AlfalfaGEDB | MS.gene70443

M. sativa cultivar XinJiangDaYe / MS.gene70443

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70443.t1	RHN69093.1	50.8	199	63	6	67	264	69	233	2.60E-36	162.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70443.t1	G7J9I4	50.8	199	63	6	67	264	48	212	1.9e-36	162.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene71532	MS.gene70443	PPI
MS.gene70443	MS.gene70440	PPI
MS.gene70443	MS.gene77467	PPI
MS.gene70443	MS.gene25704	PPI
MS.gene70443	MS.gene77468	PPI
MS.gene70443	MS.gene71531	PPI
MS.gene70443	MS.gene69757	PPI
MS.gene70443	MS.gene77462	PPI
MS.gene70443	MS.gene044211	PPI
MS.gene70443	MS.gene044323	PPI
MS.gene70443	MS.gene044284	PPI
MS.gene70443	MS.gene70433	PPI
MS.gene70443	MS.gene71282	PPI
MS.gene064006	MS.gene70443	PPI
MS.gene70443	MS.gene70431	PPI
MS.gene70443	MS.gene71284	PPI
MS.gene70443	MS.gene044376	PPI
MS.gene70443	MS.gene70430	PPI
MS.gene70443	MS.gene045214	PPI
MS.gene70443	MS.gene70441	PPI
MS.gene044363	MS.gene70443	PPI
MS.gene70443	MS.gene25703	PPI
MS.gene70443	MS.gene77466	PPI
MS.gene70443	MS.gene044361	PPI
MS.gene70443	MS.gene70516	PPI
MS.gene70443	MS.gene77469	PPI
MS.gene70443	MS.gene70425	PPI
MS.gene70443	MS.gene25749	PPI
MS.gene77472	MS.gene70443	PPI
MS.gene70443	MS.gene69758	PPI
MS.gene70418	MS.gene70443	PPI
MS.gene70443	MS.gene70949	PPI
MS.gene70443	MS.gene71524	PPI
MS.gene70443	MS.gene71528	PPI
MS.gene70443	MS.gene044375	PPI
MS.gene70443	MS.gene70424	PPI
MS.gene70511	MS.gene70443	PPI
MS.gene70443	MS.gene067686	PPI
MS.gene73915	MS.gene70443	PPI
MS.gene70443	MS.gene77464	PPI
MS.gene70443	MS.gene71529	PPI
MS.gene70443	MS.gene044364	PPI
MS.gene70443	MS.gene044359	PPI
MS.gene70443	MS.gene71285	PPI
MS.gene70443	MS.gene70436	PPI
MS.gene70443	MS.gene044370	PPI
MS.gene70443	MS.gene044326	PPI
MS.gene70443	MS.gene06352	PPI
MS.gene70443	MS.gene70439	PPI
MS.gene70443	MS.gene79115	PPI
MS.gene70443	MS.gene70434	PPI
MS.gene70443	MS.gene70428	PPI
MS.gene70443	MS.gene70427	PPI
MS.gene70443	MS.gene70476	PPI
MS.gene70443	MS.gene70445	PPI
MS.gene70443	MS.gene044369	PPI
MS.gene70443	MS.gene71286	PPI
MS.gene70443	MS.gene77461	PPI
MS.gene70443	MS.gene044215	PPI
MS.gene70443	MS.gene044377	PPI
MS.gene70443	MS.gene70426	PPI
MS.gene70443	MS.gene70418	PPI
MS.gene70443	MS.gene71530	PPI
MS.gene70443	MS.gene25756	PPI
MS.gene70443	MS.gene044282	PPI
MS.gene70443	MS.gene049263	PPI
MS.gene70443	MS.gene073908	PPI
