Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85220.t1 | XP_024632592.1 | 95.9 | 579 | 20 | 1 | 1 | 579 | 1 | 575 | 0.00E+00 | 1167.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85220.t1 | Q43089 | 86.3 | 556 | 66 | 4 | 1 | 553 | 1 | 549 | 1.2e-292 | 1006.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85220.t1 | A0A396JIU3 | 95.9 | 579 | 20 | 1 | 1 | 579 | 1 | 575 | 0.0e+00 | 1167.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene85220 | -0.834187 | 3.47E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene85220 | -0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene85220 | -0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene85220 | -0.81641 | 5.61E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene85220 | 0.824268 | 8.85E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene85220 | -0.826098 | 3.27E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene85220 | 0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene85220 | -0.823862 | 1.10E-53 | -1.69E-46 |
| MS.gene049573 | MS.gene85220 | 0.818405 | 1.99E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene85220 | 0.831091 | 2.03E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene85220 | -0.800884 | 1.17E-48 | -1.69E-46 |
| MS.gene049865 | MS.gene85220 | -0.810349 | 1.20E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene85220 | -0.816311 | 5.90E-52 | -1.69E-46 |
| MS.gene050129 | MS.gene85220 | 0.813588 | 2.37E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene85220 | -0.805233 | 1.47E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene85220 | -0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene85220 | -0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene85220 | 0.833196 | 6.13E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene85220 | 0.893364 | 6.73E-75 | -1.69E-46 |
| MS.gene050463 | MS.gene85220 | 0.823728 | 1.19E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene85220 | -0.827906 | 1.21E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene85220 | -0.84961 | 2.90E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene85220 | -0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene050528 | MS.gene85220 | 0.823411 | 1.41E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene85220 | -0.802053 | 6.73E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene85220 | -0.835158 | 1.98E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene85220 | -0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene85220 | -0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene85220 | -0.81268 | 3.75E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene85220 | -0.865981 | 3.98E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene85220 | -0.864458 | 1.20E-64 | -1.69E-46 |
| MS.gene050883 | MS.gene85220 | 0.860932 | 1.46E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene85220 | -0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene85220 | 0.829045 | 6.41E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene85220 | 0.806451 | 8.18E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene85220 | 0.848072 | 7.73E-60 | -1.69E-46 |
