AlfalfaGEDB | MS.gene044361

M. sativa cultivar XinJiangDaYe / MS.gene044361

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044361.t1	RHN69093.1	59.5	173	61	5	67	238	69	233	2.40E-41	179.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044361.t1	G7J9I4	59.5	173	61	5	67	238	48	212	1.8e-41	179.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene044361	MS.gene71284	PPI
MS.gene044361	MS.gene044376	PPI
MS.gene044243	MS.gene044361	PPI
MS.gene044361	MS.gene045214	PPI
MS.gene044284	MS.gene044361	PPI
MS.gene044361	MS.gene70441	PPI
MS.gene71527	MS.gene044361	PPI
MS.gene044361	MS.gene77466	PPI
MS.gene71532	MS.gene044361	PPI
MS.gene70440	MS.gene044361	PPI
MS.gene044361	MS.gene69757	PPI
MS.gene79115	MS.gene044361	PPI
MS.gene044370	MS.gene044361	PPI
MS.gene044361	MS.gene25749	PPI
MS.gene044361	MS.gene71282	PPI
MS.gene044377	MS.gene044361	PPI
MS.gene044361	MS.gene69758	PPI
MS.gene044211	MS.gene044361	PPI
MS.gene044361	MS.gene71524	PPI
MS.gene044361	MS.gene71528	PPI
MS.gene044361	MS.gene70424	PPI
MS.gene044361	MS.gene067686	PPI
MS.gene70443	MS.gene044361	PPI
MS.gene70949	MS.gene044361	PPI
MS.gene70425	MS.gene044361	PPI
MS.gene044361	MS.gene77464	PPI
MS.gene044363	MS.gene044361	PPI
MS.gene044361	MS.gene044364	PPI
MS.gene25703	MS.gene044361	PPI
MS.gene044361	MS.gene70516	PPI
MS.gene073908	MS.gene044361	PPI
MS.gene044361	MS.gene044359	PPI
MS.gene70430	MS.gene044361	PPI
MS.gene044361	MS.gene044326	PPI
MS.gene044361	MS.gene06352	PPI
MS.gene044361	MS.gene70439	PPI
MS.gene064006	MS.gene044361	PPI
MS.gene71529	MS.gene044361	PPI
MS.gene044361	MS.gene70427	PPI
MS.gene70418	MS.gene044361	PPI
MS.gene044361	MS.gene70476	PPI
MS.gene044361	MS.gene044369	PPI
MS.gene044361	MS.gene71286	PPI
MS.gene73915	MS.gene044361	PPI
MS.gene044361	MS.gene044215	PPI
MS.gene77469	MS.gene044361	PPI
MS.gene044361	MS.gene25756	PPI
MS.gene044361	MS.gene044282	PPI
MS.gene044361	MS.gene049263	PPI
MS.gene71285	MS.gene044361	PPI
MS.gene77472	MS.gene044361	PPI
MS.gene70511	MS.gene044361	PPI
MS.gene77461	MS.gene044361	PPI
MS.gene044361	MS.gene25704	PPI
MS.gene044361	MS.gene77468	PPI
MS.gene044361	MS.gene71531	PPI
MS.gene044361	MS.gene70426	PPI
MS.gene044361	MS.gene77462	PPI
MS.gene044361	MS.gene044323	PPI
MS.gene044361	MS.gene044375	PPI
MS.gene70436	MS.gene044361	PPI
MS.gene044361	MS.gene70433	PPI
MS.gene25704	MS.gene044361	PPI
MS.gene70434	MS.gene044361	PPI
MS.gene77467	MS.gene044361	PPI
MS.gene044361	MS.gene70431	PPI
