AlfalfaGEDB | MS.gene71284

M. sativa cultivar XinJiangDaYe / MS.gene71284

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71284.t1	RHN69093.1	59.5	173	61	5	67	238	69	233	2.40E-41	179.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71284.t1	G7J9I4	59.5	173	61	5	67	238	48	212	1.8e-41	179.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene71532	MS.gene71284	PPI
MS.gene044361	MS.gene71284	PPI
MS.gene70440	MS.gene71284	PPI
MS.gene71284	MS.gene049263	PPI
MS.gene69758	MS.gene71284	PPI
MS.gene79115	MS.gene71284	PPI
MS.gene044370	MS.gene71284	PPI
MS.gene71284	MS.gene044326	PPI
MS.gene71284	MS.gene06352	PPI
MS.gene044377	MS.gene71284	PPI
MS.gene71284	MS.gene70427	PPI
MS.gene71284	MS.gene70476	PPI
MS.gene044211	MS.gene71284	PPI
MS.gene71284	MS.gene044369	PPI
MS.gene71284	MS.gene71286	PPI
MS.gene69757	MS.gene71284	PPI
MS.gene70443	MS.gene71284	PPI
MS.gene71284	MS.gene044215	PPI
MS.gene70949	MS.gene71284	PPI
MS.gene70425	MS.gene71284	PPI
MS.gene25756	MS.gene71284	PPI
MS.gene044376	MS.gene71284	PPI
MS.gene044363	MS.gene71284	PPI
MS.gene77467	MS.gene71284	PPI
MS.gene25703	MS.gene71284	PPI
MS.gene073908	MS.gene71284	PPI
MS.gene71284	MS.gene067686	PPI
MS.gene70430	MS.gene71284	PPI
MS.gene71284	MS.gene70441	PPI
MS.gene064006	MS.gene71284	PPI
MS.gene71529	MS.gene71284	PPI
MS.gene70418	MS.gene71284	PPI
MS.gene044282	MS.gene71284	PPI
MS.gene71284	MS.gene77468	PPI
MS.gene71284	MS.gene71531	PPI
MS.gene73915	MS.gene71284	PPI
MS.gene71284	MS.gene77462	PPI
MS.gene044375	MS.gene71284	PPI
MS.gene71284	MS.gene044323	PPI
MS.gene71284	MS.gene70433	PPI
MS.gene77469	MS.gene71284	PPI
MS.gene71284	MS.gene71282	PPI
MS.gene77468	MS.gene71284	PPI
MS.gene70434	MS.gene71284	PPI
MS.gene71284	MS.gene71528	PPI
MS.gene71285	MS.gene71284	PPI
MS.gene70426	MS.gene71284	PPI
MS.gene71284	MS.gene045214	PPI
MS.gene77472	MS.gene71284	PPI
MS.gene70431	MS.gene71284	PPI
MS.gene71284	MS.gene044359	PPI
MS.gene71284	MS.gene70516	PPI
MS.gene70511	MS.gene71284	PPI
MS.gene77461	MS.gene71284	PPI
MS.gene77466	MS.gene71284	PPI
MS.gene71284	MS.gene25749	PPI
MS.gene70476	MS.gene71284	PPI
MS.gene70436	MS.gene71284	PPI
MS.gene71284	MS.gene70439	PPI
MS.gene25704	MS.gene71284	PPI
MS.gene71284	MS.gene71524	PPI
MS.gene71284	MS.gene70424	PPI
MS.gene70428	MS.gene71284	PPI
MS.gene71530	MS.gene71284	PPI
MS.gene70445	MS.gene71284	PPI
MS.gene044243	MS.gene71284	PPI
MS.gene71284	MS.gene77464	PPI
MS.gene044284	MS.gene71284	PPI