| MS.gene051138 | MS.gene85220 | 0.819077 | 1.40E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene85220 | -0.819455 | 1.15E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene85220 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene85220 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene85220 | 0.882235 | 1.23E-70 | -1.69E-46 |
| MS.gene05142 | MS.gene85220 | 0.834514 | 2.87E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene85220 | -0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene85220 | 0.944894 | 8.40E-104 | -1.69E-46 |
| MS.gene052164 | MS.gene85220 | -0.81406 | 1.87E-51 | -1.69E-46 |
| MS.gene05234 | MS.gene85220 | 0.822044 | 2.92E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene85220 | -0.832286 | 1.03E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene85220 | -0.840001 | 1.13E-57 | -1.69E-46 |
| MS.gene052566 | MS.gene85220 | 0.849354 | 3.41E-60 | -1.69E-46 |
| MS.gene052802 | MS.gene85220 | 0.817064 | 4.00E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene85220 | -0.830431 | 2.95E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene85220 | -0.842388 | 2.67E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene85220 | 0.848687 | 5.23E-60 | -1.69E-46 |
| MS.gene053488 | MS.gene85220 | 0.806109 | 9.65E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene85220 | 0.867731 | 1.10E-65 | -1.69E-46 |
| MS.gene053561 | MS.gene85220 | 0.858157 | 9.99E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene85220 | -0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene85220 | 0.829518 | 4.92E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene85220 | -0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene85220 | 0.824103 | 9.68E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene85220 | -0.80636 | 8.54E-50 | -1.69E-46 |
| MS.gene054616 | MS.gene85220 | 0.801874 | 7.33E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene85220 | -0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene85220 | 0.803509 | 3.37E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene85220 | 0.842682 | 2.23E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene85220 | -0.801845 | 7.43E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene85220 | -0.837477 | 5.08E-57 | -1.69E-46 |
| MS.gene054959 | MS.gene85220 | 0.816858 | 4.45E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene85220 | 0.829208 | 5.85E-55 | -1.69E-46 |
| MS.gene055139 | MS.gene85220 | 0.812109 | 5.00E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene85220 | 0.843184 | 1.64E-58 | -1.69E-46 |
| MS.gene055202 | MS.gene85220 | 0.843036 | 1.79E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene85220 | -0.833762 | 4.43E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene85220 | -0.848379 | 6.37E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene85220 | -0.846952 | 1.57E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene85220 | -0.82596 | 3.53E-54 | -1.69E-46 |
| MS.gene056310 | MS.gene85220 | 0.87953 | 1.16E-69 | -1.69E-46 |
| MS.gene056311 | MS.gene85220 | 0.896943 | 2.27E-76 | -1.69E-46 |
| MS.gene056313 | MS.gene85220 | 0.861828 | 7.80E-64 | -1.69E-46 |
| MS.gene056408 | MS.gene85220 | 0.830767 | 2.44E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene85220 | -0.847402 | 1.18E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene85220 | -0.850746 | 1.39E-60 | -1.69E-46 |
