Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06989.t1 | XP_024625354.1 | 100 | 82 | 0 | 0 | 1 | 82 | 1 | 82 | 1.40E-41 | 178.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06989.t1 | O82238 | 84.1 | 82 | 13 | 0 | 1 | 82 | 36 | 117 | 2.0e-36 | 152.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06989.t1 | G7KRW9 | 100.0 | 82 | 0 | 0 | 1 | 82 | 1 | 82 | 1.0e-41 | 178.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene06989 | 0.879835 | 9.00E-70 | -1.69E-46 |
| MS.gene049340 | MS.gene06989 | 0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene06989 | 0.848901 | 4.56E-60 | -1.69E-46 |
| MS.gene049382 | MS.gene06989 | 0.802899 | 4.51E-49 | -1.69E-46 |
| MS.gene049653 | MS.gene06989 | 0.819479 | 1.14E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene06989 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene049887 | MS.gene06989 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene06989 | 0.925397 | 1.94E-90 | -1.69E-46 |
| MS.gene050303 | MS.gene06989 | 0.82465 | 7.19E-54 | -1.69E-46 |
| MS.gene050317 | MS.gene06989 | 0.817889 | 2.61E-52 | -1.69E-46 |
| MS.gene050320 | MS.gene06989 | 0.844845 | 5.87E-59 | -1.69E-46 |
| MS.gene050437 | MS.gene06989 | 0.835465 | 1.65E-56 | -1.69E-46 |
| MS.gene050689 | MS.gene06989 | 0.835519 | 1.60E-56 | -1.69E-46 |
| MS.gene050752 | MS.gene06989 | 0.838001 | 3.73E-57 | -1.69E-46 |
| MS.gene050815 | MS.gene06989 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene050838 | MS.gene06989 | 0.859806 | 3.21E-63 | -1.69E-46 |
| MS.gene050955 | MS.gene06989 | 0.808974 | 2.38E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene06989 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene06989 | 0.85477 | 9.87E-62 | -1.69E-46 |
| MS.gene051088 | MS.gene06989 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene051241 | MS.gene06989 | 0.828128 | 1.07E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene06989 | 0.855762 | 5.08E-62 | -1.69E-46 |
| MS.gene051245 | MS.gene06989 | 0.885992 | 5.04E-72 | -1.69E-46 |
| MS.gene051328 | MS.gene06989 | 0.863976 | 1.69E-64 | -1.69E-46 |
| MS.gene051330 | MS.gene06989 | 0.846109 | 2.67E-59 | -1.69E-46 |
| MS.gene051349 | MS.gene06989 | 0.816997 | 4.14E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene06989 | 0.857689 | 1.38E-62 | -1.69E-46 |
| MS.gene051451 | MS.gene06989 | 0.828795 | 7.37E-55 | -1.69E-46 |
| MS.gene051577 | MS.gene06989 | 0.801492 | 8.78E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene06989 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene051746 | MS.gene06989 | 0.86568 | 4.95E-65 | -1.69E-46 |
| MS.gene051748 | MS.gene06989 | 0.865195 | 7.04E-65 | -1.69E-46 |
| MS.gene051756 | MS.gene06989 | 0.853136 | 2.92E-61 | -1.69E-46 |
| MS.gene051757 | MS.gene06989 | 0.870281 | 1.64E-66 | -1.69E-46 |
| MS.gene051789 | MS.gene06989 | 0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene06989 | 0.841591 | 4.33E-58 | -1.69E-46 |
| MS.gene05188 | MS.gene06989 | 0.805392 | 1.37E-49 | -1.69E-46 |
| MS.gene051903 | MS.gene06989 | 0.892483 | 1.52E-74 | -1.69E-46 |
| MS.gene051975 | MS.gene06989 | 0.806834 | 6.78E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene06989 | 0.818721 | 1.69E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene06989 | 0.822357 | 2.47E-53 | -1.69E-46 |
| MS.gene052286 | MS.gene06989 | 0.86682 | 2.16E-65 | -1.69E-46 |
| MS.gene052302 | MS.gene06989 | 0.846223 | 2.49E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene06989 | 0.841416 | 4.81E-58 | -1.69E-46 |
| MS.gene052856 | MS.gene06989 | 0.805581 | 1.25E-49 | -1.69E-46 |