MS.gene71284	MS.gene044364	PPI
MS.gene71527	MS.gene71284	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71284.t1	MTR_3g083150	51.452	241	83	9	1	238	3	212	5.59e-55	176
MS.gene71284.t1	MTR_3g083030	38.683	243	129	11	2	239	4	231	1.21e-37	132
MS.gene71284.t1	MTR_3g083050	37.295	244	112	11	1	239	1	208	8.54e-34	121
MS.gene71284.t1	MTR_3g083100	52.632	133	49	5	117	238	45	174	1.38e-32	117
MS.gene71284.t1	MTR_3g083080	43.182	176	89	6	63	237	40	205	2.62e-29	109
MS.gene71284.t1	MTR_3g082340	37.295	244	124	12	1	237	1	222	6.87e-29	108
MS.gene71284.t1	MTR_3g082420	37.557	221	117	12	24	237	15	221	8.08e-26	100
MS.gene71284.t1	MTR_3g080680	33.005	203	113	7	45	237	9	198	1.67e-15	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 75 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTCTGTTGTAGCAGCTTTC+CGG	0.155757	3.4:+78169301	None:intergenic
TTGGGTTATGGGAAAGGGTC+TGG	0.210252	3.4:+78168836	None:intergenic
AGGGATACGTTGTTGGGTTA+TGG	0.235089	3.4:+78168824	None:intergenic
TCCGAATCCGAGTCAGATTC+TGG	0.250389	3.4:+78169247	None:intergenic
CTCTGTTGTAGCAGCTTTCC+GGG	0.261650	3.4:+78169302	None:intergenic
GTATTTGCTGCGCGTGGAAT+AGG	0.277573	3.4:+78168876	None:intergenic
GGGATACGTTGTTGGGTTAT+GGG	0.293781	3.4:+78168825	None:intergenic
TTATTCTCATAAACAAATTT+CGG	0.296115	3.4:+78169073	None:intergenic
AAGCTGGACAAACTCATATT+TGG	0.298094	3.4:+78168656	None:intergenic
TCTCGTTCCGCTTCCCGTTT+CGG	0.333023	3.4:+78169271	None:intergenic
TACCATGGTGCGTTAATTAG+AGG	0.349376	3.4:+78168458	None:intergenic
ACGCCTCTCCAAACTTGCTT+TGG	0.354815	3.4:-78168793	MS.gene71284:CDS
TGGAGAGGCGTTTGAGAAGA+GGG	0.361494	3.4:+78168805	None:intergenic
GGTTCAACAACTTGAGGTAT+TGG	0.363055	3.4:+78168570	None:intergenic
AAAATACAATGTTGACAATC+AGG	0.364241	3.4:-78168769	MS.gene71284:intron
ATCGAAAGTGAAAGTGGAAT+TGG	0.367090	3.4:-78169194	MS.gene71284:CDS
TCGACCGAGACTCTCGTGTT+TGG	0.383497	3.4:-78169343	MS.gene71284:CDS
TGGGTTATGGGAAAGGGTCT+GGG	0.394715	3.4:+78168837	None:intergenic
GAGAAGAGGGATACGTTGTT+GGG	0.411423	3.4:+78168818	None:intergenic
TAATAAGTACCAAGAGGAAT+AGG	0.423275	3.4:+78168615	None:intergenic
CTCGGATTCGGAATCGGAAT+CGG	0.425215	3.4:-78169236	MS.gene71284:CDS
ATCTGACTCGGATTCGGAAT+CGG	0.428389	3.4:-78169242	MS.gene71284:CDS
ACCAGAATCTGACTCGGATT+CGG	0.435178	3.4:-78169248	MS.gene71284:CDS
CAGAGGGAAGTGGCCGAAAC+GGG	0.441096	3.4:-78169284	MS.gene71284:CDS
TGAGAAGAGGGATACGTTGT+TGG	0.443257	3.4:+78168817	None:intergenic