| MS.gene056550 | MS.gene85220 | 0.804619 | 1.98E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene85220 | -0.806517 | 7.92E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene85220 | 0.986083 | 1.29E-165 | -1.69E-46 |
| MS.gene058068 | MS.gene85220 | 0.817216 | 3.70E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene85220 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene058111 | MS.gene85220 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene058117 | MS.gene85220 | 0.817238 | 3.66E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene85220 | -0.824524 | 7.70E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene85220 | 0.869862 | 2.25E-66 | -1.69E-46 |
| MS.gene058173 | MS.gene85220 | 0.8652 | 7.02E-65 | -1.69E-46 |
| MS.gene058175 | MS.gene85220 | 0.875016 | 4.29E-68 | -1.69E-46 |
| MS.gene05837 | MS.gene85220 | -0.831982 | 1.23E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene85220 | -0.812849 | 3.45E-51 | -1.69E-46 |
| MS.gene058493 | MS.gene85220 | 0.854014 | 1.63E-61 | -1.69E-46 |
| MS.gene058494 | MS.gene85220 | 0.85734 | 1.74E-62 | -1.69E-46 |
| MS.gene058496 | MS.gene85220 | 0.818913 | 1.53E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene85220 | -0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene85220 | 0.818852 | 1.58E-52 | -1.69E-46 |
| MS.gene058630 | MS.gene85220 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene85220 | -0.83275 | 7.91E-56 | -1.69E-46 |
| MS.gene05884 | MS.gene85220 | 0.838736 | 2.41E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene85220 | -0.85875 | 6.65E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene85220 | -0.83487 | 2.33E-56 | -1.69E-46 |
| MS.gene059045 | MS.gene85220 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene85220 | 0.879106 | 1.63E-69 | -1.69E-46 |
| MS.gene059236 | MS.gene85220 | 0.861548 | 9.50E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene85220 | -0.813961 | 1.96E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene85220 | 0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene059694 | MS.gene85220 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene059701 | MS.gene85220 | 0.800238 | 1.58E-48 | -1.69E-46 |
| MS.gene059703 | MS.gene85220 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene85220 | -0.820979 | 5.15E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene85220 | -0.849137 | 3.92E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene85220 | -0.808876 | 2.50E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene85220 | 0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene06012 | MS.gene85220 | 0.808823 | 2.56E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene85220 | 0.826002 | 3.45E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene85220 | -0.807338 | 5.31E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene85220 | 0.860575 | 1.88E-63 | -1.69E-46 |
| MS.gene060703 | MS.gene85220 | -0.828243 | 1.00E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene85220 | -0.831444 | 1.66E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene85220 | -0.810545 | 1.09E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene85220 | -0.855108 | 7.87E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene85220 | -0.819543 | 1.10E-52 | -1.69E-46 |
