+GGG | 0.697125 | 7_3:-65397898 | None:intergenic |
| GATTTGATGACAGGATGCCA+TGG | 0.697419 | 7_3:+65399864 | Msa1117150:intron |
| TCAAACCGATAACTACTCGA+CGG | 0.698228 | 7_3:-65399472 | None:intergenic |
| CTGGTGCCGATAGACCATGT+AGG | 0.717405 | 7_3:-65399144 | None:intergenic |
| CTGCTTAACCAACCTCTAGG+GGG | 0.719142 | 7_3:-65399637 | None:intergenic |
| TGATTAACGAAGATAACCTG+AGG | 0.736182 | 7_3:-65398938 | None:intergenic |
| GCATCAGATAGTGATCAGGA+TGG | 0.743462 | 7_3:-65396490 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAGTTTTTTTTTTTTTA+TGG | + | chr7_3:65395963-65395982 | Msa1117150:intron | 10.0% |
| !!! | GAAAGTTTTTTTTTTTTTAT+GGG | + | chr7_3:65395964-65395983 | Msa1117150:intron | 10.0% |
| !! | AATCTAAATAAAATTACAGA+TGG | - | chr7_3:65396532-65396551 | None:intergenic | 15.0% |
| !! | ATTAATTTCTTCTGAATTAT+AGG | + | chr7_3:65396631-65396650 | Msa1117150:intron | 15.0% |
| !!! | AATTTTCGATTCTTTTATTT+GGG | + | chr7_3:65397087-65397106 | Msa1117150:intron | 15.0% |
| !! | ACTATGTAGATAAATAATAA+AGG | - | chr7_3:65397139-65397158 | None:intergenic | 15.0% |
| !! | TTTATTATTTATCTACATAG+TGG | + | chr7_3:65397138-65397157 | Msa1117150:intron | 15.0% |
| !! | TACAATATAAAACATTTCAT+TGG | + | chr7_3:65397182-65397201 | Msa1117150:intron | 15.0% |
| !!! | TTATACTTTTGAATATTAGA+AGG | - | chr7_3:65397303-65397322 | None:intergenic | 15.0% |
| !!! | TCAAAAGTATAATCAAAATA+TGG | + | chr7_3:65397311-65397330 | Msa1117150:intron | 15.0% |
| !! | CAATATTTAATATATGGAAA+TGG | - | chr7_3:65399666-65399685 | None:intergenic | 15.0% |
| !! | CATACACAATATTTAATATA+TGG | - | chr7_3:65399672-65399691 | None:intergenic | 15.0% |
| !! | AATATAAATCCGAATAAAGA+CGG | - | chr7_3:65395017-65395036 | None:intergenic | 20.0% |
| !! | TTTATTCGGATTTATATTCT+TGG | + | chr7_3:65395019-65395038 | Msa1117150:CDS | 20.0% |
| !! | TTATTCGGATTTATATTCTT+GGG | + | chr7_3:65395020-65395039 | Msa1117150:CDS | 20.0% |
| !! | CACTAATTTAAACCATTAAA+TGG | - | chr7_3:65395068-65395087 | None:intergenic | 20.0% |
| !! | TCAATTCTCAATAATATTTG+TGG | - | chr7_3:65395381-65395400 | None:intergenic | 20.0% |
| !! | CAAATATTATTGAGAATTGA+AGG | + | chr7_3:65395381-65395400 | Msa1117150:intron | 20.0% |
| !! | AAGTCAATTCAGTTATTATT+CGG | - | chr7_3:65395492-65395511 | None:intergenic | 20.0% |
| !! | ATTTACTGTAAGTCTTTATA+AGG | + | chr7_3:65395743-65395762 | Msa1117150:intron | 20.0% |
| !!! | AACTATTCTATGGTTTTTTA+TGG | + | chr7_3:65396219-65396238 | Msa1117150:intron | 20.0% |
| !!! | ACTATTCTATGGTTTTTTAT+GGG | + | chr7_3:65396220-65396239 | Msa1117150:intron | 20.0% |
| !!! | TTTTCTTTCTTTTATTCCAT+AGG | + | chr7_3:65396394-65396413 | Msa1117150:intron | 20.0% |
| !! | ACAAAATATACTAACAAAAG+TGG | - | chr7_3:65396937-65396956 | None:intergenic | 20.0% |
| !!! | GAATTTTCGATTCTTTTATT+TGG | + | chr7_3:65397086-65397105 | Msa1117150:intron | 20.0% |
| !!! | TGGATTGGTTTAAAATAAAA+TGG | - | chr7_3:65397220-65397239 | None:intergenic | 20.0% |
| !!! | TAGAATTATTTCTCTTTGTT+TGG | - | chr7_3:65397240-65397259 | None:intergenic | 20.0% |
| !!! | TAAGTAGTTCAAGATATTTT+TGG | + | chr7_3:65397392-65397411 | Msa1117150:intron | 20.0% |
| !!! | AAGTAGTTCAAGATATTTTT+GGG | + | chr7_3:65397393-65397412 | Msa1117150:intron | 20.0% |
| !! | CTTGTAGTTGATTATTATTT+AGG | + | chr7_3:65397464-65397483 | Msa1117150:intron | 20.0% |
| !! | TAACTATTTCATATCATGAA+TGG | - | chr7_3:65397726-65397745 | None:intergenic | 20.0% |
| !! | TATGAAATAGTTAGTCATAA+CGG | + | chr7_3:65397733-65397752 | Msa1117150:intron | 20.0% |
| !!! | TCAATTATTGATTTCAAGAA+AGG | - | chr7_3:65398184-65398203 | None:intergenic | 20.0% |
| !! | AAAATGTATTATGTATTGCT+TGG | - | chr7_3:65398348-65398367 | None:intergenic | 20.0% |
| !!! | TCACTAAAAATGTGTTTTTA+AGG | - | chr7_3:65398971-65398990 | None:intergenic | 20.0% |
| !!! | AAACACATTTTTAGTGAAAA+CGG | + | chr7_3:65398974-65398993 | Msa1117150:CDS | 20.0% |
| !! | TATCTAAACAAGAAATAAAG+AGG | + | chr7_3:65399216-65399235 | Msa1117150:intron | 20.0% |
| !! | AATAAGTTAGTATGTTTATG+TGG | - | chr7_3:65399326-65399345 | None:intergenic | 20.0% |
| !!! | ACAATTTAAAACCTTGTTTT+TGG | - | chr7_3:65399710-65399729 | None:intergenic | 20.0% |
| ! | AAGTAAACCCTATCATTAAA+AGG | - | chr7_3:65394824-65394843 | None:intergenic | 25.0% |
| ! | AAATTTCTTGACAATTGATC+TGG | - | chr7_3:65394891-65394910 | None:intergenic | 25.0% |
| !!! | AAATTTGTTAACCTTGACTT+TGG | + | chr7_3:65394905-65394924 | Msa1117150:CDS | 25.0% |