CTCTCCTTCAGATCTTCTAA+TGG	0.445268	3.4:+78169148	None:intergenic
GCCTGAAAAGTTGTTGTAGC+AGG	0.449700	3.4:+78168537	None:intergenic
ACCCGTTCTCCTATTCCTCT+TGG	0.450300	3.4:-78168624	MS.gene71284:CDS
CATGTCTGGAACAAGATATC+TGG	0.451078	3.4:-78168513	MS.gene71284:CDS
AGTTGTTGTAGCAGGGGTGT+TGG	0.460802	3.4:+78168545	None:intergenic
TATTTGCTGCGCGTGGAATA+GGG	0.467085	3.4:+78168877	None:intergenic
TTGGAGAGGCGTTTGAGAAG+AGG	0.471987	3.4:+78168804	None:intergenic
AACGGGTTGCCTTGACAAGC+TGG	0.476282	3.4:+78168640	None:intergenic
AAGTGGAATTGGACCCGTTA+TGG	0.482799	3.4:-78169183	MS.gene71284:CDS
AAAATGCTGTCGAAAAGTAT+TGG	0.492089	3.4:-78169021	MS.gene71284:CDS
GTATCCGTTCCCACCATAAC+GGG	0.494522	3.4:+78169170	None:intergenic
ACCAAGAGGAATAGGAGAAC+GGG	0.497967	3.4:+78168623	None:intergenic
CAAGATATCTGGAACAACTA+AGG	0.499344	3.4:-78168502	MS.gene71284:CDS
CAGATATCTTGTTCCAGACA+TGG	0.500861	3.4:+78168514	None:intergenic
ACGTTGTTGGGTTATGGGAA+AGG	0.502825	3.4:+78168830	None:intergenic
AGCCGCCATCCAACCTCCCC+CGG	0.506131	3.4:-78169320	MS.gene71284:CDS
ACAGAGGGAAGTGGCCGAAA+CGG	0.508391	3.4:-78169285	MS.gene71284:CDS
ATCGGAATCGGAATCAGAAT+CGG	0.511451	3.4:-78169224	MS.gene71284:CDS
GTTGTAGCAGGGGTGTTGGA+AGG	0.514159	3.4:+78168549	None:intergenic
CGTTGTTGGGTTATGGGAAA+GGG	0.515504	3.4:+78168831	None:intergenic
GAAGTGGCCGAAACGGGAAG+CGG	0.529767	3.4:-78169278	MS.gene71284:CDS
GGTATCCGTTCCCACCATAA+CGG	0.532487	3.4:+78169169	None:intergenic
AGTAGAATCGAAAGTGAAAG+TGG	0.543261	3.4:-78169200	MS.gene71284:CDS
TGGAATAGGGATGGCATCGA+AGG	0.543328	3.4:+78168890	None:intergenic
AGATATCTTGTTCCAGACAT+GGG	0.545976	3.4:+78168515	None:intergenic
GAAAAGGATCATCTTCATAA+CGG	0.546737	3.4:+78169113	None:intergenic
GGCTCCAAACACGAGAGTCT+CGG	0.559644	3.4:+78169339	None:intergenic
TGGAATTGGACCCGTTATGG+TGG	0.566427	3.4:-78169180	MS.gene71284:CDS
TCTGTTGTAGCAGCTTTCCG+GGG	0.568607	3.4:+78169303	None:intergenic
TACCAAGAGGAATAGGAGAA+CGG	0.570966	3.4:+78168622	None:intergenic
TGCTGTCGAAAAGTATTGGA+AGG	0.572056	3.4:-78169017	MS.gene71284:CDS
GATACCATTAGAAGATCTGA+AGG	0.573494	3.4:-78169152	MS.gene71284:CDS
TTGGAAGGTTCAACAACTTG+AGG	0.575752	3.4:+78168564	None:intergenic
TGGACCCGTTATGGTGGGAA+CGG	0.578043	3.4:-78169174	MS.gene71284:CDS
CGGAAAGCTGCTACAACAGA+GGG	0.584202	3.4:-78169300	MS.gene71284:CDS
TGAGTTTGTCCAGCTTGTCA+AGG	0.586521	3.4:-78168649	MS.gene71284:CDS
CCGGAAAGCTGCTACAACAG+AGG	0.589302	3.4:-78169301	MS.gene71284:CDS