MS.gene044243	MS.gene70443	PPI
MS.gene71527	MS.gene70443	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70443.t1	MTR_3g083150	45.693	267	85	10	1	264	3	212	5.18e-48	159
MS.gene70443.t1	MTR_3g083030	34.572	269	130	12	2	265	4	231	4.02e-31	115
MS.gene70443.t1	MTR_3g083100	53.968	126	44	5	150	264	52	174	1.48e-30	112
MS.gene70443.t1	MTR_3g083050	33.333	270	113	12	1	265	1	208	2.65e-27	105
MS.gene70443.t1	MTR_3g082340	32.963	270	126	11	1	263	1	222	5.88e-23	94.0
MS.gene70443.t1	MTR_3g083080	37.129	202	90	7	63	263	40	205	1.21e-22	92.8
MS.gene70443.t1	MTR_3g082420	33.603	247	117	12	24	263	15	221	3.45e-20	86.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 75 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTCTGTTGTAGCAGCTTTC+CGG	0.155757	3.1:-66388203	None:intergenic
TTGGGTTATGGGAAAGGGTC+TGG	0.210252	3.1:-66388660	None:intergenic
AGGGATACGTTGTTGGGTTA+TGG	0.235089	3.1:-66388672	None:intergenic
TCCGAATCCGAGTCAGATTC+TGG	0.250389	3.1:-66388257	None:intergenic
CTCTGTTGTAGCAGCTTTCC+GGG	0.261650	3.1:-66388202	None:intergenic
GGGATACGTTGTTGGGTTAT+GGG	0.293781	3.1:-66388671	None:intergenic
TTATTCTCATAAACAAATTT+CGG	0.296115	3.1:-66388431	None:intergenic
AAGCTGGACAAACTCATATT+TGG	0.298094	3.1:-66388846	None:intergenic
TCTCGTTCCGCTTCCCGTTT+CGG	0.333023	3.1:-66388233	None:intergenic
GTATTTGCTGCGCGTGGAAT+CGG	0.335426	3.1:-66388620	None:intergenic
TACCATGGTGCGTTAATTAG+AGG	0.349376	3.1:-66389044	None:intergenic
ACGCCTCTCCAAACTTGCTT+TGG	0.354815	3.1:+66388703	MS.gene70443:CDS
TGGAGAGGCGTTTGAGAAGA+GGG	0.361494	3.1:-66388691	None:intergenic
GGTTCAACAACTTGAGGTAT+TGG	0.363055	3.1:-66388932	None:intergenic
AAAATACAATGTTGACAATC+AGG	0.364241	3.1:+66388727	MS.gene70443:CDS
ATCGAAAGTGAAAGTGGAAT+TGG	0.367090	3.1:+66388310	MS.gene70443:CDS
TCGACCGAGACTCTCGTGTT+TGG	0.383497	3.1:+66388161	MS.gene70443:CDS
TGGGTTATGGGAAAGGGTCT+GGG	0.394715	3.1:-66388659	None:intergenic
GAGAAGAGGGATACGTTGTT+GGG	0.411423	3.1:-66388678	None:intergenic
TAATAAGTACCAAGAGGAAT+AGG	0.423275	3.1:-66388887	None:intergenic
CTCGGATTCGGAATCGGAAT+CGG	0.425215	3.1:+66388268	MS.gene70443:CDS
ATCTGACTCGGATTCGGAAT+CGG	0.428389	3.1:+66388262	MS.gene70443:CDS
ACCAGAATCTGACTCGGATT+CGG	0.435178	3.1:+66388256	MS.gene70443:CDS
CAGAGGGAAGTGGCCGAAAC+GGG	0.441096	3.1:+66388220	MS.gene70443:CDS
TGAGAAGAGGGATACGTTGT+TGG	0.443257	3.1:-66388679	None:intergenic
