AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1275510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275510 MtrunA17_Chr8g0342451 98.588 425 6 0 1 425 1 425 0.0 868
Msa1275510 MtrunA17_Chr2g0330161 58.295 434 169 4 1 425 1 431 3.54e-176 499
Msa1275510 MtrunA17_Chr8g0366411 31.879 298 160 9 32 325 76 334 2.57e-28 116
Msa1275510 MtrunA17_Chr4g0049031 28.782 271 154 8 33 301 26 259 7.48e-27 112
Msa1275510 MtrunA17_Chr3g0085901 29.259 270 140 8 35 301 11 232 3.22e-26 108
Msa1275510 MtrunA17_Chr7g0221741 36.548 197 101 7 27 216 8 187 1.48e-24 103
Msa1275510 MtrunA17_Chr5g0440681 32.787 183 113 2 34 216 24 196 2.98e-24 103
Msa1275510 MtrunA17_Chr7g0252201 27.143 280 162 8 27 301 8 250 6.93e-24 100
Msa1275510 MtrunA17_Chr4g0023631 29.412 306 179 8 24 327 4 274 5.24e-23 100
Msa1275510 MtrunA17_Chr3g0085941 27.574 272 152 8 34 301 13 243 1.37e-22 98.2
Msa1275510 MtrunA17_Chr3g0104731 29.964 277 145 10 34 301 18 254 3.06e-22 95.9
Msa1275510 MtrunA17_Chr5g0424701 25.455 275 162 7 35 306 16 250 8.58e-22 94.4
Msa1275510 MtrunA17_Chr5g0427711 28.881 277 151 10 35 304 3 240 2.07e-21 94.7
Msa1275510 MtrunA17_Chr1g0199541 29.779 272 148 10 34 300 24 257 7.07e-21 92.0
Msa1275510 MtrunA17_Chr3g0099441 28.731 268 157 6 34 280 26 280 9.65e-21 94.4
Msa1275510 MtrunA17_Chr6g0486911 29.242 277 151 10 35 306 21 257 1.03e-20 93.6
Msa1275510 MtrunA17_Chr3g0084241 28.808 302 164 14 35 327 7 266 1.13e-20 93.2
Msa1275510 MtrunA17_Chr3g0091201 34.409 186 107 5 38 216 32 209 2.24e-20 91.7
Msa1275510 MtrunA17_Chr7g0249591 27.881 269 155 7 35 302 14 244 2.25e-20 92.8
Msa1275510 MtrunA17_Chr3g0099461 27.888 251 149 4 34 260 26 268 3.13e-20 92.4
Msa1275510 MtrunA17_Chr3g0084261 27.508 309 175 9 34 334 24 291 5.08e-20 91.3
Msa1275510 MtrunA17_Chr1g0181881 34.058 138 84 2 35 172 18 148 1.45e-19 85.5
Msa1275510 MtrunA17_Chr8g0362531 29.348 276 174 7 11 280 21 281 1.55e-19 90.1
Msa1275510 MtrunA17_Chr6g0460041 28.044 271 151 7 34 301 39 268 2.36e-19 88.2
Msa1275510 MtrunA17_Chr4g0049041 31.746 189 119 4 34 216 23 207 2.88e-19 89.4
Msa1275510 MtrunA17_Chr6g0457641 27.798 277 144 9 34 301 50 279 5.84e-19 87.8
Msa1275510 MtrunA17_Chr4g0011401 31.250 192 115 6 33 216 143 325 1.21e-18 88.2
Msa1275510 MtrunA17_Chr3g0085961 25.902 305 190 10 35 328 14 293 1.45e-18 87.0
Msa1275510 MtrunA17_Chr4g0011331 29.412 289 146 12 35 316 153 390 2.00e-18 87.0
Msa1275510 MtrunA17_Chr3g0082451 30.769 273 141 12 34 301 9 238 4.71e-18 85.5
Msa1275510 MtrunA17_Chr6g0488371 34.783 138 87 2 36 172 11 146 5.86e-18 82.4
Msa1275510 MtrunA17_Chr3g0136291 29.902 204 119 8 36 232 14 200 6.56e-18 84.3
Msa1275510 MtrunA17_Chr3g0104721 28.159 277 153 10 34 301 27 266 6.73e-18 84.0
Msa1275510 MtrunA17_Chr4g0049111 29.717 212 113 6 35 243 42 220 8.96e-18 85.5
Msa1275510 MtrunA17_Chr3g0082431 32.579 221 111 8 34 252 9 193 9.63e-18 84.3
Msa1275510 MtrunA17_Chr7g0220351 32.161 199 109 6 32 216 144 330 1.22e-17 85.1
Msa1275510 MtrunA17_Chr4g0023731 55.072 69 31 0 37 105 21 89 1.56e-17 80.9
Msa1275510 MtrunA17_Chr4g0049071 27.442 215 140 5 11 216 25 232 1.83e-17 84.0
Msa1275510 MtrunA17_Chr3g0078681 25.954 262 163 6 35 296 24 254 1.91e-17 83.2
Msa1275510 MtrunA17_Chr3g0132661 29.577 213 134 5 32 236 22 226 2.40e-17 83.6
Msa1275510 MtrunA17_Chr3g0091211 36.441 118 66 4 32 143 7 121 2.48e-17 81.3
Msa1275510 MtrunA17_Chr6g0488401 26.872 227 137 4 36 262 10 207 2.63e-17 83.2
Msa1275510 MtrunA17_Chr6g0486921 26.471 272 160 9 35 301 18 254 2.93e-17 83.6
Msa1275510 MtrunA17_Chr6g0452031 32.692 208 119 7 23 212 3 207 3.55e-17 82.0
Msa1275510 MtrunA17_Chr4g0049121 36.134 119 70 3 34 149 30 145 3.91e-17 83.6
Msa1275510 MtrunA17_Chr3g0139601 36.471 170 94 6 30 195 7 166 4.64e-17 83.2
Msa1275510 MtrunA17_Chr3g0078891 24.933 373 241 10 35 399 10 351 4.67e-17 82.8
Msa1275510 MtrunA17_Chr3g0077781 27.778 252 135 9 35 280 16 226 5.92e-17 82.0
Msa1275510 MtrunA17_Chr3g0087471 33.913 115 75 1 31 145 21 134 6.65e-17 77.0
Msa1275510 MtrunA17_Chr3g0091161 33.553 152 90 5 34 183 13 155 7.90e-17 81.6
Msa1275510 MtrunA17_Chr3g0078731 25.954 262 163 6 35 296 10 240 8.97e-17 81.6
Msa1275510 MtrunA17_Chr6g0457681 27.305 282 144 9 36 301 55 291 9.05e-17 82.0
Msa1275510 MtrunA17_Chr6g0460051 38.679 106 63 2 35 139 51 155 1.30e-16 77.0
Msa1275510 MtrunA17_Chr5g0424761 30.045 223 116 6 35 255 17 201 1.36e-16 80.9
Msa1275510 MtrunA17_Chr7g0221701 32.530 166 96 6 58 216 4 160 1.41e-16 80.1
Msa1275510 MtrunA17_Chr4g0005311 33.571 140 84 3 34 172 24 155 1.55e-16 81.3
Msa1275510 MtrunA17_Chr3g0084251 32.692 156 97 4 18 172 8 156 1.76e-16 81.6
Msa1275510 MtrunA17_Chr3g0078191 33.824 136 81 3 38 172 50 177 1.80e-16 80.9
Msa1275510 MtrunA17_Chr2g0325081 27.491 291 164 8 35 295 13 286 2.61e-16 80.1
Msa1275510 MtrunA17_Chr8g0364381 38.182 110 66 1 35 144 67 174 2.83e-16 80.5
Msa1275510 MtrunA17_Chr5g0419311 31.188 202 114 6 35 225 29 216 3.06e-16 79.3
Msa1275510 MtrunA17_Chr7g0259181 32.738 168 102 5 30 194 22 181 3.09e-16 80.5
Msa1275510 MtrunA17_Chr5g0419301 30.732 205 117 6 35 228 29 219 4.07e-16 80.1
Msa1275510 MtrunA17_Chr3g0086141 33.880 183 100 8 36 206 3 176 7.34e-16 76.3
Msa1275510 MtrunA17_Chr3g0100081 27.431 288 159 12 36 301 25 284 7.83e-16 78.6
Msa1275510 MtrunA17_Chr4g0049131 34.400 125 75 3 35 157 6 125 1.25e-15 73.6
Msa1275510 MtrunA17_Chr6g0460081 26.667 270 156 8 34 301 32 261 2.39e-15 77.4
Msa1275510 MtrunA17_Chr3g0077791 32.258 124 83 1 31 154 12 134 3.05e-15 76.3
Msa1275510 MtrunA17_Chr3g0085951 26.132 287 159 9 35 313 2 243 6.52e-15 76.3
Msa1275510 MtrunA17_Chr7g0236151 31.098 164 104 3 35 195 8 165 8.53e-15 75.1
Msa1275510 MtrunA17_Chr7g0236191 31.098 164 104 3 35 195 8 165 8.53e-15 75.1
Msa1275510 MtrunA17_Chr3g0086041 32.168 143 92 3 32 172 22 161 1.12e-14 75.5
Msa1275510 MtrunA17_Chr7g0236101 31.655 139 89 2 35 173 8 140 1.81e-14 71.2
Msa1275510 MtrunA17_Chr4g0058061 28.421 190 120 6 33 216 155 334 2.46e-14 74.7
Msa1275510 MtrunA17_Chr1g0188701 23.938 259 164 9 35 277 3 244 2.88e-14 72.8
Msa1275510 MtrunA17_Chr1g0166251 29.798 198 124 4 36 230 11 196 3.18e-14 73.9
Msa1275510 MtrunA17_Chr7g0246351 29.148 223 131 8 35 246 5 211 6.38e-14 73.2
Msa1275510 MtrunA17_Chr1g0164901 33.486 218 118 8 36 234 9 218 6.49e-14 72.8