CCTGAAAAGTTGTTGTAGCA+GGG	0.590814	3.4:+78168538	None:intergenic
CTGAAAAGTTGTTGTAGCAG+GGG	0.591211	3.4:+78168539	None:intergenic
GCTGCTACAACAGAGGGAAG+TGG	0.596216	3.4:-78169294	MS.gene71284:CDS
CCACATGTATTTGCTGCGCG+TGG	0.600455	3.4:+78168870	None:intergenic
TTTCCAAAGCAAGTTTGGAG+AGG	0.618640	3.4:+78168790	None:intergenic
TGCTGCGCGTGGAATAGGGA+TGG	0.619194	3.4:+78168881	None:intergenic
AGCTATGAGAGATAAAGAAG+AGG	0.620914	3.4:-78169050	MS.gene71284:CDS
GGAATAGGGATGGCATCGAA+GGG	0.630858	3.4:+78168891	None:intergenic
GGAATTGGACCCGTTATGGT+GGG	0.637797	3.4:-78169179	MS.gene71284:CDS
CTGTTGTAGCAGCTTTCCGG+GGG	0.645513	3.4:+78169304	None:intergenic
ACGAGAACCAGAATCTGACT+CGG	0.655126	3.4:-78169254	MS.gene71284:CDS
GTAATGTAATAAGTACCAAG+AGG	0.663480	3.4:+78168609	None:intergenic
CCACGCGCAGCAAATACATG+TGG	0.685685	3.4:-78168870	MS.gene71284:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAAACAAAAATTAAGAG+AGG	+	chr3.4:78168854-78168873	None:intergenic	15.0%
!!	GATATAAACAAAAACAATAT+TGG	+	chr3.4:78169091-78169110	None:intergenic	15.0%
!!	TTAAAACAAAAATTAAGAGA+GGG	+	chr3.4:78168853-78168872	None:intergenic	15.0%
!!	TTATTCTCATAAACAAATTT+CGG	+	chr3.4:78168746-78168765	None:intergenic	15.0%
!!!	TACTTATTACATTACTTTTA+AGG	-	chr3.4:78169215-78169234	MS.gene71284:CDS	15.0%
!	AAAATACAATGTTGACAATC+AGG	-	chr3.4:78169047-78169066	MS.gene71284:CDS	25.0%
	ATTTGGCCTAAATAAGAGAA+AGG	+	chr3.4:78169146-78169165	None:intergenic	30.0%
	CACGTAAAAAAGTAAGGAAA+AGG	+	chr3.4:78168722-78168741	None:intergenic	30.0%
	GAAAAGGATCATCTTCATAA+CGG	+	chr3.4:78168706-78168725	None:intergenic	30.0%
	GTAATGTAATAAGTACCAAG+AGG	+	chr3.4:78169210-78169229	None:intergenic	30.0%
	TAATAAGTACCAAGAGGAAT+AGG	+	chr3.4:78169204-78169223	None:intergenic	30.0%
!	AAAATGCTGTCGAAAAGTAT+TGG	-	chr3.4:78168795-78168814	MS.gene71284:CDS	30.0%
!	GTATTTTTCCAAAGCAAGTT+TGG	+	chr3.4:78169034-78169053	None:intergenic	30.0%
!	GTTCTTCCTTTCTCTTATTT+AGG	-	chr3.4:78169137-78169156	MS.gene71284:CDS	30.0%
	AAGCTGGACAAACTCATATT+TGG	+	chr3.4:78169163-78169182	None:intergenic	35.0%
	AGAAAGGAAGAACAATGAAG+CGG	+	chr3.4:78169130-78169149	None:intergenic	35.0%
	AGATATCTTGTTCCAGACAT+GGG	+	chr3.4:78169304-78169323	None:intergenic	35.0%
	AGCTATGAGAGATAAAGAAG+AGG	-	chr3.4:78168766-78168785	MS.gene71284:intron	35.0%
	AGTAGAATCGAAAGTGAAAG+TGG	-	chr3.4:78168616-78168635	MS.gene71284:CDS	35.0%
	ATCGAAAGTGAAAGTGGAAT+TGG	-	chr3.4:78168622-78168641	MS.gene71284:CDS	35.0%