CTCTCCTTCAGATCTTCTAA+TGG	0.445268	3.1:-66388356	None:intergenic
TATTTGCTGCGCGTGGAATC+GGG	0.448022	3.1:-66388619	None:intergenic
GCCTGAAAAGTTGTTGTAGC+AGG	0.449700	3.1:-66388965	None:intergenic
ACCCGTTCTCCTATTCCTCT+TGG	0.450300	3.1:+66388878	MS.gene70443:CDS
CATGTCTGGAACAAGATATC+TGG	0.451078	3.1:+66388989	MS.gene70443:CDS
AGTTGTTGTAGCAGGGGTGT+TGG	0.460802	3.1:-66388957	None:intergenic
TTGGAGAGGCGTTTGAGAAG+AGG	0.471987	3.1:-66388692	None:intergenic
AACGGGTTGCCTTGACAAGC+TGG	0.476282	3.1:-66388862	None:intergenic
AAGTGGAATTGGACCCGTTA+TGG	0.482799	3.1:+66388321	MS.gene70443:CDS
AAAATGCTGTCGAAAAGTAT+TGG	0.492089	3.1:+66388483	MS.gene70443:CDS
GTATCCGTTCCCACCATAAC+GGG	0.494522	3.1:-66388334	None:intergenic
ACCAAGAGGAATAGGAGAAC+GGG	0.497967	3.1:-66388879	None:intergenic
CAAGATATCTGGAACAACTA+AGG	0.499344	3.1:+66389000	MS.gene70443:CDS
CAGATATCTTGTTCCAGACA+TGG	0.500861	3.1:-66388988	None:intergenic
ACGTTGTTGGGTTATGGGAA+AGG	0.502825	3.1:-66388666	None:intergenic
AGCCGCCATCCAACCTCCCC+CGG	0.506131	3.1:+66388184	MS.gene70443:CDS
ACAGAGGGAAGTGGCCGAAA+CGG	0.508391	3.1:+66388219	MS.gene70443:CDS
ATCGGAATCGGAATCAGAAT+CGG	0.511451	3.1:+66388280	MS.gene70443:CDS
GTTGTAGCAGGGGTGTTGGA+AGG	0.514159	3.1:-66388953	None:intergenic
CGTTGTTGGGTTATGGGAAA+GGG	0.515504	3.1:-66388665	None:intergenic
GAAGTGGCCGAAACGGGAAG+CGG	0.529767	3.1:+66388226	MS.gene70443:CDS
GGTATCCGTTCCCACCATAA+CGG	0.532487	3.1:-66388335	None:intergenic
TGGAATCGGGATGGCATCGA+AGG	0.539991	3.1:-66388606	None:intergenic
AGTAGAATCGAAAGTGAAAG+TGG	0.543261	3.1:+66388304	MS.gene70443:CDS
AGATATCTTGTTCCAGACAT+GGG	0.545976	3.1:-66388987	None:intergenic
GAAAAGGATCATCTTCATAA+CGG	0.546737	3.1:-66388391	None:intergenic
GGCTCCAAACACGAGAGTCT+CGG	0.559644	3.1:-66388165	None:intergenic
TGGAATTGGACCCGTTATGG+TGG	0.566427	3.1:+66388324	MS.gene70443:CDS
TCTGTTGTAGCAGCTTTCCG+GGG	0.568607	3.1:-66388201	None:intergenic
TACCAAGAGGAATAGGAGAA+CGG	0.570966	3.1:-66388880	None:intergenic
TGCTGTCGAAAAGTATTGGA+AGG	0.572056	3.1:+66388487	MS.gene70443:CDS
GATACCATTAGAAGATCTGA+AGG	0.573494	3.1:+66388352	MS.gene70443:CDS
TTGGAAGGTTCAACAACTTG+AGG	0.575752	3.1:-66388938	None:intergenic
TGGACCCGTTATGGTGGGAA+CGG	0.578043	3.1:+66388330	MS.gene70443:CDS
CGGAAAGCTGCTACAACAGA+GGG	0.584202	3.1:+66388204	MS.gene70443:CDS
TGAGTTTGTCCAGCTTGTCA+AGG	0.586521	3.1:+66388853	MS.gene70443:CDS
CCGGAAAGCTGCTACAACAG+AGG	0.589302	3.1:+66388203	MS.gene70443:CDS
