AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336480 MtrunA17_Chr5g0430101 93.110 508 35 0 22 529 1 508 0.0 983
Msa1336480 MtrunA17_Chr5g0430131 83.725 510 81 2 22 529 1 510 0.0 864
Msa1336480 MtrunA17_Chr5g0430091 83.562 511 81 2 22 529 1 511 0.0 860
Msa1336480 MtrunA17_Chr5g0430081 78.782 509 105 2 24 529 2 510 0.0 816
Msa1336480 MtrunA17_Chr5g0430031 76.471 510 117 2 23 529 3 512 0.0 808
Msa1336480 MtrunA17_Chr5g0430111 80.986 426 78 2 22 444 1 426 0.0 710
Msa1336480 MtrunA17_Chr8g0390881 61.034 503 189 3 27 523 4 505 0.0 639
Msa1336480 MtrunA17_Chr6g0484841 59.336 482 192 3 44 522 24 504 0.0 612
Msa1336480 MtrunA17_Chr6g0484811 57.086 501 209 3 28 523 7 506 0.0 579
Msa1336480 MtrunA17_Chr5g0430071 79.494 356 71 1 170 523 3 358 0.0 570
Msa1336480 MtrunA17_Chr2g0310391 47.600 500 246 6 33 523 2 494 9.60e-159 461
Msa1336480 MtrunA17_Chr2g0310381 49.471 473 225 5 58 523 29 494 1.91e-157 457
Msa1336480 MtrunA17_Chr8g0382901 49.287 491 234 6 39 523 474 955 9.42e-157 471
Msa1336480 MtrunA17_Chr8g0382901 49.893 467 214 6 56 521 27 474 3.65e-149 451
Msa1336480 MtrunA17_Chr4g0058231 43.651 504 256 11 34 522 8 498 4.39e-136 403
Msa1336480 MtrunA17_Chr3g0116681 40.041 492 280 7 30 515 14 496 9.75e-132 392
Msa1336480 MtrunA17_Chr3g0101601 41.365 498 275 9 27 519 9 494 1.14e-129 387
Msa1336480 MtrunA17_Chr3g0101631 40.202 495 284 7 27 519 9 493 6.36e-129 385
Msa1336480 MtrunA17_Chr3g0101731 41.700 506 271 9 29 520 4 499 5.19e-128 383
Msa1336480 MtrunA17_Chr3g0101621 42.052 497 269 10 29 519 5 488 6.19e-128 382
Msa1336480 MtrunA17_Chr4g0058191 42.685 499 254 12 34 520 8 486 1.27e-127 381
Msa1336480 MtrunA17_Chr3g0101581 39.442 502 284 8 27 520 11 500 1.08e-126 379
Msa1336480 MtrunA17_Chr3g0101611 41.458 480 263 7 49 519 30 500 2.40e-126 379
Msa1336480 MtrunA17_Chr5g0403331 38.889 504 286 7 29 520 9 502 2.47e-126 379
Msa1336480 MtrunA17_Chr4g0047641 41.016 512 278 12 24 520 12 514 8.21e-126 378
Msa1336480 MtrunA17_Chr4g0047631 39.464 522 292 10 8 520 4 510 8.43e-126 377
Msa1336480 MtrunA17_Chr5g0403321 39.014 487 274 6 49 520 26 504 1.43e-125 377
Msa1336480 MtrunA17_Chr4g0047661 41.061 509 281 10 24 520 14 515 9.72e-125 375
Msa1336480 MtrunA17_Chr3g0101721 43.284 469 253 7 58 519 38 500 2.45e-124 374
Msa1336480 MtrunA17_Chr4g0035921 38.911 514 289 10 27 524 11 515 1.05e-123 372
Msa1336480 MtrunA17_Chr8g0344181 39.413 477 270 5 58 523 39 507 2.20e-123 371
Msa1336480 MtrunA17_Chr3g0101571 39.400 500 285 7 27 520 10 497 3.90e-123 370
Msa1336480 MtrunA17_Chr8g0344151 38.831 479 274 5 58 525 37 507 5.36e-123 370
Msa1336480 MtrunA17_Chr5g0405001 40.671 477 269 8 56 523 43 514 6.51e-123 370
Msa1336480 MtrunA17_Chr6g0472311 40.396 505 278 8 33 520 17 515 2.65e-122 369
Msa1336480 MtrunA17_Chr5g0430171 81.223 229 42 1 22 249 1 229 7.91e-122 357
Msa1336480 MtrunA17_Chr5g0403351 35.700 507 306 6 26 520 3 501 1.49e-120 363
Msa1336480 MtrunA17_Chr4g0058201 42.340 470 257 8 58 520 29 491 1.54e-120 363
Msa1336480 MtrunA17_Chr4g0047691 39.530 511 284 10 24 520 14 513 1.60e-119 362
Msa1336480 MtrunA17_Chr5g0445461 37.649 502 298 8 27 522 8 500 4.93e-119 360
Msa1336480 MtrunA17_Chr3g0116741 40.535 486 271 10 34 509 26 503 1.43e-118 359
Msa1336480 MtrunA17_Chr3g0101711 38.889 504 286 9 30 519 6 501 1.63e-118 358
Msa1336480 MtrunA17_Chr3g0101701 39.066 471 273 6 58 520 39 503 1.72e-118 358
Msa1336480 MtrunA17_Chr3g0101821 41.107 506 272 9 29 519 4 498 2.14e-118 358
Msa1336480 MtrunA17_Chr4g0020041 39.802 505 278 11 31 519 5 499 4.01e-118 357
Msa1336480 MtrunA17_Chr4g0058261 40.702 484 266 9 49 519 55 530 5.00e-118 358
Msa1336480 MtrunA17_Chr1g0162811 38.462 507 289 10 30 523 5 501 6.00e-118 357
Msa1336480 MtrunA17_Chr4g0076161 40.198 505 277 10 31 520 7 501 7.23e-118 357
Msa1336480 MtrunA17_Chr1g0156101 40.369 488 260 9 58 522 33 512 7.97e-118 357
Msa1336480 MtrunA17_Chr8g0372251 41.387 476 264 9 58 523 36 506 1.09e-117 357
Msa1336480 MtrunA17_Chr8g0361471 38.400 500 288 8 31 519 8 498 1.39e-117 356
Msa1336480 MtrunA17_Chr6g0463791 39.458 517 281 12 14 520 3 497 2.71e-117 355
Msa1336480 MtrunA17_Chr3g0094171 38.554 498 287 9 37 523 19 508 2.84e-117 355
Msa1336480 MtrunA17_Chr6g0465511 38.200 500 289 8 31 519 8 498 3.39e-117 355
Msa1336480 MtrunA17_Chr3g0101761 40.918 501 272 8 29 515 4 494 5.03e-117 355
Msa1336480 MtrunA17_Chr5g0431641 38.386 508 289 11 24 522 8 500 6.68e-117 354
Msa1336480 MtrunA17_Chr1g0162801 41.633 502 270 10 34 523 14 504 1.86e-116 353
Msa1336480 MtrunA17_Chr3g0101691 37.154 506 296 8 28 519 5 502 2.94e-116 353
Msa1336480 MtrunA17_Chr3g0101811 38.462 520 281 9 29 519 4 513 3.16e-116 353
Msa1336480 MtrunA17_Chr6g0466331 38.200 500 289 8 31 519 8 498 3.80e-116 352
Msa1336480 MtrunA17_Chr3g0101751 40.551 508 280 8 19 515 5 501 4.30e-116 352
Msa1336480 MtrunA17_Chr3g0101661 38.771 472 272 7 58 520 39 502 4.55e-116 353
Msa1336480 MtrunA17_Chr5g0445441 38.247 502 295 8 27 522 49 541 1.57e-115 352
Msa1336480 MtrunA17_Chr3g0101831 41.483 499 275 8 32 519 7 499 1.69e-115 351
Msa1336480 MtrunA17_Chr1g0167321 41.270 504 273 10 28 520 7 498 3.12e-115 350
Msa1336480 MtrunA17_Chr6g0463801 40.632 475 269 7 49 519 29 494 3.49e-115 350
Msa1336480 MtrunA17_Chr4g0024771 36.800 500 305 7 27 522 8 500 2.77e-114 347
Msa1336480 MtrunA17_Chr5g0431671 39.195 472 271 8 58 522 39 501 2.88e-114 347
Msa1336480 MtrunA17_Chr5g0445451 37.600 500 301 7 27 522 8 500 7.70e-114 346
Msa1336480 MtrunA17_Chr7g0258221 37.475 507 297 9 31 524 7 506 1.49e-113 346
Msa1336480 MtrunA17_Chr4g0058281 39.558 498 284 8 30 519 23 511 3.13e-113 345
Msa1336480 MtrunA17_Chr5g0419691 39.787 470 265 7 49 508 21 482 1.03e-112 343
Msa1336480 MtrunA17_Chr5g0445381 38.956 498 289 8 28 519 40 528 1.47e-112 344
Msa1336480 MtrunA17_Chr3g0101651 38.478 473 273 7 58 520 39 503 1.98e-112 343
Msa1336480 MtrunA17_Chr3g0101801 39.922 511 281 9 24 519 6 505 3.80e-112 342
Msa1336480 MtrunA17_Chr3g0101671 37.200 500 293 8 32 519 12 502 9.40e-112 341
Msa1336480 MtrunA17_Chr5g0430151 84.066 182 29 0 348 529 1 182 1.50e-111 328
Msa1336480 MtrunA17_Chr8g0344191 35.526 532 316 9 1 518 16 534 1.71e-111 342
Msa1336480 MtrunA17_Chr3g0101741 42.459 431 234 5 92 519 1 420 9.93e-111 336
Msa1336480 MtrunA17_Chr5g0445531 39.066 471 271 8 58 522 39 499 5.88e-109 334
Msa1336480 MtrunA17_Chr5g0446161 37.607 468 278 8 56 519 40 497 6.75e-109 333
Msa1336480 MtrunA17_Chr3g0094231 37.815 476 274 9 58 523 37 500 1.33e-108 333
Msa1336480 MtrunA17_Chr1g0174451 36.257 513 301 11 29 524 4 507 3.91e-108 332
Msa1336480 MtrunA17_Chr8g0357431 39.645 507 286 9 26 520 2 500 8.23e-108 331
Msa1336480 MtrunA17_Chr4g0011921 39.592 490 277 11 28 508 3 482 1.35e-107 330
Msa1336480 MtrunA17_Chr8g0357421 39.882 509 281 9 26 520 2 499 1.35e-107 330
Msa1336480 MtrunA17_Chr4g0011871 38.641 471 270 7 49 508 21 483 1.51e-107 330
Msa1336480 MtrunA17_Chr3g0086651 39.873 474 262 8 66 523 41 507 1.92e-107 330
Msa1336480 MtrunA17_Chr1g0174471 36.686 507 303 9 29 524 23 522 2.42e-107 330
Msa1336480 MtrunA17_Chr4g0061381 38.055 473 270 7 66 523 40 504 2.48e-107 330
Msa1336480 MtrunA17_Chr3g0086691 39.662 474 267 7 64 523 39 507 4.25e-107 329
Msa1336480 MtrunA17_Chr5g0445421 35.872 499 290 7 27 522 82 553 7.98e-107 330
Msa1336480 MtrunA17_Chr8g0356001 34.714 507 313 7 24 519 4 503 3.61e-106 327
Msa1336480 MtrunA17_Chr1g0205361 34.059 505 315 5 22 519 1 494 8.77e-106 325
Msa1336480 MtrunA17_Chr3g0086661 39.706 476 264 8 64 523 39 507 8.80e-106 326
Msa1336480 MtrunA17_Chr5g0446151 37.060 483 289 9 41 519 27 498 9.45e-106 325
Msa1336480 MtrunA17_Chr4g0011961 37.832 489 286 10 28 508 3 481 5.38e-105 323
Msa1336480 MtrunA17_Chr8g0390871 62.719 228 84 1 296 523 1 227 7.80e-105 313
Msa1336480 MtrunA17_Chr3g0084921 35.453 519 307 9 18 523 8 511 2.17e-104 322
Msa1336480 MtrunA17_Chr1g0174461 36.531 490 287 9 49 524 27 506 2.68e-104 322
Msa1336480 MtrunA17_Chr2g0280261 38.784 477 277 8 49 520 26 492 5.30e-104 321
Msa1336480 MtrunA17_Chr1g0160851 33.861 505 316 6 22 519 1 494 8.52e-104 320
Msa1336480 MtrunA17_Chr4g0011881 38.333 480 281 8 44 515 17 489 1.07e-103 320
Msa1336480 MtrunA17_Chr1g0174441 36.122 490 290 9 49 523 46 527 6.01e-103 319
Msa1336480 MtrunA17_Chr1g0156081 39.095 486 269 8 58 522 57 536 1.39e-102 318
Msa1336480 MtrunA17_Chr5g0395321 33.659 511 312 7 19 520 4 496 2.40e-102 318
Msa1336480 MtrunA17_Chr1g0174481 35.573 506 302 9 31 523 6 500 5.66e-102 316
Msa1336480 MtrunA17_Chr4g0011981 38.901 473 262 10 50 508 23 482 1.09e-101 315
Msa1336480 MtrunA17_Chr7g0218601 36.605 489 285 10 41 515 15 492 1.88e-101 314
Msa1336480 MtrunA17_Chr7g0246221 35.547 512 297 8 18 516 6 497 1.92e-101 315
Msa1336480 MtrunA17_Chr7g0254641 35.052 485 289 6 58 523 38 515 5.63e-101 314
Msa1336480 MtrunA17_Chr5g0406651 39.004 482 276 8 44 515 17 490 7.63e-101 313