	GATACCATTAGAAGATCTGA+AGG	-	chr3.4:78168664-78168683	MS.gene71284:intron	35.0%
	TTCGGACACGTAAAAAAGTA+AGG	+	chr3.4:78168728-78168747	None:intergenic	35.0%
!	CAAGATATCTGGAACAACTA+AGG	-	chr3.4:78169314-78169333	MS.gene71284:CDS	35.0%
	ATCGGAATCGGAATCAGAAT+CGG	-	chr3.4:78168592-78168611	MS.gene71284:CDS	40.0%
	CAGATATCTTGTTCCAGACA+TGG	+	chr3.4:78169305-78169324	None:intergenic	40.0%
	CCTGAAAAGTTGTTGTAGCA+GGG	+	chr3.4:78169281-78169300	None:intergenic	40.0%
	CTCTCCTTCAGATCTTCTAA+TGG	+	chr3.4:78168671-78168690	None:intergenic	40.0%
	CTGAAAAGTTGTTGTAGCAG+GGG	+	chr3.4:78169280-78169299	None:intergenic	40.0%
	GGTTCAACAACTTGAGGTAT+TGG	+	chr3.4:78169249-78169268	None:intergenic	40.0%
	TACCAAGAGGAATAGGAGAA+CGG	+	chr3.4:78169197-78169216	None:intergenic	40.0%
	TTGGAAGGTTCAACAACTTG+AGG	+	chr3.4:78169255-78169274	None:intergenic	40.0%
	TTTCCAAAGCAAGTTTGGAG+AGG	+	chr3.4:78169029-78169048	None:intergenic	40.0%
!	CATGTCTGGAACAAGATATC+TGG	-	chr3.4:78169303-78169322	MS.gene71284:CDS	40.0%
!!	TGCTGTCGAAAAGTATTGGA+AGG	-	chr3.4:78168799-78168818	MS.gene71284:CDS	40.0%
	AAGTGGAATTGGACCCGTTA+TGG	-	chr3.4:78168633-78168652	MS.gene71284:CDS	45.0%
	ACCAAGAGGAATAGGAGAAC+GGG	+	chr3.4:78169196-78169215	None:intergenic	45.0%
	ACGAGAACCAGAATCTGACT+CGG	-	chr3.4:78168562-78168581	MS.gene71284:CDS	45.0%
	ACGTTGTTGGGTTATGGGAA+AGG	+	chr3.4:78168989-78169008	None:intergenic	45.0%
	AGGGATACGTTGTTGGGTTA+TGG	+	chr3.4:78168995-78169014	None:intergenic	45.0%
	CGTTGTTGGGTTATGGGAAA+GGG	+	chr3.4:78168988-78169007	None:intergenic	45.0%
	GAGAAGAGGGATACGTTGTT+GGG	+	chr3.4:78169001-78169020	None:intergenic	45.0%
	GCCTGAAAAGTTGTTGTAGC+AGG	+	chr3.4:78169282-78169301	None:intergenic	45.0%
	GGGATACGTTGTTGGGTTAT+GGG	+	chr3.4:78168994-78169013	None:intergenic	45.0%
	TGAGAAGAGGGATACGTTGT+TGG	+	chr3.4:78169002-78169021	None:intergenic	45.0%
	TGAGTTTGTCCAGCTTGTCA+AGG	-	chr3.4:78169167-78169186	MS.gene71284:CDS	45.0%
!	CCCTGCTACAACAACTTTTC+AGG	-	chr3.4:78169278-78169297	MS.gene71284:CDS	45.0%
!	TATTTGCTGCGCGTGGAATA+GGG	+	chr3.4:78168942-78168961	None:intergenic	45.0%
!!	ACCAGAATCTGACTCGGATT+CGG	-	chr3.4:78168568-78168587	MS.gene71284:CDS	45.0%
!!	ATCTGACTCGGATTCGGAAT+CGG	-	chr3.4:78168574-78168593	MS.gene71284:CDS	45.0%
	ACCCGTTCTCCTATTCCTCT+TGG	-	chr3.4:78169192-78169211	MS.gene71284:CDS	50.0%
	CCTCTGTTGTAGCAGCTTTC+CGG	+	chr3.4:78168518-78168537	None:intergenic	50.0%
	CGGAAAGCTGCTACAACAGA+GGG	-	chr3.4:78168516-78168535	MS.gene71284:CDS	50.0%