| MS.gene061226 | MS.gene85220 | 0.808783 | 2.61E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85220.t1 | MTR_2g099950 | 95.337 | 579 | 20 | 2 | 1 | 579 | 1 | 572 | 0.0 | 1137 |
| MS.gene85220.t1 | MTR_2g099950 | 96.101 | 513 | 16 | 1 | 67 | 579 | 1 | 509 | 0.0 | 1021 |
| MS.gene85220.t1 | MTR_8g017410 | 76.339 | 579 | 128 | 4 | 3 | 579 | 4 | 575 | 0.0 | 922 |
| MS.gene85220.t1 | MTR_8g017410 | 77.500 | 520 | 109 | 3 | 62 | 579 | 16 | 529 | 0.0 | 845 |
| MS.gene85220.t1 | MTR_5g066380 | 60.855 | 585 | 200 | 12 | 8 | 579 | 6 | 574 | 0.0 | 716 |
| MS.gene85220.t1 | MTR_8g017410 | 73.786 | 412 | 99 | 4 | 3 | 412 | 4 | 408 | 0.0 | 633 |
| MS.gene85220.t1 | MTR_7g105050 | 54.965 | 564 | 231 | 7 | 23 | 578 | 25 | 573 | 0.0 | 619 |
| MS.gene85220.t1 | MTR_1g059700 | 54.448 | 562 | 237 | 9 | 23 | 579 | 21 | 568 | 0.0 | 611 |
| MS.gene85220.t1 | MTR_1g015910 | 54.461 | 538 | 234 | 4 | 44 | 578 | 42 | 571 | 0.0 | 605 |
| MS.gene85220.t1 | MTR_1g015970 | 53.102 | 548 | 246 | 5 | 34 | 578 | 6 | 545 | 0.0 | 598 |
| MS.gene85220.t1 | MTR_1g015910 | 53.846 | 520 | 229 | 4 | 62 | 578 | 17 | 528 | 0.0 | 572 |
| MS.gene85220.t1 | MTR_1g015980 | 48.833 | 557 | 264 | 10 | 33 | 578 | 5 | 551 | 0.0 | 537 |
| MS.gene85220.t1 | MTR_4g101630 | 47.575 | 536 | 263 | 9 | 48 | 578 | 112 | 634 | 2.79e-162 | 478 |
| MS.gene85220.t1 | MTR_3g008530 | 45.591 | 533 | 275 | 8 | 48 | 578 | 104 | 623 | 5.12e-155 | 459 |
| MS.gene85220.t1 | MTR_4g101630 | 46.756 | 524 | 261 | 9 | 60 | 578 | 12 | 522 | 2.67e-154 | 453 |
| MS.gene85220.t1 | MTR_1g015940 | 46.205 | 448 | 207 | 6 | 77 | 521 | 54 | 470 | 1.09e-135 | 404 |
| MS.gene85220.t1 | MTR_1g015920 | 32.692 | 104 | 65 | 2 | 259 | 358 | 4 | 106 | 2.93e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85220.t1 | AT3G13790 | 62.937 | 572 | 196 | 8 | 17 | 579 | 20 | 584 | 0.0 | 737 |
| MS.gene85220.t1 | AT3G13790 | 62.413 | 572 | 196 | 9 | 17 | 579 | 20 | 581 | 0.0 | 725 |
| MS.gene85220.t1 | AT1G55120 | 56.655 | 586 | 226 | 8 | 4 | 579 | 7 | 574 | 0.0 | 678 |
| MS.gene85220.t1 | AT3G13790 | 63.148 | 521 | 177 | 7 | 67 | 579 | 1 | 514 | 0.0 | 669 |
| MS.gene85220.t1 | AT3G13790 | 63.148 | 521 | 177 | 7 | 67 | 579 | 1 | 514 | 0.0 | 669 |
| MS.gene85220.t1 | AT3G13790 | 63.148 | 521 | 177 | 7 | 67 | 579 | 1 | 514 | 0.0 | 669 |
| MS.gene85220.t1 | AT1G55120 | 58.161 | 533 | 207 | 7 | 57 | 579 | 8 | 534 | 0.0 | 634 |
| MS.gene85220.t1 | AT3G13784 | 54.202 | 583 | 238 | 11 | 3 | 576 | 9 | 571 | 0.0 | 630 |
| MS.gene85220.t1 | AT1G55120 | 58.095 | 525 | 204 | 7 | 65 | 579 | 17 | 535 | 0.0 | 627 |
| MS.gene85220.t1 | AT1G55120 | 57.985 | 526 | 205 | 7 | 64 | 579 | 40 | 559 | 0.0 | 626 |
| MS.gene85220.t1 | AT3G13784 | 53.859 | 583 | 240 | 11 | 3 | 576 | 9 | 571 | 0.0 | 624 |
| MS.gene85220.t1 | AT3G13784 | 53.688 | 583 | 238 | 12 | 3 | 576 | 9 | 568 | 0.0 | 618 |
| MS.gene85220.t1 | AT3G13784 | 55.894 | 526 | 214 | 9 | 60 | 576 | 2 | 518 | 0.0 | 596 |
| MS.gene85220.t1 | AT3G52600 | 52.659 | 583 | 253 | 7 | 6 | 575 | 9 | 581 | 0.0 | 593 |
| MS.gene85220.t1 | AT2G36190 | 53.004 | 566 | 243 | 7 | 23 | 575 | 27 | 582 | 0.0 | 587 |
| MS.gene85220.t1 | AT3G52600 | 53.890 | 527 | 223 | 6 | 62 | 575 | 8 | 527 | 0.0 | 555 |
| MS.gene85220.t1 | AT3G52600 | 53.640 | 522 | 222 | 6 | 67 | 575 | 1 | 515 | 0.0 | 545 |
| MS.gene85220.t1 | AT5G11920 | 49.536 | 539 | 255 | 9 | 48 | 579 | 17 | 545 | 9.82e-178 | 514 |