Msa1336480 MtrunA17_Chr7g0218611 37.100 469 275 8 58 515 34 493 1.24e-100 312
Msa1336480 MtrunA17_Chr7g0235551 34.563 515 307 10 21 519 4 504 3.73e-100 311
Msa1336480 MtrunA17_Chr8g0355961 34.851 505 311 7 26 519 6 503 2.40e-99 309
Msa1336480 MtrunA17_Chr4g0011901 37.603 484 284 10 44 518 18 492 4.56e-99 308
Msa1336480 MtrunA17_Chr5g0395331 33.266 493 308 7 40 520 20 503 5.28e-99 308
Msa1336480 MtrunA17_Chr7g0265611 35.671 499 297 8 36 519 25 514 2.71e-98 307
Msa1336480 MtrunA17_Chr5g0395381 32.544 507 298 7 19 520 4 471 1.11e-97 304
Msa1336480 MtrunA17_Chr5g0431501 35.759 481 285 8 58 524 34 504 3.41e-96 301
Msa1336480 MtrunA17_Chr5g0431461 35.759 481 285 8 58 524 34 504 3.41e-96 301
Msa1336480 MtrunA17_Chr5g0431511 35.833 480 286 7 58 524 34 504 6.84e-96 300
Msa1336480 MtrunA17_Chr4g0039901 34.328 469 299 4 54 518 32 495 7.36e-96 300
Msa1336480 MtrunA17_Chr4g0030701 35.234 491 287 8 58 524 36 519 1.55e-95 300
Msa1336480 MtrunA17_Chr1g0200961 35.471 499 300 7 32 519 7 494 2.92e-95 298
Msa1336480 MtrunA17_Chr1g0205371 32.673 505 323 5 22 519 1 495 7.84e-94 295
Msa1336480 MtrunA17_Chr1g0164211 34.454 476 294 7 53 519 25 491 1.03e-93 294
Msa1336480 MtrunA17_Chr2g0314721 34.221 488 289 10 17 490 7 476 2.04e-92 291
Msa1336480 MtrunA17_Chr2g0314731 34.519 478 291 9 22 490 1 465 3.07e-92 290
Msa1336480 MtrunA17_Chr8g0362701 33.137 510 314 8 32 524 7 506 6.41e-92 290
Msa1336480 MtrunA17_Chr1g0156061 38.608 474 221 11 58 522 56 468 2.95e-91 287
Msa1336480 MtrunA17_Chr1g0176831 34.100 478 293 7 22 490 31 495 3.22e-91 288
Msa1336480 MtrunA17_Chr8g0362481 34.899 447 267 8 92 524 1 437 8.53e-91 285
Msa1336480 MtrunA17_Chr5g0430041 74.138 174 39 1 348 515 1 174 1.10e-90 275
Msa1336480 MtrunA17_Chr4g0057001 34.469 499 304 8 36 525 32 516 1.34e-90 287
Msa1336480 MtrunA17_Chr6g0451691 34.151 530 304 14 18 515 3 519 1.80e-90 287
Msa1336480 MtrunA17_Chr8g0339331 34.343 495 297 12 48 523 29 514 7.00e-90 285
Msa1336480 MtrunA17_Chr4g0056951 35.371 458 275 6 78 525 65 511 1.36e-89 284
Msa1336480 MtrunA17_Chr4g0030711 33.745 486 290 8 64 524 44 522 4.31e-89 283
Msa1336480 MtrunA17_Chr8g0339311 35.772 492 285 12 54 523 40 522 8.80e-89 282
Msa1336480 MtrunA17_Chr1g0197871 34.156 486 299 8 25 502 3 475 9.81e-89 281
Msa1336480 MtrunA17_Chr5g0401681 34.722 504 293 11 30 522 12 490 1.44e-88 281
Msa1336480 MtrunA17_Chr7g0246131 33.069 505 320 4 18 516 6 498 1.68e-88 281
Msa1336480 MtrunA17_Chr1g0197881 33.198 491 307 10 22 505 1 477 2.60e-88 280
Msa1336480 MtrunA17_Chr1g0197891 33.198 491 308 10 22 505 1 478 3.36e-88 280
Msa1336480 MtrunA17_Chr1g0197851 32.790 491 310 9 22 505 1 478 3.58e-88 280
Msa1336480 MtrunA17_Chr7g0255531 31.423 506 315 10 33 523 9 497 7.91e-88 279
Msa1336480 MtrunA17_Chr6g0451751 33.852 514 308 11 25 515 11 515 1.96e-87 279
Msa1336480 MtrunA17_Chr7g0258211 33.911 519 309 11 22 519 1 506 1.03e-86 276
Msa1336480 MtrunA17_Chr7g0246121 34.858 459 278 7 68 515 45 493 2.17e-86 275
Msa1336480 MtrunA17_Chr4g0052881 34.942 518 292 13 21 522 3 491 2.56e-86 275
Msa1336480 MtrunA17_Chr1g0207841 34.298 484 288 8 64 524 45 521 3.75e-86 275
Msa1336480 MtrunA17_Chr7g0246151 33.406 458 288 6 68 515 45 495 3.93e-86 275
Msa1336480 MtrunA17_Chr8g0351801 33.264 481 284 9 67 519 44 515 4.64e-86 275
Msa1336480 MtrunA17_Chr4g0008101 34.351 524 301 15 28 523 15 523 5.97e-86 275
Msa1336480 MtrunA17_Chr5g0401691 31.650 515 326 11 10 517 7 502 1.67e-85 273
Msa1336480 MtrunA17_Chr6g0451741 33.015 524 310 12 29 524 36 546 4.53e-85 273
Msa1336480 MtrunA17_Chr4g0052861 34.170 518 295 15 21 522 3 490 8.37e-85 271
Msa1336480 MtrunA17_Chr2g0304871 35.234 491 284 13 57 523 34 514 1.00e-84 271
Msa1336480 MtrunA17_Chr6g0458561 33.074 514 313 14 28 523 27 527 1.02e-84 272
Msa1336480 MtrunA17_Chr6g0451781 33.333 486 290 10 65 525 82 558 1.65e-84 272
Msa1336480 MtrunA17_Chr4g0052851 34.402 468 285 10 58 522 34 482 2.30e-84 270
Msa1336480 MtrunA17_Chr3g0082701 34.211 532 310 12 22 523 3 524 9.66e-84 269
Msa1336480 MtrunA17_Chr4g0046631 34.827 491 291 10 53 525 41 520 1.44e-82 266
Msa1336480 MtrunA17_Chr7g0224551 30.916 524 314 12 29 523 5 509 3.16e-82 265
Msa1336480 MtrunA17_Chr6g0451641 31.767 532 319 13 20 521 3 520 7.52e-82 264
Msa1336480 MtrunA17_Chr4g0053621 33.008 512 308 9 27 522 2 494 2.09e-81 263
Msa1336480 MtrunA17_Chr4g0046351 30.707 495 315 11 49 522 25 512 4.47e-81 262
Msa1336480 MtrunA17_Chr7g0224561 30.534 524 316 12 29 523 5 509 2.22e-80 260
Msa1336480 MtrunA17_Chr4g0046321 30.707 495 315 11 49 522 25 512 2.38e-80 260
Msa1336480 MtrunA17_Chr2g0296651 33.004 506 307 9 29 522 5 490 1.55e-79 257
Msa1336480 MtrunA17_Chr4g0046331 29.883 512 323 12 40 522 10 514 4.40e-79 257
Msa1336480 MtrunA17_Chr7g0246181 34.517 507 306 6 18 515 6 495 1.36e-78 255
Msa1336480 MtrunA17_Chr6g0466901 34.350 492 288 12 22 487 1 483 1.49e-78 255
Msa1336480 MtrunA17_Chr6g0466941 33.401 494 291 13 22 487 1 484 7.23e-78 254
Msa1336480 MtrunA17_Chr1g0213671 32.377 488 296 13 53 519 30 504 9.81e-78 253
Msa1336480 MtrunA17_Chr4g0017411 33.333 456 280 8 37 489 14 448 1.50e-77 252
Msa1336480 MtrunA17_Chr2g0310351 52.736 201 94 1 322 522 1 200 3.54e-73 231
Msa1336480 MtrunA17_Chr4g0039391 32.334 467 293 10 67 522 45 499 3.49e-71 236
Msa1336480 MtrunA17_Chr6g0451681 31.548 504 266 14 27 518 35 471 6.47e-71 234
Msa1336480 MtrunA17_Chr5g0431591 37.578 322 187 5 207 522 5 318 3.32e-70 227
Msa1336480 MtrunA17_Chr8g0346261 34.152 448 266 14 59 493 86 517 6.54e-69 231
Msa1336480 MtrunA17_Chr1g0200951 32.886 447 269 13 60 488 64 497 1.22e-68 229
Msa1336480 MtrunA17_Chr2g0296661 33.047 466 278 11 69 518 44 491 9.20e-68 226
Msa1336480 MtrunA17_Chr5g0419451 32.972 461 276 15 42 488 45 486 5.96e-66 222
Msa1336480 MtrunA17_Chr1g0160861 32.344 337 212 4 190 519 8 335 8.48e-63 209
Msa1336480 MtrunA17_Chr4g0011851 47.423 194 101 1 315 508 9 201 9.55e-62 202
Msa1336480 MtrunA17_Chr5g0430051 87.156 109 14 0 27 135 8 116 1.40e-61 197
Msa1336480 MtrunA17_Chr4g0011941 45.226 199 108 1 322 520 1 198 1.28e-59 196
Msa1336480 MtrunA17_Chr8g0377341 30.917 469 277 15 60 504 70 515 1.66e-59 205
Msa1336480 MtrunA17_Chr4g0058211 46.000 200 105 2 321 520 18 214 4.70e-58 192
Msa1336480 MtrunA17_Chr8g0370651 27.205 533 351 15 18 524 3 524 3.27e-57 199
Msa1336480 MtrunA17_Chr5g0446101 34.177 316 195 5 207 519 5 310 4.76e-57 192
Msa1336480 MtrunA17_Chr8g0370641 27.307 531 349 15 18 524 3 520 6.76e-56 196
Msa1336480 MtrunA17_Chr5g0432751 29.213 445 296 9 56 487 32 470 1.39e-55 194
Msa1336480 MtrunA17_Chr3g0107611 27.680 513 324 15 11 491 5 502 1.55e-54 192
Msa1336480 MtrunA17_Chr6g0463621 43.902 205 105 4 322 520 1 201 9.14e-53 177
Msa1336480 MtrunA17_Chr3g0107541 28.825 451 284 10 66 491 59 497 2.85e-52 186
Msa1336480 MtrunA17_Chr1g0198191 28.778 483 302 16 28 488 21 483 3.40e-52 185
Msa1336480 MtrunA17_Chr3g0101591 41.000 200 117 1 321 520 38 236 5.10e-52 177
Msa1336480 MtrunA17_Chr5g0445371 38.722 266 126 6 259 523 2 231 4.18e-51 175
Msa1336480 MtrunA17_Chr1g0210091 28.598 528 336 14 9 506 3 519 1.36e-50 181
Msa1336480 MtrunA17_Chr4g0028321 54.015 137 61 2 389 524 24 159 1.68e-48 165
Msa1336480 MtrunA17_Chr1g0174431 42.105 209 111 5 322 523 1 206 2.94e-48 166
Msa1336480 MtrunA17_Chr5g0445761 49.438 178 89 1 322 499 1 177 5.42e-48 165
Msa1336480 MtrunA17_Chr6g0484771 56.835 139 59 1 92 230 1 138 4.90e-47 160
Msa1336480 MtrunA17_Chr6g0451811 39.720 214 123 3 318 529 1 210 5.61e-47 162
Msa1336480 MtrunA17_Chr5g0445751 34.603 315 184 8 22 322 1 307 6.96e-47 166
Msa1336480 MtrunA17_Chr2g0280071 25.833 480 330 10 58 519 64 535 9.28e-47 174
Msa1336480 MtrunA17_Chr2g0280081 28.169 426 284 9 81 491 558 976 6.69e-46 172
Msa1336480 MtrunA17_Chr2g0280081 26.974 456 307 11 81 521 57 501 8.81e-43 163
Msa1336480 MtrunA17_Chr6g0463611 32.095 296 186 7 31 319 21 308 8.97e-46 163
Msa1336480 MtrunA17_Chr4g0074581 26.692 532 352 17 9 518 23 538 3.43e-45 167
Msa1336480 MtrunA17_Chr5g0445351 46.951 164 86 1 352 515 54 216 1.00e-44 157
Msa1336480 MtrunA17_Chr5g0409051 27.893 484 313 17 34 490 5 479 8.20e-44 162
Msa1336480 MtrunA17_Chr6g0451771 41.837 196 108 4 322 515 22 213 2.07e-43 154
Msa1336480 MtrunA17_Chr1g0174421 31.546 317 188 6 16 323 21 317 2.18e-43 157
Msa1336480 MtrunA17_Chr4g0011861 33.984 256 160 4 49 295 21 276 3.29e-43 155
Msa1336480 MtrunA17_Chr2g0280121 27.804 428 285 11 81 491 61 481 3.64e-43 160
Msa1336480 MtrunA17_Chr5g0423621 39.011 182 108 2 338 519 1 179 4.34e-43 151
Msa1336480 MtrunA17_Chr5g0413911 26.407 462 306 12 58 490 43 499 4.36e-43 160
Msa1336480 MtrunA17_Chr4g0046681 41.176 204 114 4 322 523 31 230 9.38e-43 152
Msa1336480 MtrunA17_Chr2g0314781 41.176 153 89 1 338 490 1 152 8.43e-42 147
Msa1336480 MtrunA17_Chr4g0030741 31.412 347 212 8 10 345 18 349 1.05e-41 153