	CTCGGATTCGGAATCGGAAT+CGG	-	chr3.4:78168580-78168599	MS.gene71284:CDS	50.0%
	CTCTGTTGTAGCAGCTTTCC+GGG	+	chr3.4:78168517-78168536	None:intergenic	50.0%
	GGAATTGGACCCGTTATGGT+GGG	-	chr3.4:78168637-78168656	MS.gene71284:CDS	50.0%
	GGTATCCGTTCCCACCATAA+CGG	+	chr3.4:78168650-78168669	None:intergenic	50.0%
	GTATCCGTTCCCACCATAAC+GGG	+	chr3.4:78168649-78168668	None:intergenic	50.0%
	TCCGAATCCGAGTCAGATTC+TGG	+	chr3.4:78168572-78168591	None:intergenic	50.0%
	TCTGTTGTAGCAGCTTTCCG+GGG	+	chr3.4:78168516-78168535	None:intergenic	50.0%
	TGGAATTGGACCCGTTATGG+TGG	-	chr3.4:78168636-78168655	MS.gene71284:CDS	50.0%
	TGGGTTATGGGAAAGGGTCT+GGG	+	chr3.4:78168982-78169001	None:intergenic	50.0%
	TTGGGTTATGGGAAAGGGTC+TGG	+	chr3.4:78168983-78169002	None:intergenic	50.0%
!	ACGCCTCTCCAAACTTGCTT+TGG	-	chr3.4:78169023-78169042	MS.gene71284:CDS	50.0%
!	AGTTGTTGTAGCAGGGGTGT+TGG	+	chr3.4:78169274-78169293	None:intergenic	50.0%
!	GGAATAGGGATGGCATCGAA+GGG	+	chr3.4:78168928-78168947	None:intergenic	50.0%
!	GTATTTGCTGCGCGTGGAAT+AGG	+	chr3.4:78168943-78168962	None:intergenic	50.0%
!	TGGAATAGGGATGGCATCGA+AGG	+	chr3.4:78168929-78168948	None:intergenic	50.0%
!!	CAACTTTTCAGGCCCATGTC+TGG	-	chr3.4:78169289-78169308	MS.gene71284:CDS	50.0%
!!	TGGAGAGGCGTTTGAGAAGA+GGG	+	chr3.4:78169014-78169033	None:intergenic	50.0%
!!	TTGGAGAGGCGTTTGAGAAG+AGG	+	chr3.4:78169015-78169034	None:intergenic	50.0%
	ACAGAGGGAAGTGGCCGAAA+CGG	-	chr3.4:78168531-78168550	MS.gene71284:CDS	55.0%
	CCACGCGCAGCAAATACATG+TGG	-	chr3.4:78168946-78168965	MS.gene71284:intron	55.0%
	CCGGAAAGCTGCTACAACAG+AGG	-	chr3.4:78168515-78168534	MS.gene71284:CDS	55.0%
	CTGTTGTAGCAGCTTTCCGG+GGG	+	chr3.4:78168515-78168534	None:intergenic	55.0%
	GCTGCTACAACAGAGGGAAG+TGG	-	chr3.4:78168522-78168541	MS.gene71284:CDS	55.0%
	GGCTCCAAACACGAGAGTCT+CGG	+	chr3.4:78168480-78168499	None:intergenic	55.0%
	TCGACCGAGACTCTCGTGTT+TGG	-	chr3.4:78168473-78168492	MS.gene71284:CDS	55.0%
	TCTCGTTCCGCTTCCCGTTT+CGG	+	chr3.4:78168548-78168567	None:intergenic	55.0%
!	CCACATGTATTTGCTGCGCG+TGG	+	chr3.4:78168949-78168968	None:intergenic	55.0%
!	TGGACCCGTTATGGTGGGAA+CGG	-	chr3.4:78168642-78168661	MS.gene71284:CDS	55.0%
!!	AACGGGTTGCCTTGACAAGC+TGG	+	chr3.4:78169179-78169198	None:intergenic	55.0%
!!	GTTGTAGCAGGGGTGTTGGA+AGG	+	chr3.4:78169270-78169289	None:intergenic	55.0%
	CAGAGGGAAGTGGCCGAAAC+GGG	-	chr3.4:78168532-78168551	MS.gene71284:CDS	60.0%