| !!! | AATTTGTTAACCTTGACTTT+GGG | + | chr7_3:65394906-65394925 | Msa1117150:CDS | 25.0% |
| ! | TAAACCATTAAATGGAAACT+GGG | - | chr7_3:65395060-65395079 | None:intergenic | 25.0% |
| ! | TTAAACCATTAAATGGAAAC+TGG | - | chr7_3:65395061-65395080 | None:intergenic | 25.0% |
| ! | CCAAATATTAGAAAACAGAA+AGG | - | chr7_3:65395125-65395144 | None:intergenic | 25.0% |
| !! | CCTTTCTGTTTTCTAATATT+TGG | + | chr7_3:65395122-65395141 | Msa1117150:intron | 25.0% |
| ! | ATAATATTTGTGGTGTGTTA+GGG | - | chr7_3:65395371-65395390 | None:intergenic | 25.0% |
| ! | AATAATATTTGTGGTGTGTT+AGG | - | chr7_3:65395372-65395391 | None:intergenic | 25.0% |
| ! | ACGAATCTTGATATATAATC+TGG | + | chr7_3:65395547-65395566 | Msa1117150:intron | 25.0% |
| ! | CAATGTTAATTAGAATGCTT+TGG | + | chr7_3:65395828-65395847 | Msa1117150:intron | 25.0% |
| !!! | CTATTCTATGGTTTTTTATG+GGG | + | chr7_3:65396221-65396240 | Msa1117150:intron | 25.0% |
| ! | ATCTTACTATGTATATAGAC+AGG | + | chr7_3:65396825-65396844 | Msa1117150:intron | 25.0% |
| ! | TATATGGTCATGTAAATGAA+TGG | - | chr7_3:65396974-65396993 | None:intergenic | 25.0% |
| !! | CGAAACATTTTATGATGAAA+TGG | + | chr7_3:65397060-65397079 | Msa1117150:intron | 25.0% |
| !! | TTATTTCTCTTTGTTTGGAT+TGG | - | chr7_3:65397235-65397254 | None:intergenic | 25.0% |
| ! | AGAAGGCTATATTTAGATTA+AGG | - | chr7_3:65397286-65397305 | None:intergenic | 25.0% |
| !!! | TATCATTTTTACTTCATCAC+TGG | + | chr7_3:65397342-65397361 | Msa1117150:intron | 25.0% |
| ! | TAACTCATAAAGTAAACACA+TGG | + | chr7_3:65397566-65397585 | Msa1117150:intron | 25.0% |
| ! | TTTAGCTGTCATAATATGAA+TGG | + | chr7_3:65397636-65397655 | Msa1117150:intron | 25.0% |
| ! | TGTCATAATATGAATGGTTA+AGG | + | chr7_3:65397642-65397661 | Msa1117150:intron | 25.0% |
| ! | GTCATAATATGAATGGTTAA+GGG | + | chr7_3:65397643-65397662 | Msa1117150:intron | 25.0% |
| ! | TACAATTTGGAAAAAAGTGA+AGG | + | chr7_3:65397682-65397701 | Msa1117150:intron | 25.0% |
| ! | ACAAACGAAGATATTATAAG+CGG | - | chr7_3:65397809-65397828 | None:intergenic | 25.0% |
| ! | GTATCATAAAGAAGAAAGTA+AGG | - | chr7_3:65398108-65398127 | None:intergenic | 25.0% |
| !!! | TTATTGATTTCAAGAAAGGA+AGG | - | chr7_3:65398180-65398199 | None:intergenic | 25.0% |
| ! | TTTCCATTAACAATATTTGC+AGG | + | chr7_3:65398820-65398839 | Msa1117150:intron | 25.0% |
| ! | AATGTATGTCATGAAAAATG+TGG | - | chr7_3:65398883-65398902 | None:intergenic | 25.0% |
| ! | ATGACATACATTATGATAGA+CGG | + | chr7_3:65398891-65398910 | Msa1117150:CDS | 25.0% |
| !!! | CTAAAAATGTGTTTTTAAGG+TGG | - | chr7_3:65398968-65398987 | None:intergenic | 25.0% |
| ! | GTTTAGATATGCATTTATCA+AGG | - | chr7_3:65399205-65399224 | None:intergenic | 25.0% |
| ! | TATGTTTATGTGGAAAAAAG+TGG | - | chr7_3:65399316-65399335 | None:intergenic | 25.0% |
| ! | TATATCTCAAATTCTTCTGA+TGG | + | chr7_3:65399496-65399515 | Msa1117150:CDS | 25.0% |
| ! | ATATCTCAAATTCTTCTGAT+GGG | + | chr7_3:65399497-65399516 | Msa1117150:CDS | 25.0% |
| ! | TTAACTTAAGACCAAAAACA+AGG | + | chr7_3:65399696-65399715 | Msa1117150:intron | 25.0% |
| !! | TTTTCAATATAGAGAAGAAC+TGG | + | chr7_3:65399738-65399757 | Msa1117150:intron | 25.0% |
| ! | TAGTTGACATCAGATATTAA+TGG | + | chr7_3:65399805-65399824 | Msa1117150:intron | 25.0% |
| ! | ACTTCAGCCTTTTAATGATA+GGG | + | chr7_3:65394814-65394833 | Msa1117150:CDS | 30.0% |
| CAAAACTATAAAAGCCAGTA+GGG | - | chr7_3:65395186-65395205 | None:intergenic | 30.0% | |
| TCAATATCGAACATTCCATT+TGG | + | chr7_3:65395284-65395303 | Msa1117150:CDS | 30.0% | |
| TTCAGTTATTATTCGGATCT+CGG | - | chr7_3:65395485-65395504 | None:intergenic | 30.0% | |
| ATATCAAGATTCGTGATACA+AGG | - | chr7_3:65395541-65395560 | None:intergenic | 30.0% | |
| AATTTCACATCATTCTGTTC+AGG | + | chr7_3:65395592-65395611 | Msa1117150:intron | 30.0% | |
| ! | AACAATGAGATTGCGATTTT+TGG | + | chr7_3:65395695-65395714 | Msa1117150:CDS | 30.0% |
| AGACTTACAGTAAATTGATC+TGG | - | chr7_3:65395738-65395757 | None:intergenic | 30.0% | |
| ! | ATGCATGTTTTACCTATGAA+GGG | - | chr7_3:65395806-65395825 | None:intergenic | 30.0% |
| ! | TATGCATGTTTTACCTATGA+AGG | - | chr7_3:65395807-65395826 | None:intergenic | 30.0% |
| !! | TGCTTTGGAGTTTATTAGTT+CGG | + | chr7_3:65395843-65395862 | Msa1117150:intron | 30.0% |
| ! | TTCTTTTATTCCATAGGTCT+TGG | + | chr7_3:65396400-65396419 | Msa1117150:intron | 30.0% |
| !!! | ATTATTTTTGTGATTCCCTG+TGG | + | chr7_3:65396597-65396616 | Msa1117150:intron | 30.0% |
| TAATCAAATGTTAGACCACA+GGG | - | chr7_3:65396615-65396634 | None:intergenic | 30.0% | |