CCTGAAAAGTTGTTGTAGCA+GGG	0.590814	3.1:-66388964	None:intergenic
CTGAAAAGTTGTTGTAGCAG+GGG	0.591211	3.1:-66388963	None:intergenic
GCTGCTACAACAGAGGGAAG+TGG	0.596216	3.1:+66388210	MS.gene70443:CDS
CCACATGTATTTGCTGCGCG+TGG	0.600455	3.1:-66388626	None:intergenic
TTTCCAAAGCAAGTTTGGAG+AGG	0.618640	3.1:-66388706	None:intergenic
GGAATCGGGATGGCATCGAA+GGG	0.620758	3.1:-66388605	None:intergenic
AGCTATGAGAGATAAAGAAG+AGG	0.620914	3.1:+66388454	MS.gene70443:CDS
TGCTGCGCGTGGAATCGGGA+TGG	0.624872	3.1:-66388615	None:intergenic
GGAATTGGACCCGTTATGGT+GGG	0.637797	3.1:+66388325	MS.gene70443:CDS
CTGTTGTAGCAGCTTTCCGG+GGG	0.645513	3.1:-66388200	None:intergenic
ACGAGAACCAGAATCTGACT+CGG	0.655126	3.1:+66388250	MS.gene70443:CDS
GTAATGTAATAAGTACCAAG+AGG	0.663480	3.1:-66388893	None:intergenic
CCACGCGCAGCAAATACATG+TGG	0.685685	3.1:+66388626	MS.gene70443:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAATAAGATATAAACAA+TGG	-	chr3.1:66388780-66388799	None:intergenic	10.0%
!!	ATTAAAACAAAAATTAAGAG+AGG	-	chr3.1:66388534-66388553	None:intergenic	15.0%
!!	TTAAAACAAAAATTAAGAGA+GGG	-	chr3.1:66388533-66388552	None:intergenic	15.0%
!!	TTATTCTCATAAACAAATTT+CGG	-	chr3.1:66388434-66388453	None:intergenic	15.0%
!!!	TACTTATTACATTACTTTTA+AGG	+	chr3.1:66388901-66388920	MS.gene70443:CDS	15.0%
!!	AAATAAGATATAAACAATGG+TGG	-	chr3.1:66388777-66388796	None:intergenic	20.0%
!	AAAATACAATGTTGACAATC+AGG	+	chr3.1:66388727-66388746	MS.gene70443:CDS	25.0%
!!	TCTTTCTGTTTCTCTTATTT+AGG	+	chr3.1:66388823-66388842	MS.gene70443:intron	25.0%
	AGAAACAGAAAGAACAATGA+AGG	-	chr3.1:66388816-66388835	None:intergenic	30.0%
	CACGTAAAAAAGTAAGGAAA+AGG	-	chr3.1:66388410-66388429	None:intergenic	30.0%
	GAAAAGGATCATCTTCATAA+CGG	-	chr3.1:66388394-66388413	None:intergenic	30.0%
	GTAATGTAATAAGTACCAAG+AGG	-	chr3.1:66388896-66388915	None:intergenic	30.0%
	TAATAAGTACCAAGAGGAAT+AGG	-	chr3.1:66388890-66388909	None:intergenic	30.0%
!	AAAATGCTGTCGAAAAGTAT+TGG	+	chr3.1:66388483-66388502	MS.gene70443:CDS	30.0%
!	GTATTTTTCCAAAGCAAGTT+TGG	-	chr3.1:66388714-66388733	None:intergenic	30.0%
	AAGCTGGACAAACTCATATT+TGG	-	chr3.1:66388849-66388868	None:intergenic	35.0%
	AGATATCTTGTTCCAGACAT+GGG	-	chr3.1:66388990-66389009	None:intergenic	35.0%
	AGCTATGAGAGATAAAGAAG+AGG	+	chr3.1:66388454-66388473	MS.gene70443:CDS	35.0%
	AGTAGAATCGAAAGTGAAAG+TGG	+	chr3.1:66388304-66388323	MS.gene70443:CDS	35.0%