| MS.gene052879 | MS.gene06989 | 0.807625 | 4.61E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene06989 | 0.879948 | 8.21E-70 | -1.69E-46 |
| MS.gene053058 | MS.gene06989 | 0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene053109 | MS.gene06989 | 0.87521 | 3.69E-68 | -1.69E-46 |
| MS.gene053590 | MS.gene06989 | 0.835906 | 1.28E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene06989 | 0.839661 | 1.39E-57 | -1.69E-46 |
| MS.gene054250 | MS.gene06989 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene06989 | 0.832276 | 1.04E-55 | -1.69E-46 |
| MS.gene055133 | MS.gene06989 | 0.830072 | 3.61E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene06989 | 0.856299 | 3.53E-62 | -1.69E-46 |
| MS.gene055174 | MS.gene06989 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene055424 | MS.gene06989 | 0.840557 | 8.09E-58 | -1.69E-46 |
| MS.gene055441 | MS.gene06989 | 0.827826 | 1.26E-54 | -1.69E-46 |
| MS.gene055591 | MS.gene06989 | -0.822065 | 2.89E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene06989 | 0.807077 | 6.03E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene06989 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene056432 | MS.gene06989 | 0.847217 | 1.33E-59 | -1.69E-46 |
| MS.gene056580 | MS.gene06989 | 0.849173 | 3.83E-60 | -1.69E-46 |
| MS.gene056601 | MS.gene06989 | 0.859239 | 4.74E-63 | -1.69E-46 |
| MS.gene056631 | MS.gene06989 | 0.915784 | 3.90E-85 | -1.69E-46 |
| MS.gene056760 | MS.gene06989 | 0.865561 | 5.40E-65 | -1.69E-46 |
| MS.gene056787 | MS.gene06989 | 0.814899 | 1.22E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene06989 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene06989 | 0.876309 | 1.55E-68 | -1.69E-46 |
| MS.gene057079 | MS.gene06989 | 0.825384 | 4.83E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene06989 | 0.877028 | 8.72E-69 | -1.69E-46 |
| MS.gene057140 | MS.gene06989 | 0.894962 | 1.51E-75 | -1.69E-46 |
| MS.gene057234 | MS.gene06989 | 0.910105 | 2.72E-82 | -1.69E-46 |
| MS.gene057392 | MS.gene06989 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene06989 | 0.852828 | 3.57E-61 | -1.69E-46 |
| MS.gene05795 | MS.gene06989 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene06989 | 0.808949 | 2.41E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene06989 | 0.84315 | 1.67E-58 | -1.69E-46 |
| MS.gene058055 | MS.gene06989 | 0.892739 | 1.20E-74 | -1.69E-46 |
| MS.gene058084 | MS.gene06989 | 0.830076 | 3.60E-55 | -1.69E-46 |
| MS.gene05809 | MS.gene06989 | 0.830915 | 2.24E-55 | -1.69E-46 |
| MS.gene058182 | MS.gene06989 | 0.837212 | 5.94E-57 | -1.69E-46 |
| MS.gene058238 | MS.gene06989 | 0.889002 | 3.57E-73 | -1.69E-46 |
| MS.gene058646 | MS.gene06989 | 0.829026 | 6.48E-55 | -1.69E-46 |
| MS.gene058654 | MS.gene06989 | 0.836517 | 8.93E-57 | -1.69E-46 |
| MS.gene058906 | MS.gene06989 | 0.945485 | 2.80E-104 | -1.69E-46 |
| MS.gene059249 | MS.gene06989 | 0.800819 | 1.21E-48 | -1.69E-46 |
| MS.gene059317 | MS.gene06989 | 0.815415 | 9.35E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene06989 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene06989 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene059898 | MS.gene06989 | 0.882654 | 8.69E-71 | -1.69E-46 |
| MS.gene06001 | MS.gene06989 | 0.910952 | 1.05E-82 | -1.69E-46 |
| MS.gene06011 | MS.gene06989 | 0.819533 | 1.10E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene06989 | 0.840157 | 1.03E-57 | -1.69E-46 |
| MS.gene060463 | MS.gene06989 | 0.828916 | 6.89E-55 | -1.69E-46 |
| MS.gene060465 | MS.gene06989 | 0.83233 | 1.01E-55 | -1.69E-46 |
| MS.gene060586 | MS.gene06989 | 0.822649 | 2.12E-53 | -1.69E-46 |
| MS.gene060702 | MS.gene06989 | 0.808426 | 3.12E-50 | -1.69E-46 |