| MS.gene85220.t1 | AT5G11920 | 48.846 | 520 | 249 | 9 | 67 | 579 | 1 | 510 | 1.65e-164 | 479 |
| MS.gene85220.t1 | AT1G62660 | 47.037 | 540 | 268 | 11 | 48 | 579 | 106 | 635 | 1.03e-157 | 466 |
| MS.gene85220.t1 | AT1G12240 | 44.954 | 545 | 273 | 11 | 48 | 579 | 121 | 651 | 3.30e-154 | 457 |
| MS.gene85220.t1 | AT1G62660 | 46.198 | 526 | 265 | 11 | 62 | 579 | 22 | 537 | 1.52e-148 | 439 |
| MS.gene85220.t1 | AT5G11920 | 51.451 | 379 | 168 | 8 | 48 | 420 | 17 | 385 | 1.30e-126 | 379 |
| MS.gene85220.t1 | AT1G62660 | 44.444 | 477 | 247 | 11 | 111 | 579 | 3 | 469 | 4.93e-123 | 371 |
| MS.gene85220.t1 | AT1G62660 | 44.444 | 477 | 247 | 11 | 111 | 579 | 3 | 469 | 4.93e-123 | 371 |
Find 138 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTCTTCTCTCTCATTTA+TGG | 0.118372 | 2.4:+4424905 | MS.gene85220:CDS |
| TCATTTGAAGTGAAAGATTT+TGG | 0.181984 | 2.4:+4428105 | MS.gene85220:CDS |
| AAGAGAGTTAGCAATAAAAT+TGG | 0.204427 | 2.4:-4424890 | None:intergenic |
| TTGTTATATGCTTTCAATAA+TGG | 0.210493 | 2.4:+4429037 | MS.gene85220:CDS |
| CAGATATCAACATAAGAATT+TGG | 0.218589 | 2.4:+4428278 | MS.gene85220:CDS |
| CTGTTTGGTAAGCAAGAAAT+AGG | 0.251352 | 2.4:-4426888 | None:intergenic |
| CAATCCAAAAGGTGCTGTTT+GGG | 0.272533 | 2.4:+4425793 | MS.gene85220:CDS |
| ACTGAATTAACACCAGTAAT+TGG | 0.279878 | 2.4:-4427829 | None:intergenic |
| ACCTTGGTGGGCCAATTGAC+TGG | 0.297166 | 2.4:-4427784 | None:intergenic |
| AAACATGATCACTATTTGAT+TGG | 0.304462 | 2.4:+4427196 | MS.gene85220:CDS |
| AATGGATTCTTATTTGATAC+TGG | 0.309454 | 2.4:-4427100 | None:intergenic |
| CATTCAGTGGTGGAGAGTTT+TGG | 0.312021 | 2.4:+4428950 | MS.gene85220:CDS |
| ACATGTGCTTAAGGTTAGTT+TGG | 0.312368 | 2.4:+4427165 | MS.gene85220:CDS |
| AGACTATTCCAAGGGCTATC+TGG | 0.325731 | 2.4:+4427695 | MS.gene85220:intron |
| AGCTGAATGTAAAGGATGTT+TGG | 0.327426 | 2.4:-4427041 | None:intergenic |
| TTTCCCCAAACAGCACCTTT+TGG | 0.327751 | 2.4:-4425797 | None:intergenic |
| GGTGAATTGATTCCAATTAC+TGG | 0.339584 | 2.4:+4427817 | MS.gene85220:CDS |
| CAAAAGGGTGCATCAGTAAA+AGG | 0.341096 | 2.4:+4428177 | MS.gene85220:CDS |
| TGCTTACCAAACAGACTGTT+AGG | 0.341980 | 2.4:+4426897 | MS.gene85220:CDS |
| ACAATCCAAAAGGTGCTGTT+TGG | 0.345736 | 2.4:+4425792 | MS.gene85220:CDS |
| GATGTCTTTGTTCCGGATAA+TGG | 0.347597 | 2.4:+4427238 | MS.gene85220:CDS |
| TCTCAACCGTCAGATATAAA+AGG | 0.347684 | 2.4:+4425890 | MS.gene85220:CDS |
| TTAGGGACCCAACTACTTCT+TGG | 0.348017 | 2.4:+4426915 | MS.gene85220:CDS |
| GGGTATTGGAGAGTATTAAT+TGG | 0.349792 | 2.4:+4426950 | MS.gene85220:CDS |
| GTATCAAGACCAATGGTTAA+TGG | 0.350255 | 2.4:-4427118 | None:intergenic |
| TGTTAAGGATGTCTTTGTTC+CGG | 0.351247 | 2.4:+4427231 | MS.gene85220:CDS |
| GCTATCTGGCTTCATAAATC+AGG | 0.355554 | 2.4:+4427709 | MS.gene85220:CDS |
| TATCCATTTGTCCAATAATT+CGG | 0.361523 | 2.4:-4428133 | None:intergenic |
| ATTCCTGTGTACAAAATTGC+TGG | 0.362081 | 2.4:-4425953 | None:intergenic |
| TTTGATACTGGAAAGAAATC+AGG | 0.362726 | 2.4:-4427088 | None:intergenic |
| GAGAATGATATGACCACATA+TGG | 0.363306 | 2.4:+4428435 | MS.gene85220:CDS |
| AAGTGATAGGCAGTTCTATA+AGG | 0.365296 | 2.4:-4425013 | None:intergenic |
| ACTTCCAACCTCTCAAGAAT+TGG | 0.373141 | 2.4:+4425032 | MS.gene85220:CDS |
| AAAGGTGGTGTTGGACCATT+TGG | 0.375969 | 2.4:+4428195 | MS.gene85220:CDS |