Msa1275510 MtrunA17_Chr7g0227851 29.834 181 122 4 36 212 11 190 9.40e-14 72.4
Msa1275510 MtrunA17_Chr4g0048151 26.754 228 137 7 3 216 2 213 1.01e-13 72.8
Msa1275510 MtrunA17_Chr7g0236211 33.333 141 87 4 35 172 11 147 1.54e-13 71.6
Msa1275510 MtrunA17_Chr7g0273871 31.884 138 88 2 36 172 13 145 1.55e-13 71.6
Msa1275510 MtrunA17_Chr3g0137681 29.108 213 132 6 35 232 9 217 2.87e-13 70.9
Msa1275510 MtrunA17_Chr3g0093361 29.452 146 97 2 30 173 37 178 2.93e-13 70.9
Msa1275510 MtrunA17_Chr4g0027231 31.325 249 122 10 26 227 91 337 3.61e-13 71.2
Msa1275510 MtrunA17_Chr4g0027471 30.986 213 110 6 29 205 3 214 3.80e-13 70.9
Msa1275510 MtrunA17_Chr3g0091171 30.464 151 93 4 36 181 5 148 3.80e-13 70.5
Msa1275510 MtrunA17_Chr4g0011321 29.474 190 93 8 35 216 29 185 3.97e-13 69.7
Msa1275510 MtrunA17_Chr7g0236221 35.345 116 65 3 35 146 8 117 4.43e-13 66.2
Msa1275510 MtrunA17_Chr7g0227821 31.818 110 72 1 36 145 11 117 5.12e-13 68.6
Msa1275510 MtrunA17_Chr4g0049061 35.000 100 65 0 35 134 34 133 5.57e-13 66.6
Msa1275510 MtrunA17_Chr2g0319401 33.735 166 94 5 35 194 26 181 7.23e-13 69.3
Msa1275510 MtrunA17_Chr6g0457621 26.812 276 148 11 34 301 32 261 7.53e-13 69.7
Msa1275510 MtrunA17_Chr4g0027411 30.841 214 111 7 36 212 9 222 7.63e-13 70.1
Msa1275510 MtrunA17_Chr7g0227641 31.193 109 75 0 36 144 11 119 7.92e-13 69.7
Msa1275510 MtrunA17_Chr2g0331741 24.415 299 176 9 34 299 78 359 9.72e-13 69.7
Msa1275510 MtrunA17_Chr2g0319411 32.323 198 109 8 30 214 16 201 9.91e-13 69.3
Msa1275510 MtrunA17_Chr7g0226481 29.193 161 107 4 36 194 11 166 1.35e-12 68.6
Msa1275510 MtrunA17_Chr1g0154471 29.381 194 91 6 29 199 10 180 1.97e-12 68.6
Msa1275510 MtrunA17_Chr3g0138571 29.091 165 110 3 30 194 7 164 2.31e-12 68.2
Msa1275510 MtrunA17_Chr3g0124041 40.278 72 43 0 34 105 10 81 3.59e-12 62.8
Msa1275510 MtrunA17_Chr7g0262091 30.247 162 104 5 36 194 18 173 3.93e-12 67.4
Msa1275510 MtrunA17_Chr4g0076481 28.667 150 94 4 23 172 17 153 4.10e-12 65.9
Msa1275510 MtrunA17_Chr1g0150411 28.311 219 106 7 14 208 4 195 4.24e-12 67.8
Msa1275510 MtrunA17_Chr2g0325431 28.846 208 112 5 14 203 4 193 4.29e-12 67.8
Msa1275510 MtrunA17_Chr7g0274231 25.333 150 109 1 35 181 11 160 4.65e-12 66.2
Msa1275510 MtrunA17_Chr1g0150401 28.205 234 134 6 14 229 4 221 4.72e-12 67.4
Msa1275510 MtrunA17_Chr1g0148651 30.000 220 116 8 36 232 326 530 5.95e-12 67.8
Msa1275510 MtrunA17_Chr1g0148651 30.804 224 115 9 36 255 7 194 2.66e-11 65.5
Msa1275510 MtrunA17_Chr3g0138371 40.278 72 43 0 35 106 19 90 6.28e-12 67.0
Msa1275510 MtrunA17_Chr7g0227771 27.841 176 103 4 35 198 3 166 8.12e-12 64.3
Msa1275510 MtrunA17_Chr8g0385451 29.121 182 115 6 34 209 13 186 1.09e-11 64.7
Msa1275510 MtrunA17_Chr8g0361241 31.159 138 92 2 36 172 12 147 1.24e-11 65.1
Msa1275510 MtrunA17_Chr4g0027441 30.797 276 151 13 34 283 7 268 1.52e-11 65.9
Msa1275510 MtrunA17_Chr4g0041581 28.000 175 101 6 35 198 22 182 1.66e-11 65.9
Msa1275510 MtrunA17_Chr1g0212411 25.430 291 176 10 35 299 31 306 1.84e-11 65.1
Msa1275510 MtrunA17_Chr1g0148661 28.902 173 103 4 36 199 18 179 2.75e-11 63.9
Msa1275510 MtrunA17_Chr1g0212391 30.857 175 93 5 35 194 25 186 2.75e-11 64.3
Msa1275510 MtrunA17_Chr2g0278121 29.412 153 91 5 36 172 16 167 2.84e-11 65.1
Msa1275510 MtrunA17_Chr3g0142561 32.353 102 66 2 23 123 4 103 2.84e-11 60.8
Msa1275510 MtrunA17_Chr3g0084231 40.278 72 43 0 33 104 22 93 3.09e-11 64.7
Msa1275510 MtrunA17_Chr8g0361351 27.570 214 137 7 36 236 12 220 3.67e-11 64.3
Msa1275510 MtrunA17_Chr7g0227621 45.000 60 33 0 36 95 11 70 4.20e-11 59.7
Msa1275510 MtrunA17_Chr1g0148641 29.379 177 110 3 33 199 28 199 4.45e-11 64.3
Msa1275510 MtrunA17_Chr4g0023311 28.033 239 134 9 15 228 10 235 4.94e-11 64.7
Msa1275510 MtrunA17_Chr1g0197671 35.227 176 102 6 34 205 19 186 6.17e-11 62.0
Msa1275510 MtrunA17_Chr2g0303231 29.885 174 99 5 36 194 25 190 6.78e-11 63.9
Msa1275510 MtrunA17_Chr1g0170171 27.350 117 83 2 31 146 20 135 7.08e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275510 AT1G78840.1 26.721 247 161 7 41 286 11 238 3.08e-14 74.7
Msa1275510 AT1G78840.2 26.721 247 161 7 41 286 11 238 3.08e-14 74.7
Msa1275510 AT5G53840.1 34.641 153 84 6 33 180 15 156 4.14e-14 74.3
Msa1275510 AT1G51370.2 29.864 221 131 10 29 241 11 215 1.59e-13 72.0
Msa1275510 AT1G51370.3 29.412 221 132 9 29 241 11 215 1.80e-13 72.0
Msa1275510 AT1G51370.1 29.412 221 132 9 29 241 11 215 2.34e-13 72.0
Msa1275510 AT5G22720.1 30.612 147 95 3 29 172 16 158 2.47e-13 72.0
Msa1275510 AT1G69630.1 28.313 166 113 4 31 194 13 174 1.08e-12 70.1
Msa1275510 AT5G02920.1 34.247 146 82 5 35 178 27 160 1.16e-12 68.2
Msa1275510 AT5G02930.1 33.125 160 92 6 36 191 28 176 1.30e-12 69.7
Msa1275510 AT4G03220.1 29.070 258 138 12 36 278 24 251 3.67e-12 68.6
Msa1275510 AT5G56370.3 30.864 162 106 3 36 196 2 158 3.31e-11 64.7
Msa1275510 AT1G16930.2 29.762 168 102 5 34 195 13 170 4.43e-11 65.1
Msa1275510 AT1G16930.1 29.762 168 102 5 34 195 13 170 4.43e-11 65.1
Msa1275510 AT1G16930.3 29.762 168 102 5 34 195 13 170 4.43e-11 65.1
Msa1275510 AT5G53635.1 30.534 262 129 13 38 280 2 229 4.43e-11 64.7
Msa1275510 AT5G56370.1 30.864 162 106 3 36 196 2 158 4.91e-11 64.7
Msa1275510 AT5G56370.2 30.864 162 106 3 36 196 2 158 4.91e-11 64.7
Msa1275510 AT5G56420.1 28.333 180 90 5 33 194 3 161 7.42e-11 64.3
Msa1275510 AT5G56420.2 28.333 180 90 5 33 194 3 161 7.42e-11 64.3
Msa1275510 AT5G56420.3 28.333 180 90 5 33 194 3 161 7.42e-11 64.3
Msa1275510 AT4G13985.1 29.108 213 118 6 36 232 19 214 9.14e-11 63.9

Find 133 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTTCCTTGATGGGTTT+TGG 0.192361 8_3:-9467029 Msa1275510:five_prime_UTR
TTTCTCTCATGATTCAATTT+TGG 0.194782 8_3:+9462116 None:intergenic
TGAGTTTAGTCTTCCTTCTT+TGG 0.196025 8_3:-9465241 Msa1275510:CDS
CGAAAAGGTGGAGGTATATT+TGG 0.219974 8_3:-9465977 Msa1275510:CDS
TTCTTATTTACTATCGCTTT+GGG 0.227303 8_3:-9465845 Msa1275510:CDS
TGAGATTGTGAATATTTAAA+AGG 0.239480 8_3:-9464759 Msa1275510:intron
TAGCTTTGCCCTATGTTATA+CGG 0.250080 8_3:-9465487 Msa1275510:CDS
AATGTTTGTCTTATAGTAAA+TGG 0.271082 8_3:-9464883 Msa1275510:CDS
TCAATGGATAATTTCTAGTT+TGG 0.273372 8_3:-9466265 Msa1275510:five_prime_UTR
GGGTACTGGATTTCCATTTC+GGG 0.290310 8_3:-9462089 None:intergenic