| MS.gene060917 | MS.gene06989 | 0.824373 | 8.36E-54 | -1.69E-46 |
| MS.gene061145 | MS.gene06989 | 0.863733 | 2.02E-64 | -1.69E-46 |
| MS.gene06118 | MS.gene06989 | 0.810893 | 9.19E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06989.t1 | MTR_7g108810 | 100.000 | 82 | 0 | 0 | 1 | 82 | 1 | 82 | 5.96e-58 | 182 |
| MS.gene06989.t1 | MTR_8g058533 | 69.231 | 52 | 12 | 1 | 35 | 82 | 4 | 55 | 9.92e-18 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06989.t1 | AT3G62790 | 84.146 | 82 | 13 | 0 | 1 | 82 | 1 | 82 | 1.11e-48 | 149 |
| MS.gene06989.t1 | AT2G47690 | 84.146 | 82 | 13 | 0 | 1 | 82 | 36 | 117 | 5.28e-48 | 148 |
| MS.gene06989.t1 | AT2G47690 | 73.913 | 69 | 13 | 1 | 1 | 69 | 36 | 99 | 4.42e-31 | 105 |
| MS.gene06989.t1 | AT2G47690 | 92.000 | 50 | 4 | 0 | 1 | 50 | 36 | 85 | 2.40e-30 | 102 |
Find 25 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGTCGTTGCTACGATTTC+TGG | 0.156291 | 7.3:+6287720 | MS.gene06989:CDS |
| CCCGTCATCTTGACCTTTCC+TGG | 0.181566 | 7.3:-6290722 | None:intergenic |
| ACGAAGGAGAACACAATCTT+TGG | 0.275115 | 7.3:-6287780 | None:intergenic |
| AGGGATTGAAGGTACCTCTT+TGG | 0.327899 | 7.3:-6287831 | None:intergenic |
| TGAAGAAATGGCGTCAGGTT+GGG | 0.377961 | 7.3:+6287682 | None:intergenic |
| CGAAGGAGAACACAATCTTT+GGG | 0.421263 | 7.3:-6287779 | None:intergenic |
| GTTGTTCCTCCTTGTAAATC+CGG | 0.426154 | 7.3:-6290681 | None:intergenic |
| TGCAGTTCCAACGAAGAAAC+CGG | 0.439313 | 7.3:+6290662 | MS.gene06989:intron |
| TGTAAATCCGGTTTCTTCGT+TGG | 0.454351 | 7.3:-6290669 | None:intergenic |
| GAAGAAATGGCGTCAGGTTG+GGG | 0.457573 | 7.3:+6287683 | None:intergenic |
| GCAAACTAAGAGCTGCTGCC+AGG | 0.505591 | 7.3:+6290704 | MS.gene06989:CDS |
| GCGTCAGGTTGGGGAATCAC+TGG | 0.513534 | 7.3:+6287692 | MS.gene06989:CDS |
| GAAGGTGAAGAAATGGCGTC+AGG | 0.521379 | 7.3:+6287677 | None:intergenic |
| GTGAAGAAATGGCGTCAGGT+TGG | 0.524493 | 7.3:+6287681 | None:intergenic |
| ACGAAGAAACCGGATTTACA+AGG | 0.549458 | 7.3:+6290672 | MS.gene06989:CDS |
| CCAGGAAAGGTCAAGATGAC+GGG | 0.551383 | 7.3:+6290722 | MS.gene06989:CDS |
| GCCAGGAAAGGTCAAGATGA+CGG | 0.552182 | 7.3:+6290721 | MS.gene06989:CDS |
| CTAAGAGCTGCTGCCAGGAA+AGG | 0.556365 | 7.3:+6290709 | MS.gene06989:CDS |
| AAGGTACCTCTTTGGAATGG+TGG | 0.557593 | 7.3:-6287823 | None:intergenic |
| TTGAAGGTACCTCTTTGGAA+TGG | 0.575212 | 7.3:-6287826 | None:intergenic |
| GTACCTCTTTGGAATGGTGG+AGG | 0.591122 | 7.3:-6287820 | None:intergenic |
| TGGGGAATCACTGGTAACAA+AGG | 0.650188 | 7.3:+6287701 | MS.gene06989:CDS |
| ATGCCTCCACCATTCCAAAG+AGG | 0.652254 | 7.3:+6287817 | MS.gene06989:CDS |
| AAGAAACCGGATTTACAAGG+AGG | 0.717521 | 7.3:+6290675 | MS.gene06989:CDS |
| ATTCGAAGTAATCTTCACGA+AGG | 0.720124 | 7.3:-6287796 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTAAATTAAACATTTA+AGG | - | chr7.3:6289128-6289147 | None:intergenic | 10.0% |
| !! | GAATTGTAAAAAAAAAAAAA+AGG | - | chr7.3:6287877-6287896 | None:intergenic | 10.0% |
| !! | AAAAGTAAAAGAAAGAAAAA+GGG | - | chr7.3:6287853-6287872 | None:intergenic | 15.0% |
| !! | GTTAATTAAATATAGAGTAA+AGG | + | chr7.3:6288637-6288656 | MS.gene06989:intron | 15.0% |
| !! | TAAAAGTAAAAGAAAGAAAA+AGG | - | chr7.3:6287854-6287873 | None:intergenic | 15.0% |
| !!! | AGTTGTTTTATGTTTTTTTA+AGG | + | chr7.3:6290517-6290536 | MS.gene06989:intron | 15.0% |
| !!! | GTTGTTTTATGTTTTTTTAA+GGG | + | chr7.3:6290518-6290537 | MS.gene06989:intron | 15.0% |
| !!! | TACAATAATTTGTTAACATA+TGG | - | chr7.3:6290592-6290611 | None:intergenic | 15.0% |
| !!! | TTAGTTGATAACTTAATTAT+AGG | - | chr7.3:6289736-6289755 | None:intergenic | 15.0% |
| !!! | TTTTTTGTATATTGTTTAGA+TGG | + | chr7.3:6288260-6288279 | MS.gene06989:intron | 15.0% |