	GAAGTGGCCGAAACGGGAAG+CGG	-	chr3.4:78168538-78168557	MS.gene71284:CDS	60.0%
	TGCTGCGCGTGGAATAGGGA+TGG	+	chr3.4:78168938-78168957	None:intergenic	60.0%
	TTGTAGCAGCTTTCCGGGGG+AGG	+	chr3.4:78168512-78168531	None:intergenic	60.0%
	AGCAGCTTTCCGGGGGAGGT+TGG	+	chr3.4:78168508-78168527	None:intergenic	65.0%
	GCTTTCCGGGGGAGGTTGGA+TGG	+	chr3.4:78168504-78168523	None:intergenic	65.0%
	TTCCGGGGGAGGTTGGATGG+CGG	+	chr3.4:78168501-78168520	None:intergenic	65.0%
	AGCCGCCATCCAACCTCCCC+CGG	-	chr3.4:78168496-78168515	MS.gene71284:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	78168470	78169368	78168470	ID=MS.gene71284
chr3.4	mRNA	78168470	78169368	78168470	ID=MS.gene71284.t1;Parent=MS.gene71284
chr3.4	exon	78169000	78169368	78169000	ID=MS.gene71284.t1.exon1;Parent=MS.gene71284.t1
chr3.4	CDS	78169000	78169368	78169000	ID=cds.MS.gene71284.t1;Parent=MS.gene71284.t1
chr3.4	exon	78168770	78168913	78168770	ID=MS.gene71284.t1.exon2;Parent=MS.gene71284.t1
chr3.4	CDS	78168770	78168913	78168770	ID=cds.MS.gene71284.t1;Parent=MS.gene71284.t1
chr3.4	exon	78168470	78168679	78168470	ID=MS.gene71284.t1.exon3;Parent=MS.gene71284.t1
chr3.4	CDS	78168470	78168679	78168470	ID=cds.MS.gene71284.t1;Parent=MS.gene71284.t1

Gene Sequence

>MS.gene71284

ATGTCGACCGAGACTCTCGTGTTTGGAGCCGCCATCCAACCTCCCCCGGAAAGCTGCTACAACAGAGGGAAGTGGCCGAAACGGGAAGCGGAACGAGAACCAGAATCTGACTCGGATTCGGAATCGGAATCGGAATCAGAATCGGAAGTAGAATCGAAAGTGAAAGTGGAATTGGACCCGTTATGGTGGGAACGGATACCATTAGAAGATCTGAAGGAGAGTGATTTCGCTAGCCGTTATGAAGATGATCCTTTTCCTTACTTTTTTACGTGTCCGAAATTTGTTTATGAGAATAAAGCTATGAGAGATAAAGAAGAGGCTAGAAAAAATGCTGTCGAAAAGTATTGGAAGGAAGCTGAGAACATAAGTGTATGTTGTTTCCCTCTCTTAATTTTTGTTTTAATTTTGTATTTAACTCTTTTAATCTGTTTCTGTTTCTGTACTCTGCTGCACAGCCCTTCGATGCCATCCCTATTCCACGCGCAGCAAATACATGTGGCAATAACTATCCCAGACCCTTTCCCATAACCCAACAACGTATCCCTCTTCTCAAACGCCTCTCCAAACTTGCTTTGGAAAAATACAATGTTGACAATCAGGTTTTAAACTACTACTTCACCAATATTGTTTTTGTTTATATCTTATTCTTTAGTTCATCCGCTTCATTGTTCTTCCTTTCTCTTATTTAGGCCAAATATGAGTTTGTCCAGCTTGTCAAGGCAACCCGTTCTCCTATTCCTCTTGGTACTTATTACATTACTTTTAAGGCAAAACAACCAATACCTCAAGTTGTTGAACCTTCCAACACCCCTGCTACAACAACTTTTCAGGCCCATGTCTGGAACAAGATATCTGGAACAACTAAGGTCAAGTCGTGTTCCATTAAAACCTCTAATTAA

Protein sequence

>MS.gene71284.t1

MSTETLVFGAAIQPPPESCYNRGKWPKREAEREPESDSDSESESESESEVESKVKVELDPLWWERIPLEDLKESDFASRYEDDPFPYFFTCPKFVYENKAMRDKEEARKNAVEKYWKEAENISPFDAIPIPRAANTCGNNYPRPFPITQQRIPLLKRLSKLALEKYNVDNQAKYEFVQLVKATRSPIPLGTYYITFKAKQPIPQVVEPSNTPATTTFQAHVWNKISGTTKVKSCSIKTSN