TGGTGGACAGCCAGAGGTTT+TGG 0.297601 8_3:+9465731 None:intergenic
AGGACTCAAATCTGACTTAA+AGG 0.311937 8_3:+9465398 None:intergenic
AACATAGGGCAAAGCTATTT+AGG 0.315127 8_3:+9465493 None:intergenic
AAGTAATGGGTTGTTGAAAA+AGG 0.320619 8_3:+9467162 None:intergenic
GGGGTACTGGATTTCCATTT+CGG 0.322245 8_3:-9462090 Msa1275510:three_prime_UTR
GAAACCAACTCATATATTAA+TGG 0.324062 8_3:+9466989 None:intergenic
AAGACAAAATATGATGAATA+AGG 0.325111 8_3:+9466039 None:intergenic
TTACTATAAGACAAACATTC+TGG 0.330922 8_3:+9464887 None:intergenic
TTCTGTTTGTTTATGAGGAT+TGG 0.345937 8_3:-9466943 Msa1275510:five_prime_UTR
ACAAACGTCTCTTCTCCTTT+TGG 0.350443 8_3:-9465639 Msa1275510:CDS
TTTGTTACAAATTTCCTTGA+TGG 0.354029 8_3:-9467036 Msa1275510:five_prime_UTR
GTTCTTATTTACTATCGCTT+TGG 0.358076 8_3:-9465846 Msa1275510:CDS
AAAACAAGTTTACAGGAATC+TGG 0.361666 8_3:-9466164 Msa1275510:CDS
TTTGAGGCTCCTTCAATGAT+TGG 0.364907 8_3:+9466851 None:intergenic
TTTGGAGGGTAGTAGTTTGA+TGG 0.365819 8_3:-9466247 Msa1275510:five_prime_UTR
GAGGTTTCTGTTTGTTTATG+AGG 0.369660 8_3:-9466948 Msa1275510:five_prime_UTR
GAGAATTTGGTACCTGACTA+TGG 0.374270 8_3:+9467187 None:intergenic
TTTGTTTATGAGGATTGGTT+TGG 0.379391 8_3:-9466938 Msa1275510:five_prime_UTR
TCATGAATTACACGAACCTT+TGG 0.385218 8_3:-9465199 Msa1275510:CDS
GTGAAGGTTAACCCAACATT+TGG 0.386881 8_3:-9462412 Msa1275510:three_prime_UTR
ACTTCCGATAACACCCGAAA+TGG 0.387108 8_3:+9462076 None:intergenic
GATACTTTGCACAGAAGGTT+TGG 0.387198 8_3:-9462451 Msa1275510:three_prime_UTR
TGGTTTGATCAATATGTTAC+GGG 0.407463 8_3:-9465139 Msa1275510:CDS
TTCAATTTCAGGTTACTTGT+GGG 0.410804 8_3:-9464928 Msa1275510:intron
ACTATGGAAGATGATGATAA+TGG 0.413546 8_3:+9467203 None:intergenic
ATGATAACTTTACTATTCAA+TGG 0.415470 8_3:+9467089 None:intergenic
AATGCCGAAAACAAGTTTAC+AGG 0.418584 8_3:-9466171 Msa1275510:CDS
AATCTCCGGGCCAAAACCTC+TGG 0.418965 8_3:-9465741 Msa1275510:CDS
TTTCAAGAAGTTTGTGTTGT+GGG 0.420527 8_3:-9465901 Msa1275510:CDS
TTTAGTCTTCCTTCTTTGGA+TGG 0.422418 8_3:-9465237 Msa1275510:CDS
TTATCCATTGAATAGCTGAT+TGG 0.425310 8_3:+9466277 None:intergenic
AGTTCGGCTAAACTTGCAAA+TGG 0.436775 8_3:+9465546 None:intergenic
ACTACAATTATTCACACATA+AGG 0.437324 8_3:+9462318 None:intergenic
TTATGAGGATTGGTTTGGAT+TGG 0.439636 8_3:-9466933 Msa1275510:five_prime_UTR
AGGATTGGTTTGGATTGGAT+TGG 0.440729 8_3:-9466928 Msa1275510:five_prime_UTR
CATCATAAGGATCCAAATGT+TGG 0.448727 8_3:+9462400 None:intergenic
TTGTTACAAATTTCCTTGAT+GGG 0.449976 8_3:-9467035 Msa1275510:five_prime_UTR
ATTGCTTGGTATGGTTTGAA+TGG 0.450647 8_3:-9462362 Msa1275510:three_prime_UTR
GGTTTGAATGGGAAATGATT+CGG 0.452133 8_3:-9462350 Msa1275510:three_prime_UTR
ATATGATGAATAAGGCAATC+TGG 0.453620 8_3:+9466047 None:intergenic
AGAGGCAACGGAATTTCAAT+TGG 0.454657 8_3:+9465711 None:intergenic
TATGTTACGGGGACATCATA+AGG 0.455100 8_3:-9465127 Msa1275510:CDS
TTCAGTGTGTGTTGTGAACC+TGG 0.457555 8_3:-9466194 Msa1275510:five_prime_UTR
GAACTTGTGTTCTATCGAAA+AGG 0.461513 8_3:-9465992 Msa1275510:CDS
GCATGTCACCTAGCCTGTCC+TGG 0.463290 8_3:+9466069 None:intergenic
TGCGGAAGTAGGCAGTTATA+TGG 0.463855 8_3:+9464804 None:intergenic
ATTCAATTTCAGGTTACTTG+TGG 0.467186 8_3:-9464929 Msa1275510:intron
ATGGATAATTTCTAGTTTGG+AGG 0.468678 8_3:-9466262 Msa1275510:five_prime_UTR
TTGGAGGGTAGTAGTTTGAT+GGG 0.469511 8_3:-9466246 Msa1275510:five_prime_UTR
TCCAATGATTTGCAACCAAA+AGG 0.472560 8_3:+9465624 None:intergenic
TATCATCATCTTCCATAGTC+AGG 0.473558 8_3:-9467199 Msa1275510:five_prime_UTR
CTGATATAACCAATCATTGA+AGG 0.473751 8_3:-9466860 Msa1275510:five_prime_UTR
TAAGTCAGATTTGAGTCCTA+AGG 0.473916 8_3:-9465394 Msa1275510:CDS
ACAAGGATTATTGCTTGGTA+TGG 0.473997 8_3:-9462371 Msa1275510:three_prime_UTR
GTGTGTTGTTAGATTGTACA+TGG 0.475996 8_3:-9466318 Msa1275510:intron
ATGGTTTGATCAATATGTTA+CGG 0.476561 8_3:-9465140 Msa1275510:CDS
AAAGGAGAAGAGACGTTTGT+AGG 0.478600 8_3:+9465642 None:intergenic
AAATTGACACAATTAGCAAA+TGG 0.484411 8_3:+9465447 None:intergenic
GCAGATATCACAAAATCCTT+AGG 0.486149 8_3:+9465378 None:intergenic
TCCTTGTGTATATCATCATA+AGG 0.489284 8_3:+9462387 None:intergenic
GCATAACATTGAATAATTTG+AGG 0.490252 8_3:+9466835 None:intergenic
AAATGGAAGTCATTGAACTT+TGG 0.491699 8_3:-9464866 Msa1275510:CDS
CTATGGAAGATGATGATAAT+GGG 0.493519 8_3:+9467204 None:intergenic
TTATACGGGAATGGAGCGTC+TGG 0.494898 8_3:-9465472 Msa1275510:CDS
GGCAACGGAATTTCAATTGG+TGG 0.499782 8_3:+9465714 None:intergenic
TGAAGGATACTTTGCACAGA+AGG 0.501350 8_3:-9462456 Msa1275510:three_prime_UTR
TGCCCTATGTTATACGGGAA+TGG 0.502035 8_3:-9465481 Msa1275510:CDS
ATCATAAGGATCCAAATGTT+GGG 0.503049 8_3:+9462401 None:intergenic
AAAAGAGAGGAGACTTTACA+TGG 0.503943 8_3:-9465159 Msa1275510:CDS
AGCTTTGCCCTATGTTATAC+GGG 0.507164 8_3:-9465486 Msa1275510:CDS
TTGCTTGGTATGGTTTGAAT+GGG 0.507874 8_3:-9462361 Msa1275510:three_prime_UTR
GAGAAGAGACGTTTGTAGGT+TGG 0.512178 8_3:+9465646 None:intergenic
CAGCAAATCATTCACTCGGT+TGG 0.512294 8_3:-9465928 Msa1275510:CDS
TATACACAAGGATTATTGCT+TGG 0.513544 8_3:-9462376 Msa1275510:three_prime_UTR
AAGAAATCAGAATTAATCTC+CGG 0.513913 8_3:-9465755 Msa1275510:CDS
TTGTGTTGCGACAGGACACC+AGG 0.527358 8_3:-9466087 Msa1275510:CDS
ATTGAATATGCAGCATTACA+TGG 0.527512 8_3:-9465783 Msa1275510:CDS
AAAAGATCCAAAACCCATCA+AGG 0.531804 8_3:+9467022 None:intergenic
ATGATCAATCCATCCAAAGA+AGG 0.536851 8_3:+9465228 None:intergenic
ACACCTTTGATCGGAAGTGC+CGG 0.540420 8_3:+9466802 None:intergenic
TTGCGACAGGACACCAGGAC+AGG 0.540944 8_3:-9466082 Msa1275510:CDS
CTGAGAACAATTGCGGAAGT+AGG 0.541716 8_3:+9464793 None:intergenic
CTCAAAGAAGGCACAAGGTG+TGG 0.541752 8_3:+9465260 None:intergenic
GCTCCATTCCCGTATAACAT+AGG 0.543154 8_3:+9465478 None:intergenic
CTCCATTCCCGTATAACATA+GGG 0.545398 8_3:+9465479 None:intergenic
TTTGCTGTTGAAGTACAGAC+AGG 0.545777 8_3:+9465944 None:intergenic
TGAACCAATCAGCTATTCAA+TGG 0.553532 8_3:-9466281 Msa1275510:five_prime_UTR
TTCAATTGGTGGACAGCCAG+AGG 0.557133 8_3:+9465725 None:intergenic
CTTATGCATTGCTGAGGTGA+AGG 0.559824 8_3:-9462428 Msa1275510:three_prime_UTR
TGCAAATGGATTTGAAAAGT+CGG 0.561253 8_3:+9465560 None:intergenic
TGGATAATTTCTAGTTTGGA+GGG 0.562228 8_3:-9466261 Msa1275510:five_prime_UTR
AGGAAGACTAAACTCAAAGA+AGG 0.562750 8_3:+9465248 None:intergenic
CTATACCGCAACTGTACAGA+AGG 0.567862 8_3:+9465086 None:intergenic