| !! | AAGGATGAAAAAAAATGATA+TGG | - | chr7.3:6288536-6288555 | None:intergenic | 20.0% |
| !! | ACTTAATTATAGGAAGAAAA+AGG | - | chr7.3:6289726-6289745 | None:intergenic | 20.0% |
| !! | AGGATGAAAAAAAATGATAT+GGG | - | chr7.3:6288535-6288554 | None:intergenic | 20.0% |
| !! | AGTAAAACAAAATAAGGTTT+GGG | - | chr7.3:6288183-6288202 | None:intergenic | 20.0% |
| !! | ATAATATGGTGGTTAATTTA+TGG | + | chr7.3:6289270-6289289 | MS.gene06989:intron | 20.0% |
| !! | ATCAACATTAGTCATTTATA+TGG | - | chr7.3:6290631-6290650 | None:intergenic | 20.0% |
| !! | ATGGATAAAATATTATAGGA+AGG | - | chr7.3:6290015-6290034 | None:intergenic | 20.0% |
| !! | CTTCATGGATAAAATATTAT+AGG | - | chr7.3:6290019-6290038 | None:intergenic | 20.0% |
| !! | TAAATTAACCACCATATTAT+TGG | - | chr7.3:6289270-6289289 | None:intergenic | 20.0% |
| !! | TGGATAAAATATTATAGGAA+GGG | - | chr7.3:6290014-6290033 | None:intergenic | 20.0% |
| !! | TTAATTAACAGAAAATACGA+GGG | - | chr7.3:6288626-6288645 | None:intergenic | 20.0% |
| !! | TTTAATTAACAGAAAATACG+AGG | - | chr7.3:6288627-6288646 | None:intergenic | 20.0% |
| !!! | CATAAAACAACTTTTTCTAT+CGG | - | chr7.3:6290509-6290528 | None:intergenic | 20.0% |
| ! | AATAGACTGAAATTGAATGT+AGG | - | chr7.3:6288740-6288759 | None:intergenic | 25.0% |
| ! | AGTTGACAAAAATTGAGTTA+TGG | + | chr7.3:6289577-6289596 | MS.gene06989:intron | 25.0% |
| ! | ATTTAAATCAACCAGTCTTT+AGG | - | chr7.3:6290287-6290306 | None:intergenic | 25.0% |
| ! | CAGTAAAACAAAATAAGGTT+TGG | - | chr7.3:6288184-6288203 | None:intergenic | 25.0% |
| ! | CATTAATCTTCACGAAATTA+GGG | - | chr7.3:6287940-6287959 | None:intergenic | 25.0% |
| ! | GAAAAATTGATACATGATGA+TGG | + | chr7.3:6288886-6288905 | MS.gene06989:intron | 25.0% |
| ! | GTTAAACTATAATTGCTACA+GGG | - | chr7.3:6288718-6288737 | None:intergenic | 25.0% |
| ! | TAATTAACAGAAAATACGAG+GGG | - | chr7.3:6288625-6288644 | None:intergenic | 25.0% |
| ! | TATGATTCTCCAATAACTTA+CGG | + | chr7.3:6289207-6289226 | MS.gene06989:intron | 25.0% |
| ! | TCATTAATCTTCACGAAATT+AGG | - | chr7.3:6287941-6287960 | None:intergenic | 25.0% |
| ! | TCTCTAACTAAGATAAATTG+AGG | - | chr7.3:6287990-6288009 | None:intergenic | 25.0% |
| ! | TTATCAACTAATATTGCTCT+GGG | + | chr7.3:6289745-6289764 | MS.gene06989:intron | 25.0% |
| ! | TTTATCCATGAAGTTTACTT+TGG | + | chr7.3:6290026-6290045 | MS.gene06989:intron | 25.0% |
| !! | ACTAGATTTTTCTCATATCA+AGG | - | chr7.3:6288398-6288417 | None:intergenic | 25.0% |
| !! | AGAAAGGTATAATTGAAAAG+AGG | + | chr7.3:6288447-6288466 | MS.gene06989:intron | 25.0% |
| !! | GAAAGGTATAATTGAAAAGA+GGG | + | chr7.3:6288448-6288467 | MS.gene06989:intron | 25.0% |
| !! | GTAACTTCTTTTTATGTTTG+TGG | + | chr7.3:6290149-6290168 | MS.gene06989:intron | 25.0% |
| !! | TGAGGTTATAATTTTTCATG+TGG | + | chr7.3:6289328-6289347 | MS.gene06989:intron | 25.0% |
| !! | TTTTTCTTGTTACGTTTATC+TGG | + | chr7.3:6289629-6289648 | MS.gene06989:intron | 25.0% |
| !!! | AACCTTATTTTGTTTTACTG+TGG | + | chr7.3:6288184-6288203 | MS.gene06989:intron | 25.0% |
| !!! | ATTTGTTTTCTCTCAATTTG+AGG | + | chr7.3:6288488-6288507 | MS.gene06989:intron | 25.0% |
| !!! | TAAAGGTCTTTTAGCTTATT+TGG | + | chr7.3:6289382-6289401 | MS.gene06989:intron | 25.0% |
| !!! | TTTGTTTTCTCTCAATTTGA+GGG | + | chr7.3:6288489-6288508 | MS.gene06989:intron | 25.0% |
| !!! | TTTTGAAAAACGAAATCAAG+TGG | - | chr7.3:6287917-6287936 | None:intergenic | 25.0% |
| AAAAAATGATATGGGACTCA+CGG | - | chr7.3:6288527-6288546 | None:intergenic | 30.0% | |
| AAACAAATAGCTTGAGAAGA+AGG | - | chr7.3:6288476-6288495 | None:intergenic | 30.0% | |
| AAATCTGATTGTGCTAATCA+TGG | - | chr7.3:6290337-6290356 | None:intergenic | 30.0% | |