| GGCTCAGCCACAATACTTCC+AGG | 0.379324 | 2.4:+4425923 | MS.gene85220:CDS |
| TATCAAAGGATCTTGTGAAT+TGG | 0.395856 | 2.4:+4425840 | MS.gene85220:CDS |
| CTGCACGTGTTTGCTTCTAA+AGG | 0.411259 | 2.4:+4428219 | MS.gene85220:CDS |
| CAAGATCCTTTGATACTGAA+TGG | 0.413406 | 2.4:-4425832 | None:intergenic |
| GATATAAAAGGTTGTTGGTC+AGG | 0.418374 | 2.4:+4425902 | MS.gene85220:CDS |
| AACATGGTGGGTAGCTTCAA+TGG | 0.424077 | 2.4:-4424942 | None:intergenic |
| TTTCCTAGCCAAGAAGTAGT+TGG | 0.425634 | 2.4:-4426923 | None:intergenic |
| TTACATTCAGCTGAAGGAAC+AGG | 0.425951 | 2.4:+4427052 | MS.gene85220:CDS |
| TAGAAGAATCTTGTTGGGTT+GGG | 0.427933 | 2.4:+4427342 | MS.gene85220:CDS |
| GAAGAATAGAAGAATCTTGT+TGG | 0.428646 | 2.4:+4427336 | MS.gene85220:CDS |
| AGGCCGAATTATTGGACAAA+TGG | 0.428825 | 2.4:+4428130 | MS.gene85220:CDS |
| AACATGATCACTATTTGATT+GGG | 0.429903 | 2.4:+4427197 | MS.gene85220:CDS |
| TTCCTAGCCAAGAAGTAGTT+GGG | 0.430481 | 2.4:-4426922 | None:intergenic |
| ACCTCCCTTGATCACCTTGG+TGG | 0.438479 | 2.4:-4427797 | None:intergenic |
| CTTGAGAGGTTGGAAGTGAT+AGG | 0.439207 | 2.4:-4425026 | None:intergenic |
| TTTGTAGGACCAATGAGATA+TGG | 0.447970 | 2.4:+4425743 | MS.gene85220:intron |
| TGGGTCCCTAACAGTCTGTT+TGG | 0.449101 | 2.4:-4426903 | None:intergenic |
| AGATCACAAGATTGAATGCT+TGG | 0.449911 | 2.4:+4429074 | MS.gene85220:CDS |
| TACATTAGCAATCCATGATA+AGG | 0.451158 | 2.4:+4429012 | MS.gene85220:CDS |
| GGCTAGGAAAAGATGGGTAT+TGG | 0.451915 | 2.4:+4426936 | MS.gene85220:CDS |
| TACGTATGAACCCAGTCAAT+TGG | 0.452564 | 2.4:+4427773 | MS.gene85220:CDS |
| ACTTCTTGGCTAGGAAAAGA+TGG | 0.457660 | 2.4:+4426929 | MS.gene85220:CDS |
| AAAATTGCTGGTTTGCCACC+TGG | 0.460562 | 2.4:-4425941 | None:intergenic |
| GCAACAGTAGGTTCCATCAA+TGG | 0.461790 | 2.4:-4426067 | None:intergenic |
| CCTTGGTGGGCCAATTGACT+GGG | 0.462535 | 2.4:-4427783 | None:intergenic |
| AATGTGTTGAGATATGATTA+TGG | 0.466520 | 2.4:+4427277 | MS.gene85220:CDS |
| TTATCCTCAAATCCATTATC+CGG | 0.468101 | 2.4:-4427250 | None:intergenic |
| GATGTCAAGAAAGGATGGTC+TGG | 0.472931 | 2.4:+4427391 | MS.gene85220:CDS |
| TGATGTTAGACATGTGCTTA+AGG | 0.473030 | 2.4:+4427156 | MS.gene85220:CDS |
| TGGAAGCAAAGTACATAGAA+AGG | 0.475190 | 2.4:+4426970 | MS.gene85220:CDS |
| ATGTGTTGAGATATGATTAT+GGG | 0.477790 | 2.4:+4427278 | MS.gene85220:CDS |
| AAGAATAGAAGAATCTTGTT+GGG | 0.478669 | 2.4:+4427337 | MS.gene85220:CDS |
| ATAGAAGAATCTTGTTGGGT+TGG | 0.480625 | 2.4:+4427341 | MS.gene85220:CDS |
| TTGGCCCACCAAGGTGATCA+AGG | 0.481677 | 2.4:+4427792 | MS.gene85220:CDS |
| TTTATATCTGACGGTTGAGA+TGG | 0.484965 | 2.4:-4425887 | None:intergenic |
| TGTTCCGGATAATGGATTTG+AGG | 0.485113 | 2.4:+4427246 | MS.gene85220:CDS |
| CATATAACAAAGCCTTATCA+TGG | 0.485853 | 2.4:-4429024 | None:intergenic |
| CTGACCCATTACTTAGAGAA+TGG | 0.488472 | 2.4:+4426026 | MS.gene85220:CDS |
| CCTCCCTTGATCACCTTGGT+GGG | 0.490119 | 2.4:-4427796 | None:intergenic |
| TCTTGTGAATTGGACACCAT+TGG | 0.493731 | 2.4:+4425850 | MS.gene85220:CDS |
| AAGATGAACTCTCAAGAGTT+CGG | 0.497881 | 2.4:-4424967 | None:intergenic |
| TGGGACTTATGATACTGTTA+AGG | 0.500179 | 2.4:+4427216 | MS.gene85220:CDS |
| TGATCCAATTCTTGAGAGGT+TGG | 0.501083 | 2.4:-4425036 | None:intergenic |
| ATAAGGTTGATCATGATTTG+AGG | 0.502178 | 2.4:-4424996 | None:intergenic |