	ATCGAAAGTGAAAGTGGAAT+TGG	+	chr3.1:66388310-66388329	MS.gene70443:CDS	35.0%
	GATACCATTAGAAGATCTGA+AGG	+	chr3.1:66388352-66388371	MS.gene70443:CDS	35.0%
	TTCGGACACGTAAAAAAGTA+AGG	-	chr3.1:66388416-66388435	None:intergenic	35.0%
!	CAAGATATCTGGAACAACTA+AGG	+	chr3.1:66389000-66389019	MS.gene70443:CDS	35.0%
	ATCGGAATCGGAATCAGAAT+CGG	+	chr3.1:66388280-66388299	MS.gene70443:CDS	40.0%
	CAGATATCTTGTTCCAGACA+TGG	-	chr3.1:66388991-66389010	None:intergenic	40.0%
	CCTGAAAAGTTGTTGTAGCA+GGG	-	chr3.1:66388967-66388986	None:intergenic	40.0%
	CTCTCCTTCAGATCTTCTAA+TGG	-	chr3.1:66388359-66388378	None:intergenic	40.0%
	CTGAAAAGTTGTTGTAGCAG+GGG	-	chr3.1:66388966-66388985	None:intergenic	40.0%
	GGTTCAACAACTTGAGGTAT+TGG	-	chr3.1:66388935-66388954	None:intergenic	40.0%
	TACCAAGAGGAATAGGAGAA+CGG	-	chr3.1:66388883-66388902	None:intergenic	40.0%
	TTGGAAGGTTCAACAACTTG+AGG	-	chr3.1:66388941-66388960	None:intergenic	40.0%
	TTTCCAAAGCAAGTTTGGAG+AGG	-	chr3.1:66388709-66388728	None:intergenic	40.0%
!	CATGTCTGGAACAAGATATC+TGG	+	chr3.1:66388989-66389008	MS.gene70443:CDS	40.0%
!!	TGCTGTCGAAAAGTATTGGA+AGG	+	chr3.1:66388487-66388506	MS.gene70443:CDS	40.0%
	AAGTGGAATTGGACCCGTTA+TGG	+	chr3.1:66388321-66388340	MS.gene70443:CDS	45.0%
	ACCAAGAGGAATAGGAGAAC+GGG	-	chr3.1:66388882-66388901	None:intergenic	45.0%
	ACGAGAACCAGAATCTGACT+CGG	+	chr3.1:66388250-66388269	MS.gene70443:CDS	45.0%
	ACGTTGTTGGGTTATGGGAA+AGG	-	chr3.1:66388669-66388688	None:intergenic	45.0%
	AGGGATACGTTGTTGGGTTA+TGG	-	chr3.1:66388675-66388694	None:intergenic	45.0%
	CGTTGTTGGGTTATGGGAAA+GGG	-	chr3.1:66388668-66388687	None:intergenic	45.0%
	GAGAAGAGGGATACGTTGTT+GGG	-	chr3.1:66388681-66388700	None:intergenic	45.0%
	GCCTGAAAAGTTGTTGTAGC+AGG	-	chr3.1:66388968-66388987	None:intergenic	45.0%
	GGGATACGTTGTTGGGTTAT+GGG	-	chr3.1:66388674-66388693	None:intergenic	45.0%
	TGAGAAGAGGGATACGTTGT+TGG	-	chr3.1:66388682-66388701	None:intergenic	45.0%
	TGAGTTTGTCCAGCTTGTCA+AGG	+	chr3.1:66388853-66388872	MS.gene70443:CDS	45.0%
!	CCCTGCTACAACAACTTTTC+AGG	+	chr3.1:66388964-66388983	MS.gene70443:CDS	45.0%
!!	ACCAGAATCTGACTCGGATT+CGG	+	chr3.1:66388256-66388275	MS.gene70443:CDS	45.0%
!!	ATCTGACTCGGATTCGGAAT+CGG	+	chr3.1:66388262-66388281	MS.gene70443:CDS	45.0%
	ACCCGTTCTCCTATTCCTCT+TGG	+	chr3.1:66388878-66388897	MS.gene70443:CDS	50.0%
	CCTCTGTTGTAGCAGCTTTC+CGG	-	chr3.1:66388206-66388225	None:intergenic	50.0%
	CGGAAAGCTGCTACAACAGA+GGG	+	chr3.1:66388204-66388223	MS.gene70443:CDS	50.0%