| AAGAAAGAAAAAGGGATTGA+AGG | - | chr7.3:6287845-6287864 | None:intergenic | 30.0% | |
| AATCTACATCAACCTTGATT+TGG | + | chr7.3:6289042-6289061 | MS.gene06989:intron | 30.0% | |
| AATCTGATTGTGCTAATCAT+GGG | - | chr7.3:6290336-6290355 | None:intergenic | 30.0% | |
| AGTGAACTTGGAATTACAAT+GGG | + | chr7.3:6289101-6289120 | MS.gene06989:intron | 30.0% | |
| ATATTATAGGAAGGGTTTCT+AGG | - | chr7.3:6290006-6290025 | None:intergenic | 30.0% | |
| ATCTTACAATCAGGTACTTT+GGG | + | chr7.3:6289684-6289703 | MS.gene06989:intron | 30.0% | |
| CAACCAATGAAAACAATACA+GGG | + | chr7.3:6288763-6288782 | MS.gene06989:intron | 30.0% | |
| CAGATGAGAAATAGTTAGAA+AGG | + | chr7.3:6288431-6288450 | MS.gene06989:intron | 30.0% | |
| CTCGAACTTTAATCATTGTT+CGG | - | chr7.3:6288143-6288162 | None:intergenic | 30.0% | |
| GCATGACAAAATAAGCTAAA+AGG | - | chr7.3:6289391-6289410 | None:intergenic | 30.0% | |
| GCTATTATGTTTGTAATGTG+TGG | - | chr7.3:6289552-6289571 | None:intergenic | 30.0% | |
| GGTTAAACTATAATTGCTAC+AGG | - | chr7.3:6288719-6288738 | None:intergenic | 30.0% | |
| GTTATCAACTAATATTGCTC+TGG | + | chr7.3:6289744-6289763 | MS.gene06989:intron | 30.0% | |
| TAATGTGTGGTTGATTGAAA+AGG | - | chr7.3:6289539-6289558 | None:intergenic | 30.0% | |
| TCAACCAATGAAAACAATAC+AGG | + | chr7.3:6288762-6288781 | MS.gene06989:intron | 30.0% | |
| TCGAACTTTAATCATTGTTC+GGG | - | chr7.3:6288142-6288161 | None:intergenic | 30.0% | |
| TGCCACAGTAAAACAAAATA+AGG | - | chr7.3:6288189-6288208 | None:intergenic | 30.0% | |
| TGTTACGTTTATCTGGTTAA+AGG | + | chr7.3:6289636-6289655 | MS.gene06989:intron | 30.0% | |
| TTGGTGAGAAAAGTTTATTC+TGG | + | chr7.3:6290045-6290064 | MS.gene06989:intron | 30.0% | |
| TTGTTAACATATGGAACACT+GGG | - | chr7.3:6290583-6290602 | None:intergenic | 30.0% | |
| TTTACATCGAACAAAACAAC+AGG | - | chr7.3:6288323-6288342 | None:intergenic | 30.0% | |
| TTTGTTAACATATGGAACAC+TGG | - | chr7.3:6290584-6290603 | None:intergenic | 30.0% | |
| ! | AATAGAGTAGACTAGCTATT+TGG | - | chr7.3:6289478-6289497 | None:intergenic | 30.0% |
| ! | AATCCCTGTATTGTTTTCAT+TGG | - | chr7.3:6288769-6288788 | None:intergenic | 30.0% |
| ! | TGCTGTAATATAGTTTTCGA+AGG | - | chr7.3:6290218-6290237 | None:intergenic | 30.0% |
| ! | TTGTTTTCTCTCAATTTGAG+GGG | + | chr7.3:6288490-6288509 | MS.gene06989:intron | 30.0% |
| ! | TTTCGAAGGAATTTGAAACA+AGG | - | chr7.3:6290204-6290223 | None:intergenic | 30.0% |
| ! | TTTTTCTCGTTACGTTTATC+TGG | + | chr7.3:6289358-6289377 | MS.gene06989:intron | 30.0% |
| !! | AAATTGATACATGATGATGG+TGG | + | chr7.3:6288889-6288908 | MS.gene06989:intron | 30.0% |
| !! | TTAACATGTGTTACTTGGTT+AGG | - | chr7.3:6288967-6288986 | None:intergenic | 30.0% |
| !!! | GCATTTGGTTTTGTTTCATA+TGG | + | chr7.3:6289292-6289311 | MS.gene06989:intron | 30.0% |
| AAGCATTCTTTCCTACTACA+TGG | - | chr7.3:6289863-6289882 | None:intergenic | 35.0% | |
| ACAGAAAGTTGACCAAGATA+AGG | + | chr7.3:6290409-6290428 | MS.gene06989:intron | 35.0% | |
| ATTCGAAGTAATCTTCACGA+AGG | - | chr7.3:6287799-6287818 | None:intergenic | 35.0% | |
| CAACAGAATTACAGTGAACT+TGG | + | chr7.3:6289089-6289108 | MS.gene06989:intron | 35.0% | |
| CAGTGAACTTGGAATTACAA+TGG | + | chr7.3:6289100-6289119 | MS.gene06989:intron | 35.0% | |
| CGTTACGTTTATCTGGTTAA+AGG | + | chr7.3:6289365-6289384 | MS.gene06989:intron | 35.0% | |
| CTCATATTTCAGCAGATGTT+TGG | - | chr7.3:6289505-6289524 | None:intergenic | 35.0% | |
| CTTTGTTGCATAAAGAGCTT+TGG | + | chr7.3:6289976-6289995 | MS.gene06989:intron | 35.0% | |
| GAGGAAAGAAAGAAACTGTT+GGG | + | chr7.3:6290455-6290474 | MS.gene06989:intron | 35.0% | |
| GATCTTACAATCAGGTACTT+TGG | + | chr7.3:6289683-6289702 | MS.gene06989:intron | 35.0% | |