TCAATTTCAGGTTACTTGTG+GGG 0.572484 8_3:-9464927 Msa1275510:intron
CGGTCGGACACACCTTTGAT+CGG 0.575160 8_3:+9466793 None:intergenic
GCACCGGCACTTCCGATCAA+AGG 0.579976 8_3:-9466805 Msa1275510:intron
ATTTCAAGAAGTTTGTGTTG+TGG 0.581606 8_3:-9465902 Msa1275510:CDS
AGACTCAAGTTACTGAGTTG+CGG 0.587346 8_3:+9465354 None:intergenic
AGAAATCAGAATTAATCTCC+GGG 0.587391 8_3:-9465754 Msa1275510:CDS
ACAGGACACCAGGACAGGCT+AGG 0.588272 8_3:-9466077 Msa1275510:CDS
TTTGAAAAGTCGGCTGCGGT+AGG 0.591591 8_3:+9465570 None:intergenic
ATGTTATGCATCAATAGCAC+CGG 0.594570 8_3:-9466821 Msa1275510:five_prime_UTR
AAGTCATTGAACTTTGGAGT+GGG 0.596146 8_3:-9464860 Msa1275510:CDS
CTTGTGTTCTATCGAAAAGG+TGG 0.601646 8_3:-9465989 Msa1275510:CDS
GTGTTCTATCGAAAAGGTGG+AGG 0.603379 8_3:-9465986 Msa1275510:CDS
GAAGTCATTGAACTTTGGAG+TGG 0.607082 8_3:-9464861 Msa1275510:CDS
ACTATCCTTCTGTACAGTTG+CGG 0.608906 8_3:-9465091 Msa1275510:intron
GTGTATAATTGTGTTGCGAC+AGG 0.610973 8_3:-9466095 Msa1275510:CDS
CTACGATCTTACATCTAAAG+CGG 0.616468 8_3:+9465322 None:intergenic
TGGATTTGAAAAGTCGGCTG+CGG 0.623356 8_3:+9465566 None:intergenic
AATCTGGTTCTGTTATGAAG+AGG 0.633572 8_3:-9466148 Msa1275510:CDS
CTAAACTCAAAGAAGGCACA+AGG 0.634438 8_3:+9465255 None:intergenic
TCAACAGCAAATCATTCACT+CGG 0.634747 8_3:-9465932 Msa1275510:CDS
TGTTGTTAGATTGTACATGG+TGG 0.636802 8_3:-9466315 Msa1275510:intron
GTTTGGCTTATGCATTGCTG+AGG 0.638849 8_3:-9462434 Msa1275510:three_prime_UTR
CTACATGCTGAGAACAATTG+CGG 0.640276 8_3:+9464786 None:intergenic
TCTTATTTACTATCGCTTTG+GGG 0.648748 8_3:-9465844 Msa1275510:CDS
ATCTCATCGAAATAAAAGAG+AGG 0.652681 8_3:-9465172 Msa1275510:CDS
TCCTTATGATGATATACACA+AGG 0.655387 8_3:-9462388 Msa1275510:three_prime_UTR
TAACTGAAATTGAGAAGCTG+TGG 0.665853 8_3:+9465291 None:intergenic
CTTTGGGGTAGATTATGCGA+CGG 0.678356 8_3:-9465829 Msa1275510:CDS
TTGCTGTTGAAGTACAGACA+GGG 0.681711 8_3:+9465945 None:intergenic
GGTTTGATCAATATGTTACG+GGG 0.698782 8_3:-9465138 Msa1275510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTTAATTTTTATTTGT+TGG - chr8_3:9462198-9462217 Msa1275510:intron 10.0%
!!! CCATTTTTTAAAATTATTAT+CGG - chr8_3:9462577-9462596 Msa1275510:intron 10.0%
!!! TTTATTTTATATTCAATTTC+AGG - chr8_3:9464387-9464406 Msa1275510:intron 10.0%
!!! TTTTAAAAAATGGCATAATT+TGG + chr8_3:9462570-9462589 None:intergenic 15.0%
!!! CCGATAATAATTTTAAAAAA+TGG + chr8_3:9462580-9462599 None:intergenic 15.0%
!! ATTTCATATAATTAGGATTT+AGG + chr8_3:9462745-9462764 None:intergenic 15.0%
!! TTGTCAAAAGAAATATAATT+AGG - chr8_3:9464352-9464371 Msa1275510:intron 15.0%
!! ATAAATTATTTAAGGATGAA+CGG + chr8_3:9464605-9464624 None:intergenic 15.0%
!!! ATCATTCTAAAATAACAAAT+TGG - chr8_3:9464717-9464736 Msa1275510:intron 15.0%
!!! TATTGAAGCTATTAATTTTA+GGG - chr8_3:9465127-9465146 Msa1275510:CDS 15.0%
!!! AAAATGTGATTTTATTTTGT+AGG - chr8_3:9465357-9465376 Msa1275510:CDS 15.0%
!!! AAATGTGATTTTATTTTGTA+GGG - chr8_3:9465358-9465377 Msa1275510:CDS 15.0%
!!! TTATGCTAAATTTTGAAAAT+AGG + chr8_3:9466296-9466315 None:intergenic 15.0%
!!! TTAATGTTTTCTATTTTCTT+TGG - chr8_3:9466545-9466564 Msa1275510:intron 15.0%
!! GAAAAAAAAAGAATCAAATA+GGG + chr8_3:9466827-9466846 None:intergenic 15.0%
!! AGAAAAAAAAAGAATCAAAT+AGG + chr8_3:9466828-9466847 None:intergenic 15.0%
!! AGAAGAAGAAAAAAAGTAAT+GGG + chr8_3:9462180-9462199 None:intergenic 20.0%
!! AAGAAGAAGAAAAAAAGTAA+TGG + chr8_3:9462181-9462200 None:intergenic 20.0%
!! ATGATAACTTTACTATTCAA+TGG + chr8_3:9462240-9462259 None:intergenic 20.0%
!!! TTTTCCATTAATATATGAGT+TGG - chr8_3:9462333-9462352 Msa1275510:three_prime_UTR 20.0%
!! ATGAGAATGTATATATACTA+TGG - chr8_3:9462684-9462703 Msa1275510:intron 20.0%
!!! ATACTATGGTTCTTTTTATA+AGG - chr8_3:9462698-9462717 Msa1275510:intron 20.0%
!! GATCACTATTTCATATAATT+AGG + chr8_3:9462752-9462771 None:intergenic 20.0%
!! GCAATTACTAAACTTAAAAA+TGG + chr8_3:9462774-9462793 None:intergenic 20.0%
!! TTTAATAGTGTATGTACTAT+TGG - chr8_3:9462855-9462874 Msa1275510:intron 20.0%
!! TTTCTTATATATAGAATCGA+AGG - chr8_3:9462960-9462979 Msa1275510:intron 20.0%
!! AAGACAAAATATGATGAATA+AGG + chr8_3:9463290-9463309 None:intergenic 20.0%
!!! TCATCATATTTTGTCTTTTA+TGG - chr8_3:9463293-9463312 Msa1275510:intron 20.0%
!! CAAAAGAAATATAATTAGGA+TGG - chr8_3:9464356-9464375 Msa1275510:intron 20.0%
!! AATGTTTGTCTTATAGTAAA+TGG - chr8_3:9464443-9464462 Msa1275510:intron 20.0%
!! TGAGATTGTGAATATTTAAA+AGG - chr8_3:9464567-9464586 Msa1275510:intron 20.0%
!! TAAATTATTTAAGGATGAAC+GGG + chr8_3:9464604-9464623 None:intergenic 20.0%
!! AAGGGAGAATAAATTATTTA+AGG + chr8_3:9464613-9464632 None:intergenic 20.0%
!!! TAGAAATTTTAACCAATCAT+TGG + chr8_3:9464744-9464763 None:intergenic 20.0%
!! TGGTTAAAATTTCTAATTAG+TGG - chr8_3:9464749-9464768 Msa1275510:intron 20.0%
!!! AAACTTTTCAAAAATATGTG+TGG - chr8_3:9464904-9464923 Msa1275510:CDS 20.0%
!!! AACTTTTCAAAAATATGTGT+GGG - chr8_3:9464905-9464924 Msa1275510:CDS 20.0%
!!! CTTATTGAGAGTATTAAAAA+GGG - chr8_3:9464933-9464952 Msa1275510:intron 20.0%
!!! GTATTGAAGCTATTAATTTT+AGG - chr8_3:9465126-9465145 Msa1275510:CDS 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr8_3:9465389-9465408 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr8_3:9465388-9465407 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr8_3:9465201-9465220 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr8_3:9465202-9465221 None:intergenic 20.0%
!!! AATAATTTCATCAACAGTTT+TGG + chr8_3:9465262-9465281 None:intergenic 20.0%
!!! GTTGATGAAATTATTTTACA+CGG - chr8_3:9465267-9465286 Msa1275510:CDS 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - chr8_3:9465388-9465407 Msa1275510:CDS 20.0%
!! CAAAACTGTGAATATTTATA+GGG - chr8_3:9465389-9465408 Msa1275510:CDS 20.0%
!! AATCACTTCGATAAAATTAA+GGG + chr8_3:9465432-9465451 None:intergenic 20.0%
!!! ATTCTTTCCTAAACTATTTT+GGG + chr8_3:9466060-9466079 None:intergenic 20.0%
!! AATAATCAATTATACCCTTA+GGG + chr8_3:9466189-9466208 None:intergenic 20.0%
!! AAATAATCAATTATACCCTT+AGG + chr8_3:9466190-9466209 None:intergenic 20.0%
!!! TAAGGGTATAATTGATTATT+TGG - chr8_3:9466189-9466208 Msa1275510:exon 20.0%
!!! ACTTTTATGAAAAAACTGTT+TGG - chr8_3:9466408-9466427 Msa1275510:intron 20.0%
!!! TTCTACATTTAACATTTTCT+TGG - chr8_3:9466751-9466770 Msa1275510:intron 20.0%