MS.gene70428	MS.gene044361	PPI
MS.gene71530	MS.gene044361	PPI
MS.gene70445	MS.gene044361	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene044361.t1	MTR_3g083150	51.452	241	83	9	1	238	3	212	5.59e-55	176
MS.gene044361.t1	MTR_3g083030	38.683	243	129	11	2	239	4	231	1.21e-37	132
MS.gene044361.t1	MTR_3g083050	37.295	244	112	11	1	239	1	208	8.54e-34	121
MS.gene044361.t1	MTR_3g083100	52.632	133	49	5	117	238	45	174	1.38e-32	117
MS.gene044361.t1	MTR_3g083080	43.182	176	89	6	63	237	40	205	2.62e-29	109
MS.gene044361.t1	MTR_3g082340	37.295	244	124	12	1	237	1	222	6.87e-29	108
MS.gene044361.t1	MTR_3g082420	37.557	221	117	12	24	237	15	221	8.08e-26	100
MS.gene044361.t1	MTR_3g080680	33.005	203	113	7	45	237	9	198	1.67e-15	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 75 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTCTGTTGTAGCAGCTTTC+CGG	0.155757	3.3:+69738960	None:intergenic
TTGGGTTATGGGAAAGGGTC+TGG	0.210252	3.3:+69738495	None:intergenic
AGGGATACGTTGTTGGGTTA+TGG	0.235089	3.3:+69738483	None:intergenic
TCCGAATCCGAGTCAGATTC+TGG	0.250389	3.3:+69738906	None:intergenic
CTCTGTTGTAGCAGCTTTCC+GGG	0.261650	3.3:+69738961	None:intergenic
GTATTTGCTGCGCGTGGAAT+AGG	0.277573	3.3:+69738535	None:intergenic
GGGATACGTTGTTGGGTTAT+GGG	0.293781	3.3:+69738484	None:intergenic
TTATTCTCATAAACAAATTT+CGG	0.296115	3.3:+69738732	None:intergenic
AAGCTGGACAAACTCATATT+TGG	0.298094	3.3:+69738315	None:intergenic
TCTCGTTCCGCTTCCCGTTT+CGG	0.333023	3.3:+69738930	None:intergenic
TACCATGGTGCGTTAATTAG+AGG	0.349376	3.3:+69738117	None:intergenic
ACGCCTCTCCAAACTTGCTT+TGG	0.354815	3.3:-69738452	MS.gene044361:CDS
TGGAGAGGCGTTTGAGAAGA+GGG	0.361494	3.3:+69738464	None:intergenic
GGTTCAACAACTTGAGGTAT+TGG	0.363055	3.3:+69738229	None:intergenic
AAAATACAATGTTGACAATC+AGG	0.364241	3.3:-69738428	MS.gene044361:intron
ATCGAAAGTGAAAGTGGAAT+TGG	0.367090	3.3:-69738853	MS.gene044361:CDS
TCGACCGAGACTCTCGTGTT+TGG	0.383497	3.3:-69739002	MS.gene044361:CDS
TGGGTTATGGGAAAGGGTCT+GGG	0.394715	3.3:+69738496	None:intergenic
GAGAAGAGGGATACGTTGTT+GGG	0.411423	3.3:+69738477	None:intergenic
TAATAAGTACCAAGAGGAAT+AGG	0.423275	3.3:+69738274	None:intergenic
CTCGGATTCGGAATCGGAAT+CGG	0.425215	3.3:-69738895	MS.gene044361:CDS
ATCTGACTCGGATTCGGAAT+CGG	0.428389	3.3:-69738901	MS.gene044361:CDS
ACCAGAATCTGACTCGGATT+CGG	0.435178	3.3:-69738907	MS.gene044361:CDS
CAGAGGGAAGTGGCCGAAAC+GGG	0.441096	3.3:-69738943	MS.gene044361:CDS
TGAGAAGAGGGATACGTTGT+TGG	0.443257	3.3:+69738476	None:intergenic