| TTAATCAAATGTTAGACCAC+AGG | - | chr7_3:65396616-65396635 | None:intergenic | 30.0% | |
| ATGTATATAGACAGGTATGA+TGG | + | chr7_3:65396833-65396852 | Msa1117150:intron | 30.0% | |
| TGTATATAGACAGGTATGAT+GGG | + | chr7_3:65396834-65396853 | Msa1117150:intron | 30.0% | |
| CTATAAGTCAATGCGTTATA+TGG | - | chr7_3:65396990-65397009 | None:intergenic | 30.0% | |
| AAAATGTTTCGACGATGATA+TGG | - | chr7_3:65397051-65397070 | None:intergenic | 30.0% | |
| GGAAATGTCGCAAAATAAAA+TGG | - | chr7_3:65397265-65397284 | None:intergenic | 30.0% | |
| TACTTCATCACTGGATAAAA+TGG | + | chr7_3:65397351-65397370 | Msa1117150:intron | 30.0% | |
| CTTGTTCTACAGATTGTAAA+CGG | + | chr7_3:65397515-65397534 | Msa1117150:intron | 30.0% | |
| AAGTGAAGGAGAAGAATAAA+AGG | + | chr7_3:65397696-65397715 | Msa1117150:intron | 30.0% | |
| AATGGGGAAAATTTAACAAC+AGG | - | chr7_3:65397767-65397786 | None:intergenic | 30.0% | |
| ACACACAAGTAAAAACGAAT+GGG | - | chr7_3:65397784-65397803 | None:intergenic | 30.0% | |
| CAAACGAAGATATTATAAGC+GGG | - | chr7_3:65397808-65397827 | None:intergenic | 30.0% | |
| ! | TCACAGTGTTCATTTTAAAC+AGG | + | chr7_3:65397844-65397863 | Msa1117150:intron | 30.0% |
| CTAAGATTCAGGTCAAAATA+TGG | - | chr7_3:65398055-65398074 | None:intergenic | 30.0% | |
| ACTCAATGTTAGCTAAAGAT+TGG | - | chr7_3:65398144-65398163 | None:intergenic | 30.0% | |
| TAACATTGAGTCAATCAAGA+AGG | + | chr7_3:65398153-65398172 | Msa1117150:CDS | 30.0% | |
| TTCAGATGGTAAGCATTTAA+GGG | - | chr7_3:65398292-65398311 | None:intergenic | 30.0% | |
| ATTCAGATGGTAAGCATTTA+AGG | - | chr7_3:65398293-65398312 | None:intergenic | 30.0% | |
| TGCTTACCATCTGAATTATT+TGG | + | chr7_3:65398297-65398316 | Msa1117150:intron | 30.0% | |
| ! | CGTTTTCCAAATAATTCAGA+TGG | - | chr7_3:65398306-65398325 | None:intergenic | 30.0% |
| !! | TGCCTTTTTCATATTACTCA+AGG | + | chr7_3:65398368-65398387 | Msa1117150:intron | 30.0% |
| !! | GCCTTTTTCATATTACTCAA+GGG | + | chr7_3:65398369-65398388 | Msa1117150:intron | 30.0% |
| TCCCTTGAGTAATATGAAAA+AGG | - | chr7_3:65398373-65398392 | None:intergenic | 30.0% | |
| AACAAGGATAATTACTGTTG+TGG | + | chr7_3:65398402-65398421 | Msa1117150:intron | 30.0% | |
| !!! | TCCTTTTTTCATTGCTGAAA+TGG | + | chr7_3:65398427-65398446 | Msa1117150:intron | 30.0% |
| TCCATTTCAGCAATGAAAAA+AGG | - | chr7_3:65398431-65398450 | None:intergenic | 30.0% | |
| TGAATAACAGACTTTACAGA+TGG | - | chr7_3:65398507-65398526 | None:intergenic | 30.0% | |
| ATCTGTAAAGTCTGTTATTC+AGG | + | chr7_3:65398506-65398525 | Msa1117150:CDS | 30.0% | |
| TCTGTAAAGTCTGTTATTCA+GGG | + | chr7_3:65398507-65398526 | Msa1117150:CDS | 30.0% | |
| AGTTTAGACAGCTTTCATTT+CGG | + | chr7_3:65398768-65398787 | Msa1117150:intron | 30.0% | |
| GAACCTGCAAATATTGTTAA+TGG | - | chr7_3:65398826-65398845 | None:intergenic | 30.0% | |
| ATGAAAAATGTGGCTTTCAT+GGG | - | chr7_3:65398873-65398892 | None:intergenic | 30.0% | |
| TGACATACATTATGATAGAC+GGG | + | chr7_3:65398892-65398911 | Msa1117150:CDS | 30.0% | |
| TATAGCAAAATTCAAGCTAC+CGG | - | chr7_3:65399027-65399046 | None:intergenic | 30.0% | |
| ATGAAATATAACTGGATTCG+AGG | - | chr7_3:65399056-65399075 | None:intergenic | 30.0% | |
| AATCCAGTTATATTTCATGC+TGG | + | chr7_3:65399058-65399077 | Msa1117150:CDS | 30.0% | |
| ATCCAGTTATATTTCATGCT+GGG | + | chr7_3:65399059-65399078 | Msa1117150:CDS | 30.0% | |
| CAGTATACTAAATGTCAGTT+CGG | - | chr7_3:65399252-65399271 | None:intergenic | 30.0% | |
| TTCTGATTATGCTTGATTAG+CGG | + | chr7_3:65399371-65399390 | Msa1117150:intron | 30.0% | |
| GATAATCTTGTGACAAGAAA+AGG | - | chr7_3:65399399-65399418 | None:intergenic | 30.0% | |
| TCTCATATATCAGACTAATG+AGG | - | chr7_3:65399846-65399865 | None:intergenic | 30.0% | |
| ! | GATATATGAGATTTGATGAC+AGG | + | chr7_3:65399855-65399874 | Msa1117150:intron | 30.0% |
| ! | GACTTCAGCCTTTTAATGAT+AGG | + | chr7_3:65394813-65394832 | Msa1117150:CDS | 35.0% |
| ATAGGGTTTACTTCCCAAAA+TGG | + | chr7_3:65394831-65394850 | Msa1117150:CDS | 35.0% | |
| TTCCCAAAATGGTATCTGAA+GGG | + | chr7_3:65394842-65394861 | Msa1117150:CDS | 35.0% | |
| ! | CAATTGATCTGGAATTCGTT+GGG | - | chr7_3:65394880-65394899 | None:intergenic | 35.0% |
| ! | ACAATTGATCTGGAATTCGT+TGG | - | chr7_3:65394881-65394900 | None:intergenic | 35.0% |
| CCAAAACTATAAAAGCCAGT+AGG | - | chr7_3:65395187-65395206 | None:intergenic | 35.0% | |
| !!! | CCTACTGGCTTTTATAGTTT+TGG | + | chr7_3:65395184-65395203 | Msa1117150:CDS | 35.0% |