!!! TCTACATTTAACATTTTCTT+GGG - chr8_3:9466752-9466771 Msa1275510:intron 20.0%
!!! GTTTTTGTATTAGATTTTGA+AGG - chr8_3:9466853-9466872 Msa1275510:five_prime_UTR 20.0%
!!! TTTCTTTTTAAACTGAGAAA+TGG + chr8_3:9467114-9467133 None:intergenic 20.0%
!!! TCTTGTTATTTTGCTATTTA+GGG + chr8_3:9467172-9467191 None:intergenic 20.0%
!!! TTCTTGTTATTTTGCTATTT+AGG + chr8_3:9467173-9467192 None:intergenic 20.0%
! TTTGTTACAAATTTCCTTGA+TGG - chr8_3:9462290-9462309 Msa1275510:three_prime_UTR 25.0%
! TTGTTACAAATTTCCTTGAT+GGG - chr8_3:9462291-9462310 Msa1275510:three_prime_UTR 25.0%
! GAAACCAACTCATATATTAA+TGG + chr8_3:9462340-9462359 None:intergenic 25.0%
!!! CTTTGTTTCAATTTTCTTTG+AGG - chr8_3:9462359-9462378 Msa1275510:three_prime_UTR 25.0%
! GCATAACATTGAATAATTTG+AGG + chr8_3:9462494-9462513 None:intergenic 25.0%
! TATCAAGATGAGTAATTAAC+CGG + chr8_3:9462635-9462654 None:intergenic 25.0%
!! AGGAATAGTTAATGTGTTTT+AGG - chr8_3:9462718-9462737 Msa1275510:intron 25.0%
! TCTAACAACACACAAAAAAA+CGG + chr8_3:9463001-9463020 None:intergenic 25.0%
!!! TCAATGGATAATTTCTAGTT+TGG - chr8_3:9463061-9463080 Msa1275510:intron 25.0%
!! TTCTTATTTACTATCGCTTT+GGG - chr8_3:9463481-9463500 Msa1275510:intron 25.0%
! AAGAAATCAGAATTAATCTC+CGG - chr8_3:9463571-9463590 Msa1275510:intron 25.0%
! TGTTGTAAAACCAAAAAGTT+CGG + chr8_3:9463799-9463818 None:intergenic 25.0%
! AAATTGACACAATTAGCAAA+TGG + chr8_3:9463882-9463901 None:intergenic 25.0%
! ATGGTTTGATCAATATGTTA+CGG - chr8_3:9464186-9464205 Msa1275510:intron 25.0%
! TTACTATAAGACAAACATTC+TGG + chr8_3:9464442-9464461 None:intergenic 25.0%
! TTCATACTTATGGTCATAAA+GGG + chr8_3:9464631-9464650 None:intergenic 25.0%
! ATTCATACTTATGGTCATAA+AGG + chr8_3:9464632-9464651 None:intergenic 25.0%
!! TGACCATAAGTATGAATTTT+TGG - chr8_3:9464635-9464654 Msa1275510:intron 25.0%
! GTTCCAAAAATTCATACTTA+TGG + chr8_3:9464641-9464660 None:intergenic 25.0%
!! TTTTTCCAACATGAGAATTT+TGG - chr8_3:9464843-9464862 Msa1275510:CDS 25.0%
!!! GCTTATTGAGAGTATTAAAA+AGG - chr8_3:9464932-9464951 Msa1275510:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr8_3:9465234-9465253 Msa1275510:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr8_3:9465235-9465254 Msa1275510:CDS 25.0%
! CGCTGATGAAAAAATTTATA+GGG - chr8_3:9465298-9465317 Msa1275510:CDS 25.0%
!! ATGCTGATGGAAAATTTTAT+AGG - chr8_3:9465328-9465347 Msa1275510:CDS 25.0%
!! TGCTGATGGAAAATTTTATA+GGG - chr8_3:9465329-9465348 Msa1275510:CDS 25.0%
! CAATCACTTCGATAAAATTA+AGG + chr8_3:9465433-9465452 None:intergenic 25.0%
! AGTAGAGATAGAAAATGTAT+AGG - chr8_3:9465550-9465569 Msa1275510:CDS 25.0%
!!! GTATTGGTTTTTACAAGTTA+AGG + chr8_3:9465859-9465878 None:intergenic 25.0%
!! TAACTTGTAAAAACCAATAC+AGG - chr8_3:9465859-9465878 Msa1275510:CDS 25.0%
!! AATTCATTCTTTTCCTGTAT+TGG + chr8_3:9465875-9465894 None:intergenic 25.0%
!!! TTGAGCTATTTCAATTTTCA+TGG + chr8_3:9465930-9465949 None:intergenic 25.0%
!! GATTCTTTCCTAAACTATTT+TGG + chr8_3:9466061-9466080 None:intergenic 25.0%
! TCATATTTCACTGTATAATC+AGG - chr8_3:9466103-9466122 Msa1275510:CDS 25.0%
! TAGAACAGAATAACCAATTA+TGG - chr8_3:9466237-9466256 Msa1275510:five_prime_UTR 25.0%
! AGAACAGAATAACCAATTAT+GGG - chr8_3:9466238-9466257 Msa1275510:five_prime_UTR 25.0%
!! TAATTTAAAATTTGAGTCGC+AGG + chr8_3:9466520-9466539 None:intergenic 25.0%
! CTTAATGATCTGTAAAACAA+TGG + chr8_3:9466605-9466624 None:intergenic 25.0%
! GTATAATTATTTACATCCAC+AGG + chr8_3:9466654-9466673 None:intergenic 25.0%
! ACTACAATTATTCACACATA+AGG + chr8_3:9467011-9467030 None:intergenic 25.0%
!!! GTATTTTGACTGTAATTTTG+TGG - chr8_3:9467088-9467107 Msa1275510:five_prime_UTR 25.0%
!! TTTCTCTCATGATTCAATTT+TGG + chr8_3:9467213-9467232 None:intergenic 25.0%
! ATTGAATCATGAGAGAAAAA+CGG - chr8_3:9467215-9467234 Msa1275510:five_prime_UTR 25.0%
CTATGGAAGATGATGATAAT+GGG + chr8_3:9462125-9462144 None:intergenic 30.0%
ACTATGGAAGATGATGATAA+TGG + chr8_3:9462126-9462145 None:intergenic 30.0%
GTTGAAAAAGGAAGAGAATT+TGG + chr8_3:9462155-9462174 None:intergenic 30.0%
!! AAGTAATGGGTTGTTGAAAA+AGG + chr8_3:9462167-9462186 None:intergenic 30.0%
TTCTGTTTGTTTATGAGGAT+TGG - chr8_3:9462383-9462402 Msa1275510:three_prime_UTR 30.0%
!! TTTGTTTATGAGGATTGGTT+TGG - chr8_3:9462388-9462407 Msa1275510:three_prime_UTR 30.0%
CTGATATAACCAATCATTGA+AGG - chr8_3:9462466-9462485 Msa1275510:intron 30.0%
! ATAATTTGGTGACATGTCAT+CGG + chr8_3:9462556-9462575 None:intergenic 30.0%
TCATAAGAAAACTTAGCAAC+AGG + chr8_3:9462668-9462687 None:intergenic 30.0%
GTATGTACTATTGGTATTTC+TGG - chr8_3:9462864-9462883 Msa1275510:intron 30.0%
TTAACACTTTCCATTGATCT+TGG - chr8_3:9462893-9462912 Msa1275510:intron 30.0%
TTTGATATGACCAAGATCAA+TGG + chr8_3:9462906-9462925 None:intergenic 30.0%
! CAAATGCTTTTCATTTGTCT+TGG - chr8_3:9462922-9462941 Msa1275510:intron 30.0%
TTATCCATTGAATAGCTGAT+TGG + chr8_3:9463052-9463071 None:intergenic 30.0%
!! ATGGATAATTTCTAGTTTGG+AGG - chr8_3:9463064-9463083 Msa1275510:intron 30.0%
!! TGGATAATTTCTAGTTTGGA+GGG - chr8_3:9463065-9463084 Msa1275510:intron 30.0%
!! GATTCCTGTAAACTTGTTTT+CGG + chr8_3:9463162-9463181 None:intergenic 30.0%
AAAACAAGTTTACAGGAATC+TGG - chr8_3:9463162-9463181 Msa1275510:intron 30.0%
ATATGATGAATAAGGCAATC+TGG + chr8_3:9463282-9463301 None:intergenic 30.0%
ATTTCAAGAAGTTTGTGTTG+TGG - chr8_3:9463424-9463443 Msa1275510:intron 30.0%
TTTCAAGAAGTTTGTGTTGT+GGG - chr8_3:9463425-9463444 Msa1275510:intron 30.0%
! GTTCTTATTTACTATCGCTT+TGG - chr8_3:9463480-9463499 Msa1275510:intron 30.0%
! TCTTATTTACTATCGCTTTG+GGG - chr8_3:9463482-9463501 Msa1275510:intron 30.0%
! GGATCAGTATCTTTTGAATA+AGG - chr8_3:9463518-9463537 Msa1275510:intron 30.0%
ATTGAATATGCAGCATTACA+TGG - chr8_3:9463543-9463562 Msa1275510:intron 30.0%
AGAAATCAGAATTAATCTCC+GGG - chr8_3:9463572-9463591 Msa1275510:intron 30.0%
!! TTTTAACTCGAGTCTTTTCA+AGG + chr8_3:9463655-9463674 None:intergenic 30.0%
! TGCAAATGGATTTGAAAAGT+CGG + chr8_3:9463769-9463788 None:intergenic 30.0%
! TTTCGATGAGATTTTTCCAA+AGG + chr8_3:9464146-9464165 None:intergenic 30.0%
ATCTCATCGAAATAAAAGAG+AGG - chr8_3:9464154-9464173 Msa1275510:intron 30.0%
TGGTTTGATCAATATGTTAC+GGG - chr8_3:9464187-9464206 Msa1275510:intron 30.0%
!! ATTCAATTTCAGGTTACTTG+TGG - chr8_3:9464397-9464416 Msa1275510:intron 30.0%