CTCTCCTTCAGATCTTCTAA+TGG	0.445268	3.3:+69738807	None:intergenic
GCCTGAAAAGTTGTTGTAGC+AGG	0.449700	3.3:+69738196	None:intergenic
ACCCGTTCTCCTATTCCTCT+TGG	0.450300	3.3:-69738283	MS.gene044361:CDS
CATGTCTGGAACAAGATATC+TGG	0.451078	3.3:-69738172	MS.gene044361:CDS
AGTTGTTGTAGCAGGGGTGT+TGG	0.460802	3.3:+69738204	None:intergenic
TATTTGCTGCGCGTGGAATA+GGG	0.467085	3.3:+69738536	None:intergenic
TTGGAGAGGCGTTTGAGAAG+AGG	0.471987	3.3:+69738463	None:intergenic
AACGGGTTGCCTTGACAAGC+TGG	0.476282	3.3:+69738299	None:intergenic
AAGTGGAATTGGACCCGTTA+TGG	0.482799	3.3:-69738842	MS.gene044361:CDS
AAAATGCTGTCGAAAAGTAT+TGG	0.492089	3.3:-69738680	MS.gene044361:CDS
GTATCCGTTCCCACCATAAC+GGG	0.494522	3.3:+69738829	None:intergenic
ACCAAGAGGAATAGGAGAAC+GGG	0.497967	3.3:+69738282	None:intergenic
CAAGATATCTGGAACAACTA+AGG	0.499344	3.3:-69738161	MS.gene044361:CDS
CAGATATCTTGTTCCAGACA+TGG	0.500861	3.3:+69738173	None:intergenic
ACGTTGTTGGGTTATGGGAA+AGG	0.502825	3.3:+69738489	None:intergenic
AGCCGCCATCCAACCTCCCC+CGG	0.506131	3.3:-69738979	MS.gene044361:CDS
ACAGAGGGAAGTGGCCGAAA+CGG	0.508391	3.3:-69738944	MS.gene044361:CDS
ATCGGAATCGGAATCAGAAT+CGG	0.511451	3.3:-69738883	MS.gene044361:CDS
GTTGTAGCAGGGGTGTTGGA+AGG	0.514159	3.3:+69738208	None:intergenic
CGTTGTTGGGTTATGGGAAA+GGG	0.515504	3.3:+69738490	None:intergenic
GAAGTGGCCGAAACGGGAAG+CGG	0.529767	3.3:-69738937	MS.gene044361:CDS
GGTATCCGTTCCCACCATAA+CGG	0.532487	3.3:+69738828	None:intergenic
AGTAGAATCGAAAGTGAAAG+TGG	0.543261	3.3:-69738859	MS.gene044361:CDS
TGGAATAGGGATGGCATCGA+AGG	0.543328	3.3:+69738549	None:intergenic
AGATATCTTGTTCCAGACAT+GGG	0.545976	3.3:+69738174	None:intergenic
GAAAAGGATCATCTTCATAA+CGG	0.546737	3.3:+69738772	None:intergenic
GGCTCCAAACACGAGAGTCT+CGG	0.559644	3.3:+69738998	None:intergenic
TGGAATTGGACCCGTTATGG+TGG	0.566427	3.3:-69738839	MS.gene044361:CDS
TCTGTTGTAGCAGCTTTCCG+GGG	0.568607	3.3:+69738962	None:intergenic
TACCAAGAGGAATAGGAGAA+CGG	0.570966	3.3:+69738281	None:intergenic
TGCTGTCGAAAAGTATTGGA+AGG	0.572056	3.3:-69738676	MS.gene044361:CDS
GATACCATTAGAAGATCTGA+AGG	0.573494	3.3:-69738811	MS.gene044361:CDS
TTGGAAGGTTCAACAACTTG+AGG	0.575752	3.3:+69738223	None:intergenic
TGGACCCGTTATGGTGGGAA+CGG	0.578043	3.3:-69738833	MS.gene044361:CDS
CGGAAAGCTGCTACAACAGA+GGG	0.584202	3.3:-69738959	MS.gene044361:CDS
TGAGTTTGTCCAGCTTGTCA+AGG	0.586521	3.3:-69738308	MS.gene044361:CDS
CCGGAAAGCTGCTACAACAG+AGG	0.589302	3.3:-69738960	MS.gene044361:CDS