| !!! | TAGTTTTGGTTCCCATTAAC+TGG | + | chr7_3:65395198-65395217 | Msa1117150:CDS | 35.0% |
| ! | GTTTTTCCAGTCCAGTTAAT+GGG | - | chr7_3:65395212-65395231 | None:intergenic | 35.0% |
| ! | AGTTTTTCCAGTCCAGTTAA+TGG | - | chr7_3:65395213-65395232 | None:intergenic | 35.0% |
| ! | TAACTGGACTGGAAAAACTT+TGG | + | chr7_3:65395214-65395233 | Msa1117150:CDS | 35.0% |
| ACATTCCATTTGGATCAAAG+AGG | + | chr7_3:65395294-65395313 | Msa1117150:CDS | 35.0% | |
| GCTTGAACAACTTTGTGAAA+TGG | - | chr7_3:65395329-65395348 | None:intergenic | 35.0% | |
| !! | ACATCATTCTGTTCAGGTTT+TGG | + | chr7_3:65395598-65395617 | Msa1117150:intron | 35.0% |
| !! | CATCATTCTGTTCAGGTTTT+GGG | + | chr7_3:65395599-65395618 | Msa1117150:intron | 35.0% |
| GACATGCTATAGTCTTTACA+AGG | + | chr7_3:65395656-65395675 | Msa1117150:CDS | 35.0% | |
| !!! | TTTTTTTATGGGATGCGCAA+AGG | + | chr7_3:65395975-65395994 | Msa1117150:intron | 35.0% |
| ACACACACACAATCACATAT+AGG | - | chr7_3:65396006-65396025 | None:intergenic | 35.0% | |
| ATTACTACTATTTCCCCTGT+TGG | - | chr7_3:65396136-65396155 | None:intergenic | 35.0% | |
| TCTCATTGTTGTCACAAGTA+CGG | - | chr7_3:65396172-65396191 | None:intergenic | 35.0% | |
| CAGCTTGTGAAACTATTCTA+TGG | + | chr7_3:65396209-65396228 | Msa1117150:intron | 35.0% | |
| TTATTCCATAGGTCTTGGTT+AGG | + | chr7_3:65396405-65396424 | Msa1117150:intron | 35.0% | |
| ! | TGACTGATTCATCCATATCT+GGG | - | chr7_3:65396439-65396458 | None:intergenic | 35.0% |
| AGAAGAAGAGATTGCAAAAC+TGG | + | chr7_3:65396693-65396712 | Msa1117150:CDS | 35.0% | |
| CTCTGCAGTATAGTAATCAA+TGG | - | chr7_3:65396883-65396902 | None:intergenic | 35.0% | |
| AATGGATATGCAGATCAGTT+AGG | + | chr7_3:65397369-65397388 | Msa1117150:intron | 35.0% | |
| CGTTTACAATCTGTAGAACA+AGG | - | chr7_3:65397517-65397536 | None:intergenic | 35.0% | |
| GATAATGTGAGGCTACAATT+TGG | + | chr7_3:65397669-65397688 | Msa1117150:intron | 35.0% | |
| CACACAAGTAAAAACGAATG+GGG | - | chr7_3:65397783-65397802 | None:intergenic | 35.0% | |
| CACACACAAGTAAAAACGAA+TGG | - | chr7_3:65397785-65397804 | None:intergenic | 35.0% | |
| TGAATGAAACAAATGCTGCA+GGG | - | chr7_3:65397916-65397935 | None:intergenic | 35.0% | |
| TTGAATGAAACAAATGCTGC+AGG | - | chr7_3:65397917-65397936 | None:intergenic | 35.0% | |
| TTGTTTCATTCAAAACCCGA+TGG | + | chr7_3:65397924-65397943 | Msa1117150:CDS | 35.0% | |
| TGTTTCATTCAAAACCCGAT+GGG | + | chr7_3:65397925-65397944 | Msa1117150:CDS | 35.0% | |
| !! | TGAGCAATCTTCTAAGATTC+AGG | - | chr7_3:65398066-65398085 | None:intergenic | 35.0% |
| AAGGAAAAACAAAGAGACAG+TGG | - | chr7_3:65398089-65398108 | None:intergenic | 35.0% | |
| AAAGATTGGACAAAGGCTAT+AGG | - | chr7_3:65398130-65398149 | None:intergenic | 35.0% | |
| GTTAGCTAAAGATTGGACAA+AGG | - | chr7_3:65398137-65398156 | None:intergenic | 35.0% | |
| ! | TTATGTATTGCTTGGTTCGA+GGG | - | chr7_3:65398340-65398359 | None:intergenic | 35.0% |
| ! | ATTATGTATTGCTTGGTTCG+AGG | - | chr7_3:65398341-65398360 | None:intergenic | 35.0% |
| CAAGGGAATTATCATCAACA+AGG | + | chr7_3:65398386-65398405 | Msa1117150:intron | 35.0% | |
| GTAATGAAGTTACTCATTGC+AGG | + | chr7_3:65398481-65398500 | Msa1117150:CDS | 35.0% | |
| AATAACTTTAATGCTAGCCC+TGG | - | chr7_3:65398540-65398559 | None:intergenic | 35.0% | |
| ATGGCAATGTCCAAAATAGA+AGG | + | chr7_3:65398585-65398604 | Msa1117150:CDS | 35.0% | |
| ! | CGATGAGTAACCTTCTATTT+TGG | - | chr7_3:65398598-65398617 | None:intergenic | 35.0% |
| TGAAAAATGTGGCTTTCATG+GGG | - | chr7_3:65398872-65398891 | None:intergenic | 35.0% | |
| CATGAAAAATGTGGCTTTCA+TGG | - | chr7_3:65398874-65398893 | None:intergenic | 35.0% | |
| ATACATTATGATAGACGGGT+GGG | + | chr7_3:65398896-65398915 | Msa1117150:CDS | 35.0% | |
| TGATTAACGAAGATAACCTG+AGG | - | chr7_3:65398941-65398960 | None:intergenic | 35.0% | |
| ATAGCAAAATTCAAGCTACC+GGG | - | chr7_3:65399026-65399045 | None:intergenic | 35.0% | |
| TCCAGTTATATTTCATGCTG+GGG | + | chr7_3:65399060-65399079 | Msa1117150:CDS | 35.0% | |
| ACAATGAAGGGAAGAAGTAA+AGG | - | chr7_3:65399107-65399126 | None:intergenic | 35.0% | |
| GCAAAGAAGACTACAATGAA+GGG | - | chr7_3:65399119-65399138 | None:intergenic | 35.0% | |
| AGCAAAGAAGACTACAATGA+AGG | - | chr7_3:65399120-65399139 | None:intergenic | 35.0% | |
| !!! | CTTCTTTGCTTTTTCCTACA+TGG | + | chr7_3:65399130-65399149 | Msa1117150:CDS | 35.0% |
| ! | CTTTTTCCTACATGGTCTAT+CGG | + | chr7_3:65399138-65399157 | Msa1117150:CDS | 35.0% |
| TTCAAGTGTATCTTTCACCA+TGG | - | chr7_3:65399884-65399903 | None:intergenic | 35.0% | |