Msa1336480 MtrunA17_Chr2g0280041 26.216 473 321 11 66 519 71 534 3.97e-41 155
Msa1336480 MtrunA17_Chr5g0402971 31.119 286 177 5 50 315 30 315 5.10e-41 150
Msa1336480 MtrunA17_Chr8g0364651 27.160 486 317 15 58 523 31 499 1.67e-40 153
Msa1336480 MtrunA17_Chr3g0101541 48.175 137 70 1 370 506 1 136 1.84e-40 142
Msa1336480 MtrunA17_Chr5g0445361 51.562 128 61 1 392 519 8 134 8.02e-40 141
Msa1336480 MtrunA17_Chr8g0387101 25.771 454 315 10 81 519 59 505 1.36e-39 150
Msa1336480 MtrunA17_Chr2g0310371 58.475 118 49 0 58 175 29 146 4.48e-38 136
Msa1336480 MtrunA17_Chr5g0402981 39.796 196 107 5 334 524 4 193 4.81e-37 135
Msa1336480 MtrunA17_Chr3g0117301 49.153 118 59 1 375 492 3 119 1.27e-36 132
Msa1336480 MtrunA17_Chr4g0076171 39.683 189 86 4 338 520 1 167 1.54e-36 133
Msa1336480 MtrunA17_Chr3g0086681 41.104 163 91 2 365 523 8 169 3.83e-35 130
Msa1336480 MtrunA17_Chr8g0364631 27.935 494 307 15 58 522 33 506 3.19e-34 135
Msa1336480 MtrunA17_Chr4g0046691 32.806 253 157 6 58 301 40 288 3.30e-34 131
Msa1336480 MtrunA17_Chr4g0046661 38.967 213 124 4 313 523 16 224 1.09e-33 127
Msa1336480 MtrunA17_Chr4g0011931 34.532 278 161 9 33 295 4 275 5.31e-33 127
Msa1336480 MtrunA17_Chr4g0046701 41.975 162 88 4 364 523 1 158 5.64e-33 123
Msa1336480 MtrunA17_Chr3g0105761 37.356 174 103 4 325 495 3 173 3.69e-32 122
Msa1336480 MtrunA17_Chr6g0477081 30.830 253 143 3 188 429 7 238 1.49e-31 122
Msa1336480 MtrunA17_Chr3g0116731 43.537 147 67 3 374 520 2 132 3.68e-31 117
Msa1336480 MtrunA17_Chr5g0445411 37.500 160 98 1 27 184 15 174 5.60e-31 118
Msa1336480 MtrunA17_Chr5g0431631 42.466 146 79 3 23 166 19 161 9.74e-31 117
Msa1336480 MtrunA17_Chr4g0046671 29.562 274 176 6 58 315 45 317 1.08e-30 121
Msa1336480 MtrunA17_Chr3g0117321 47.863 117 61 0 59 175 9 125 3.74e-30 114
Msa1336480 MtrunA17_Chr3g0107551 32.044 181 119 2 321 498 4 183 4.94e-30 117
Msa1336480 MtrunA17_Chr6g0451801 28.616 318 195 8 25 315 10 322 6.97e-30 119
Msa1336480 MtrunA17_Chr2g0334021 23.644 461 310 13 53 490 29 470 5.45e-29 120
Msa1336480 MtrunA17_Chr1g0207851 28.467 274 173 5 64 320 45 312 5.30e-28 115
Msa1336480 MtrunA17_Chr2g0280011 33.708 178 110 4 321 491 7 183 6.93e-28 110
Msa1336480 MtrunA17_Chr5g0444981 34.197 193 120 3 318 505 2 192 3.21e-27 109
Msa1336480 MtrunA17_Chr2g0280061 33.708 178 110 4 321 491 7 183 2.04e-26 107
Msa1336480 MtrunA17_Chr8g0351401 24.201 438 302 9 102 519 82 509 5.70e-25 108
Msa1336480 MtrunA17_Chr0c19g0493771 29.391 279 162 9 251 523 400 649 1.44e-23 104
Msa1336480 MtrunA17_Chr3g0107561 27.508 309 188 9 7 295 8 300 1.47e-23 101
Msa1336480 MtrunA17_Chr7g0225531 25.147 509 317 15 22 496 12 490 7.80e-23 102
Msa1336480 MtrunA17_Chr2g0293411 25.000 488 299 22 24 486 8 453 1.11e-22 101
Msa1336480 MtrunA17_Chr1g0203141 28.519 270 172 7 234 497 237 491 7.73e-22 99.0
Msa1336480 MtrunA17_Chr8g0351421 24.085 519 350 14 27 519 9 509 2.06e-21 97.4
Msa1336480 MtrunA17_Chr8g0351391 26.613 248 165 4 253 490 243 483 2.94e-21 97.1
Msa1336480 MtrunA17_Chr1g0203151 27.778 270 184 7 234 499 233 495 3.08e-21 97.1
Msa1336480 MtrunA17_Chr5g0396521 28.358 268 147 8 251 490 292 542 7.34e-21 96.3
Msa1336480 MtrunA17_Chr4g0030761 31.250 160 78 5 375 522 3 142 1.18e-20 88.6
Msa1336480 MtrunA17_Chr8g0381571 24.536 485 313 19 20 486 6 455 3.63e-20 93.6
Msa1336480 MtrunA17_Chr8g0381541 24.536 485 313 19 20 486 6 455 4.19e-20 93.6
Msa1336480 MtrunA17_Chr6g0449331 24.151 265 188 5 245 497 234 497 5.26e-20 93.2
Msa1336480 MtrunA17_Chr1g0151221 23.827 533 306 20 26 494 13 509 5.87e-20 93.2
Msa1336480 MtrunA17_Chr5g0445541 39.450 109 64 1 27 133 8 116 6.71e-20 85.9
Msa1336480 MtrunA17_Chr8g0351461 23.541 514 358 14 27 519 9 508 9.49e-20 92.4
Msa1336480 MtrunA17_Chr6g0479681 26.641 259 168 5 258 499 260 513 9.99e-20 92.4
Msa1336480 MtrunA17_Chr3g0116721 32.258 186 109 6 174 348 11 190 2.13e-19 86.7
Msa1336480 MtrunA17_Chr8g0351441 25.559 313 206 7 228 519 202 508 2.23e-19 91.3
Msa1336480 MtrunA17_Chr6g0457421 22.768 448 322 15 69 509 72 502 3.86e-19 90.5
Msa1336480 MtrunA17_Chr4g0076181 46.914 81 43 0 92 172 1 81 3.90e-19 84.7
Msa1336480 MtrunA17_Chr8g0372591 29.600 125 87 1 320 444 1 124 3.97e-19 84.0
Msa1336480 MtrunA17_Chr6g0449341 24.096 249 178 4 245 483 282 529 5.45e-19 90.1
Msa1336480 MtrunA17_Chr3g0119681 23.579 475 288 14 61 487 40 487 5.89e-19 90.1
Msa1336480 MtrunA17_Chr2g0293421 21.946 483 326 16 18 486 9 454 6.36e-19 89.7
Msa1336480 MtrunA17_Chr2g0314771 28.571 161 107 3 92 246 1 159 6.90e-19 84.0
Msa1336480 MtrunA17_Chr1g0204271 24.064 374 246 11 142 491 120 479 1.17e-18 89.0
Msa1336480 MtrunA17_Chr6g0472171 34.286 140 88 3 373 509 15 153 1.18e-18 83.2
Msa1336480 MtrunA17_Chr4g0004481 25.000 244 166 5 245 483 227 458 4.66e-18 87.0
Msa1336480 MtrunA17_Chr3g0105751 26.712 292 189 7 22 295 18 302 4.72e-18 86.3
Msa1336480 MtrunA17_Chr8g0351311 27.368 190 128 2 311 490 295 484 4.96e-18 87.0
Msa1336480 MtrunA17_Chr5g0429651 28.205 234 145 6 290 509 271 495 7.60e-18 86.7
Msa1336480 MtrunA17_Chr6g0449361 24.051 237 170 4 245 477 233 463 1.11e-17 85.9
Msa1336480 MtrunA17_Chr1g0163451 26.613 248 171 5 245 486 251 493 1.63e-17 85.5
Msa1336480 MtrunA17_Chr1g0182861 36.134 119 71 2 379 497 26 139 1.97e-17 79.7
Msa1336480 MtrunA17_Chr1g0176851 25.610 246 162 6 140 376 1 234 2.45e-17 81.6
Msa1336480 MtrunA17_Chr7g0260831 26.296 270 164 9 259 509 246 499 4.46e-17 84.0
Msa1336480 MtrunA17_Chr4g0026941 25.114 219 152 2 270 487 301 508 8.85e-17 83.2
Msa1336480 MtrunA17_Chr1g0179811 29.952 207 136 5 319 523 341 540 1.12e-16 83.2
Msa1336480 MtrunA17_Chr6g0449381 24.348 230 164 4 254 478 242 466 1.13e-16 82.8
Msa1336480 MtrunA17_Chr1g0184421 26.923 182 123 4 311 486 294 471 1.35e-16 82.8
Msa1336480 MtrunA17_Chr5g0445341 38.824 85 51 1 92 175 1 85 1.70e-16 74.7
Msa1336480 MtrunA17_Chr3g0128461 26.182 275 182 9 248 509 253 519 2.04e-16 82.0
Msa1336480 MtrunA17_Chr8g0354571 24.292 424 290 15 78 490 94 497 2.04e-16 82.0
Msa1336480 MtrunA17_Chr1g0184461 27.473 182 122 4 311 486 294 471 2.59e-16 81.6
Msa1336480 MtrunA17_Chr1g0163281 24.180 244 172 3 245 483 250 485 2.80e-16 81.6
Msa1336480 MtrunA17_Chr2g0310361 32.168 143 86 3 184 320 1 138 2.87e-16 75.9
Msa1336480 MtrunA17_Chr6g0449351 23.629 237 171 3 245 477 193 423 3.87e-16 80.9
Msa1336480 MtrunA17_Chr4g0063221 28.814 177 113 4 325 497 328 495 4.13e-16 81.3
Msa1336480 MtrunA17_Chr4g0038271 24.042 287 197 5 253 527 287 564 4.50e-16 81.3
Msa1336480 MtrunA17_Chr1g0163501 25.591 254 161 8 245 486 231 468 4.82e-16 80.9
Msa1336480 MtrunA17_Chr8g0354531 24.009 429 284 15 78 490 216 618 6.78e-16 80.9
Msa1336480 MtrunA17_Chr5g0431601 42.169 83 47 1 92 174 1 82 8.72e-16 72.4
Msa1336480 MtrunA17_Chr7g0248991 30.256 195 107 7 251 441 182 351 1.02e-15 79.0
Msa1336480 MtrunA17_Chr7g0260821 26.582 237 145 7 286 509 280 500 1.25e-15 79.7
Msa1336480 MtrunA17_Chr1g0163421 26.190 252 167 6 245 486 267 509 1.35e-15 79.7
Msa1336480 MtrunA17_Chr1g0163371 26.923 182 128 2 310 486 10 191 1.83e-15 75.9
Msa1336480 MtrunA17_Chr6g0484761 57.407 54 23 0 470 523 1 54 1.93e-15 70.9
Msa1336480 MtrunA17_Chr1g0154731 25.581 258 170 9 259 509 256 498 3.07e-15 78.2
Msa1336480 MtrunA17_Chr5g0408181 22.756 479 310 19 27 490 4 437 3.16e-15 78.2
Msa1336480 MtrunA17_Chr8g0380501 25.514 243 157 7 245 478 225 452 3.88e-15 78.2
Msa1336480 MtrunA17_Chr7g0215181 29.448 163 109 4 328 490 326 482 4.05e-15 78.2
Msa1336480 MtrunA17_Chr1g0164321 23.077 247 172 4 253 483 269 513 4.66e-15 77.8
Msa1336480 MtrunA17_Chr4g0004601 21.140 421 303 13 76 486 99 500 7.31e-15 77.4
Msa1336480 MtrunA17_Chr1g0163511 27.513 189 125 3 304 483 300 485 8.88e-15 77.0
Msa1336480 MtrunA17_Chr6g0472221 25.095 263 182 7 243 499 257 510 9.01e-15 77.0
Msa1336480 MtrunA17_Chr1g0193811 21.905 525 357 18 21 509 4 511 1.12e-14 76.6
Msa1336480 MtrunA17_Chr1g0163491 24.800 250 173 4 245 486 248 490 1.30e-14 76.6
Msa1336480 MtrunA17_Chr2g0280001 32.593 135 87 2 58 188 64 198 1.46e-14 73.2
Msa1336480 MtrunA17_Chr7g0227291 25.446 224 154 4 260 478 240 455 1.60e-14 76.3
Msa1336480 MtrunA17_Chr2g0313791 24.324 259 184 7 259 509 252 506 2.22e-14 75.9
Msa1336480 MtrunA17_Chr5g0403451 24.510 204 126 2 315 490 49 252 3.33e-14 73.2
Msa1336480 MtrunA17_Chr4g0044841 21.978 455 308 16 47 490 27 445 4.06e-14 74.7
Msa1336480 MtrunA17_Chr2g0313781 24.390 246 171 7 270 509 287 523 4.68e-14 74.7
Msa1336480 MtrunA17_Chr8g0362731 22.078 385 274 11 124 497 21 390 4.94e-14 73.9
Msa1336480 MtrunA17_Chr1g0183611 26.178 191 132 3 303 486 206 394 5.98e-14 73.9
Msa1336480 MtrunA17_Chr2g0313831 23.565 331 226 10 194 509 193 511 6.60e-14 74.3
Msa1336480 MtrunA17_Chr8g0348751 22.044 499 321 14 28 483 3 476 6.80e-14 74.3
Msa1336480 MtrunA17_Chr7g0227281 24.554 224 156 4 260 478 240 455 8.58e-14 73.9
Msa1336480 MtrunA17_Chr2g0280051 24.901 253 173 7 58 295 74 324 9.38e-14 72.4