| TTCTACCAATACAATCCAAA+AGG | 0.504711 | 2.4:+4425782 | MS.gene85220:CDS |
| TTATGAAGCCAGATAGCCCT+TGG | 0.506124 | 2.4:-4427703 | None:intergenic |
| TTATATCTGACGGTTGAGAT+GGG | 0.511411 | 2.4:-4425886 | None:intergenic |
| CGTCAGATATAAAAGGTTGT+TGG | 0.511481 | 2.4:+4425897 | MS.gene85220:CDS |
| GCAAACACGTGCAGACCAAA+TGG | 0.512386 | 2.4:-4428210 | None:intergenic |
| TACTGGTGTTAATTCAGTAC+AGG | 0.515915 | 2.4:+4427834 | MS.gene85220:CDS |
| TCATGTGCAGCGATCAAAGC+AGG | 0.519327 | 2.4:+4428304 | MS.gene85220:CDS |
| ACATGGTGGGTAGCTTCAAT+GGG | 0.520184 | 2.4:-4424941 | None:intergenic |
| TGTTTGGTAAGCAAGAAATA+GGG | 0.520746 | 2.4:-4426887 | None:intergenic |
| TAAAGTCCTCCATATCTCAT+TGG | 0.522533 | 2.4:-4425752 | None:intergenic |
| GAAGCTGTCACTAAGAACTT+TGG | 0.524205 | 2.4:+4428488 | MS.gene85220:CDS |
| TTCACCTCCCTTGATCACCT+TGG | 0.525217 | 2.4:-4427800 | None:intergenic |
| AAGATCCTTTGATACTGAAT+GGG | 0.527419 | 2.4:-4425831 | None:intergenic |
| CAAAACTCTCCACCACTGAA+TGG | 0.531049 | 2.4:-4428949 | None:intergenic |
| CAGGGAAACAGTTGGTGCAA+TGG | 0.536764 | 2.4:+4427728 | MS.gene85220:CDS |
| GGAAGCAAAGTACATAGAAA+GGG | 0.540879 | 2.4:+4426971 | MS.gene85220:CDS |
| TGAATTTGTAGACTATTCCA+AGG | 0.543867 | 2.4:+4427686 | MS.gene85220:intron |
| GCATCAGTAAAAGGTGGTGT+TGG | 0.545185 | 2.4:+4428186 | MS.gene85220:CDS |
| AATAAGAATCCATTAACCAT+TGG | 0.548372 | 2.4:+4427109 | MS.gene85220:CDS |
| CTGTTTGGGGAAATATTGTG+TGG | 0.551490 | 2.4:+4425807 | MS.gene85220:CDS |
| CAGCTGAAGGAACAGGAATG+TGG | 0.551552 | 2.4:+4427059 | MS.gene85220:CDS |
| TATCTGACGGTTGAGATGGG+TGG | 0.553345 | 2.4:-4425883 | None:intergenic |
| GTTCCTTCAGCTGAATGTAA+AGG | 0.562040 | 2.4:-4427049 | None:intergenic |
| AGCTGAAGGAACAGGAATGT+GGG | 0.562527 | 2.4:+4427060 | MS.gene85220:CDS |
| AGTGACAGCTTCTCATGAAG+TGG | 0.562807 | 2.4:-4428477 | None:intergenic |
| CATCCTTTACATTCAGCTGA+AGG | 0.563353 | 2.4:+4427046 | MS.gene85220:CDS |
| TTATCATGGATTGCTAATGT+AGG | 0.564154 | 2.4:-4429010 | None:intergenic |
| GTTGTTGATGATGTCAAGAA+AGG | 0.565288 | 2.4:+4427382 | MS.gene85220:CDS |
| CTATCTGGCTTCATAAATCA+GGG | 0.565560 | 2.4:+4427710 | MS.gene85220:CDS |
| GCTTACCAAACAGACTGTTA+GGG | 0.565944 | 2.4:+4426898 | MS.gene85220:CDS |
| CCGTTGATCCAATTCTTGAG+AGG | 0.568960 | 2.4:-4425040 | None:intergenic |
| GGTCTTGATACATCTATGAA+TGG | 0.571013 | 2.4:+4427130 | MS.gene85220:CDS |
| TCTCAAGAGTTCGGTAAACA+TGG | 0.574499 | 2.4:-4424958 | None:intergenic |
| GACCCAACTACTTCTTGGCT+AGG | 0.576656 | 2.4:+4426920 | MS.gene85220:CDS |
| TTTGCCACCTGGAAGTATTG+TGG | 0.577652 | 2.4:-4425930 | None:intergenic |
| CTTCTTGGCTAGGAAAAGAT+GGG | 0.582861 | 2.4:+4426930 | MS.gene85220:CDS |
| GTGGGCCCATTCAGTATCAA+AGG | 0.592486 | 2.4:+4425826 | MS.gene85220:CDS |
| ATCCACAAAAGTCCCATATG+TGG | 0.593272 | 2.4:-4428448 | None:intergenic |
| AGAATGATATGACCACATAT+GGG | 0.594872 | 2.4:+4428436 | MS.gene85220:CDS |
| CAAGAGTTCGGTAAACATGG+TGG | 0.598399 | 2.4:-4424955 | None:intergenic |
| CATAGATGTATCAAGACCAA+TGG | 0.605287 | 2.4:-4427125 | None:intergenic |
| TGGCCCACCAAGGTGATCAA+GGG | 0.606547 | 2.4:+4427793 | MS.gene85220:CDS |
| TGTTTGGGGAAATATTGTGT+GGG | 0.611046 | 2.4:+4425808 | MS.gene85220:CDS |
| GTGACAGCTTCTCATGAAGT+GGG | 0.617462 | 2.4:-4428476 | None:intergenic |
| AAGAGTTCGGTAAACATGGT+GGG | 0.619926 | 2.4:-4424954 | None:intergenic |