	CTCGGATTCGGAATCGGAAT+CGG	+	chr3.1:66388268-66388287	MS.gene70443:CDS	50.0%
	CTCTGTTGTAGCAGCTTTCC+GGG	-	chr3.1:66388205-66388224	None:intergenic	50.0%
	GGAATTGGACCCGTTATGGT+GGG	+	chr3.1:66388325-66388344	MS.gene70443:CDS	50.0%
	GGTATCCGTTCCCACCATAA+CGG	-	chr3.1:66388338-66388357	None:intergenic	50.0%
	GTATCCGTTCCCACCATAAC+GGG	-	chr3.1:66388337-66388356	None:intergenic	50.0%
	TCCGAATCCGAGTCAGATTC+TGG	-	chr3.1:66388260-66388279	None:intergenic	50.0%
	TCTGTTGTAGCAGCTTTCCG+GGG	-	chr3.1:66388204-66388223	None:intergenic	50.0%
	TGGAATTGGACCCGTTATGG+TGG	+	chr3.1:66388324-66388343	MS.gene70443:CDS	50.0%
	TGGGTTATGGGAAAGGGTCT+GGG	-	chr3.1:66388662-66388681	None:intergenic	50.0%
	TTGGGTTATGGGAAAGGGTC+TGG	-	chr3.1:66388663-66388682	None:intergenic	50.0%
!	ACGCCTCTCCAAACTTGCTT+TGG	+	chr3.1:66388703-66388722	MS.gene70443:CDS	50.0%
!	AGTTGTTGTAGCAGGGGTGT+TGG	-	chr3.1:66388960-66388979	None:intergenic	50.0%
!	GTATTTGCTGCGCGTGGAAT+CGG	-	chr3.1:66388623-66388642	None:intergenic	50.0%
!	TATTTGCTGCGCGTGGAATC+GGG	-	chr3.1:66388622-66388641	None:intergenic	50.0%
!!	CAACTTTTCAGGCCCATGTC+TGG	+	chr3.1:66388975-66388994	MS.gene70443:CDS	50.0%
!!	TGGAGAGGCGTTTGAGAAGA+GGG	-	chr3.1:66388694-66388713	None:intergenic	50.0%
!!	TTGGAGAGGCGTTTGAGAAG+AGG	-	chr3.1:66388695-66388714	None:intergenic	50.0%
	ACAGAGGGAAGTGGCCGAAA+CGG	+	chr3.1:66388219-66388238	MS.gene70443:CDS	55.0%
	CCACGCGCAGCAAATACATG+TGG	+	chr3.1:66388626-66388645	MS.gene70443:CDS	55.0%
	CCGGAAAGCTGCTACAACAG+AGG	+	chr3.1:66388203-66388222	MS.gene70443:CDS	55.0%
	CTGTTGTAGCAGCTTTCCGG+GGG	-	chr3.1:66388203-66388222	None:intergenic	55.0%
	GCTGCTACAACAGAGGGAAG+TGG	+	chr3.1:66388210-66388229	MS.gene70443:CDS	55.0%
	GGCTCCAAACACGAGAGTCT+CGG	-	chr3.1:66388168-66388187	None:intergenic	55.0%
	TCGACCGAGACTCTCGTGTT+TGG	+	chr3.1:66388161-66388180	MS.gene70443:CDS	55.0%
	TCTCGTTCCGCTTCCCGTTT+CGG	-	chr3.1:66388236-66388255	None:intergenic	55.0%
!	CCACATGTATTTGCTGCGCG+TGG	-	chr3.1:66388629-66388648	None:intergenic	55.0%
!	GGAATCGGGATGGCATCGAA+GGG	-	chr3.1:66388608-66388627	None:intergenic	55.0%
!	TGGAATCGGGATGGCATCGA+AGG	-	chr3.1:66388609-66388628	None:intergenic	55.0%
!	TGGACCCGTTATGGTGGGAA+CGG	+	chr3.1:66388330-66388349	MS.gene70443:CDS	55.0%
!!	AACGGGTTGCCTTGACAAGC+TGG	-	chr3.1:66388865-66388884	None:intergenic	55.0%
!!	GTTGTAGCAGGGGTGTTGGA+AGG	-	chr3.1:66388956-66388975	None:intergenic	55.0%