| GATTAGCACAATCAGATTTG+TGG | + | chr7.3:6290338-6290357 | MS.gene06989:intron | 35.0% | |
| GCCAAAAGCTAATTCACAAT+GGG | - | chr7.3:6290124-6290143 | None:intergenic | 35.0% | |
| GGAATATGACAACAGTCATA+TGG | + | chr7.3:6289598-6289617 | MS.gene06989:intron | 35.0% | |
| GGGGAAACTAAAACATATGT+GGG | + | chr7.3:6289925-6289944 | MS.gene06989:intron | 35.0% | |
| GGTGGTTAATTTATGGCATT+TGG | + | chr7.3:6289277-6289296 | MS.gene06989:intron | 35.0% | |
| GTAAAACAAGACCTAAAGAC+TGG | + | chr7.3:6290273-6290292 | MS.gene06989:intron | 35.0% | |
| GTTATTGGGATGCAATGTAT+CGG | + | chr7.3:6288103-6288122 | MS.gene06989:intron | 35.0% | |
| TCTCACCAAAGTAAACTTCA+TGG | - | chr7.3:6290034-6290053 | None:intergenic | 35.0% | |
| TGAGGAAAGAAAGAAACTGT+TGG | + | chr7.3:6290454-6290473 | MS.gene06989:intron | 35.0% | |
| TGCCAAAAGCTAATTCACAA+TGG | - | chr7.3:6290125-6290144 | None:intergenic | 35.0% | |
| TTATTCTGGTACTCAAGTTC+AGG | + | chr7.3:6290059-6290078 | MS.gene06989:intron | 35.0% | |
| TTATTGGGATGCAATGTATC+GGG | + | chr7.3:6288104-6288123 | MS.gene06989:intron | 35.0% | |
| TTTAAGGATGTAAAGTCCTG+TGG | + | chr7.3:6289241-6289260 | MS.gene06989:intron | 35.0% | |
| ! | AGGAAAGAATGCTTTTGGTA+GGG | + | chr7.3:6289869-6289888 | MS.gene06989:intron | 35.0% |
| ! | AGGTACTTTGGGTACATTTT+AGG | + | chr7.3:6289695-6289714 | MS.gene06989:intron | 35.0% |
| ! | CTATTTCTCATCTGTGATAC+AGG | - | chr7.3:6288425-6288444 | None:intergenic | 35.0% |
| ! | GATGTCGATTATGGGTTATT+GGG | + | chr7.3:6288089-6288108 | MS.gene06989:intron | 35.0% |
| ! | GTAGTAGGAAAGAATGCTTT+TGG | + | chr7.3:6289864-6289883 | MS.gene06989:intron | 35.0% |
| ! | GTCTGTTAACATGTGTTACT+TGG | - | chr7.3:6288972-6288991 | None:intergenic | 35.0% |
| ! | TAGGAAAGAATGCTTTTGGT+AGG | + | chr7.3:6289868-6289887 | MS.gene06989:intron | 35.0% |
| ! | TAGGCACTTGTTAGTAAACA+GGG | + | chr7.3:6288800-6288819 | MS.gene06989:intron | 35.0% |
| !! | GACATTCTCTACTGCTTTTA+AGG | - | chr7.3:6290085-6290104 | None:intergenic | 35.0% |
| !! | TAGTGCTTTTTATGCACCTT+GGG | + | chr7.3:6290239-6290258 | MS.gene06989:intron | 35.0% |
| !! | TGGGAAGTATTGAAAATGAC+TGG | + | chr7.3:6289944-6289963 | MS.gene06989:intron | 35.0% |
| !!! | ACCCATTGTGAATTAGCTTT+TGG | + | chr7.3:6290120-6290139 | MS.gene06989:intron | 35.0% |
| !!! | GTCATGCTGATTTTTCATGT+GGG | + | chr7.3:6289442-6289461 | MS.gene06989:intron | 35.0% |
| !!! | GTGAATTAGCTTTTGGCAAA+TGG | + | chr7.3:6290127-6290146 | MS.gene06989:intron | 35.0% |
| !!! | TCATGCTGATTTTTCATGTG+GGG | + | chr7.3:6289443-6289462 | MS.gene06989:intron | 35.0% |
| !!! | TGTCATGCTGATTTTTCATG+TGG | + | chr7.3:6289441-6289460 | MS.gene06989:intron | 35.0% |
| !!! | TTTTTTCTCCACAGCACAAT+GGG | + | chr7.3:6288557-6288576 | MS.gene06989:intron | 35.0% |
| AAGAAACCGGATTTACAAGG+AGG | + | chr7.3:6290675-6290694 | MS.gene06989:CDS | 40.0% | |
| ACAGACTTAACATCCTGTAG+TGG | + | chr7.3:6288986-6289005 | MS.gene06989:intron | 40.0% | |
| ACGAAGAAACCGGATTTACA+AGG | + | chr7.3:6290672-6290691 | MS.gene06989:CDS | 40.0% | |
| ACGAAGGAGAACACAATCTT+TGG | - | chr7.3:6287783-6287802 | None:intergenic | 40.0% | |
| CAATAGAAACTCTACTCGCA+AGG | - | chr7.3:6290377-6290396 | None:intergenic | 40.0% | |
| CACAATCAGATTTGTGGCAT+GGG | + | chr7.3:6290344-6290363 | MS.gene06989:intron | 40.0% | |
| CAGACTTAACATCCTGTAGT+GGG | + | chr7.3:6288987-6289006 | MS.gene06989:intron | 40.0% | |
| CGAAGGAGAACACAATCTTT+GGG | - | chr7.3:6287782-6287801 | None:intergenic | 40.0% | |
| GAAAGTTGACCAAGATAAGG+AGG | + | chr7.3:6290412-6290431 | MS.gene06989:intron | 40.0% | |
| GGGGGAAACTAAAACATATG+TGG | + | chr7.3:6289924-6289943 | MS.gene06989:intron | 40.0% | |