!! TTCAATTTCAGGTTACTTGT+GGG - chr8_3:9464398-9464417 Msa1275510:intron 30.0%
AAATGGAAGTCATTGAACTT+TGG - chr8_3:9464460-9464479 Msa1275510:intron 30.0%
TAACAAATTGGTCCAATGAT+TGG - chr8_3:9464729-9464748 Msa1275510:intron 30.0%
AACATCCAAAATTCTCATGT+TGG + chr8_3:9464851-9464870 None:intergenic 30.0%
! AATTTTGGATGTTACCCAAT+AGG - chr8_3:9464858-9464877 Msa1275510:CDS 30.0%
TTCAAAAATATGTGTGGGAT+AGG - chr8_3:9464910-9464929 Msa1275510:CDS 30.0%
TTCAATACTCTCAATAAGGA+GGG + chr8_3:9465114-9465133 None:intergenic 30.0%
TAGCTTCAATACTCTCAATA+AGG + chr8_3:9465118-9465137 None:intergenic 30.0%
! GCGCTGATGAAAAAATTTAT+AGG - chr8_3:9465297-9465316 Msa1275510:CDS 30.0%
TTGAATTTAACCACATGTGT+CGG - chr8_3:9465733-9465752 Msa1275510:CDS 30.0%
TAGCTCAATATGTACTAAGA+AGG - chr8_3:9465942-9465961 Msa1275510:CDS 30.0%
AGAACAAACAATGAAAACAC+AGG + chr8_3:9466001-9466020 None:intergenic 30.0%
!!! AGTTTTAGAAACCCTAGATT+AGG - chr8_3:9466022-9466041 Msa1275510:CDS 30.0%
GTGTGTATATACCTAATCTA+GGG + chr8_3:9466036-9466055 None:intergenic 30.0%
TGTGTGTATATACCTAATCT+AGG + chr8_3:9466037-9466056 None:intergenic 30.0%
GTTTAGGAAAGAATCAAGTA+TGG - chr8_3:9466066-9466085 Msa1275510:CDS 30.0%
!! TATTTGGTTCTTCTGAAATC+TGG - chr8_3:9466205-9466224 Msa1275510:five_prime_UTR 30.0%
AATAACCAATTATGGGAGTA+TGG - chr8_3:9466245-9466264 Msa1275510:five_prime_UTR 30.0%
TAGCATAAAATAATCGATCC+TGG - chr8_3:9466308-9466327 Msa1275510:five_prime_UTR 30.0%
TTGATCAATTACTTAAGTCC+AGG + chr8_3:9466329-9466348 None:intergenic 30.0%
GATCTGTAAAACAATGGATA+AGG + chr8_3:9466599-9466618 None:intergenic 30.0%
! AGTCACCATGATAACATTTT+TGG - chr8_3:9466702-9466721 Msa1275510:intron 30.0%
! GTCACCATGATAACATTTTT+GGG - chr8_3:9466703-9466722 Msa1275510:intron 30.0%
ATCATAAGGATCCAAATGTT+GGG + chr8_3:9466928-9466947 None:intergenic 30.0%
TCCTTATGATGATATACACA+AGG - chr8_3:9466938-9466957 Msa1275510:five_prime_UTR 30.0%
TCCTTGTGTATATCATCATA+AGG + chr8_3:9466942-9466961 None:intergenic 30.0%
TATACACAAGGATTATTGCT+TGG - chr8_3:9466950-9466969 Msa1275510:five_prime_UTR 30.0%
TTGAATCATGAGAGAAAAAC+GGG - chr8_3:9467216-9467235 Msa1275510:five_prime_UTR 30.0%
TATCATCATCTTCCATAGTC+AGG - chr8_3:9462127-9462146 Msa1275510:three_prime_UTR 35.0%
!!! CAAATTTCCTTGATGGGTTT+TGG - chr8_3:9462297-9462316 Msa1275510:three_prime_UTR 35.0%
AAAAGATCCAAAACCCATCA+AGG + chr8_3:9462307-9462326 None:intergenic 35.0%
GAGGTTTCTGTTTGTTTATG+AGG - chr8_3:9462378-9462397 Msa1275510:three_prime_UTR 35.0%
!! TTATGAGGATTGGTTTGGAT+TGG - chr8_3:9462393-9462412 Msa1275510:three_prime_UTR 35.0%
ATGTTATGCATCAATAGCAC+CGG - chr8_3:9462505-9462524 Msa1275510:intron 35.0%
! GTGTGTTGTTAGATTGTACA+TGG - chr8_3:9463008-9463027 Msa1275510:intron 35.0%
TGTTGTTAGATTGTACATGG+TGG - chr8_3:9463011-9463030 Msa1275510:intron 35.0%
TGAACCAATCAGCTATTCAA+TGG - chr8_3:9463045-9463064 Msa1275510:intron 35.0%
AATGCCGAAAACAAGTTTAC+AGG - chr8_3:9463155-9463174 Msa1275510:intron 35.0%
!! AATCTGGTTCTGTTATGAAG+AGG - chr8_3:9463178-9463197 Msa1275510:intron 35.0%
GAACTTGTGTTCTATCGAAA+AGG - chr8_3:9463334-9463353 Msa1275510:intron 35.0%
TCAACAGCAAATCATTCACT+CGG - chr8_3:9463394-9463413 Msa1275510:intron 35.0%
!! TCCTTTTGGTTGCAAATCAT+TGG - chr8_3:9463701-9463720 Msa1275510:intron 35.0%
! TCCAATGATTTGCAACCAAA+AGG + chr8_3:9463705-9463724 None:intergenic 35.0%
GAAACATTGAAAAATGCTCG+AGG + chr8_3:9463737-9463756 None:intergenic 35.0%
AACATAGGGCAAAGCTATTT+AGG + chr8_3:9463836-9463855 None:intergenic 35.0%
! TAGCTTTGCCCTATGTTATA+CGG - chr8_3:9463839-9463858 Msa1275510:intron 35.0%
AGGACTCAAATCTGACTTAA+AGG + chr8_3:9463931-9463950 None:intergenic 35.0%
TAAGTCAGATTTGAGTCCTA+AGG - chr8_3:9463932-9463951 Msa1275510:intron 35.0%
GCAGATATCACAAAATCCTT+AGG + chr8_3:9463951-9463970 None:intergenic 35.0%
CTACGATCTTACATCTAAAG+CGG + chr8_3:9464007-9464026 None:intergenic 35.0%
TAACTGAAATTGAGAAGCTG+TGG + chr8_3:9464038-9464057 None:intergenic 35.0%
AGGAAGACTAAACTCAAAGA+AGG + chr8_3:9464081-9464100 None:intergenic 35.0%
! TGAGTTTAGTCTTCCTTCTT+TGG - chr8_3:9464085-9464104 Msa1275510:intron 35.0%
! TTTAGTCTTCCTTCTTTGGA+TGG - chr8_3:9464089-9464108 Msa1275510:intron 35.0%
ATGATCAATCCATCCAAAGA+AGG + chr8_3:9464101-9464120 None:intergenic 35.0%
TCATGAATTACACGAACCTT+TGG - chr8_3:9464127-9464146 Msa1275510:intron 35.0%
AAAAGAGAGGAGACTTTACA+TGG - chr8_3:9464167-9464186 Msa1275510:intron 35.0%
GGTTTGATCAATATGTTACG+GGG - chr8_3:9464188-9464207 Msa1275510:intron 35.0%
!! TCAATTTCAGGTTACTTGTG+GGG - chr8_3:9464399-9464418 Msa1275510:intron 35.0%
!!! CAAACATTCTGGCTTTTCTA+AGG + chr8_3:9464431-9464450 None:intergenic 35.0%
!! AAGTCATTGAACTTTGGAGT+GGG - chr8_3:9464466-9464485 Msa1275510:intron 35.0%
GAGTATTAAAAAGGGAAACC+TGG - chr8_3:9464941-9464960 Msa1275510:intron 35.0%
TGCGTACAATACACCAAAAA+TGG + chr8_3:9465013-9465032 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr8_3:9465037-9465056 None:intergenic 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr8_3:9465037-9465056 Msa1275510:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr8_3:9465042-9465061 None:intergenic 35.0%
TCAATACTCTCAATAAGGAG+GGG + chr8_3:9465113-9465132 None:intergenic 35.0%
CTTCAATACTCTCAATAAGG+AGG + chr8_3:9465115-9465134 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+GGG + chr8_3:9465230-9465249 None:intergenic 35.0%
ATGCTTAAGGAAAATGTCAC+AGG + chr8_3:9465231-9465250 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr8_3:9465244-9465263 None:intergenic 35.0%
ATAGGGACTAAAAATGCTGA+TGG - chr8_3:9465315-9465334 Msa1275510:CDS 35.0%
! TAACCTATACATCTTGCTGT+GGG + chr8_3:9465495-9465514 None:intergenic 35.0%
ATAACCTATACATCTTGCTG+TGG + chr8_3:9465496-9465515 None:intergenic 35.0%
ATAAGGTGAGACATTGCTAT+GGG + chr8_3:9465608-9465627 None:intergenic 35.0%
TATAAGGTGAGACATTGCTA+TGG + chr8_3:9465609-9465628 None:intergenic 35.0%
TCTCACCTTATACAAGACTA+AGG - chr8_3:9465617-9465636 Msa1275510:CDS 35.0%
CTCACCTTATACAAGACTAA+GGG - chr8_3:9465618-9465637 Msa1275510:CDS 35.0%
!! GTATCCCTTAGTCTTGTATA+AGG + chr8_3:9465625-9465644 None:intergenic 35.0%
ATTATAATCAGTGTCGTGTC+CGG + chr8_3:9465699-9465718 None:intergenic 35.0%
GCACTAACACTTCAATTTGA+AGG + chr8_3:9465796-9465815 None:intergenic 35.0%
! TGAAGTGTTAGTGCAACTTA+AGG - chr8_3:9465802-9465821 Msa1275510:CDS 35.0%