Msa1336480 MtrunA17_Chr8g0364081 27.841 176 119 3 325 497 347 517 9.79e-14 73.9
Msa1336480 MtrunA17_Chr7g0262111 27.570 214 142 6 284 497 281 481 1.11e-13 73.6
Msa1336480 MtrunA17_Chr2g0313771 26.699 206 146 4 287 490 294 496 1.42e-13 73.2
Msa1336480 MtrunA17_Chr3g0104351 24.576 236 159 5 263 483 251 482 1.48e-13 73.2
Msa1336480 MtrunA17_Chr2g0313821 24.590 244 169 8 270 507 275 509 1.66e-13 72.8
Msa1336480 MtrunA17_Chr7g0235261 29.012 162 113 2 325 486 320 479 1.68e-13 72.8
Msa1336480 MtrunA17_Chr8g0372331 31.250 128 81 4 400 524 2 125 1.96e-13 67.4
Msa1336480 MtrunA17_Chr2g0307291 26.068 234 157 7 270 497 277 500 2.31e-13 72.4
Msa1336480 MtrunA17_Chr1g0176861 46.237 93 47 1 22 114 5 94 2.52e-13 65.9
Msa1336480 MtrunA17_Chr8g0354541 28.859 149 102 3 343 490 6 151 3.08e-13 68.2
Msa1336480 MtrunA17_Chr3g0135841 25.681 257 169 9 247 494 274 517 4.02e-13 71.6
Msa1336480 MtrunA17_Chr1g0163461 24.291 247 178 3 245 486 246 488 4.56e-13 71.6
Msa1336480 MtrunA17_Chr8g0354511 22.951 427 292 14 80 490 92 497 7.71e-13 70.9
Msa1336480 MtrunA17_Chr1g0163211 25.105 239 162 6 282 513 272 500 9.34e-13 70.5
Msa1336480 MtrunA17_Chr1g0163401 23.922 255 175 6 245 486 233 481 1.14e-12 70.5
Msa1336480 MtrunA17_Chr8g0387001 23.045 243 161 4 253 483 243 471 1.23e-12 70.1
Msa1336480 MtrunA17_Chr4g0067191 24.155 207 129 2 315 493 285 491 1.30e-12 70.1
Msa1336480 MtrunA17_Chr1g0163351 21.212 495 317 18 36 486 9 474 1.33e-12 70.1
Msa1336480 MtrunA17_Chr5g0400421 27.368 190 124 5 301 486 277 456 1.42e-12 70.1
Msa1336480 MtrunA17_Chr2g0321171 28.426 197 128 4 312 506 295 480 1.76e-12 69.7
Msa1336480 MtrunA17_Chr2g0288661 24.893 233 166 5 263 490 263 491 1.76e-12 69.7
Msa1336480 MtrunA17_Chr1g0178971 25.926 189 128 2 311 490 296 481 4.12e-12 68.6
Msa1336480 MtrunA17_Chr2g0307301 25.641 234 158 7 270 497 277 500 6.75e-12 67.8
Msa1336480 MtrunA17_Chr2g0313811 23.577 246 173 7 270 509 287 523 7.12e-12 67.8
Msa1336480 MtrunA17_Chr1g0171041 25.824 182 121 4 315 486 299 476 1.08e-11 67.4
Msa1336480 MtrunA17_Chr5g0443401 22.600 500 307 20 22 490 1 451 1.47e-11 66.6
Msa1336480 MtrunA17_Chr6g0478161 28.646 192 125 7 305 489 278 464 1.63e-11 66.6
Msa1336480 MtrunA17_Chr2g0313801 23.810 231 160 7 290 509 286 511 1.64e-11 66.6
Msa1336480 MtrunA17_Chr2g0308651 26.904 197 136 5 325 514 222 417 2.76e-11 65.5
Msa1336480 MtrunA17_Chr4g0056981 40.278 72 43 0 348 419 1 72 4.48e-11 58.9
Msa1336480 MtrunA17_Chr7g0255131 21.992 482 325 15 35 487 18 477 6.22e-11 64.7
Msa1336480 MtrunA17_Chr5g0403931 24.375 480 311 20 30 490 8 454 9.67e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336480 AT5G07990.1 39.293 509 291 8 26 523 2 503 3.31e-122 369
Msa1336480 AT3G48310.1 39.451 474 275 5 49 520 24 487 1.47e-120 363
Msa1336480 AT3G48320.1 38.990 495 290 5 28 520 3 487 8.16e-119 359
Msa1336480 AT3G26330.1 39.545 483 269 8 54 524 28 499 1.20e-118 359
Msa1336480 AT3G48270.1 37.449 494 297 5 29 520 3 486 1.88e-118 358
Msa1336480 AT3G48280.1 36.714 493 302 5 29 520 3 486 2.24e-117 355
Msa1336480 AT3G48290.1 38.994 477 281 4 45 520 21 488 3.43e-117 355
Msa1336480 AT3G26320.1 38.028 497 284 9 40 524 15 499 5.70e-117 355
Msa1336480 AT3G26310.1 37.425 497 294 8 34 522 9 496 3.06e-116 353
Msa1336480 AT3G48300.1 39.662 474 271 6 49 520 20 480 4.16e-115 349
Msa1336480 AT3G48300.2 39.662 474 271 6 49 520 22 482 4.42e-115 349
Msa1336480 AT5G57260.1 37.090 488 280 10 47 519 22 497 5.11e-114 347
Msa1336480 AT3G26300.1 36.364 506 306 8 27 524 2 499 2.34e-113 345
Msa1336480 AT3G26150.1 38.356 511 284 10 26 519 2 498 7.32e-113 344
Msa1336480 AT5G25120.1 36.970 495 300 7 30 519 3 490 1.59e-112 343
Msa1336480 AT3G48290.2 36.978 503 281 5 45 520 21 514 2.80e-111 340
Msa1336480 AT3G26160.1 37.402 508 293 9 26 519 2 498 1.85e-110 338
Msa1336480 AT3G26180.1 36.727 501 297 7 32 519 5 498 1.89e-110 338
Msa1336480 AT5G25140.1 35.556 495 307 6 30 519 3 490 2.89e-110 337
Msa1336480 AT5G25130.1 36.566 495 302 7 30 519 3 490 4.31e-110 337
Msa1336480 AT4G13310.1 38.333 480 280 8 49 520 24 495 8.02e-110 336
Msa1336480 AT4G36220.1 37.185 476 275 8 65 523 48 516 1.79e-109 336
Msa1336480 AT3G26170.1 36.364 506 301 8 26 519 2 498 1.11e-108 333
Msa1336480 AT2G24180.1 37.821 468 276 6 58 519 37 495 1.40e-108 333
Msa1336480 AT2G45560.1 36.310 504 296 9 32 519 10 504 7.07e-108 332
Msa1336480 AT2G30770.1 37.393 468 281 5 58 520 34 494 2.05e-107 330
Msa1336480 AT5G25180.1 36.089 496 305 7 29 519 2 490 2.89e-107 330
Msa1336480 AT2G45550.1 36.471 510 287 11 32 519 10 504 4.32e-107 330
Msa1336480 AT4G13770.1 37.067 491 289 9 40 519 15 496 1.35e-106 328
Msa1336480 AT3G26290.1 37.866 478 282 6 55 524 29 499 2.07e-106 327
Msa1336480 AT3G26290.2 37.866 478 282 6 55 524 42 512 2.47e-106 328
Msa1336480 AT3G26280.1 38.431 497 284 9 40 523 15 502 1.03e-105 326
Msa1336480 AT3G26280.2 38.431 497 284 9 40 523 32 519 1.50e-105 326
Msa1336480 AT4G13290.1 36.875 480 279 7 49 520 25 488 9.76e-105 323
Msa1336480 AT1G13080.1 36.884 507 302 9 27 522 2 501 1.73e-103 320
Msa1336480 AT1G11610.2 37.288 472 284 5 58 524 34 498 3.54e-103 319
Msa1336480 AT3G26270.1 38.174 482 279 8 49 519 24 497 4.72e-103 319
Msa1336480 AT1G11610.1 37.821 468 279 5 58 520 34 494 1.24e-102 318
Msa1336480 AT3G26210.1 37.687 467 279 7 64 522 38 500 2.52e-102 317
Msa1336480 AT2G02580.1 38.218 505 288 9 27 519 2 494 4.14e-102 317
Msa1336480 AT5G24950.1 35.684 468 290 5 58 520 33 494 4.77e-102 316
Msa1336480 AT1G13110.1 34.722 504 313 9 27 519 2 500 7.15e-102 316
Msa1336480 AT2G45570.1 36.759 506 292 10 32 519 10 505 1.02e-100 313
Msa1336480 AT5G42590.1 37.305 512 293 8 18 520 3 495 7.13e-100 310
Msa1336480 AT2G30750.1 38.843 484 280 7 43 520 21 494 7.61e-100 310
Msa1336480 AT4G31500.1 36.076 474 285 9 58 520 30 496 1.64e-99 310
Msa1336480 AT5G06900.1 36.596 470 275 9 58 519 35 489 1.70e-99 310
Msa1336480 AT3G26190.1 36.920 474 284 8 56 519 27 495 7.26e-99 308
Msa1336480 AT1G33720.1 34.375 512 295 9 32 519 10 504 1.09e-98 308
Msa1336480 AT5G04330.1 37.630 481 277 11 58 523 33 505 1.88e-98 307
Msa1336480 AT3G26200.1 36.842 475 285 8 56 520 27 496 2.90e-94 296
Msa1336480 AT1G01280.1 35.924 476 275 7 66 523 41 504 9.03e-94 295
Msa1336480 AT3G53280.1 35.381 472 294 7 56 520 27 494 2.23e-93 294
Msa1336480 AT3G61040.1 35.789 475 281 10 56 519 32 493 2.43e-93 294
Msa1336480 AT5G24960.1 38.723 470 273 7 58 520 34 495 5.05e-93 293
Msa1336480 AT4G31940.1 35.238 525 306 8 28 525 3 520 8.26e-93 293
Msa1336480 AT3G26230.1 37.177 503 289 12 33 519 3 494 7.05e-92 290
Msa1336480 AT5G44620.1 35.152 495 303 6 40 525 29 514 4.88e-90 286
Msa1336480 AT4G31970.1 34.476 525 311 8 28 526 3 520 9.67e-90 285
Msa1336480 AT3G44250.1 36.481 466 280 9 56 511 27 486 3.39e-89 283
Msa1336480 AT4G37430.1 33.268 511 297 14 29 518 1 488 4.05e-89 283
Msa1336480 AT2G42250.1 34.661 502 303 8 33 519 16 507 6.53e-89 283
Msa1336480 AT3G53300.1 35.158 475 293 8 56 520 27 496 1.31e-88 281
Msa1336480 AT1G13090.2 35.650 446 271 7 56 491 27 466 2.46e-88 280
Msa1336480 AT4G12320.1 33.333 504 310 8 34 526 26 514 7.66e-88 280
Msa1336480 AT4G12300.1 33.797 503 312 8 33 526 22 512 1.44e-87 279
Msa1336480 AT5G67310.1 33.199 497 303 14 30 517 18 494 2.00e-87 278
Msa1336480 AT4G22710.1 34.395 471 290 7 66 527 62 522 2.25e-87 279
Msa1336480 AT3G26220.1 37.500 504 289 11 32 519 4 497 2.42e-87 278
Msa1336480 AT4G37410.1 35.328 518 286 17 24 522 2 489 2.93e-87 278
Msa1336480 AT4G37320.1 35.088 513 287 15 28 522 4 488 4.61e-87 277
Msa1336480 AT4G22690.1 34.183 471 291 7 66 527 93 553 1.38e-86 278
Msa1336480 AT3G25180.1 33.719 519 317 11 22 524 1 508 6.58e-86 275
Msa1336480 AT5G57220.1 32.554 513 303 11 19 522 5 483 3.09e-85 272
Msa1336480 AT3G20940.1 34.400 500 296 12 39 522 26 509 1.97e-84 271
Msa1336480 AT2G14100.1 33.966 474 288 10 68 529 54 514 2.19e-84 271
Msa1336480 AT2G45580.1 34.542 469 280 10 67 519 48 505 5.91e-84 270
Msa1336480 AT4G37400.1 33.200 500 306 12 33 522 8 489 6.04e-84 269
Msa1336480 AT5G10610.1 32.600 500 311 11 30 519 4 487 9.00e-84 269
Msa1336480 AT4G12330.1 33.970 471 288 6 66 525 55 513 3.21e-83 268
Msa1336480 AT5G36220.1 34.113 513 293 14 29 522 8 494 1.18e-82 266
Msa1336480 AT4G15330.1 32.563 519 302 10 18 519 12 499 8.06e-82 264
Msa1336480 AT2G40890.1 30.595 487 313 8 51 523 21 496 8.13e-82 264
Msa1336480 AT3G20950.1 34.623 517 294 18 30 522 16 512 9.52e-82 264
Msa1336480 AT4G37330.1 34.563 515 293 17 22 522 1 485 1.87e-81 263
Msa1336480 AT4G37310.1 33.996 503 300 13 29 515 7 493 2.14e-81 263
Msa1336480 AT3G26830.1 32.996 494 302 11 27 505 2 481 2.38e-81 262
Msa1336480 AT3G32047.1 34.899 447 266 10 68 503 53 485 4.59e-81 262
Msa1336480 AT5G35715.1 32.574 439 281 8 92 520 1 434 4.69e-80 257
Msa1336480 AT4G37340.1 33.996 503 300 13 33 522 6 489 5.99e-80 259
Msa1336480 AT4G31950.1 34.417 523 297 10 28 523 3 506 1.34e-79 258