| GTCATGCTGATCTTACAATC+AGG | + | chr7.3:6289675-6289694 | MS.gene06989:intron | 40.0% | |
| GTGAAACTTACCTGCTTGTT+GGG | + | chr7.3:6289904-6289923 | MS.gene06989:intron | 40.0% | |
| GTGTCATGACCGTAAGTTAT+TGG | - | chr7.3:6289219-6289238 | None:intergenic | 40.0% | |
| GTTGTTCCTCCTTGTAAATC+CGG | - | chr7.3:6290684-6290703 | None:intergenic | 40.0% | |
| TACATGGCTATTGAGGTGAA+AGG | - | chr7.3:6289847-6289866 | None:intergenic | 40.0% | |
| TACGGTCATGACACAGTTTA+AGG | + | chr7.3:6289225-6289244 | MS.gene06989:intron | 40.0% | |
| TATGGCGCAGTTTGATTATG+AGG | + | chr7.3:6289310-6289329 | MS.gene06989:intron | 40.0% | |
| TGTAAATCCGGTTTCTTCGT+TGG | - | chr7.3:6290672-6290691 | None:intergenic | 40.0% | |
| TGTGCTGTGGAGAAAAAACA+AGG | - | chr7.3:6288555-6288574 | None:intergenic | 40.0% | |
| TTCCTACTACATGGCTATTG+AGG | - | chr7.3:6289854-6289873 | None:intergenic | 40.0% | |
| TTGTTAGTAAACAGGGGATG+AGG | + | chr7.3:6288807-6288826 | MS.gene06989:intron | 40.0% | |
| ! | AATTTTCTCCCATTGTGCTG+TGG | - | chr7.3:6288568-6288587 | None:intergenic | 40.0% |
| ! | AGGCACTTGTTAGTAAACAG+GGG | + | chr7.3:6288801-6288820 | MS.gene06989:intron | 40.0% |
| ! | CGATGTCGATTATGGGTTAT+TGG | + | chr7.3:6288088-6288107 | MS.gene06989:intron | 40.0% |
| ! | CTAGGCACTTGTTAGTAAAC+AGG | + | chr7.3:6288799-6288818 | MS.gene06989:intron | 40.0% |
| ! | GGAAAGAATGCTTTTGGTAG+GGG | + | chr7.3:6289870-6289889 | MS.gene06989:intron | 40.0% |
| ! | TCTGACTCGATGTCGATTAT+GGG | + | chr7.3:6288081-6288100 | MS.gene06989:intron | 40.0% |
| ! | TGAAACTTACCTGCTTGTTG+GGG | + | chr7.3:6289905-6289924 | MS.gene06989:intron | 40.0% |
| ! | TTTTCTCTCAATTTGAGGGG+AGG | + | chr7.3:6288493-6288512 | MS.gene06989:intron | 40.0% |
| !! | AGTGCTTTTTATGCACCTTG+GGG | + | chr7.3:6290240-6290259 | MS.gene06989:intron | 40.0% |
| !! | CTAGTGCTTTTTATGCACCT+TGG | + | chr7.3:6290238-6290257 | MS.gene06989:intron | 40.0% |
| !! | TTGAAGGTACCTCTTTGGAA+TGG | - | chr7.3:6287829-6287848 | None:intergenic | 40.0% |
| !!! | GTTTTTTCTCCACAGCACAA+TGG | + | chr7.3:6288556-6288575 | MS.gene06989:intron | 40.0% |
| AAGGTCGTTGCTACGATTTC+TGG | + | chr7.3:6287720-6287739 | MS.gene06989:CDS | 45.0% | |
| ACCATATTATTGGCAGCCAC+AGG | - | chr7.3:6289260-6289279 | None:intergenic | 45.0% | |
| AGAAATGAGAGTCCCACTAC+AGG | - | chr7.3:6289002-6289021 | None:intergenic | 45.0% | |
| CACCTCAATAGCCATGTAGT+AGG | + | chr7.3:6289849-6289868 | MS.gene06989:intron | 45.0% | |
| CATAATCGACATCGAGTCAG+AGG | - | chr7.3:6288082-6288101 | None:intergenic | 45.0% | |
| GCACAATCAGATTTGTGGCA+TGG | + | chr7.3:6290343-6290362 | MS.gene06989:intron | 45.0% | |
| GGTGAAACTTACCTGCTTGT+TGG | + | chr7.3:6289903-6289922 | MS.gene06989:intron | 45.0% | |
| TACTTGGTTAGGCAGTTGGT+TGG | - | chr7.3:6288956-6288975 | None:intergenic | 45.0% | |
| TCCTGTGGCTGCCAATAATA+TGG | + | chr7.3:6289256-6289275 | MS.gene06989:intron | 45.0% | |
| TGACCAAGATAAGGAGGCTT+GGG | + | chr7.3:6290418-6290437 | MS.gene06989:intron | 45.0% | |
| TGCAGTTCCAACGAAGAAAC+CGG | + | chr7.3:6290662-6290681 | MS.gene06989:intron | 45.0% | |
| TGGGGAATCACTGGTAACAA+AGG | + | chr7.3:6287701-6287720 | MS.gene06989:CDS | 45.0% | |
| TGTGGCTGCCAATAATATGG+TGG | + | chr7.3:6289259-6289278 | MS.gene06989:intron | 45.0% | |
| TTAGTAAACAGGGGATGAGG+TGG | + | chr7.3:6288810-6288829 | MS.gene06989:intron | 45.0% | |
| TTGACCAAGATAAGGAGGCT+TGG | + | chr7.3:6290417-6290436 | MS.gene06989:intron | 45.0% | |
| TTTATGCACCTTGGGGGAAA+AGG | + | chr7.3:6290247-6290266 | MS.gene06989:intron | 45.0% | |
| ! | CGAGAGAGAGCATGATTGAA+TGG | + | chr7.3:6289065-6289084 | MS.gene06989:intron | 45.0% |
| ! | CTCTGACTCGATGTCGATTA+TGG | + | chr7.3:6288080-6288099 | MS.gene06989:intron | 45.0% |