CCTGAAAAGTTGTTGTAGCA+GGG	0.590814	3.3:+69738197	None:intergenic
CTGAAAAGTTGTTGTAGCAG+GGG	0.591211	3.3:+69738198	None:intergenic
GCTGCTACAACAGAGGGAAG+TGG	0.596216	3.3:-69738953	MS.gene044361:CDS
CCACATGTATTTGCTGCGCG+TGG	0.600455	3.3:+69738529	None:intergenic
TTTCCAAAGCAAGTTTGGAG+AGG	0.618640	3.3:+69738449	None:intergenic
TGCTGCGCGTGGAATAGGGA+TGG	0.619194	3.3:+69738540	None:intergenic
AGCTATGAGAGATAAAGAAG+AGG	0.620914	3.3:-69738709	MS.gene044361:CDS
GGAATAGGGATGGCATCGAA+GGG	0.630858	3.3:+69738550	None:intergenic
GGAATTGGACCCGTTATGGT+GGG	0.637797	3.3:-69738838	MS.gene044361:CDS
CTGTTGTAGCAGCTTTCCGG+GGG	0.645513	3.3:+69738963	None:intergenic
ACGAGAACCAGAATCTGACT+CGG	0.655126	3.3:-69738913	MS.gene044361:CDS
GTAATGTAATAAGTACCAAG+AGG	0.663480	3.3:+69738268	None:intergenic
CCACGCGCAGCAAATACATG+TGG	0.685685	3.3:-69738529	MS.gene044361:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAAACTAAAATTAAGAG+AGG	+	chr3.3:69738513-69738532	None:intergenic	15.0%
!!	GATATAAACAAAAACAATAT+TGG	+	chr3.3:69738750-69738769	None:intergenic	15.0%
!!	TTAAAACTAAAATTAAGAGA+GGG	+	chr3.3:69738512-69738531	None:intergenic	15.0%
!!	TTATTCTCATAAACAAATTT+CGG	+	chr3.3:69738405-69738424	None:intergenic	15.0%
!!!	TACTTATTACATTACTTTTA+AGG	-	chr3.3:69738874-69738893	MS.gene044361:CDS	15.0%
!	AAAATACAATGTTGACAATC+AGG	-	chr3.3:69738706-69738725	MS.gene044361:CDS	25.0%
	ATTTGGCCTAAATAAGAGAA+AGG	+	chr3.3:69738805-69738824	None:intergenic	30.0%
	CACGTAAAAAAGTAAGGAAA+AGG	+	chr3.3:69738381-69738400	None:intergenic	30.0%
	GAAAAGGATCATCTTCATAA+CGG	+	chr3.3:69738365-69738384	None:intergenic	30.0%
	GTAATGTAATAAGTACCAAG+AGG	+	chr3.3:69738869-69738888	None:intergenic	30.0%
	TAATAAGTACCAAGAGGAAT+AGG	+	chr3.3:69738863-69738882	None:intergenic	30.0%
!	AAAATGCTGTCGAAAAGTAT+TGG	-	chr3.3:69738454-69738473	MS.gene044361:CDS	30.0%
!	GTATTTTTCCAAAGCAAGTT+TGG	+	chr3.3:69738693-69738712	None:intergenic	30.0%
!	GTTCTTCCTTTCTCTTATTT+AGG	-	chr3.3:69738796-69738815	MS.gene044361:CDS	30.0%
	AAGCTGGACAAACTCATATT+TGG	+	chr3.3:69738822-69738841	None:intergenic	35.0%
	AGAAAGGAAGAACAATGAAG+CGG	+	chr3.3:69738789-69738808	None:intergenic	35.0%
	AGATATCTTGTTCCAGACAT+GGG	+	chr3.3:69738963-69738982	None:intergenic	35.0%
	AGCTATGAGAGATAAAGAAG+AGG	-	chr3.3:69738425-69738444	MS.gene044361:intron	35.0%
	AGTAGAATCGAAAGTGAAAG+TGG	-	chr3.3:69738275-69738294	MS.gene044361:CDS	35.0%
	ATCGAAAGTGAAAGTGGAAT+TGG	-	chr3.3:69738281-69738300	MS.gene044361:CDS	35.0%