| TGGTGAAAGATACACTTGAA+CGG | + | chr7_3:65399884-65399903 | Msa1117150:CDS | 35.0% | |
| ! | TAATGTCTCAGGTTCAAGTT+TGG | - | chr7_3:65399919-65399938 | None:intergenic | 35.0% |
| CATCTTGAAGATAATGTCTC+AGG | - | chr7_3:65399930-65399949 | None:intergenic | 35.0% | |
| ! | ATACGTACACCCAGTTTTTA+AGG | + | chr7_3:65399951-65399970 | Msa1117150:CDS | 35.0% |
| ! | TACGTACACCCAGTTTTTAA+GGG | + | chr7_3:65399952-65399971 | Msa1117150:CDS | 35.0% |
| ACTCATCACCCTTAAAAACT+GGG | - | chr7_3:65399963-65399982 | None:intergenic | 35.0% | |
| AACTCATCACCCTTAAAAAC+TGG | - | chr7_3:65399964-65399983 | None:intergenic | 35.0% | |
| !! | AGTGAACATTGATGATGAAG+AGG | + | chr7_3:65399993-65400012 | Msa1117150:CDS | 35.0% |
| CTAGCTTCATTATCAGATTC+TGG | - | chr7_3:65400063-65400082 | None:intergenic | 35.0% | |
| CTTCCCAAAATGGTATCTGA+AGG | + | chr7_3:65394841-65394860 | Msa1117150:CDS | 40.0% | |
| TCCCAAAATGGTATCTGAAG+GGG | + | chr7_3:65394843-65394862 | Msa1117150:CDS | 40.0% | |
| ! | TCCCCTTCAGATACCATTTT+GGG | - | chr7_3:65394847-65394866 | None:intergenic | 40.0% |
| ! | ATCCCCTTCAGATACCATTT+TGG | - | chr7_3:65394848-65394867 | None:intergenic | 40.0% |
| TAATGTAGGTCCCAAAGTCA+AGG | - | chr7_3:65394919-65394938 | None:intergenic | 40.0% | |
| !! | TTGACTTTGGGACCTACATT+AGG | + | chr7_3:65394918-65394937 | Msa1117150:CDS | 40.0% |
| CCAATTGAGGAACCTAATGT+AGG | - | chr7_3:65394933-65394952 | None:intergenic | 40.0% | |
| CCTACATTAGGTTCCTCAAT+TGG | + | chr7_3:65394930-65394949 | Msa1117150:CDS | 40.0% | |
| TGATCAATAAGCTCAGGTTC+AGG | - | chr7_3:65394977-65394996 | None:intergenic | 40.0% | |
| TTGACTCAGCCGTCTTTATT+CGG | + | chr7_3:65395005-65395024 | Msa1117150:CDS | 40.0% | |
| TGCACCCAGTTTCCATTTAA+TGG | + | chr7_3:65395053-65395072 | Msa1117150:intron | 40.0% | |
| TAAAAGCCAGTAGGGTAGTT+GGG | - | chr7_3:65395178-65395197 | None:intergenic | 40.0% | |
| ATAAAAGCCAGTAGGGTAGT+TGG | - | chr7_3:65395179-65395198 | None:intergenic | 40.0% | |
| ATCGCTAAATGTCAAACCCT+TGG | - | chr7_3:65395252-65395271 | None:intergenic | 40.0% | |
| TTTGTGGTGTGTTAGGGAAA+AGG | - | chr7_3:65395365-65395384 | None:intergenic | 40.0% | |
| ATTGCTTCTCTTCCCTTCAT+AGG | + | chr7_3:65395791-65395810 | Msa1117150:intron | 40.0% | |
| AGAGCTTGACGAATACAAAC+TGG | - | chr7_3:65395924-65395943 | None:intergenic | 40.0% | |
| GTCAAGCTCTATACGCAAAA+GGG | + | chr7_3:65395934-65395953 | Msa1117150:intron | 40.0% | |
| TGTTGTCACAAGTACGGAAA+AGG | - | chr7_3:65396166-65396185 | None:intergenic | 40.0% | |
| ! | CCACTTTCCAATGGAGTTTT+GGG | + | chr7_3:65396244-65396263 | Msa1117150:intron | 40.0% |
| GCTCAAGGACAACTCAAAAT+TGG | - | chr7_3:65396343-65396362 | None:intergenic | 40.0% | |
| ! | AACAACATTCAGCTTGCTCA+AGG | - | chr7_3:65396358-65396377 | None:intergenic | 40.0% |
| ACATTCCTAACCAAGACCTA+TGG | - | chr7_3:65396413-65396432 | None:intergenic | 40.0% | |
| ! | ACTGATTCATCCATATCTGG+GGG | - | chr7_3:65396437-65396456 | None:intergenic | 40.0% |
| ! | GACTGATTCATCCATATCTG+GGG | - | chr7_3:65396438-65396457 | None:intergenic | 40.0% |
| ! | CTGACTGATTCATCCATATC+TGG | - | chr7_3:65396440-65396459 | None:intergenic | 40.0% |
| TGATGCATCAGATAGTGATC+AGG | - | chr7_3:65396497-65396516 | None:intergenic | 40.0% | |
| ! | GAGTAGTTGGTCTCTTTGAA+GGG | - | chr7_3:65396751-65396770 | None:intergenic | 40.0% |
| CTTCAAAGAGACCAACTACT+CGG | + | chr7_3:65396750-65396769 | Msa1117150:CDS | 40.0% | |
| TTCAAAGAGACCAACTACTC+GGG | + | chr7_3:65396751-65396770 | Msa1117150:CDS | 40.0% | |
| !! | CGCATTGACTTATAGATGTG+TGG | + | chr7_3:65396995-65397014 | Msa1117150:intron | 40.0% |
| TCTCATTTCGCACGCTAATT+AGG | + | chr7_3:65397437-65397456 | Msa1117150:intron | 40.0% | |
| ATTTCGCACGCTAATTAGGT+TGG | + | chr7_3:65397441-65397460 | Msa1117150:intron | 40.0% | |
| ! | GTTAAGGGCATGATAATGTG+AGG | + | chr7_3:65397658-65397677 | Msa1117150:intron | 40.0% |
| GTTTCATTCAAAACCCGATG+GGG | + | chr7_3:65397926-65397945 | Msa1117150:CDS | 40.0% | |
| TTTCATTCAAAACCCGATGG+GGG | + | chr7_3:65397927-65397946 | Msa1117150:CDS | 40.0% | |
| AAACTAGCGATCCTACCATT+TGG | + | chr7_3:65397975-65397994 | Msa1117150:CDS | 40.0% | |
| TACCATTTGGCTGACAGAAT+GGG | + | chr7_3:65397988-65398007 | Msa1117150:CDS | 40.0% | |
| ! | TATGTATTGCTTGGTTCGAG+GGG | - | chr7_3:65398339-65398358 | None:intergenic | 40.0% |
| TTATTCAGGGATTTCTGCCA+GGG | + | chr7_3:65398520-65398539 | Msa1117150:CDS | 40.0% | |