	CAGAGGGAAGTGGCCGAAAC+GGG	+	chr3.1:66388220-66388239	MS.gene70443:CDS	60.0%
	GAAGTGGCCGAAACGGGAAG+CGG	+	chr3.1:66388226-66388245	MS.gene70443:CDS	60.0%
	TTGTAGCAGCTTTCCGGGGG+AGG	-	chr3.1:66388200-66388219	None:intergenic	60.0%
	AGCAGCTTTCCGGGGGAGGT+TGG	-	chr3.1:66388196-66388215	None:intergenic	65.0%
	GCTTTCCGGGGGAGGTTGGA+TGG	-	chr3.1:66388192-66388211	None:intergenic	65.0%
	TGCTGCGCGTGGAATCGGGA+TGG	-	chr3.1:66388618-66388637	None:intergenic	65.0%
	TTCCGGGGGAGGTTGGATGG+CGG	-	chr3.1:66388189-66388208	None:intergenic	65.0%
	AGCCGCCATCCAACCTCCCC+CGG	+	chr3.1:66388184-66388203	MS.gene70443:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	66388158	66389054	66388158	ID=MS.gene70443
chr3.1	mRNA	66388158	66389054	66388158	ID=MS.gene70443.t1;Parent=MS.gene70443
chr3.1	exon	66388158	66388748	66388158	ID=MS.gene70443.t1.exon1;Parent=MS.gene70443.t1
chr3.1	CDS	66388158	66388748	66388158	ID=cds.MS.gene70443.t1;Parent=MS.gene70443.t1
chr3.1	exon	66388845	66389054	66388845	ID=MS.gene70443.t1.exon2;Parent=MS.gene70443.t1
chr3.1	CDS	66388845	66389054	66388845	ID=cds.MS.gene70443.t1;Parent=MS.gene70443.t1

Gene Sequence

>MS.gene70443

ATGTCGACCGAGACTCTCGTGTTTGGAGCCGCCATCCAACCTCCCCCGGAAAGCTGCTACAACAGAGGGAAGTGGCCGAAACGGGAAGCGGAACGAGAACCAGAATCTGACTCGGATTCGGAATCGGAATCGGAATCAGAATCGGAAGTAGAATCGAAAGTGAAAGTGGAATTGGACCCGTTATGGTGGGAACGGATACCATTAGAAGATCTGAAGGAGAGTGATTTCGCTAGCCGTTATGAAGATGATCCTTTTCCTTACTTTTTTACGTGTCCGAAATTTGTTTATGAGAATAAAGCTATGAGAGATAAAGAAGAGGCTAGAAAAAATGCTGTCGAAAAGTATTGGAAGGAAGCTGAGAACATGTTGTTTCCCTCTCTTAATTTTTGTTTTAATTTTGTATTTAACTCTTTTAATCTGTTTCTGTTTCTGTACTCTGCTGCACAGCCCTTCGATGCCATCCCGATTCCACGCGCAGCAAATACATGTGGCAATAACTATCCCAGACCCTTTCCCATAACCCAACAACGTATCCCTCTTCTCAAACGCCTCTCCAAACTTGCTTTGGAAAAATACAATGTTGACAATCAGGTTTTAAACTAACTACTTCAGTTCACCACCATTGTTTATATCTTATTTATTCTTTTGTTCATCACCTTCATTGTTCTTTCTGTTTCTCTTATTTAGGCCAAATATGAGTTTGTCCAGCTTGTCAAGGCAACCCGTTCTCCTATTCCTCTTGGTACTTATTACATTACTTTTAAGGCAAAACAACCAATACCTCAAGTTGTTGAACCTTCCAACACCCCTGCTACAACAACTTTTCAGGCCCATGTCTGGAACAAGATATCTGGAACAACTAAGGTCAAGTCGTGTTCCATTAAAACCTCTAATTAA

Protein sequence

>MS.gene70443.t1

MSTETLVFGAAIQPPPESCYNRGKWPKREAEREPESDSDSESESESESEVESKVKVELDPLWWERIPLEDLKESDFASRYEDDPFPYFFTCPKFVYENKAMRDKEEARKNAVEKYWKEAENMLFPSLNFCFNFVFNSFNLFLFLYSAAQPFDAIPIPRAANTCGNNYPRPFPITQQRIPLLKRLSKLALEKYNVDNQAKYEFVQLVKATRSPIPLGTYYITFKAKQPIPQVVEPSNTPATTTFQAHVWNKISGTTKVKSCSIKTSN