	GATACCATTAGAAGATCTGA+AGG	-	chr3.3:69738323-69738342	MS.gene044361:intron	35.0%
	TTCGGACACGTAAAAAAGTA+AGG	+	chr3.3:69738387-69738406	None:intergenic	35.0%
!	CAAGATATCTGGAACAACTA+AGG	-	chr3.3:69738973-69738992	MS.gene044361:CDS	35.0%
	ATCGGAATCGGAATCAGAAT+CGG	-	chr3.3:69738251-69738270	MS.gene044361:CDS	40.0%
	CAGATATCTTGTTCCAGACA+TGG	+	chr3.3:69738964-69738983	None:intergenic	40.0%
	CCTGAAAAGTTGTTGTAGCA+GGG	+	chr3.3:69738940-69738959	None:intergenic	40.0%
	CTCTCCTTCAGATCTTCTAA+TGG	+	chr3.3:69738330-69738349	None:intergenic	40.0%
	CTGAAAAGTTGTTGTAGCAG+GGG	+	chr3.3:69738939-69738958	None:intergenic	40.0%
	GGTTCAACAACTTGAGGTAT+TGG	+	chr3.3:69738908-69738927	None:intergenic	40.0%
	TACCAAGAGGAATAGGAGAA+CGG	+	chr3.3:69738856-69738875	None:intergenic	40.0%
	TTGGAAGGTTCAACAACTTG+AGG	+	chr3.3:69738914-69738933	None:intergenic	40.0%
	TTTCCAAAGCAAGTTTGGAG+AGG	+	chr3.3:69738688-69738707	None:intergenic	40.0%
!	CATGTCTGGAACAAGATATC+TGG	-	chr3.3:69738962-69738981	MS.gene044361:CDS	40.0%
!!	TGCTGTCGAAAAGTATTGGA+AGG	-	chr3.3:69738458-69738477	MS.gene044361:CDS	40.0%
	AAGTGGAATTGGACCCGTTA+TGG	-	chr3.3:69738292-69738311	MS.gene044361:CDS	45.0%
	ACCAAGAGGAATAGGAGAAC+GGG	+	chr3.3:69738855-69738874	None:intergenic	45.0%
	ACGAGAACCAGAATCTGACT+CGG	-	chr3.3:69738221-69738240	MS.gene044361:CDS	45.0%
	ACGTTGTTGGGTTATGGGAA+AGG	+	chr3.3:69738648-69738667	None:intergenic	45.0%
	AGGGATACGTTGTTGGGTTA+TGG	+	chr3.3:69738654-69738673	None:intergenic	45.0%
	CGTTGTTGGGTTATGGGAAA+GGG	+	chr3.3:69738647-69738666	None:intergenic	45.0%
	GAGAAGAGGGATACGTTGTT+GGG	+	chr3.3:69738660-69738679	None:intergenic	45.0%
	GCCTGAAAAGTTGTTGTAGC+AGG	+	chr3.3:69738941-69738960	None:intergenic	45.0%
	GGGATACGTTGTTGGGTTAT+GGG	+	chr3.3:69738653-69738672	None:intergenic	45.0%
	TGAGAAGAGGGATACGTTGT+TGG	+	chr3.3:69738661-69738680	None:intergenic	45.0%
	TGAGTTTGTCCAGCTTGTCA+AGG	-	chr3.3:69738826-69738845	MS.gene044361:CDS	45.0%
!	CCCTGCTACAACAACTTTTC+AGG	-	chr3.3:69738937-69738956	MS.gene044361:CDS	45.0%
!	TATTTGCTGCGCGTGGAATA+GGG	+	chr3.3:69738601-69738620	None:intergenic	45.0%
!!	ACCAGAATCTGACTCGGATT+CGG	-	chr3.3:69738227-69738246	MS.gene044361:CDS	45.0%
!!	ATCTGACTCGGATTCGGAAT+CGG	-	chr3.3:69738233-69738252	MS.gene044361:CDS	45.0%
	ACCCGTTCTCCTATTCCTCT+TGG	-	chr3.3:69738851-69738870	MS.gene044361:CDS	50.0%
	CCTCTGTTGTAGCAGCTTTC+CGG	+	chr3.3:69738177-69738196	None:intergenic	50.0%
	CGGAAAGCTGCTACAACAGA+GGG	-	chr3.3:69738175-69738194	MS.gene044361:CDS	50.0%