| ! | CTTTTGGTAGGGGCAAGTAA+GGG | + | chr7.3:6289880-6289899 | MS.gene06989:intron | 45.0% |
| ! | GAAACTTACCTGCTTGTTGG+GGG | + | chr7.3:6289906-6289925 | MS.gene06989:intron | 45.0% |
| ! | TTTACTTGCCTTTTCCCCCA+AGG | - | chr7.3:6290258-6290277 | None:intergenic | 45.0% |
| ! | TTTAGTTTCCCCCAACAAGC+AGG | - | chr7.3:6289917-6289936 | None:intergenic | 45.0% |
| ! | TTTTGGTAGGGGCAAGTAAG+GGG | + | chr7.3:6289881-6289900 | MS.gene06989:intron | 45.0% |
| !! | AAGGTACCTCTTTGGAATGG+TGG | - | chr7.3:6287826-6287845 | None:intergenic | 45.0% |
| !! | AGGGATTGAAGGTACCTCTT+TGG | - | chr7.3:6287834-6287853 | None:intergenic | 45.0% |
| !! | GTGCTTTTTATGCACCTTGG+GGG | + | chr7.3:6290241-6290260 | MS.gene06989:intron | 45.0% |
| !! | GTGTTACTTGGTTAGGCAGT+TGG | - | chr7.3:6288960-6288979 | None:intergenic | 45.0% |
| AACAAGCAAGCTCGAGAGCT+TGG | + | chr7.3:6288840-6288859 | MS.gene06989:intron | 50.0% | |
| ACATCGAGTCAGAGGCAACA+AGG | - | chr7.3:6288074-6288093 | None:intergenic | 50.0% | |
| ACCAAGATAAGGAGGCTTGG+GGG | + | chr7.3:6290420-6290439 | MS.gene06989:intron | 50.0% | |
| ATGCCTCCACCATTCCAAAG+AGG | + | chr7.3:6287817-6287836 | MS.gene06989:CDS | 50.0% | |
| CAATGTATCGGGCCAACGTT+CGG | + | chr7.3:6288115-6288134 | MS.gene06989:intron | 50.0% | |
| CCAGGAAAGGTCAAGATGAC+GGG | + | chr7.3:6290722-6290741 | MS.gene06989:CDS | 50.0% | |
| GACCAAGATAAGGAGGCTTG+GGG | + | chr7.3:6290419-6290438 | MS.gene06989:intron | 50.0% | |
| GCCAGGAAAGGTCAAGATGA+CGG | + | chr7.3:6290721-6290740 | MS.gene06989:CDS | 50.0% | |
| TGCTCTCTCTCGCCAAATCA+AGG | - | chr7.3:6289057-6289076 | None:intergenic | 50.0% | |
| TTTGGTAGGGGCAAGTAAGG+GGG | + | chr7.3:6289882-6289901 | MS.gene06989:intron | 50.0% | |
| ! | CAAACGCAGCTCTGACGATA+AGG | - | chr7.3:6288026-6288045 | None:intergenic | 50.0% |
| ! | CAGGGATTGTGCTGATGTCT+AGG | + | chr7.3:6288781-6288800 | MS.gene06989:intron | 50.0% |
| ! | GCTTTTGGTAGGGGCAAGTA+AGG | + | chr7.3:6289879-6289898 | MS.gene06989:intron | 50.0% |
| !! | GTACCTCTTTGGAATGGTGG+AGG | - | chr7.3:6287823-6287842 | None:intergenic | 50.0% |
| ATAAGGAGGCTTGGGGGAAG+AGG | + | chr7.3:6290426-6290445 | MS.gene06989:intron | 55.0% | |
| ATACGAGGGGAGATGCTGAG+AGG | - | chr7.3:6288612-6288631 | None:intergenic | 55.0% | |
| CATTGTTCGGGACCGAACGT+TGG | - | chr7.3:6288130-6288149 | None:intergenic | 55.0% | |
| CCCGTCATCTTGACCTTTCC+TGG | - | chr7.3:6290725-6290744 | None:intergenic | 55.0% | |
| CTAAGAGCTGCTGCCAGGAA+AGG | + | chr7.3:6290709-6290728 | MS.gene06989:CDS | 55.0% | |
| GCAAACTAAGAGCTGCTGCC+AGG | + | chr7.3:6290704-6290723 | MS.gene06989:CDS | 55.0% | |
| GTCAGAGCTGCGTTTGTCTG+TGG | + | chr7.3:6288030-6288049 | MS.gene06989:intron | 55.0% | |
| TAAGGAGGCTTGGGGGAAGA+GGG | + | chr7.3:6290427-6290446 | MS.gene06989:intron | 55.0% | |
| TCCCCCAAGCCTCCTTATCT+TGG | - | chr7.3:6290424-6290443 | None:intergenic | 55.0% | |
| TTGGGGGAAGAGGGCTATTG+AGG | + | chr7.3:6290436-6290455 | MS.gene06989:intron | 55.0% | |
| !! | GCGTCAGGTTGGGGAATCAC+TGG | + | chr7.3:6287692-6287711 | MS.gene06989:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6287689 | 6290765 | 6287689 | ID=MS.gene06989 |
| chr7.3 | mRNA | 6287689 | 6290765 | 6287689 | ID=MS.gene06989.t1;Parent=MS.gene06989 |
| chr7.3 | exon | 6287689 | 6287838 | 6287689 | ID=MS.gene06989.t1.exon1;Parent=MS.gene06989.t1 |
| chr7.3 | CDS | 6287689 | 6287838 | 6287689 | ID=cds.MS.gene06989.t1;Parent=MS.gene06989.t1 |
| chr7.3 | exon | 6290667 | 6290765 | 6290667 | ID=MS.gene06989.t1.exon2;Parent=MS.gene06989.t1 |
| chr7.3 | CDS | 6290667 | 6290765 | 6290667 | ID=cds.MS.gene06989.t1;Parent=MS.gene06989.t1 |
| Gene Sequence |
| Protein sequence |