| !! | CTATTTTGGACATTGCCATG+AGG | - | chr7_3:65398584-65398603 | None:intergenic | 40.0% |
| ! | TTACTCATCGCTCTCTGTTT+TGG | + | chr7_3:65398608-65398627 | Msa1117150:CDS | 40.0% |
| !! | TTCCTTGGAAGCATTGTAAC+AGG | + | chr7_3:65398678-65398697 | Msa1117150:CDS | 40.0% |
| TTCCTGTTACAATGCTTCCA+AGG | - | chr7_3:65398683-65398702 | None:intergenic | 40.0% | |
| !! | TGGAAGCATTGTAACAGGAA+CGG | + | chr7_3:65398683-65398702 | Msa1117150:CDS | 40.0% |
| TGCAGGTTCACAAAAACTGT+TGG | + | chr7_3:65398837-65398856 | Msa1117150:intron | 40.0% | |
| CATACATTATGATAGACGGG+TGG | + | chr7_3:65398895-65398914 | Msa1117150:CDS | 40.0% | |
| AACTCTATTCAGAACTCACC+TGG | - | chr7_3:65399166-65399185 | None:intergenic | 40.0% | |
| TATAACCAGCAATACGAGAG+TGG | + | chr7_3:65399425-65399444 | Msa1117150:intron | 40.0% | |
| TCAAACCGATAACTACTCGA+CGG | - | chr7_3:65399475-65399494 | None:intergenic | 40.0% | |
| ATGGGATTGCTTAGTACAAG+AGG | + | chr7_3:65399515-65399534 | Msa1117150:CDS | 40.0% | |
| TGGTTCCACCTATATTGCAA+AGG | + | chr7_3:65399587-65399606 | Msa1117150:CDS | 40.0% | |
| GGTTCCACCTATATTGCAAA+GGG | + | chr7_3:65399588-65399607 | Msa1117150:CDS | 40.0% | |
| ATTCGTAAAATACCCCCTAG+AGG | + | chr7_3:65399625-65399644 | Msa1117150:CDS | 40.0% | |
| AACTGCTTAACCAACCTCTA+GGG | - | chr7_3:65399642-65399661 | None:intergenic | 40.0% | |
| TAACTGCTTAACCAACCTCT+AGG | - | chr7_3:65399643-65399662 | None:intergenic | 40.0% | |
| ! | AAGAACTGGTTGATGTCATG+CGG | + | chr7_3:65399752-65399771 | Msa1117150:intron | 40.0% |
| GGTGAAAGATACACTTGAAC+GGG | + | chr7_3:65399885-65399904 | Msa1117150:CDS | 40.0% | |
| GCTCTCTTTGTCTGAATAAG+AGG | - | chr7_3:65400024-65400043 | None:intergenic | 40.0% | |
| TTCAGACAAAGAGAGCTTGT+CGG | + | chr7_3:65400028-65400047 | Msa1117150:CDS | 40.0% | |
| ! | TTCCGCAACCATGTTCCTTT+TGG | + | chr7_3:65394775-65394794 | Msa1117150:CDS | 45.0% |
| TGCAAACGCCAAAAGGAACA+TGG | - | chr7_3:65394786-65394805 | None:intergenic | 45.0% | |
| CCTGCATGATCAATAAGCTC+AGG | - | chr7_3:65394983-65395002 | None:intergenic | 45.0% | |
| CCTGAGCTTATTGATCATGC+AGG | + | chr7_3:65394980-65394999 | Msa1117150:CDS | 45.0% | |
| GAATAAAGACGGCTGAGTCA+AGG | - | chr7_3:65395006-65395025 | None:intergenic | 45.0% | |
| ATTTGTCCCAACTACCCTAC+TGG | + | chr7_3:65395169-65395188 | Msa1117150:CDS | 45.0% | |
| TTGGTTCCCATTAACTGGAC+TGG | + | chr7_3:65395203-65395222 | Msa1117150:CDS | 45.0% | |
| TCGGATCTCGGACTCTTAAT+TGG | - | chr7_3:65395473-65395492 | None:intergenic | 45.0% | |
| !!! | TTCAGGTTTTGGGCGCATAT+TGG | + | chr7_3:65395609-65395628 | Msa1117150:intron | 45.0% |
| TGTCGTATGTCTTCTCAGCT+TGG | + | chr7_3:65395634-65395653 | Msa1117150:CDS | 45.0% | |
| CGTCAAGCTCTATACGCAAA+AGG | + | chr7_3:65395933-65395952 | Msa1117150:intron | 45.0% | |
| ACCAGCGCTTAGTAAGTAAG+CGG | + | chr7_3:65396096-65396115 | Msa1117150:intron | 45.0% | |
| ! | TTTATGGGGCCACTTTCCAA+TGG | + | chr7_3:65396235-65396254 | Msa1117150:intron | 45.0% |
| !! | GCCACTTTCCAATGGAGTTT+TGG | + | chr7_3:65396243-65396262 | Msa1117150:intron | 45.0% |
| CCCAAAACTCCATTGGAAAG+TGG | - | chr7_3:65396247-65396266 | None:intergenic | 45.0% | |
| !!! | TCCAATGGAGTTTTGGGTTG+CGG | + | chr7_3:65396250-65396269 | Msa1117150:intron | 45.0% |
| TAGGAATGTTCCCCCAGATA+TGG | + | chr7_3:65396424-65396443 | Msa1117150:CDS | 45.0% | |
| GCATCAGATAGTGATCAGGA+TGG | - | chr7_3:65396493-65396512 | None:intergenic | 45.0% | |
| ! | CGAGTAGTTGGTCTCTTTGA+AGG | - | chr7_3:65396752-65396771 | None:intergenic | 45.0% |
| AAGAAAGCTACCCGAGTAGT+TGG | - | chr7_3:65396764-65396783 | None:intergenic | 45.0% | |
| ! | ACTCGGGTAGCTTTCTTTTC+AGG | + | chr7_3:65396767-65396786 | Msa1117150:intron | 45.0% |
| !! | ACAGGTATGATGGGTCTCTT+GGG | + | chr7_3:65396843-65396862 | Msa1117150:CDS | 45.0% |
| GGTTGTCTCGCTAGTTATGT+TGG | + | chr7_3:65397485-65397504 | Msa1117150:intron | 45.0% | |
| CTGCAGGGATAATAGCATTG+GGG | - | chr7_3:65397901-65397920 | None:intergenic | 45.0% | |
| GCTGCAGGGATAATAGCATT+GGG | - | chr7_3:65397902-65397921 | None:intergenic | 45.0% | |
| TGCTGCAGGGATAATAGCAT+TGG | - | chr7_3:65397903-65397922 | None:intergenic | 45.0% | |
| TTCATTCAAAACCCGATGGG+GGG | + | chr7_3:65397928-65397947 | Msa1117150:CDS | 45.0% | |
| CATTCTGTCAGCCAAATGGT+AGG | - | chr7_3:65397989-65398008 | None:intergenic | 45.0% | |
| CTACCATTTGGCTGACAGAA+TGG | + | chr7_3:65397987-65398006 | Msa1117150:CDS | 45.0% | |
| ! | TTTTCCCAGTAGACATCCCT+AGG | - | chr7_3:65398022-65398041 | None:intergenic | 45.0% |