	CTCGGATTCGGAATCGGAAT+CGG	-	chr3.3:69738239-69738258	MS.gene044361:CDS	50.0%
	CTCTGTTGTAGCAGCTTTCC+GGG	+	chr3.3:69738176-69738195	None:intergenic	50.0%
	GGAATTGGACCCGTTATGGT+GGG	-	chr3.3:69738296-69738315	MS.gene044361:CDS	50.0%
	GGTATCCGTTCCCACCATAA+CGG	+	chr3.3:69738309-69738328	None:intergenic	50.0%
	GTATCCGTTCCCACCATAAC+GGG	+	chr3.3:69738308-69738327	None:intergenic	50.0%
	TCCGAATCCGAGTCAGATTC+TGG	+	chr3.3:69738231-69738250	None:intergenic	50.0%
	TCTGTTGTAGCAGCTTTCCG+GGG	+	chr3.3:69738175-69738194	None:intergenic	50.0%
	TGGAATTGGACCCGTTATGG+TGG	-	chr3.3:69738295-69738314	MS.gene044361:CDS	50.0%
	TGGGTTATGGGAAAGGGTCT+GGG	+	chr3.3:69738641-69738660	None:intergenic	50.0%
	TTGGGTTATGGGAAAGGGTC+TGG	+	chr3.3:69738642-69738661	None:intergenic	50.0%
!	ACGCCTCTCCAAACTTGCTT+TGG	-	chr3.3:69738682-69738701	MS.gene044361:CDS	50.0%
!	AGTTGTTGTAGCAGGGGTGT+TGG	+	chr3.3:69738933-69738952	None:intergenic	50.0%
!	GGAATAGGGATGGCATCGAA+GGG	+	chr3.3:69738587-69738606	None:intergenic	50.0%
!	GTATTTGCTGCGCGTGGAAT+AGG	+	chr3.3:69738602-69738621	None:intergenic	50.0%
!	TGGAATAGGGATGGCATCGA+AGG	+	chr3.3:69738588-69738607	None:intergenic	50.0%
!!	CAACTTTTCAGGCCCATGTC+TGG	-	chr3.3:69738948-69738967	MS.gene044361:CDS	50.0%
!!	TGGAGAGGCGTTTGAGAAGA+GGG	+	chr3.3:69738673-69738692	None:intergenic	50.0%
!!	TTGGAGAGGCGTTTGAGAAG+AGG	+	chr3.3:69738674-69738693	None:intergenic	50.0%
	ACAGAGGGAAGTGGCCGAAA+CGG	-	chr3.3:69738190-69738209	MS.gene044361:CDS	55.0%
	CCACGCGCAGCAAATACATG+TGG	-	chr3.3:69738605-69738624	MS.gene044361:intron	55.0%
	CCGGAAAGCTGCTACAACAG+AGG	-	chr3.3:69738174-69738193	MS.gene044361:CDS	55.0%
	CTGTTGTAGCAGCTTTCCGG+GGG	+	chr3.3:69738174-69738193	None:intergenic	55.0%
	GCTGCTACAACAGAGGGAAG+TGG	-	chr3.3:69738181-69738200	MS.gene044361:CDS	55.0%
	GGCTCCAAACACGAGAGTCT+CGG	+	chr3.3:69738139-69738158	None:intergenic	55.0%
	TCGACCGAGACTCTCGTGTT+TGG	-	chr3.3:69738132-69738151	MS.gene044361:CDS	55.0%
	TCTCGTTCCGCTTCCCGTTT+CGG	+	chr3.3:69738207-69738226	None:intergenic	55.0%
!	CCACATGTATTTGCTGCGCG+TGG	+	chr3.3:69738608-69738627	None:intergenic	55.0%
!	TGGACCCGTTATGGTGGGAA+CGG	-	chr3.3:69738301-69738320	MS.gene044361:CDS	55.0%
!!	AACGGGTTGCCTTGACAAGC+TGG	+	chr3.3:69738838-69738857	None:intergenic	55.0%
!!	GTTGTAGCAGGGGTGTTGGA+AGG	+	chr3.3:69738929-69738948	None:intergenic	55.0%
	CAGAGGGAAGTGGCCGAAAC+GGG	-	chr3.3:69738191-69738210	MS.gene044361:CDS	60.0%