Msa1336480 AT5G06905.1 31.781 494 303 11 22 493 1 482 2.00e-79 258
Msa1336480 AT3G20140.1 34.211 494 300 12 39 522 26 504 2.31e-79 258
Msa1336480 AT1G50520.1 32.319 526 315 13 25 524 2 512 2.95e-79 258
Msa1336480 AT4G12310.1 33.404 473 294 7 66 526 53 516 3.49e-79 258
Msa1336480 AT4G15360.1 33.465 505 310 12 30 521 13 504 6.71e-79 257
Msa1336480 AT1G13100.1 33.563 435 273 8 67 491 38 466 1.29e-78 255
Msa1336480 AT4G37360.1 33.202 506 301 15 32 522 5 488 7.39e-78 253
Msa1336480 AT3G28740.1 35.934 487 279 13 48 522 32 497 2.13e-77 253
Msa1336480 AT1G50560.1 34.766 535 295 16 25 526 2 515 2.25e-77 253
Msa1336480 AT5G10600.1 31.028 506 310 10 24 518 25 502 7.10e-77 251
Msa1336480 AT4G37370.1 33.794 506 293 15 30 522 10 486 2.43e-76 249
Msa1336480 AT3G20120.4 32.976 467 289 9 68 522 52 506 2.90e-76 249
Msa1336480 AT4G13310.2 36.997 373 223 6 49 415 24 390 6.65e-76 245
Msa1336480 AT2G23190.1 34.029 479 272 13 31 489 48 502 1.30e-75 249
Msa1336480 AT3G20110.1 32.394 497 311 11 32 518 12 493 3.41e-74 244
Msa1336480 AT3G20090.2 33.068 502 309 11 19 506 4 492 3.58e-74 244
Msa1336480 AT3G61880.1 32.720 489 296 14 43 517 55 524 3.02e-73 242
Msa1336480 AT3G52970.1 32.422 512 306 14 34 519 13 510 9.72e-73 240
Msa1336480 AT3G20080.2 32.661 496 302 11 44 522 29 509 9.83e-73 241
Msa1336480 AT3G20080.1 32.661 496 302 11 44 522 29 509 9.83e-73 241
Msa1336480 AT3G61880.2 32.720 489 296 14 43 517 55 524 1.02e-72 241
Msa1336480 AT4G20240.1 35.075 402 248 6 52 448 28 421 1.52e-72 238
Msa1336480 AT2G25160.1 32.490 514 308 16 29 515 4 505 2.10e-72 240
Msa1336480 AT5G42580.1 30.843 522 315 11 19 524 4 495 8.29e-72 238
Msa1336480 AT1G74550.1 31.393 481 288 10 58 523 28 481 1.05e-71 237
Msa1336480 AT2G46660.1 31.599 519 314 17 20 517 25 523 1.17e-71 238
Msa1336480 AT3G52970.2 31.418 522 312 12 34 519 13 524 1.20e-71 238
Msa1336480 AT3G20130.1 32.500 480 298 9 48 514 33 499 3.02e-71 236
Msa1336480 AT4G15350.1 33.469 493 294 13 39 514 18 493 5.69e-71 236
Msa1336480 AT5G47990.1 31.857 474 285 12 68 522 53 507 1.75e-70 234
Msa1336480 AT4G15330.2 31.021 519 282 11 18 519 12 471 5.48e-70 232
Msa1336480 AT1G33720.4 33.596 381 230 6 152 519 2 372 7.71e-70 229
Msa1336480 AT1G33720.3 33.596 381 230 6 152 519 2 372 7.71e-70 229
Msa1336480 AT1G33720.5 33.596 381 230 6 152 519 2 372 7.71e-70 229
Msa1336480 AT3G20100.1 32.558 516 315 15 27 523 8 509 3.39e-69 231
Msa1336480 AT1G28430.1 31.712 514 299 15 20 507 3 490 1.41e-67 227
Msa1336480 AT2G23220.1 33.333 444 267 10 58 489 47 473 2.56e-67 226
Msa1336480 AT1G33730.1 33.871 372 223 8 159 517 5 366 3.51e-67 221
Msa1336480 AT1G33730.2 33.871 372 223 8 159 517 5 366 3.51e-67 221
Msa1336480 AT1G01190.1 31.250 464 270 15 59 500 75 511 8.59e-66 223
Msa1336480 AT1G01190.2 31.250 464 270 15 59 500 80 516 9.10e-66 223
Msa1336480 AT1G74540.1 30.233 473 294 9 50 507 20 471 4.18e-65 220
Msa1336480 AT2G27000.1 31.849 449 280 11 71 506 54 489 1.38e-64 219
Msa1336480 AT1G33720.2 31.750 400 237 8 152 519 2 397 3.36e-64 215
Msa1336480 AT3G20960.2 32.308 455 274 12 82 519 67 504 4.72e-64 218
Msa1336480 AT2G45580.2 34.078 358 212 8 175 519 5 351 2.49e-63 211
Msa1336480 AT5G09970.1 33.778 450 262 18 59 488 71 504 1.32e-61 211
Msa1336480 AT1G13080.2 32.782 363 227 8 171 522 27 383 2.96e-61 206
Msa1336480 AT1G74110.1 29.002 531 317 18 24 519 30 535 1.40e-60 209
Msa1336480 AT1G66540.1 33.586 396 224 12 141 522 5 375 3.76e-60 203
Msa1336480 AT4G20240.2 34.771 371 229 6 52 417 28 390 4.82e-60 203
Msa1336480 AT5G24960.2 37.602 367 214 7 58 417 34 392 9.40e-60 203
Msa1336480 AT3G26180.2 38.662 269 154 5 255 519 103 364 1.93e-59 201
Msa1336480 AT3G26180.2 45.946 111 60 0 30 140 3 113 1.88e-24 105
Msa1336480 AT3G20130.2 30.625 480 279 10 48 514 33 471 1.21e-58 202
Msa1336480 AT3G20120.2 32.984 382 233 8 152 522 1 370 1.27e-58 199
Msa1336480 AT3G20120.3 32.984 382 233 8 152 522 1 370 1.27e-58 199
Msa1336480 AT3G20120.1 32.984 382 233 8 152 522 1 370 1.27e-58 199
Msa1336480 AT5G05260.2 29.675 492 303 13 32 488 7 490 4.83e-58 202
Msa1336480 AT2G05180.1 33.176 425 256 11 35 442 13 426 7.05e-58 199
Msa1336480 AT1G58260.1 27.101 476 310 10 42 491 27 491 8.87e-58 201
Msa1336480 AT2G27010.1 30.621 467 267 15 71 517 50 479 1.11e-57 200
Msa1336480 AT4G15380.1 28.698 453 303 9 82 526 68 508 3.27e-57 199
Msa1336480 AT1G13710.1 31.788 453 261 19 59 488 55 482 3.70e-57 199
Msa1336480 AT1G79370.1 28.466 541 337 12 18 524 10 534 7.05e-56 196
Msa1336480 AT1G66540.2 36.391 327 180 10 202 522 12 316 1.17e-54 187
Msa1336480 AT5G05260.1 28.707 526 297 16 32 516 7 495 4.49e-54 190
Msa1336480 AT3G53290.1 30.260 423 259 9 107 520 8 403 8.34e-54 187
Msa1336480 AT3G61040.2 32.000 375 232 9 56 419 32 394 1.48e-53 186
Msa1336480 AT3G20960.1 32.048 415 248 12 122 519 4 401 3.45e-53 186
Msa1336480 AT2G22330.1 26.860 484 326 11 27 490 29 504 6.07e-52 186
Msa1336480 AT4G39950.1 28.041 485 320 12 27 491 28 503 7.11e-52 185
Msa1336480 AT2G22330.2 26.860 484 326 11 27 490 52 527 7.52e-52 186
Msa1336480 AT4G39950.2 28.041 485 320 12 27 491 68 543 8.03e-52 186
Msa1336480 AT1G16400.1 27.579 504 327 11 29 503 14 508 8.89e-52 185
Msa1336480 AT3G20090.1 32.153 367 224 9 152 506 1 354 7.68e-51 179
Msa1336480 AT5G36220.2 35.583 326 183 8 202 522 45 348 2.17e-50 177
Msa1336480 AT3G25180.2 31.525 387 242 9 22 392 1 380 2.79e-49 175
Msa1336480 AT1G16410.1 25.564 532 357 13 18 519 4 526 4.75e-49 177
Msa1336480 AT3G20080.4 31.266 387 235 10 152 522 1 372 2.81e-48 172
Msa1336480 AT3G20080.5 31.266 387 235 10 152 522 1 372 2.81e-48 172
Msa1336480 AT3G20080.6 31.266 387 235 10 152 522 1 372 2.81e-48 172
Msa1336480 AT3G20080.3 31.266 387 235 10 152 522 1 372 2.81e-48 172
Msa1336480 AT2G30490.1 28.538 431 292 8 68 487 44 469 5.04e-48 174
Msa1336480 AT3G10560.1 27.235 481 329 12 20 488 9 480 1.36e-46 170
Msa1336480 AT2G25160.2 30.576 399 246 12 29 404 4 394 1.34e-45 166
Msa1336480 AT3G20935.1 34.495 287 159 8 259 522 54 334 1.53e-44 160
Msa1336480 AT1G64940.1 27.364 497 299 17 58 518 34 504 6.50e-44 163
Msa1336480 AT1G11600.1 26.471 510 342 16 29 517 7 504 1.26e-43 162
Msa1336480 AT5G04630.1 26.891 476 321 12 28 488 13 476 9.55e-43 159
Msa1336480 AT5G35917.1 27.723 505 276 19 52 524 37 484 7.75e-41 154
Msa1336480 AT2G45580.3 30.081 369 230 11 64 415 45 402 6.52e-40 149
Msa1336480 AT3G03470.1 24.792 480 339 10 27 489 4 478 3.16e-39 150
Msa1336480 AT5G04660.1 25.882 425 283 10 82 488 69 479 2.39e-38 147
Msa1336480 AT1G64950.1 25.826 484 323 13 58 518 33 503 2.86e-38 147
Msa1336480 AT2G12190.1 26.122 490 324 14 58 522 33 509 4.22e-38 147
Msa1336480 AT3G10570.1 26.636 428 291 11 74 488 63 480 6.50e-37 143
Msa1336480 AT2G45560.2 31.655 278 174 6 32 293 10 287 2.63e-36 137
Msa1336480 AT1G64930.1 25.306 490 319 14 58 518 33 504 3.01e-36 141
Msa1336480 AT4G20235.1 33.333 276 150 8 29 293 2 254 3.69e-35 135
Msa1336480 AT4G20235.1 46.053 76 41 0 415 490 255 330 3.77e-17 83.2
Msa1336480 AT5G25900.1 24.580 476 326 10 59 518 45 503 3.38e-34 135
Msa1336480 AT2G45560.3 32.035 231 147 4 32 252 10 240 7.82e-33 125
Msa1336480 AT1G16410.2 25.679 405 270 9 29 409 16 413 1.12e-32 130
Msa1336480 AT1G13090.1 41.509 159 93 0 56 214 27 185 4.00e-31 122
Msa1336480 AT5G61320.1 24.946 461 296 14 81 522 58 487 2.09e-30 124
Msa1336480 AT1G64900.1 25.052 483 313 15 64 518 38 499 2.42e-27 115
Msa1336480 AT3G53305.1 38.415 164 87 3 357 520 176 325 2.83e-27 112
Msa1336480 AT3G53305.1 28.643 199 125 6 92 275 1 197 9.72e-16 79.0
Msa1336480 AT2G45510.1 24.762 525 335 17 26 519 12 507 2.60e-24 106
Msa1336480 AT3G56630.1 25.214 468 300 16 54 491 24 471 2.55e-22 100
Msa1336480 AT2G44890.1 23.352 531 350 15 19 519 4 507 5.43e-22 99.8
Msa1336480 AT5G52320.2 26.400 250 167 7 245 487 233 472 1.88e-21 97.8
Msa1336480 AT5G52320.1 26.400 250 167 7 245 487 233 472 1.98e-21 97.8
Msa1336480 AT1G31800.1 24.348 460 300 13 88 520 139 577 2.48e-21 98.2
Msa1336480 AT1G65340.1 27.755 245 159 8 253 487 237 473 5.94e-21 96.7
Msa1336480 AT5G24900.2 23.907 389 252 12 146 509 36 405 1.55e-20 94.4
Msa1336480 AT1G34540.1 24.948 485 303 20 60 507 30 490 1.79e-20 95.1
Msa1336480 AT5G24900.1 23.907 389 252 12 146 509 153 522 2.42e-20 94.7
Msa1336480 AT1G57750.1 27.528 178 122 2 314 490 298 469 2.61e-20 94.4
Msa1336480 AT1G19630.1 30.802 237 141 8 267 497 235 454 7.30e-20 92.8
Msa1336480 AT2G32440.2 24.892 462 289 19 55 498 42 463 1.16e-19 92.4
Msa1336480 AT2G32440.1 24.892 462 289 19 55 498 42 463 1.16e-19 92.4
Msa1336480 AT3G26125.1 25.301 249 166 4 252 483 253 498 1.68e-19 92.0
Msa1336480 AT5G45340.1 24.009 454 283 18 58 498 37 441 3.36e-19 90.9
Msa1336480 AT3G48520.1 23.313 489 322 13 29 487 4 469 5.36e-19 90.5
Msa1336480 AT2G44890.2 22.391 527 342 15 19 519 4 489 9.51e-19 89.7
Msa1336480 AT1G13140.1 25.794 252 168 6 246 483 244 490 1.80e-18 89.0