! GAAGTGTTAGTGCAACTTAA+GGG - chr8_3:9465803-9465822 Msa1275510:CDS 35.0%
ACACACACCCAAAATAGTTT+AGG - chr8_3:9466050-9466069 Msa1275510:CDS 35.0%
AATGACCATACTCCCATAAT+TGG + chr8_3:9466253-9466272 None:intergenic 35.0%
!!! TTCTATTTTCTTTGGAGCAG+TGG - chr8_3:9466553-9466572 Msa1275510:intron 35.0%
TCGACCCAAAAATGTTATCA+TGG + chr8_3:9466710-9466729 None:intergenic 35.0%
CATCATAAGGATCCAAATGT+TGG + chr8_3:9466929-9466948 None:intergenic 35.0%
ACAAGGATTATTGCTTGGTA+TGG - chr8_3:9466955-9466974 Msa1275510:five_prime_UTR 35.0%
ATTGCTTGGTATGGTTTGAA+TGG - chr8_3:9466964-9466983 Msa1275510:five_prime_UTR 35.0%
TTGCTTGGTATGGTTTGAAT+GGG - chr8_3:9466965-9466984 Msa1275510:five_prime_UTR 35.0%
GGTTTGAATGGGAAATGATT+CGG - chr8_3:9466976-9466995 Msa1275510:five_prime_UTR 35.0%
TGAATCATGAGAGAAAAACG+GGG - chr8_3:9467217-9467236 Msa1275510:five_prime_UTR 35.0%
GAGAATTTGGTACCTGACTA+TGG + chr8_3:9462142-9462161 None:intergenic 40.0%
!! AGGATTGGTTTGGATTGGAT+TGG - chr8_3:9462398-9462417 Msa1275510:three_prime_UTR 40.0%
! TTTGAGGCTCCTTCAATGAT+TGG + chr8_3:9462478-9462497 None:intergenic 40.0%
CAAGATGAGTAATTAACCGG+TGG + chr8_3:9462632-9462651 None:intergenic 40.0%
GAAAACTTAGCAACAGGAAG+TGG + chr8_3:9462662-9462681 None:intergenic 40.0%
TTTGGAGGGTAGTAGTTTGA+TGG - chr8_3:9463079-9463098 Msa1275510:intron 40.0%
TTGGAGGGTAGTAGTTTGAT+GGG - chr8_3:9463080-9463099 Msa1275510:intron 40.0%
!! AAACTTGTTTTCGGCATTCC+AGG + chr8_3:9463153-9463172 None:intergenic 40.0%
GTGTATAATTGTGTTGCGAC+AGG - chr8_3:9463231-9463250 Msa1275510:intron 40.0%
CTTGTGTTCTATCGAAAAGG+TGG - chr8_3:9463337-9463356 Msa1275510:intron 40.0%
! CGAAAAGGTGGAGGTATATT+TGG - chr8_3:9463349-9463368 Msa1275510:intron 40.0%
! TTGCTGTTGAAGTACAGACA+GGG + chr8_3:9463384-9463403 None:intergenic 40.0%
!! TTTGCTGTTGAAGTACAGAC+AGG + chr8_3:9463385-9463404 None:intergenic 40.0%
AGAGGCAACGGAATTTCAAT+TGG + chr8_3:9463618-9463637 None:intergenic 40.0%
TGGCAAGTAAAAAGAGGCAA+CGG + chr8_3:9463630-9463649 None:intergenic 40.0%
! AAGGACTGGCAAGTAAAAAG+AGG + chr8_3:9463636-9463655 None:intergenic 40.0%
AAAGGAGAAGAGACGTTTGT+AGG + chr8_3:9463687-9463706 None:intergenic 40.0%
! ACAAACGTCTCTTCTCCTTT+TGG - chr8_3:9463687-9463706 Msa1275510:intron 40.0%
AGTTCGGCTAAACTTGCAAA+TGG + chr8_3:9463783-9463802 None:intergenic 40.0%
! GCAAGTTTAGCCGAACTTTT+TGG - chr8_3:9463786-9463805 Msa1275510:intron 40.0%
AGCTTTGCCCTATGTTATAC+GGG - chr8_3:9463840-9463859 Msa1275510:intron 40.0%
CTCCATTCCCGTATAACATA+GGG + chr8_3:9463850-9463869 None:intergenic 40.0%
AGACTCAAGTTACTGAGTTG+CGG + chr8_3:9463975-9463994 None:intergenic 40.0%
! CTAAACTCAAAGAAGGCACA+AGG + chr8_3:9464074-9464093 None:intergenic 40.0%
TATGTTACGGGGACATCATA+AGG - chr8_3:9464199-9464218 Msa1275510:intron 40.0%
ACTATCCTTCTGTACAGTTG+CGG - chr8_3:9464235-9464254 Msa1275510:intron 40.0%
! GAAGTCATTGAACTTTGGAG+TGG - chr8_3:9464465-9464484 Msa1275510:intron 40.0%
CTACATGCTGAGAACAATTG+CGG + chr8_3:9464543-9464562 None:intergenic 40.0%
!! ACCTGACTTTGAAGCCTATT+GGG + chr8_3:9464875-9464894 None:intergenic 40.0%
!! AACCTGACTTTGAAGCCTAT+TGG + chr8_3:9464876-9464895 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr8_3:9465043-9465062 None:intergenic 40.0%
AGTTGTTGTCATTCAACTCC+TGG + chr8_3:9465069-9465088 None:intergenic 40.0%
ATACCCACAGCAAGATGTAT+AGG - chr8_3:9465489-9465508 Msa1275510:CDS 40.0%
TGCTATGGGGTGAATATTTC+AGG + chr8_3:9465594-9465613 None:intergenic 40.0%
TAAGGTGAGACATTGCTATG+GGG + chr8_3:9465607-9465626 None:intergenic 40.0%
TCAACCTTTCCCAACAGATA+GGG - chr8_3:9465646-9465665 Msa1275510:CDS 40.0%
! ATAGGGTATCCCTATCTGTT+GGG + chr8_3:9465658-9465677 None:intergenic 40.0%
TACCCTATGAAGCACAAACA+TGG - chr8_3:9465670-9465689 Msa1275510:CDS 40.0%
GTCCATGTTTGTGCTTCATA+GGG + chr8_3:9465675-9465694 None:intergenic 40.0%
TGTCCATGTTTGTGCTTCAT+AGG + chr8_3:9465676-9465695 None:intergenic 40.0%
! TTAGACACTGACACGTGTTT+TGG - chr8_3:9465758-9465777 Msa1275510:CDS 40.0%
CTCACCAGATGCTTAACTAA+GGG - chr8_3:9465830-9465849 Msa1275510:CDS 40.0%
GTAACCCTTAGTTAAGCATC+TGG + chr8_3:9465837-9465856 None:intergenic 40.0%
TTGACAATCGACTACCCTAA+GGG - chr8_3:9466172-9466191 Msa1275510:CDS 40.0%
!! TTGAGTCGCAGGTATTTTGA+GGG + chr8_3:9466509-9466528 None:intergenic 40.0%
! TTTGAGTCGCAGGTATTTTG+AGG + chr8_3:9466510-9466529 None:intergenic 40.0%
GAGCAGTGGTGATTAGTATT+TGG - chr8_3:9466567-9466586 Msa1275510:intron 40.0%
TGAAGGATACTTTGCACAGA+AGG - chr8_3:9466870-9466889 Msa1275510:five_prime_UTR 40.0%
GATACTTTGCACAGAAGGTT+TGG - chr8_3:9466875-9466894 Msa1275510:five_prime_UTR 40.0%
GTGAAGGTTAACCCAACATT+TGG - chr8_3:9466914-9466933 Msa1275510:five_prime_UTR 40.0%
! TTTGGTGACATGTCATCGGT+CGG + chr8_3:9462552-9462571 None:intergenic 45.0%
AACCGGTGGTTTATGAAGCA+CGG + chr8_3:9462618-9462637 None:intergenic 45.0%
TTCAGTGTGTGTTGTGAACC+TGG - chr8_3:9463132-9463151 Msa1275510:intron 45.0%
GTGTTCTATCGAAAAGGTGG+AGG - chr8_3:9463340-9463359 Msa1275510:intron 45.0%
CAGCAAATCATTCACTCGGT+TGG - chr8_3:9463398-9463417 Msa1275510:intron 45.0%
!! CTTTGGGGTAGATTATGCGA+CGG - chr8_3:9463497-9463516 Msa1275510:intron 45.0%
GGCAACGGAATTTCAATTGG+TGG + chr8_3:9463615-9463634 None:intergenic 45.0%
!! ACTCGAGTCTTTTCAAGGAC+TGG + chr8_3:9463650-9463669 None:intergenic 45.0%
GAGAAGAGACGTTTGTAGGT+TGG + chr8_3:9463683-9463702 None:intergenic 45.0%
TGGATTTGAAAAGTCGGCTG+CGG + chr8_3:9463763-9463782 None:intergenic 45.0%
TGCCCTATGTTATACGGGAA+TGG - chr8_3:9463845-9463864 Msa1275510:intron 45.0%
GCTCCATTCCCGTATAACAT+AGG + chr8_3:9463851-9463870 None:intergenic 45.0%
CTATACCGCAACTGTACAGA+AGG + chr8_3:9464243-9464262 None:intergenic 45.0%
TGCGGAAGTAGGCAGTTATA+TGG + chr8_3:9464525-9464544 None:intergenic 45.0%
CTGAGAACAATTGCGGAAGT+AGG + chr8_3:9464536-9464555 None:intergenic 45.0%
ACCCAATAGGCTTCAAAGTC+AGG - chr8_3:9464871-9464890 Msa1275510:CDS 45.0%
TAAAAAGCTCCTGCATACGC+AGG - chr8_3:9464969-9464988 Msa1275510:intron 45.0%
AAAAAGCTCCTGCATACGCA+GGG - chr8_3:9464970-9464989 Msa1275510:intron 45.0%
AAAATGGTGAGACCCCTTCT+CGG + chr8_3:9464997-9465016 None:intergenic 45.0%
! AGAAGGGGTCTCACCATTTT+TGG - chr8_3:9464997-9465016 Msa1275510:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_3:9465048-9465067 Msa1275510:intron 45.0%