| GTTATTCAGGGATTTCTGCC+AGG | + | chr7_3:65398519-65398538 | Msa1117150:CDS | 45.0% | |
| ATTGCTTCCAAGTGTCCTCA+TGG | + | chr7_3:65398566-65398585 | Msa1117150:CDS | 45.0% | |
| !!! | CATCGCTCTCTGTTTTGGAA+CGG | + | chr7_3:65398613-65398632 | Msa1117150:CDS | 45.0% |
| GTTCTCGTCAATGTGTTCCT+TGG | + | chr7_3:65398663-65398682 | Msa1117150:CDS | 45.0% | |
| GAATAGCTGGAGAAATCCTC+AGG | + | chr7_3:65398922-65398941 | Msa1117150:CDS | 45.0% | |
| GCAAGACAGACAGAATGCTA+TGG | + | chr7_3:65398998-65399017 | Msa1117150:CDS | 45.0% | |
| AGACAGAATGCTATGGATCC+CGG | + | chr7_3:65399005-65399024 | Msa1117150:CDS | 45.0% | |
| GCCCCAGCATGAAATATAAC+TGG | - | chr7_3:65399064-65399083 | None:intergenic | 45.0% | |
| ! | GGAAGAAGTAAAGGTGTGAC+TGG | - | chr7_3:65399098-65399117 | None:intergenic | 45.0% |
| TGGAACCAGATTGTCAAGAC+AGG | - | chr7_3:65399575-65399594 | None:intergenic | 45.0% | |
| GTAAAATACCCCCTAGAGGT+TGG | + | chr7_3:65399629-65399648 | Msa1117150:intron | 45.0% | |
| ACTGCTTAACCAACCTCTAG+GGG | - | chr7_3:65399641-65399660 | None:intergenic | 45.0% | |
| ! | GATTTGATGACAGGATGCCA+TGG | + | chr7_3:65399864-65399883 | Msa1117150:intron | 45.0% |
| CATAGCTGCTGTTGTAGAAC+TGG | - | chr7_3:65400094-65400113 | None:intergenic | 45.0% | |
| GCCAGCAGAAACACCAATGT+CGG | - | chr7_3:65394744-65394763 | None:intergenic | 50.0% | |
| GGAACATGGTTGCGGAAAAC+AGG | - | chr7_3:65394772-65394791 | None:intergenic | 50.0% | |
| CGCCAAAAGGAACATGGTTG+CGG | - | chr7_3:65394780-65394799 | None:intergenic | 50.0% | |
| GCAACACTGCAAACGCCAAA+AGG | - | chr7_3:65394793-65394812 | None:intergenic | 50.0% | |
| ATGCTGCAGGCATCCAATTG+AGG | - | chr7_3:65394946-65394965 | None:intergenic | 50.0% | |
| TCAGGCATATGCAATGCTGC+AGG | - | chr7_3:65394959-65394978 | None:intergenic | 50.0% | |
| AATGTCAAACCCTTGGCTGC+TGG | - | chr7_3:65395245-65395264 | None:intergenic | 50.0% | |
| GCGCACCTCTTTGATCCAAA+TGG | - | chr7_3:65395302-65395321 | None:intergenic | 50.0% | |
| GCAGCTAAGCTAATATGCGC+CGG | + | chr7_3:65396050-65396069 | Msa1117150:intron | 50.0% | |
| !! | ACTAAGCGCTGGTTCTATCC+CGG | - | chr7_3:65396089-65396108 | None:intergenic | 50.0% |
| AGCGCTTAGTAAGTAAGCGG+CGG | + | chr7_3:65396099-65396118 | Msa1117150:intron | 50.0% | |
| TACTATTTCCCCTGTTGGCC+GGG | - | chr7_3:65396131-65396150 | None:intergenic | 50.0% | |
| CTACTATTTCCCCTGTTGGC+CGG | - | chr7_3:65396132-65396151 | None:intergenic | 50.0% | |
| !! | GACAGGTATGATGGGTCTCT+TGG | + | chr7_3:65396842-65396861 | Msa1117150:intron | 50.0% |
| !! | CAGGTATGATGGGTCTCTTG+GGG | + | chr7_3:65396844-65396863 | Msa1117150:CDS | 50.0% |
| AGCCCATTCTGTCAGCCAAA+TGG | - | chr7_3:65397993-65398012 | None:intergenic | 50.0% | |
| AGAGCCTAGGGATGTCTACT+GGG | + | chr7_3:65398015-65398034 | Msa1117150:CDS | 50.0% | |
| GACATTGCCATGAGGACACT+TGG | - | chr7_3:65398576-65398595 | None:intergenic | 50.0% | |
| CAATGAGCCCTCTTCAGAGT+AGG | + | chr7_3:65398731-65398750 | Msa1117150:intron | 50.0% | |
| ! | CTCAGAGCCTACTCTGAAGA+GGG | - | chr7_3:65398741-65398760 | None:intergenic | 50.0% |
| ATTATGATAGACGGGTGGGC+TGG | + | chr7_3:65398900-65398919 | Msa1117150:CDS | 50.0% | |
| TTGCTCCACTCTCGTATTGC+TGG | - | chr7_3:65399433-65399452 | None:intergenic | 50.0% | |
| ! | ACGAGAGTGGAGCAACGTTT+TGG | + | chr7_3:65399438-65399457 | Msa1117150:CDS | 50.0% |
| GTCCACCGTCGAGTAGTTAT+CGG | + | chr7_3:65399467-65399486 | Msa1117150:CDS | 50.0% | |
| AACCGATAACTACTCGACGG+TGG | - | chr7_3:65399472-65399491 | None:intergenic | 50.0% | |
| CGCAACCTGTCTTGACAATC+TGG | + | chr7_3:65399567-65399586 | Msa1117150:CDS | 50.0% | |
| AGCGCCCTTTGCAATATAGG+TGG | - | chr7_3:65399595-65399614 | None:intergenic | 50.0% | |
| ! | CGAAGCGCCCTTTGCAATAT+AGG | - | chr7_3:65399598-65399617 | None:intergenic | 50.0% |
| CTGCTTAACCAACCTCTAGG+GGG | - | chr7_3:65399640-65399659 | None:intergenic | 50.0% | |
| ATGGCGACTCTAGCCGACAT+TGG | + | chr7_3:65394728-65394747 | Msa1117150:CDS | 55.0% | |
| ! | GCCGACATTGGTGTTTCTGC+TGG | + | chr7_3:65394740-65394759 | Msa1117150:CDS | 55.0% |
| !! | TTTGGAAGCACCAGCAGCCA+AGG | + | chr7_3:65395232-65395251 | Msa1117150:CDS | 55.0% |
| !! | TTGGAAGCACCAGCAGCCAA+GGG | + | chr7_3:65395233-65395252 | Msa1117150:CDS | 55.0% |
| AATATGCGCCGGAGAAAGCC+AGG | + | chr7_3:65396061-65396080 | Msa1117150:intron | 55.0% | |
| GCCGCTTACTTACTAAGCGC+TGG | - | chr7_3:65396100-65396119 | None:intergenic | 55.0% | |