Msa1336480 AT5G63450.1 23.926 489 312 15 33 486 8 471 2.36e-18 88.6
Msa1336480 AT1G19630.3 31.858 226 128 8 267 486 235 440 2.46e-18 88.2
Msa1336480 AT1G13150.1 25.103 243 163 6 289 512 276 518 3.67e-18 88.2
Msa1336480 AT5G63450.2 23.926 489 312 15 33 486 66 529 3.99e-18 88.2
Msa1336480 AT2G21910.1 23.200 250 181 4 245 487 231 476 6.48e-18 87.0
Msa1336480 AT2G29090.2 22.976 457 308 16 42 490 36 456 7.58e-18 86.7
Msa1336480 AT2G29090.1 22.976 457 308 16 42 490 36 456 7.58e-18 86.7
Msa1336480 AT5G45340.2 24.146 439 274 17 58 483 37 429 7.66e-18 86.7
Msa1336480 AT5G02900.1 27.624 181 127 3 311 487 268 448 1.18e-17 86.3
Msa1336480 AT5G24910.1 26.523 279 183 7 248 509 254 527 1.18e-17 86.3
Msa1336480 AT1G13140.2 24.771 218 150 3 276 483 251 464 1.60e-17 85.9
Msa1336480 AT3G53130.1 31.638 177 117 4 319 493 341 515 2.14e-17 85.5
Msa1336480 AT1G24540.1 25.592 211 143 4 284 483 279 486 3.60e-17 84.7
Msa1336480 AT5G52400.1 29.255 188 128 4 325 509 329 514 4.99e-17 84.3
Msa1336480 AT4G39500.1 26.404 178 130 1 311 487 259 436 9.95e-17 83.2
Msa1336480 AT4G39500.2 26.404 178 130 1 311 487 309 486 1.11e-16 83.2
Msa1336480 AT2G46960.2 23.276 464 293 17 76 509 82 512 2.14e-16 82.4
Msa1336480 AT3G14620.1 23.810 294 201 10 221 506 229 507 2.37e-16 82.4
Msa1336480 AT2G26710.1 23.585 318 228 7 186 497 189 497 2.68e-16 82.0
Msa1336480 AT2G46950.1 23.864 440 281 15 76 493 139 546 3.70e-16 82.0
Msa1336480 AT4G39490.1 22.605 261 182 4 246 490 233 489 4.47e-16 81.6
Msa1336480 AT4G39510.1 27.222 180 127 3 311 487 297 475 5.07e-16 81.3
Msa1336480 AT2G23180.1 23.118 186 130 3 311 487 301 482 9.00e-16 80.5
Msa1336480 AT1G47620.1 23.016 252 179 5 245 487 240 485 9.19e-16 80.5
Msa1336480 AT1G19630.2 23.990 396 262 14 58 441 36 404 1.44e-15 79.3
Msa1336480 AT5G23190.1 22.951 244 173 3 253 484 267 507 5.08e-15 78.2
Msa1336480 AT5G35920.1 29.412 153 92 4 379 524 6 149 7.29e-15 72.8
Msa1336480 AT1G57750.2 29.457 129 85 1 314 442 298 420 1.01e-14 77.0
Msa1336480 AT4G39480.1 24.211 190 131 3 311 487 294 483 1.16e-14 77.0
Msa1336480 AT4G32170.1 22.672 247 183 4 245 487 231 473 1.37e-14 76.6
Msa1336480 AT5G08250.1 22.857 245 173 3 253 484 202 443 1.49e-14 76.6
Msa1336480 AT5G08250.2 22.857 245 173 3 253 484 264 505 1.52e-14 76.6
Msa1336480 AT2G46960.1 24.706 255 179 6 260 509 150 396 4.56e-14 74.7
Msa1336480 AT1G01600.1 24.615 260 160 7 245 483 235 479 5.31e-14 75.1
Msa1336480 AT4G00360.1 25.490 255 162 6 245 483 235 477 6.10e-14 74.7
Msa1336480 AT5G38450.1 22.645 499 337 17 28 490 4 489 6.93e-14 74.7
Msa1336480 AT1G63710.1 21.552 464 305 14 60 483 29 473 7.01e-14 74.7
Msa1336480 AT2G26170.1 28.049 246 154 10 258 491 265 499 1.21e-13 73.9
Msa1336480 AT5G58860.1 26.050 238 145 8 290 509 271 495 2.25e-13 72.8
Msa1336480 AT3G14610.1 22.868 258 190 5 259 515 258 507 3.68e-13 72.4
Msa1336480 AT2G45970.1 21.807 509 315 16 20 483 6 476 4.79e-13 72.0
Msa1336480 AT2G29090.3 26.404 178 116 5 319 490 193 361 9.15e-13 70.5
Msa1336480 AT5G14400.1 25.540 278 158 11 226 496 108 343 1.03e-12 70.1
Msa1336480 AT1G67110.1 29.927 137 92 2 354 490 351 483 1.18e-12 70.9
Msa1336480 AT5G14400.2 25.540 278 158 11 226 496 162 397 1.18e-12 70.5
Msa1336480 AT1G75130.1 28.324 173 115 3 325 497 316 479 3.29e-12 69.3
Msa1336480 AT3G61035.1 28.413 271 161 12 66 323 51 301 7.25e-12 67.0
Msa1336480 AT1G55940.2 23.874 222 153 7 274 490 257 467 8.71e-12 67.8
Msa1336480 AT4G27710.1 25.397 189 135 4 325 509 326 512 9.36e-12 67.8
Msa1336480 AT3G44970.1 21.806 454 310 14 54 493 32 454 1.74e-11 67.0
Msa1336480 AT2G42850.1 26.178 191 128 7 306 492 278 459 2.59e-11 66.2
Msa1336480 AT1G69500.1 23.318 223 144 3 295 490 274 496 2.86e-11 66.2
Msa1336480 AT1G55940.1 23.853 218 150 7 274 486 257 463 5.54e-11 65.5

Find 98 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTTAAAGAAGGCTTCTT+TGG 0.236282 tig0001216:-6566 Msa1336480:CDS
AACTTCATCAAGAGCTTTAC+TGG 0.246765 tig0001216:+5410 Msa1336480:intergenic
TTTCTGAGTATGGTCCTTAT+TGG 0.249980 tig0001216:-6687 Msa1336480:CDS
ATGAATATGGAGGAGAAATT+TGG 0.257803 tig0001216:-4697 Msa1336480:CDS
ATGTGAAGGTTTCCTATTAT+TGG 0.265282 tig0001216:+6919 Msa1336480:intergenic
GTAAGAAAAGTTTGAATAAA+AGG 0.272579 tig0001216:+6995 Msa1336480:intergenic
TAAAGCTCTTGATGAAGTTT+TGG 0.274595 tig0001216:-5406 Msa1336480:CDS
TTGTTCAACAAGTTTATTAC+TGG 0.281873 tig0001216:-4576 Msa1336480:three_prime_UTR
TATTGTGTATAAGATGATAT+TGG 0.281876 tig0001216:-6494 Msa1336480:CDS
AAAAGAGGAGTTGGGTGTTT+TGG 0.283920 tig0001216:-6593 Msa1336480:CDS
ATAGGAAACCTTCACATATT+AGG 0.294944 tig0001216:-6913 Msa1336480:CDS
GAACATACTAGTATTATTCT+TGG 0.305198 tig0001216:+4599 Msa1336480:intergenic
TTTCTCCTCCATATTCATAT+TGG 0.305282 tig0001216:+4702 Msa1336480:intergenic
GAAGATGAAATAACAATTGT+TGG 0.315561 tig0001216:+6814 Msa1336480:intergenic
TAAGGACCATACTCAGAAAA+AGG 0.320305 tig0001216:+6691 Msa1336480:intergenic
ACTGGTAAAGATGCTAATTA+TGG 0.332415 tig0001216:-4558 Msa1336480:three_prime_UTR
CCACCAACACTACCAATAAT+AGG 0.337454 tig0001216:-6931 Msa1336480:CDS
TTCCTCATATTGCGCCAATA+AGG 0.338854 tig0001216:+6673 Msa1336480:intergenic
GAATCTATACCATTTGGTTC+TGG 0.339971 tig0001216:-4832 Msa1336480:CDS
CGCAATACCAAGTTATCGTT+TGG 0.343963 tig0001216:-4644 Msa1336480:CDS
AGTGTGTCTACAAAATCTTT+AGG 0.365111 tig0001216:+5339 Msa1336480:intergenic
AATTCAATTGGGTTTGATTA+CGG 0.365134 tig0001216:-4791 Msa1336480:CDS
ATAGTAAATGCATGGGCAAT+TGG 0.368663 tig0001216:-4946 Msa1336480:CDS
TAGTCCTTCCAATATGAATA+TGG 0.370369 tig0001216:-4710 Msa1336480:CDS
ATCTGGCTGATTATGTTCCT+TGG 0.375889 tig0001216:-6399 Msa1336480:CDS
CCTATTATTGGTAGTGTTGG+TGG 0.380258 tig0001216:+6931 Msa1336480:intergenic
TGAAGAATTTGCATCACTCT+TGG 0.381747 tig0001216:+5159 Msa1336480:intergenic
GACATGACTACAATGAATCT+TGG 0.388696 tig0001216:+7066 Msa1336480:intergenic
TAAAGATGGATTAACTTTGA+TGG 0.393672 tig0001216:-6431 Msa1336480:CDS
GACTACAATGAATCTTGGTT+TGG 0.394680 tig0001216:+7071 Msa1336480:intergenic
AAAGTTGGTTATAGCTCAAT+TGG 0.405276 tig0001216:-4767 Msa1336480:CDS
ATCAAACCCAATTGAATTCC+AGG 0.407256 tig0001216:+4796 Msa1336480:intergenic
GCTAGCCGACCGAAGATTCA+AGG 0.409468 tig0001216:-6748 Msa1336480:CDS
ACGTTGTCCTGGAATTCAAT+TGG 0.412166 tig0001216:-4803 Msa1336480:CDS
CTCATGTCCTATGGTTCTAA+AGG 0.414064 tig0001216:-6718 Msa1336480:CDS
CGTTGTCCTGGAATTCAATT+GGG 0.419416 tig0001216:-4802 Msa1336480:CDS
CACCCTCAACATCAATGGTT+TGG 0.420424 tig0001216:+5301 Msa1336480:intergenic
ATTGTGTATAAGATGATATT+GGG 0.423232 tig0001216:-6493 Msa1336480:CDS
CATTCACGAGGGATTAATAA+AGG 0.423918 tig0001216:+5021 Msa1336480:intergenic
GGGATTAATAAAGGTGCAAC+AGG 0.434870 tig0001216:+5030 Msa1336480:intergenic
AGAGAGAACATAACAGTTGA+TGG 0.436144 tig0001216:-4997 Msa1336480:CDS
TGCAACAGGATAAAGTCTTA+AGG 0.439448 tig0001216:+5044 Msa1336480:intergenic
TTTCCTATTATTGGTAGTGT+TGG 0.443629 tig0001216:+6928 Msa1336480:intergenic
TTGGAAGGACTAATATCATA+TGG 0.449037 tig0001216:+4721 Msa1336480:intergenic
GTCCTTATTGGCGCAATATG+AGG 0.450862 tig0001216:-6675 Msa1336480:CDS
GAGTTTGAATCTATACCATT+TGG 0.451606 tig0001216:-4838 Msa1336480:CDS
AAAGATGGATTAACTTTGAT+GGG 0.452904 tig0001216:-6430 Msa1336480:CDS
TTGGGAGAGATCCTAATGTT+TGG 0.455276 tig0001216:-4927 Msa1336480:CDS
TTGTTCACCCTCAACATCAA+TGG 0.455670 tig0001216:+5296 Msa1336480:intergenic
GGGTTTGATTACGGTAAAGT+TGG 0.455869 tig0001216:-4782 Msa1336480:CDS
TGGAACTTGACCAAGTTGTA+AGG 0.460252 tig0001216:+6834 Msa1336480:intergenic
GCTGATTATGTTCCTTGGCT+AGG 0.460829 tig0001216:-6394 Msa1336480:CDS
AGGTCAGATCCTTGAATCTT+CGG 0.461576 tig0001216:+6739 Msa1336480:intergenic
TTGAAGAAGATGATTAAAGA+TGG 0.465198 tig0001216:-6445 Msa1336480:CDS
TTTCATCAACCACCATATCT+AGG 0.465783 tig0001216:+5067 Msa1336480:intergenic
TAGTAAATGCATGGGCAATT+GGG 0.467536 tig0001216:-4945 Msa1336480:CDS
TTTGGTTAACACTTTAAAGA+AGG 0.471222 tig0001216:-6575 Msa1336480:CDS
ATTGGTAGTGTTGGTGGACC+TGG 0.480313 tig0001216:+6937 Msa1336480:intergenic
TCATGTCCTATGGTTCTAAA+GGG 0.483367 tig0001216:-6717 Msa1336480:CDS
GGTATATGAAAGTGAAGAGA+AGG 0.497337 tig0001216:+7016 Msa1336480:intergenic
GCATCATCCAAACGATAACT+TGG 0.506133 tig0001216:+4637 Msa1336480:intergenic
TTAAAGAAGGCTTCTTTGGT+AGG 0.510215 tig0001216:-6562 Msa1336480:CDS
TGTATAAGATGATATTGGGT+AGG 0.511451 tig0001216:-6489 Msa1336480:CDS
TCCTCCATATTCATATTGGA+AGG 0.511635 tig0001216:+4706 Msa1336480:intergenic
GGATCTGACCTCATGTCCTA+TGG 0.513702 tig0001216:-6727 Msa1336480:CDS
TGCTTCAAAAGTTGAGAAGT+CGG 0.516946 tig0001216:-6626 Msa1336480:CDS
AGGCATCCCTTTAGAACCAT+AGG 0.524486 tig0001216:+6711 Msa1336480:intergenic
TCTGGTCGTAGACGTTGTCC+TGG 0.524631 tig0001216:-4814 Msa1336480:CDS
GTGGAAATACAAAATGAAGT+AGG 0.525470 tig0001216:-5135 Msa1336480:CDS
CACGAGTTATAGTAAATGCA+TGG 0.526633 tig0001216:-4954 Msa1336480:CDS
GAAGGCTTCTTTGGTAGGTG+AGG 0.532135 tig0001216:-6557 Msa1336480:CDS