TCAATAAGGAGGGGTAACCT+TGG + chr8_3:9465104-9465123 None:intergenic 45.0%
GGGGTGAATATTTCAGGAAG+AGG + chr8_3:9465588-9465607 None:intergenic 45.0%
CTATCTGTTGGGAAAGGTTG+AGG + chr8_3:9465647-9465666 None:intergenic 45.0%
CTCAACCTTTCCCAACAGAT+AGG - chr8_3:9465645-9465664 Msa1275510:CDS 45.0%
GTATCCCTATCTGTTGGGAA+AGG + chr8_3:9465653-9465672 None:intergenic 45.0%
! CATAGGGTATCCCTATCTGT+TGG + chr8_3:9465659-9465678 None:intergenic 45.0%
TGAAGCACAAACATGGACAC+CGG - chr8_3:9465677-9465696 Msa1275510:CDS 45.0%
CCTTAGTTAAGCATCTGGTG+AGG + chr8_3:9465832-9465851 None:intergenic 45.0%
CCTCACCAGATGCTTAACTA+AGG - chr8_3:9465829-9465848 Msa1275510:CDS 45.0%
CTTGACAATCGACTACCCTA+AGG - chr8_3:9466171-9466190 Msa1275510:CDS 45.0%
!! TGAGTCGCAGGTATTTTGAG+GGG + chr8_3:9466508-9466527 None:intergenic 45.0%
! GTACTTTTATGTCGTGCCTG+TGG - chr8_3:9466635-9466654 Msa1275510:intron 45.0%
! GTTTGGCTTATGCATTGCTG+AGG - chr8_3:9466892-9466911 Msa1275510:five_prime_UTR 45.0%
CTTATGCATTGCTGAGGTGA+AGG - chr8_3:9466898-9466917 Msa1275510:five_prime_UTR 45.0%
ATGAGAGAAAAACGGGGTAC+TGG - chr8_3:9467223-9467242 Msa1275510:five_prime_UTR 45.0%
! ACACCTTTGATCGGAAGTGC+CGG + chr8_3:9462527-9462546 None:intergenic 50.0%
GTCCGTGCTTCATAAACCAC+CGG - chr8_3:9462613-9462632 Msa1275510:intron 50.0%
! TTCAATTGGTGGACAGCCAG+AGG + chr8_3:9463604-9463623 None:intergenic 50.0%
TTTGAAAAGTCGGCTGCGGT+AGG + chr8_3:9463759-9463778 None:intergenic 50.0%
! TTATACGGGAATGGAGCGTC+TGG - chr8_3:9463854-9463873 Msa1275510:intron 50.0%
! CTCAAAGAAGGCACAAGGTG+TGG + chr8_3:9464069-9464088 None:intergenic 50.0%
!! CAGGAGCTTTTTAGTGCACC+AGG + chr8_3:9464962-9464981 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8_3:9465084-9465103 Msa1275510:intron 50.0%
GTGTCTAACACCGACACATG+TGG + chr8_3:9465746-9465765 None:intergenic 50.0%
CGGTCGGACACACCTTTGAT+CGG + chr8_3:9462536-9462555 None:intergenic 55.0%
TTGTGTTGCGACAGGACACC+AGG - chr8_3:9463239-9463258 Msa1275510:intron 55.0%
AATCTCCGGGCCAAAACCTC+TGG - chr8_3:9463585-9463604 Msa1275510:intron 55.0%
!! TGGTGGACAGCCAGAGGTTT+TGG + chr8_3:9463598-9463617 None:intergenic 55.0%
! GCATGCACGCGCGTTGACAA+CGG + chr8_3:9462103-9462122 None:intergenic 60.0%
! GCACCGGCACTTCCGATCAA+AGG - chr8_3:9462521-9462540 Msa1275510:intron 60.0%
TTGCGACAGGACACCAGGAC+AGG - chr8_3:9463244-9463263 Msa1275510:intron 60.0%
ACAGGACACCAGGACAGGCT+AGG - chr8_3:9463249-9463268 Msa1275510:intron 60.0%
GCATGTCACCTAGCCTGTCC+TGG + chr8_3:9463260-9463279 None:intergenic 60.0%
!! GACAGCCAGAGGTTTTGGCC+CGG + chr8_3:9463593-9463612 None:intergenic 60.0%
TTCTCGGACCCTGCGTATGC+AGG + chr8_3:9464981-9465000 None:intergenic 60.0%
TGCATACGCAGGGTCCGAGA+AGG - chr8_3:9464980-9464999 Msa1275510:intron 60.0%
GCATACGCAGGGTCCGAGAA+GGG - chr8_3:9464981-9465000 Msa1275510:intron 60.0%
CATACGCAGGGTCCGAGAAG+GGG - chr8_3:9464982-9465001 Msa1275510:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8_3:9465095-9465114 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 9462090 9467258 9462090 ID=Msa1275510;Name=Msa1275510
chr8_3 mRNA 9462090 9467258 9462090 ID=Msa1275510-mRNA-1;Parent=Msa1275510;Name=Msa1275510-mRNA-1;_AED=0.04;_eAED=0.04;_QI=589|1|1|1|0.25|0|5|347|425
chr8_3 exon 9462090 9462178 9462090 ID=Msa1275510-mRNA-1:exon:3972;Parent=Msa1275510-mRNA-1
chr8_3 exon 9462228 9462482 9462228 ID=Msa1275510-mRNA-1:exon:3971;Parent=Msa1275510-mRNA-1
chr8_3 exon 9464760 9464939 9464760 ID=Msa1275510-mRNA-1:exon:3970;Parent=Msa1275510-mRNA-1
chr8_3 exon 9465092 9466328 9465092 ID=Msa1275510-mRNA-1:exon:3969;Parent=Msa1275510-mRNA-1
chr8_3 exon 9466806 9467258 9466806 ID=Msa1275510-mRNA-1:exon:3968;Parent=Msa1275510-mRNA-1
chr8_3 five_prime_UTR 9466806 9467258 9466806 ID=Msa1275510-mRNA-1:five_prime_utr;Parent=Msa1275510-mRNA-1
chr8_3 five_prime_UTR 9466193 9466328 9466193 ID=Msa1275510-mRNA-1:five_prime_utr;Parent=Msa1275510-mRNA-1
chr8_3 CDS 9465092 9466192 9465092 ID=Msa1275510-mRNA-1:cds;Parent=Msa1275510-mRNA-1
chr8_3 CDS 9464763 9464939 9464763 ID=Msa1275510-mRNA-1:cds;Parent=Msa1275510-mRNA-1
chr8_3 three_prime_UTR 9464760 9464762 9464760 ID=Msa1275510-mRNA-1:three_prime_utr;Parent=Msa1275510-mRNA-1
chr8_3 three_prime_UTR 9462228 9462482 9462228 ID=Msa1275510-mRNA-1:three_prime_utr;Parent=Msa1275510-mRNA-1
chr8_3 three_prime_UTR 9462090 9462178 9462090 ID=Msa1275510-mRNA-1:three_prime_utr;Parent=Msa1275510-mRNA-1
Gene Sequence

>Msa1275510

ATGCCGAAAACAAGTTTACAGGAATCTGGTTCTGTTATGAAGAGGTCTAAAAAGACAACTTTGATTTCTCAACATGTGTATAATTGTGTTGCGACAGGACACCAGGACAGGCTAGGTGACATGCCAGATTGCCTTATTCATCATATTTTGTCTTTTATGGAGACAAGAGATGCAATTCGAACTTGTGTTCTATCGAAAAGGTGGAGGTATATTTGGACATCAATTCCCTGTCTGTACTTCAACAGCAAATCATTCACTCGGTTGGTTGATTTCAAGAAGTTTGTGTTGTGGGTTCTATCTCATCGCGATAATTCTCATGTCAAAGTTCTTATTTACTATCGCTTTGGGGTAGATTATGCGACGGATCAGTATCTTTTGAATAAGGTTATTGAATATGCAGCATTACATGGTGTCGAAGAAATCAGAATTAATCTCCGGGCCAAAACCTCTGGCTGTCCACCAATTGAAATTCCGTTGCCTCTTTTTACTTGCCAGTCCTTGAAAAGACTCGAGTTAAAAGATTGCCAACCTACAAACGTCTCTTCTCCTTTTGGTTGCAAATCATTGGACATTTTGCACCTCGAGCATTTTTCAATGTTTCCTACCGCAGCCGACTTTTCAAATCCATTTGCAAGTTTAGCCGAACTTTTTGGTTTTACAACATTGACAGCTTTGCACCTAAATAGCTTTGCCCTATGTTATACGGGAATGGAGCGTCTGGATCCATTTGCTAATTGTGTCAATTTGAAGATTTTGCAATTAAGTGAAATGTCCTTTAAGTCAGATTTGAGTCCTAAGGATTTTGTGATATCTGCTCCGCAACTCAGTAACTTGAGTCTAATTTGCAACCGCTTTAGATGTAAGATCGTAGTTACTTCACCACAGCTTCTCAATTTCAGTTACTTGTATTCCACACCTTGTGCCTTCTTTGAGTTTAGTCTTCCTTCTTTGGATGGATTGATCATTGATGTTCATGAATTACACGAACCTTTGGAAAAATCTCATCGAAATAAAAGAGAGGAGACTTTACATGGTTTGATCAATATGTTACGGGGACATCATAAGGCTGAAGCTGTTAAACTATCCTTCTGTACAGTTGCGGTTACTTGTGGGGCTGCAGCCTTAGAAAAGCCAGAATGTTTGTCTTATAGTAAATGGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTCATCAGCAAACTCGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGTAGACTTTGAGATTGTGAATATTTAA
Protein sequence

>Msa1275510

MPKTSLQESGSVMKRSKKTTLISQHVYNCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYIWTSIPCLYFNSKSFTRLVDFKKFVLWVLSHRDNSHVKVLIYYRFGVDYATDQYLLNKVIEYAALHGVEEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCQPTNVSSPFGCKSLDILHLEHFSMFPTAADFSNPFASLAELFGFTTLTALHLNSFALCYTGMERLDPFANCVNLKILQLSEMSFKSDLSPKDFVISAPQLSNLSLICNRFRCKIVVTSPQLLNFSYLYSTPCAFFEFSLPSLDGLIIDVHELHEPLEKSHRNKREETLHGLINMLRGHHKAEAVKLSFCTVAVTCGAAALEKPECLSYSKWKSLNFGVGSTYKIFISKLDHITAYFRNCSQHVDFEIVNI*