| AGTAAGCGGCGGTTCTATCC+CGG | + | chr7_3:65396110-65396129 | Msa1117150:intron | 55.0% | |
| GCCGCAACCCAAAACTCCAT+TGG | - | chr7_3:65396254-65396273 | None:intergenic | 55.0% | |
| ATTCAAAACCCGATGGGGGG+CGG | + | chr7_3:65397931-65397950 | Msa1117150:CDS | 55.0% | |
| ! | AGAATGGGCTCCAGAGCCTA+GGG | + | chr7_3:65398003-65398022 | Msa1117150:CDS | 55.0% |
| CAGTAGACATCCCTAGGCTC+TGG | - | chr7_3:65398016-65398035 | None:intergenic | 55.0% | |
| CAGAGCCTAGGGATGTCTAC+TGG | + | chr7_3:65398014-65398033 | Msa1117150:CDS | 55.0% | |
| ! | GCTCAGAGCCTACTCTGAAG+AGG | - | chr7_3:65398742-65398761 | None:intergenic | 55.0% |
| !! | CTGGTGCCGATAGACCATGT+AGG | - | chr7_3:65399147-65399166 | None:intergenic | 55.0% |
| CTACATGGTCTATCGGCACC+AGG | + | chr7_3:65399145-65399164 | Msa1117150:CDS | 55.0% | |
| ACTACTCGACGGTGGACATC+TGG | - | chr7_3:65399464-65399483 | None:intergenic | 55.0% | |
| CGGTTCTATCCCGGCCAACA+GGG | + | chr7_3:65396119-65396138 | Msa1117150:intron | 60.0% | |
| GGTTCTATCCCGGCCAACAG+GGG | + | chr7_3:65396120-65396139 | Msa1117150:intron | 60.0% | |
| ! | CAGAATGGGCTCCAGAGCCT+AGG | + | chr7_3:65398002-65398021 | Msa1117150:CDS | 60.0% |
| ! | TCCCGGCACCTGGCTTTCTC+CGG | - | chr7_3:65396072-65396091 | None:intergenic | 65.0% |
| !! | GCTGGTTCTATCCCGGCACC+TGG | - | chr7_3:65396082-65396101 | None:intergenic | 65.0% |
| GCGGTTCTATCCCGGCCAAC+AGG | + | chr7_3:65396118-65396137 | Msa1117150:intron | 65.0% | |
| !! | GACGGGTGGGCTGGAATAGC+TGG | + | chr7_3:65398909-65398928 | Msa1117150:CDS | 65.0% |
| CGCCGGAGAAAGCCAGGTGC+CGG | + | chr7_3:65396067-65396086 | Msa1117150:intron | 70.0% | |
| GCCGGAGAAAGCCAGGTGCC+GGG | + | chr7_3:65396068-65396087 | Msa1117150:intron | 70.0% | |
| GCATACAGCCGCCCCCCATC+GGG | - | chr7_3:65397942-65397961 | None:intergenic | 70.0% | |
| CGCATACAGCCGCCCCCCAT+CGG | - | chr7_3:65397943-65397962 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 65394728 | 65400116 | 65394728 | ID=Msa1117150;Name=Msa1117150 |
| chr7_3 | mRNA | 65394728 | 65400116 | 65394728 | ID=Msa1117150-mRNA-1;Parent=Msa1117150;Name=Msa1117150-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|11|0|754 |
| chr7_3 | exon | 65394728 | 65395041 | 65394728 | ID=Msa1117150-mRNA-1:exon:15548;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65395160 | 65395315 | 65395160 | ID=Msa1117150-mRNA-1:exon:15549;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65395614 | 65395749 | 65395614 | ID=Msa1117150-mRNA-1:exon:15550;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65396416 | 65396517 | 65396416 | ID=Msa1117150-mRNA-1:exon:15551;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65396653 | 65396772 | 65396653 | ID=Msa1117150-mRNA-1:exon:15552;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65396843 | 65396923 | 65396843 | ID=Msa1117150-mRNA-1:exon:15553;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65397866 | 65398174 | 65397866 | ID=Msa1117150-mRNA-1:exon:15554;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65398480 | 65398748 | 65398480 | ID=Msa1117150-mRNA-1:exon:15555;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65398842 | 65399166 | 65398842 | ID=Msa1117150-mRNA-1:exon:15556;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65399434 | 65399646 | 65399434 | ID=Msa1117150-mRNA-1:exon:15557;Parent=Msa1117150-mRNA-1 |
| chr7_3 | exon | 65399877 | 65400116 | 65399877 | ID=Msa1117150-mRNA-1:exon:15558;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65394728 | 65395041 | 65394728 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65395160 | 65395315 | 65395160 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65395614 | 65395749 | 65395614 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65396416 | 65396517 | 65396416 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65396653 | 65396772 | 65396653 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65396843 | 65396923 | 65396843 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65397866 | 65398174 | 65397866 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65398480 | 65398748 | 65398480 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65398842 | 65399166 | 65398842 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65399434 | 65399646 | 65399434 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| chr7_3 | CDS | 65399877 | 65400116 | 65399877 | ID=Msa1117150-mRNA-1:cds;Parent=Msa1117150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