	GAAGTGGCCGAAACGGGAAG+CGG	-	chr3.3:69738197-69738216	MS.gene044361:CDS	60.0%
	TGCTGCGCGTGGAATAGGGA+TGG	+	chr3.3:69738597-69738616	None:intergenic	60.0%
	TTGTAGCAGCTTTCCGGGGG+AGG	+	chr3.3:69738171-69738190	None:intergenic	60.0%
	AGCAGCTTTCCGGGGGAGGT+TGG	+	chr3.3:69738167-69738186	None:intergenic	65.0%
	GCTTTCCGGGGGAGGTTGGA+TGG	+	chr3.3:69738163-69738182	None:intergenic	65.0%
	TTCCGGGGGAGGTTGGATGG+CGG	+	chr3.3:69738160-69738179	None:intergenic	65.0%
	AGCCGCCATCCAACCTCCCC+CGG	-	chr3.3:69738155-69738174	MS.gene044361:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	69738129	69739027	69738129	ID=MS.gene044361
chr3.3	mRNA	69738129	69739027	69738129	ID=MS.gene044361.t1;Parent=MS.gene044361
chr3.3	exon	69738659	69739027	69738659	ID=MS.gene044361.t1.exon1;Parent=MS.gene044361.t1
chr3.3	CDS	69738659	69739027	69738659	ID=cds.MS.gene044361.t1;Parent=MS.gene044361.t1
chr3.3	exon	69738429	69738572	69738429	ID=MS.gene044361.t1.exon2;Parent=MS.gene044361.t1
chr3.3	CDS	69738429	69738572	69738429	ID=cds.MS.gene044361.t1;Parent=MS.gene044361.t1
chr3.3	exon	69738129	69738338	69738129	ID=MS.gene044361.t1.exon3;Parent=MS.gene044361.t1
chr3.3	CDS	69738129	69738338	69738129	ID=cds.MS.gene044361.t1;Parent=MS.gene044361.t1

Gene Sequence

>MS.gene044361

ATGTCGACCGAGACTCTCGTGTTTGGAGCCGCCATCCAACCTCCCCCGGAAAGCTGCTACAACAGAGGGAAGTGGCCGAAACGGGAAGCGGAACGAGAACCAGAATCTGACTCGGATTCGGAATCGGAATCGGAATCAGAATCGGAAGTAGAATCGAAAGTGAAAGTGGAATTGGACCCGTTATGGTGGGAACGGATACCATTAGAAGATCTGAAGGAGAGTGATTTCGCTAGCCGTTATGAAGATGATCCTTTTCCTTACTTTTTTACGTGTCCGAAATTTGTTTATGAGAATAAAGCTATGAGAGATAAAGAAGAGGCTAGAAAAAATGCTGTCGAAAAGTATTGGAAGGAAGCTGAGAACATAAGTGTATGTTGTTTCCCTCTCTTAATTTTAGTTTTAATTTTGTATTTAACTCTTTTAATCTGTTTCTGTTTCTGTACTCTGCTGCACAGCCCTTCGATGCCATCCCTATTCCACGCGCAGCAAATACATGTGGCAATAACTATCCCAGACCCTTTCCCATAACCCAACAACGTATCCCTCTTCTCAAACGCCTCTCCAAACTTGCTTTGGAAAAATACAATGTTGACAATCAGGTTTTAAACTACTACTTCACCAATATTGTTTTTGTTTATATCTTATTCTTTAGTTCATCCGCTTCATTGTTCTTCCTTTCTCTTATTTAGGCCAAATATGAGTTTGTCCAGCTTGTCAAGGCAACCCGTTCTCCTATTCCTCTTGGTACTTATTACATTACTTTTAAGGCAAAACAACCAATACCTCAAGTTGTTGAACCTTCCAACACCCCTGCTACAACAACTTTTCAGGCCCATGTCTGGAACAAGATATCTGGAACAACTAAGGTCAAGTCGTGTTCCATTAAAACCTCTAATTAA

Protein sequence

>MS.gene044361.t1

MSTETLVFGAAIQPPPESCYNRGKWPKREAEREPESDSDSESESESESEVESKVKVELDPLWWERIPLEDLKESDFASRYEDDPFPYFFTCPKFVYENKAMRDKEEARKNAVEKYWKEAENISPFDAIPIPRAANTCGNNYPRPFPITQQRIPLLKRLSKLALEKYNVDNQAKYEFVQLVKATRSPIPLGTYYITFKAKQPIPQVVEPSNTPATTTFQAHVWNKISGTTKVKSCSIKTSN