GTAAAGATGCTAATTATGGC+AGG 0.535072 tig0001216:-4554 Msa1336480:three_prime_UTR
GTATAAGATGATATTGGGTA+GGG 0.536852 tig0001216:-6488 Msa1336480:CDS
GCGTGCAAATGCTGAGCTCT+TGG 0.539692 tig0001216:+4664 Msa1336480:intergenic
GGCTAGCGAAAACGATGTCA+TGG 0.543133 tig0001216:+6764 Msa1336480:intergenic
TGAAGTAGGAAATAAGAGAA+TGG 0.545698 tig0001216:-5121 Msa1336480:CDS
CGTCTACGACCAGAACCAAA+TGG 0.545982 tig0001216:+4823 Msa1336480:intergenic
AGTGATGCAAATTCTTCAAG+TGG 0.546597 tig0001216:-5154 Msa1336480:CDS
GCTTCAAAAGTTGAGAAGTC+GGG 0.547195 tig0001216:-6625 Msa1336480:CDS
CACCAAACCATTGATGTTGA+GGG 0.552119 tig0001216:-5303 Msa1336480:CDS
GCAATCATGTCCTTACAACT+TGG 0.554771 tig0001216:-6844 Msa1336480:CDS
GAAGTTTACCTAATATGTGA+AGG 0.559165 tig0001216:+6905 Msa1336480:intergenic
CATCTGCAAACGTGATTGAG+TGG 0.561234 tig0001216:-5206 Msa1336480:CDS
TATTATGAGACCAACATGCA+TGG 0.591099 tig0001216:-7126 Msa1336480:exon
CATTGATCGAACGATCATCA+AGG 0.595618 tig0001216:-5265 Msa1336480:CDS
ATCAAGAACTCCATGCATGT+TGG 0.604745 tig0001216:+7116 Msa1336480:intergenic
AGTGATTGAAGTGTTCTATG+TGG 0.604927 tig0001216:+6883 Msa1336480:intergenic
GCACCAAACCATTGATGTTG+AGG 0.605556 tig0001216:-5304 Msa1336480:CDS
ATCTGCAAACGTGATTGAGT+GGG 0.610348 tig0001216:-5205 Msa1336480:CDS
CAGATCCTTGAATCTTCGGT+CGG 0.611068 tig0001216:+6743 Msa1336480:intergenic
TATAAGATGATATTGGGTAG+GGG 0.617140 tig0001216:-6487 Msa1336480:CDS
ACGAGTTATAGTAAATGCAT+GGG 0.627891 tig0001216:-4953 Msa1336480:CDS
CTTTAGAACCATAGGACATG+AGG 0.628973 tig0001216:+6719 Msa1336480:intergenic
GCTAGCGAAAACGATGTCAT+GGG 0.634027 tig0001216:+6765 Msa1336480:intergenic
GGTAGTGTTGGTGGACCTGG+TGG 0.649633 tig0001216:+6940 Msa1336480:intergenic
ATGTTCTCTCTACATTCACG+AGG 0.651323 tig0001216:+5009 Msa1336480:intergenic
TCCTTCCAATATGAATATGG+AGG 0.654239 tig0001216:-4707 Msa1336480:CDS
TGTTCTCTCTACATTCACGA+GGG 0.669191 tig0001216:+5010 Msa1336470:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAACTACTATATAT+GGG + tig0001216:6152-6171 Msa1336480:intergenic 10.0%
!! TTATAATAAACTACTATATA+TGG + tig0001216:6153-6172 Msa1336480:intergenic 10.0%
!! ATGTATATTGAAATTTGAAA+TGG + tig0001216:5415-5434 Msa1336480:intergenic 15.0%
!! AAAAATATGCAACATAAATA+GGG + tig0001216:5463-5482 Msa1336480:intergenic 15.0%
!! TAATTAATTCTCTTTCATAA+AGG - tig0001216:5516-5535 Msa1336480:intron 15.0%
!! AATATTTAATAGTTCGATAT+TGG - tig0001216:5768-5787 Msa1336480:intron 15.0%
!! TTCATATATATAAAAGTGAA+GGG + tig0001216:5852-5871 Msa1336480:intergenic 15.0%
!! TTTCATATATATAAAAGTGA+AGG + tig0001216:5853-5872 Msa1336480:intergenic 15.0%
!!! CACTTTTATATATATGAAAT+TGG - tig0001216:5854-5873 Msa1336480:intron 15.0%
!!! TCACAATATCAAAATATTTT+AGG - tig0001216:5892-5911 Msa1336480:intron 15.0%
!! ATAATAAACTACTATATATG+GGG + tig0001216:6151-6170 Msa1336480:intergenic 15.0%
!! ATAGTAGTTTATTATAAATG+TGG - tig0001216:6156-6175 Msa1336480:intron 15.0%
!! TAGTAGTTTATTATAAATGT+GGG - tig0001216:6157-6176 Msa1336480:intron 15.0%
!!! TTATATGTTAACTTTTTGTT+AGG - tig0001216:6220-6239 Msa1336480:intron 15.0%
!!! TATATGTTAACTTTTTGTTA+GGG - tig0001216:6221-6240 Msa1336480:intron 15.0%
!! GTAAGAAAAGTTTGAATAAA+AGG + tig0001216:4685-4704 Msa1336480:intergenic 20.0%
!! TATTGTGTATAAGATGATAT+TGG - tig0001216:5183-5202 Msa1336480:CDS 20.0%
!! ATTGTGTATAAGATGATATT+GGG - tig0001216:5184-5203 Msa1336480:CDS 20.0%
!!! TACATTAACTATTTCTTTAC+CGG - tig0001216:5430-5449 Msa1336480:CDS 20.0%
!! GAAAAATATGCAACATAAAT+AGG + tig0001216:5464-5483 Msa1336480:intergenic 20.0%
!! ATATATATGAAATTGGAAAG+TGG - tig0001216:5861-5880 Msa1336480:intron 20.0%
!! TATATATGAAATTGGAAAGT+GGG - tig0001216:5862-5881 Msa1336480:intron 20.0%
!! AAATGAAATATTTAACCGAA+TGG + tig0001216:6028-6047 Msa1336480:intergenic 20.0%
!! GTAAAAACATAAGTAAATTG+AGG + tig0001216:6062-6081 Msa1336480:intergenic 20.0%
!!! GAATTTTAATTACCTAGATA+TGG - tig0001216:6598-6617 Msa1336480:CDS 20.0%
!! GAGAAAAAAATGAATTATCT+CGG - tig0001216:6812-6831 Msa1336480:CDS 20.0%
!!! TGGTTAATGGTTTTTTGTTT+TGG + tig0001216:4710-4729 Msa1336480:intergenic 25.0%
! GAAGATGAAATAACAATTGT+TGG + tig0001216:4866-4885 Msa1336480:intergenic 25.0%
!! TTTGGTTAACACTTTAAAGA+AGG - tig0001216:5102-5121 Msa1336480:CDS 25.0%
! TTGAAGAAGATGATTAAAGA+TGG - tig0001216:5232-5251 Msa1336480:CDS 25.0%
!!! TAAAGATGGATTAACTTTGA+TGG - tig0001216:5246-5265 Msa1336480:CDS 25.0%
!!! AAAGATGGATTAACTTTGAT+GGG - tig0001216:5247-5266 Msa1336480:CDS 25.0%
!!! AATGGTCTTATTATTAACGA+CGG + tig0001216:5359-5378 Msa1336480:intergenic 25.0%
!! TAAGAAGAAAAAGCACAAAA+TGG + tig0001216:5377-5396 Msa1336480:intergenic 25.0%
!! TAACCTTTTTGTGAAAAACA+CGG + tig0001216:5584-5603 Msa1336480:intergenic 25.0%
! TCACAAAAAGGTTATGATTA+AGG - tig0001216:5590-5609 Msa1336480:intron 25.0%
! AAAAAGGTTATGATTAAGGA+CGG - tig0001216:5594-5613 Msa1336480:intron 25.0%
! TGGTCACTCAATATTTAATA+TGG - tig0001216:5739-5758 Msa1336480:intron 25.0%
! TAATCACTTTACTATACACA+AGG - tig0001216:5949-5968 Msa1336480:intron 25.0%
! AATCACTTTACTATACACAA+GGG - tig0001216:5950-5969 Msa1336480:intron 25.0%
!! ACTCTTGAATATTTTCCATT+CGG - tig0001216:6010-6029 Msa1336480:intron 25.0%
! TAAGTAAATTGAGGATGAAA+TGG + tig0001216:6053-6072 Msa1336480:intergenic 25.0%
! TATAGTTAATCCTACTCAAT+CGG + tig0001216:6116-6135 Msa1336480:intergenic 25.0%
!!! TTTTAATTACCTAGATATGG+TGG - tig0001216:6601-6620 Msa1336480:CDS 25.0%
!! TTTTCTCAATAAATCTCTCT+GGG + tig0001216:6799-6818 Msa1336480:intergenic 25.0%
!! TTTTTCTCAATAAATCTCTC+TGG + tig0001216:6800-6819 Msa1336480:intergenic 25.0%
! AATTCAATTGGGTTTGATTA+CGG - tig0001216:6886-6905 Msa1336480:CDS 25.0%
! GAACATACTAGTATTATTCT+TGG + tig0001216:7081-7100 Msa1336480:intergenic 25.0%
! TTGTTCAACAAGTTTATTAC+TGG - tig0001216:7101-7120 Msa1336480:CDS 25.0%
!! TTTCCTATTATTGGTAGTGT+TGG + tig0001216:4752-4771 Msa1336480:intergenic 30.0%
ATGTGAAGGTTTCCTATTAT+TGG + tig0001216:4761-4780 Msa1336480:intergenic 30.0%
ATAGGAAACCTTCACATATT+AGG - tig0001216:4764-4783 Msa1336480:CDS 30.0%
GAAGTTTACCTAATATGTGA+AGG + tig0001216:4775-4794 Msa1336480:intergenic 30.0%
CAATCACTCTCCAAAAAATA+TGG - tig0001216:4809-4828 Msa1336480:CDS 30.0%
!!! CATGATTGCACCATATTTTT+TGG + tig0001216:4822-4841 Msa1336480:intergenic 30.0%
!! TCATTTTAGAAAAGAGGAGT+TGG - tig0001216:5075-5094 Msa1336480:CDS 30.0%
!! CATTTTAGAAAAGAGGAGTT+GGG - tig0001216:5076-5095 Msa1336480:CDS 30.0%
TGTATAAGATGATATTGGGT+AGG - tig0001216:5188-5207 Msa1336480:CDS 30.0%
GTATAAGATGATATTGGGTA+GGG - tig0001216:5189-5208 Msa1336480:CDS 30.0%
TATAAGATGATATTGGGTAG+GGG - tig0001216:5190-5209 Msa1336480:CDS 30.0%
ACATAAATAGGGATATACAC+CGG + tig0001216:5452-5471 Msa1336480:intergenic 30.0%
! TTTCCGTGTTTTTCACAAAA+AGG - tig0001216:5578-5597 Msa1336480:intron 30.0%
! ATAGAGTGATTGAGTGATTT+TGG - tig0001216:5719-5738 Msa1336480:intron 30.0%
! TAAAGCTCTTGATGAAGTTT+TGG - tig0001216:6271-6290 Msa1336480:intron 30.0%
AGTGTGTCTACAAAATCTTT+AGG + tig0001216:6341-6360 Msa1336480:intergenic 30.0%
GTGGAAATACAAAATGAAGT+AGG - tig0001216:6542-6561 Msa1336480:CDS 30.0%
TGAAGTAGGAAATAAGAGAA+TGG - tig0001216:6556-6575 Msa1336480:CDS 30.0%
ACGAGTTATAGTAAATGCAT+GGG - tig0001216:6724-6743 Msa1336480:CDS 30.0%
GAGTTTGAATCTATACCATT+TGG - tig0001216:6839-6858 Msa1336480:CDS 30.0%
! AAAGTTGGTTATAGCTCAAT+TGG - tig0001216:6910-6929 Msa1336480:CDS 30.0%
TTGGAAGGACTAATATCATA+TGG + tig0001216:6959-6978 Msa1336480:intergenic 30.0%
TAGTCCTTCCAATATGAATA+TGG - tig0001216:6967-6986 Msa1336480:CDS 30.0%
TTTCTCCTCCATATTCATAT+TGG + tig0001216:6978-6997 Msa1336480:intergenic 30.0%
ATGAATATGGAGGAGAAATT+TGG - tig0001216:6980-6999 Msa1336480:CDS 30.0%
ACTGGTAAAGATGCTAATTA+TGG - tig0001216:7119-7138 Msa1336480:exon 30.0%
TATTATGAGACCAACATGCA+TGG - tig0001216:4551-4570 Msa1336480:three_prime_UTR 35.0%
GACTACAATGAATCTTGGTT+TGG + tig0001216:4609-4628 Msa1336480:intergenic 35.0%
GACATGACTACAATGAATCT+TGG + tig0001216:4614-4633 Msa1336480:intergenic 35.0%
GGTATATGAAAGTGAAGAGA+AGG + tig0001216:4664-4683 Msa1336480:intergenic 35.0%
! TGGTGGCTTTTTATGGTTAA+TGG + tig0001216:4723-4742 Msa1336480:intergenic 35.0%
ATTAACCATAAAAAGCCACC+AGG - tig0001216:4722-4741 Msa1336480:CDS 35.0%
! AGTGATTGAAGTGTTCTATG+TGG + tig0001216:4797-4816 Msa1336480:intergenic 35.0%
!! TCATGTCCTATGGTTCTAAA+GGG - tig0001216:4960-4979 Msa1336480:CDS 35.0%
TAAGGACCATACTCAGAAAA+AGG + tig0001216:4989-5008 Msa1336480:intergenic 35.0%
TTTCTGAGTATGGTCCTTAT+TGG - tig0001216:4990-5009 Msa1336480:CDS 35.0%
TGCTTCAAAAGTTGAGAAGT+CGG - tig0001216:5051-5070 Msa1336480:CDS 35.0%
! CACTTTAAAGAAGGCTTCTT+TGG - tig0001216:5111-5130 Msa1336480:CDS 35.0%
TTAAAGAAGGCTTCTTTGGT+AGG - tig0001216:5115-5134 Msa1336480:CDS 35.0%
! TTTGATGGGAGCTTTTAATC+TGG - tig0001216:5261-5280 Msa1336480:CDS 35.0%
GTACAAATGTATGTACCTGA+AGG + tig0001216:5318-5337 Msa1336480:intergenic 35.0%
CATAGAGGGAAAAACACAAA+GGG + tig0001216:5795-5814 Msa1336480:intergenic 35.0%
TTTCCCTCTATGGCATTAAA+AGG - tig0001216:5803-5822 Msa1336480:intron 35.0%
TTCCCTCTATGGCATTAAAA+GGG - tig0001216:5804-5823 Msa1336480:intron 35.0%
! AACCCTTTTAATGCCATAGA+GGG + tig0001216:5809-5828 Msa1336480:intergenic 35.0%
! TAACCCTTTTAATGCCATAG+AGG + tig0001216:5810-5829 Msa1336480:intergenic 35.0%
AACTTCATCAAGAGCTTTAC+TGG + tig0001216:6270-6289 Msa1336480:intergenic 35.0%
! CTATTTTGCTCGACATGATA+GGG - tig0001216:6435-6454 Msa1336480:CDS 35.0%
! TATTTTGCTCGACATGATAG+GGG - tig0001216:6436-6455 Msa1336480:CDS 35.0%
!! GGGCTTTATCTGAACTTTTA+AGG - tig0001216:6492-6511 Msa1336480:CDS 35.0%
TGAAGAATTTGCATCACTCT+TGG + tig0001216:6521-6540 Msa1336480:intergenic 35.0%
AGTGATGCAAATTCTTCAAG+TGG - tig0001216:6523-6542 Msa1336480:CDS 35.0%
TTTCATCAACCACCATATCT+AGG + tig0001216:6613-6632 Msa1336480:intergenic 35.0%
TGCAACAGGATAAAGTCTTA+AGG + tig0001216:6636-6655 Msa1336480:intergenic 35.0%
CATTCACGAGGGATTAATAA+AGG + tig0001216:6659-6678 Msa1336480:intergenic 35.0%
AGAGAGAACATAACAGTTGA+TGG - tig0001216:6680-6699 Msa1336480:CDS 35.0%
CACGAGTTATAGTAAATGCA+TGG - tig0001216:6723-6742 Msa1336480:CDS 35.0%
ATAGTAAATGCATGGGCAAT+TGG - tig0001216:6731-6750 Msa1336480:CDS 35.0%
TAGTAAATGCATGGGCAATT+GGG - tig0001216:6732-6751 Msa1336480:CDS 35.0%
! GCATTTTCTGACCAAACATT+AGG + tig0001216:6764-6783 Msa1336480:intergenic 35.0%
! GAATCTATACCATTTGGTTC+TGG - tig0001216:6845-6864 Msa1336480:CDS 35.0%
ATCAAACCCAATTGAATTCC+AGG + tig0001216:6884-6903 Msa1336480:intergenic 35.0%
!!! AATTGGTGCACTGTTTTGAT+TGG - tig0001216:6927-6946 Msa1336480:CDS 35.0%
!!! ATTGGTGCACTGTTTTGATT+GGG - tig0001216:6928-6947 Msa1336480:CDS 35.0%
TCCTTCCAATATGAATATGG+AGG - tig0001216:6970-6989 Msa1336480:CDS 35.0%
TCCTCCATATTCATATTGGA+AGG + tig0001216:6974-6993 Msa1336480:intergenic 35.0%
GTAAAGATGCTAATTATGGC+AGG - tig0001216:7123-7142 Msa1336480:exon 35.0%
ATCAAGAACTCCATGCATGT+TGG + tig0001216:4564-4583 Msa1336480:intergenic 40.0%
!! CCTATTATTGGTAGTGTTGG+TGG + tig0001216:4749-4768 Msa1336480:intergenic 40.0%
CCACCAACACTACCAATAAT+AGG - tig0001216:4746-4765 Msa1336480:CDS 40.0%
GCAATCATGTCCTTACAACT+TGG - tig0001216:4833-4852 Msa1336480:CDS 40.0%
TGGAACTTGACCAAGTTGTA+AGG + tig0001216:4846-4865 Msa1336480:intergenic 40.0%
! AAACGATGTCATGGGTTTTG+AGG + tig0001216:4907-4926 Msa1336480:intergenic 40.0%
AGGTCAGATCCTTGAATCTT+CGG + tig0001216:4941-4960 Msa1336480:intergenic 40.0%
!! CTTTAGAACCATAGGACATG+AGG + tig0001216:4961-4980 Msa1336480:intergenic 40.0%
!! CTCATGTCCTATGGTTCTAA+AGG - tig0001216:4959-4978 Msa1336480:CDS 40.0%
TTCCTCATATTGCGCCAATA+AGG + tig0001216:5007-5026 Msa1336480:intergenic 40.0%
GCTTCAAAAGTTGAGAAGTC+GGG - tig0001216:5052-5071 Msa1336480:CDS 40.0%
!! GTCGGGTCATTTTAGAAAAG+AGG - tig0001216:5069-5088 Msa1336480:CDS 40.0%
! AAAAGAGGAGTTGGGTGTTT+TGG - tig0001216:5084-5103 Msa1336480:CDS 40.0%
ATCTGGCTGATTATGTTCCT+TGG - tig0001216:5278-5297 Msa1336480:CDS 40.0%
AAGGTTATGATTAAGGACGG+AGG - tig0001216:5597-5616 Msa1336480:intron 40.0%
CCATAGAGGGAAAAACACAA+AGG + tig0001216:5796-5815 Msa1336480:intergenic 40.0%
! CCTTTGTGTTTTTCCCTCTA+TGG - tig0001216:5793-5812 Msa1336480:intron 40.0%
! CAAGTCTTATCCGATTGAGT+AGG - tig0001216:6103-6122 Msa1336480:intron 40.0%
CACCAAACCATTGATGTTGA+GGG - tig0001216:6374-6393 Msa1336480:intron 40.0%
TTGTTCACCCTCAACATCAA+TGG + tig0001216:6384-6403 Msa1336480:intergenic 40.0%
CATTGATCGAACGATCATCA+AGG - tig0001216:6412-6431 Msa1336480:CDS 40.0%
!! GCTATTTTGCTCGACATGAT+AGG - tig0001216:6434-6453 Msa1336480:CDS 40.0%
ATCTGCAAACGTGATTGAGT+GGG - tig0001216:6472-6491 Msa1336480:CDS 40.0%
! GGGATTAATAAAGGTGCAAC+AGG + tig0001216:6650-6669 Msa1336480:intergenic 40.0%
TGTTCTCTCTACATTCACGA+GGG + tig0001216:6670-6689 Msa1336480:intergenic 40.0%
ATGTTCTCTCTACATTCACG+AGG + tig0001216:6671-6690 Msa1336480:intergenic 40.0%
TTGGGAGAGATCCTAATGTT+TGG - tig0001216:6750-6769 Msa1336480:CDS 40.0%
ACGTTGTCCTGGAATTCAAT+TGG - tig0001216:6874-6893 Msa1336480:CDS 40.0%
CGTTGTCCTGGAATTCAATT+GGG - tig0001216:6875-6894 Msa1336480:CDS 40.0%
GGGTTTGATTACGGTAAAGT+TGG - tig0001216:6895-6914 Msa1336480:CDS 40.0%
CGCAATACCAAGTTATCGTT+TGG - tig0001216:7033-7052 Msa1336480:CDS 40.0%
GCATCATCCAAACGATAACT+TGG + tig0001216:7043-7062 Msa1336480:intergenic 40.0%
GCTAGCGAAAACGATGTCAT+GGG + tig0001216:4915-4934 Msa1336480:intergenic 45.0%
CAGATCCTTGAATCTTCGGT+CGG + tig0001216:4937-4956 Msa1336480:intergenic 45.0%
!! AGGCATCCCTTTAGAACCAT+AGG + tig0001216:4969-4988 Msa1336480:intergenic 45.0%
! GGGATGCCTTTTTCTGAGTA+TGG - tig0001216:4980-4999 Msa1336480:CDS 45.0%
GTCCTTATTGGCGCAATATG+AGG - tig0001216:5002-5021 Msa1336480:CDS 45.0%
GCTGATTATGTTCCTTGGCT+AGG - tig0001216:5283-5302 Msa1336480:CDS 45.0%
GCACCAAACCATTGATGTTG+AGG - tig0001216:6373-6392 Msa1336480:intron 45.0%
CACCCTCAACATCAATGGTT+TGG + tig0001216:6379-6398 Msa1336480:intergenic 45.0%
CATCTGCAAACGTGATTGAG+TGG - tig0001216:6471-6490 Msa1336480:CDS 45.0%
! GTGGACCTGGTGGCTTTTTA+TGG + tig0001216:4730-4749 Msa1336480:intergenic 50.0%
!! ATTGGTAGTGTTGGTGGACC+TGG + tig0001216:4743-4762 Msa1336480:intergenic 50.0%
GGCTAGCGAAAACGATGTCA+TGG + tig0001216:4916-4935 Msa1336480:intergenic 50.0%
GGATCTGACCTCATGTCCTA+TGG - tig0001216:4950-4969 Msa1336480:CDS 50.0%
GAAGGCTTCTTTGGTAGGTG+AGG - tig0001216:5120-5139 Msa1336480:CDS 50.0%
AGGTCAAAAACGCCTAGCCA+AGG + tig0001216:5298-5317 Msa1336480:intergenic 50.0%
! GCTAGGCGTTTTTGACCTTC+AGG - tig0001216:5300-5319 Msa1336480:CDS 50.0%
CGTCTACGACCAGAACCAAA+TGG + tig0001216:6857-6876 Msa1336480:intergenic 50.0%
GCTAGCCGACCGAAGATTCA+AGG - tig0001216:4929-4948 Msa1336480:CDS 55.0%
TCTGGTCGTAGACGTTGTCC+TGG - tig0001216:6863-6882 Msa1336480:CDS 55.0%
GCGTGCAAATGCTGAGCTCT+TGG + tig0001216:7016-7035 Msa1336480:intergenic 55.0%
!! GGTAGTGTTGGTGGACCTGG+TGG + tig0001216:4740-4759 Msa1336480:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0001216 gene 4544 7155 4544 ID=Msa1336480;Name=Msa1336480
tig0001216 mRNA 4544 7155 4544 ID=Msa1336480-mRNA-1;Parent=Msa1336480;Name=Msa1336480-mRNA-1;_AED=0.34;_eAED=0.34;_QI=22|1|1|1|1|1|2|80|529
tig0001216 exon 4544 5457 4544 ID=Msa1336480-mRNA-1:exon:745;Parent=Msa1336480-mRNA-1
tig0001216 exon 6378 7155 6378 ID=Msa1336480-mRNA-1:exon:744;Parent=Msa1336480-mRNA-1
tig0001216 five_prime_UTR 7134 7155 7134 ID=Msa1336480-mRNA-1:five_prime_utr;Parent=Msa1336480-mRNA-1
tig0001216 CDS 6378 7133 6378 ID=Msa1336480-mRNA-1:cds;Parent=Msa1336480-mRNA-1
tig0001216 CDS 4624 5457 4624 ID=Msa1336480-mRNA-1:cds;Parent=Msa1336480-mRNA-1
tig0001216 three_prime_UTR 4544 4623 4544 ID=Msa1336480-mRNA-1:three_prime_utr;Parent=Msa1336480-mRNA-1
Gene Sequence

>Msa1336480

ATGCATGGAGTTCTTGATATCTTCATTCTTGCTACTTCAGCCAAACCAAGATTCATTGTAGTCATGTCTTTTGCAGCAACAACTATACTTTATTTCCTTCTCTTCACTTTCATATACCTTTTATTCAAACTTTTCTTACATCCAAAACAAAAAACCATTAACCATAAAAAGCCACCAGGTCCACCAACACTACCAATAATAGGAAACCTTCACATATTAGGTAAACTTCCACATAGAACACTTCAATCACTCTCCAAAAAATATGGTGCAATCATGTCCTTACAACTTGGTCAAGTTCCAACAATTGTTATTTCATCTTCAAAAGCTGCAGAGTCATTCCTCAAAACCCATGACATCGTTTTCGCTAGCCGACCGAAGATTCAAGGATCTGACCTCATGTCCTATGGTTCTAAAGGGATGCCTTTTTCTGAGTATGGTCCTTATTGGCGCAATATGAGGAAATTTTGCACTTTGAAACTTCTTAGTGCTTCAAAAGTTGAGAAGTCGGGTCATTTTAGAAAAGAGGAGTTGGGTGTTTTGGTTAACACTTTAAAGAAGGCTTCTTTGGTAGGTGAGGTTGTGAATGTAAGTGAGATTGTAGAGAATCTTATTGAATATATTGTGTATAAGATGATATTGGGTAGGGGTAAGTATGATCAATTTGACTTGAAGAAGATGATTAAAGATGGATTAACTTTGATGGGAGCTTTTAATCTGGCTGATTATGTTCCTTGGCTAGGCGTTTTTGACCTTCAGGGATTAACACAAGCTTGCAAAAAAACCAGTAAAGCTCTTGATGAAGTTTTGGAGATGATAATAAAAGAGCATGAACAAACTACTAATACATACAATCCTAAAGATTTTGTAGACACACTTCTTTCAATTATGCACCAAACCATTGATGTTGAGGGTGAACAAGATGTCGTCATTGATCGAACGATCATCAAGGCTATTTTGCTCGACATGATAGGGGCATCAATTGATACATCTGCAAACGTGATTGAGTGGGCTTTATCTGAACTTTTAAGGCATCCAAGAGTGATGCAAATTCTTCAAGTGGAAATACAAAATGAAGTAGGAAATAAGAGAATGGTTGAAGAAAACGATTTGAAGAATTTTAATTACCTAGATATGGTGGTTGATGAAACCTTAAGACTTTATCCTGTTGCACCTTTATTAATCCCTCGTGAATGTAGAGAGAACATAACAGTTGATGGTTATTTTATAAAAGAAAAGACACGAGTTATAGTAAATGCATGGGCAATTGGGAGAGATCCTAATGTTTGGTCAGAAAATGCTGAAGAATTTTACCCAGAGAGATTTATTGAGAAAAAAATGAATTATCTCGGACAAGAGTTTGAATCTATACCATTTGGTTCTGGTCGTAGACGTTGTCCTGGAATTCAATTGGGTTTGATTACGGTAAAGTTGGTTATAGCTCAATTGGTGCACTGTTTTGATTGGGAACTTCCATATGATATTAGTCCTTCCAATATGAATATGGAGGAGAAATTTGGACTCACTATACCAAGAGCTCAGCATTTGCACGCAATACCAAGTTATCGTTTGGATGATGCTAAGCAAGAATAG
Protein sequence

>Msa1336480

MHGVLDIFILATSAKPRFIVVMSFAATTILYFLLFTFIYLLFKLFLHPKQKTINHKKPPGPPTLPIIGNLHILGKLPHRTLQSLSKKYGAIMSLQLGQVPTIVISSSKAAESFLKTHDIVFASRPKIQGSDLMSYGSKGMPFSEYGPYWRNMRKFCTLKLLSASKVEKSGHFRKEELGVLVNTLKKASLVGEVVNVSEIVENLIEYIVYKMILGRGKYDQFDLKKMIKDGLTLMGAFNLADYVPWLGVFDLQGLTQACKKTSKALDEVLEMIIKEHEQTTNTYNPKDFVDTLLSIMHQTIDVEGEQDVVIDRTIIKAILLDMIGASIDTSANVIEWALSELLRHPRVMQILQVEIQNEVGNKRMVEENDLKNFNYLDMVVDETLRLYPVAPLLIPRECRENITVDGYFIKEKTRVIVNAWAIGRDPNVWSENAEEFYPERFIEKKMNYLGQEFESIPFGSGRRRCPGIQLGLITVKLVIAQLVHCFDWELPYDISPSNMNMEEKFGLTIPRAQHLHAIPSYRLDDAKQE*