| GTAGGACCAATGAGATATGG+AGG | 0.621441 | 2.4:+4425746 | MS.gene85220:intron |
| TCATAAATCAGGGAAACAGT+TGG | 0.623557 | 2.4:+4427720 | MS.gene85220:CDS |
| GGGTGGATTGCATGATCCAA+TGG | 0.626420 | 2.4:-4425866 | None:intergenic |
| CCCAGTCAATTGGCCCACCA+AGG | 0.627984 | 2.4:+4427783 | MS.gene85220:CDS |
| ACAGATTGACCATTCAGTGG+TGG | 0.630975 | 2.4:+4428940 | MS.gene85220:intron |
| CCTCTCAAGAATTGGATCAA+CGG | 0.632578 | 2.4:+4425040 | MS.gene85220:CDS |
| AATGGACATGCAGACCCCAA+TGG | 0.633436 | 2.4:+4425202 | MS.gene85220:intron |
| TTGATGATGTCAAGAAAGGA+TGG | 0.633579 | 2.4:+4427386 | MS.gene85220:CDS |
| AATCCAAAAGGTGCTGTTTG+GGG | 0.637524 | 2.4:+4425794 | MS.gene85220:CDS |
| CCCACCAAGGTGATCAAGGG+AGG | 0.661740 | 2.4:+4427796 | MS.gene85220:CDS |
| GAATTTGTAGACTATTCCAA+GGG | 0.667573 | 2.4:+4427687 | MS.gene85220:intron |
| AAGGGTGCATCAGTAAAAGG+TGG | 0.677299 | 2.4:+4428180 | MS.gene85220:CDS |
| TTGACAGATTGACCATTCAG+TGG | 0.705722 | 2.4:+4428937 | MS.gene85220:intron |
| AGGGATTGAACTAACCATTG+GGG | 0.722099 | 2.4:-4425216 | None:intergenic |
| TCAGCCACAATACTTCCAGG+TGG | 0.756866 | 2.4:+4425926 | MS.gene85220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCACTTTAATATAAA+AGG | - | chr2.4:4425719-4425738 | None:intergenic | 10.0% |
| !! | ATATTATATAGTTAAAATGT+TGG | + | chr2.4:4425372-4425391 | MS.gene85220:intron | 10.0% |
| !!! | ATTAGTGATATAATTTTTTA+GGG | + | chr2.4:4427534-4427553 | MS.gene85220:intron | 10.0% |
| !!! | GTTTTAATTTTACTAATTTA+TGG | + | chr2.4:4428520-4428539 | MS.gene85220:intron | 10.0% |
| !! | AAAAAAATAATATTGTACAG+GGG | + | chr2.4:4426644-4426663 | MS.gene85220:intron | 15.0% |
| !! | AATATAAATGCTATATATAG+AGG | + | chr2.4:4425338-4425357 | MS.gene85220:intron | 15.0% |
| !! | AATTATTGGTACATAATTTA+TGG | - | chr2.4:4428342-4428361 | None:intergenic | 15.0% |
| !! | ATTTATATATTTGAGTATGT+TGG | - | chr2.4:4426519-4426538 | None:intergenic | 15.0% |
| !! | CAAAAAAATAATATTGTACA+GGG | + | chr2.4:4426643-4426662 | MS.gene85220:intron | 15.0% |
| !! | TCAAAAAAATAATATTGTAC+AGG | + | chr2.4:4426642-4426661 | MS.gene85220:intron | 15.0% |
| !!! | AAAGTAAAAATTTTGTTGAT+TGG | + | chr2.4:4427011-4427030 | MS.gene85220:CDS | 15.0% |
| !!! | AAATAGTTTATTGATTTCTT+TGG | + | chr2.4:4428666-4428685 | MS.gene85220:intron | 15.0% |
| !!! | AAGTAAAAATTTTGTTGATT+GGG | + | chr2.4:4427012-4427031 | MS.gene85220:CDS | 15.0% |
| !!! | ATATCTTTTAATACTTTGAT+AGG | + | chr2.4:4428397-4428416 | MS.gene85220:intron | 15.0% |
| !!! | GATTAGTGATATAATTTTTT+AGG | + | chr2.4:4427533-4427552 | MS.gene85220:intron | 15.0% |
| !!! | GTACAATATTATTTTTTTGA+AGG | - | chr2.4:4426642-4426661 | None:intergenic | 15.0% |
| !!! | TAAGTTTGTTTTGAAATTAT+TGG | - | chr2.4:4428356-4428375 | None:intergenic | 15.0% |
| !! | AAATACAACCTATATAAGAA+AGG | + | chr2.4:4428008-4428027 | MS.gene85220:intron | 20.0% |
| !! | AATACAACCTATATAAGAAA+GGG | + | chr2.4:4428009-4428028 | MS.gene85220:intron | 20.0% |
| !! | AGCATTTATATTTGACAAAT+GGG | - | chr2.4:4425330-4425349 | None:intergenic | 20.0% |
| !! | ATATAGTTAAAATGTTGGAA+TGG | + | chr2.4:4425377-4425396 | MS.gene85220:intron | 20.0% |
| !! | GATTAAAATATTTAGCACAA+GGG | - | chr2.4:4425117-4425136 | None:intergenic | 20.0% |
| !! | TAGCATTTATATTTGACAAA+TGG | - | chr2.4:4425331-4425350 | None:intergenic | 20.0% |
| !! | TGATTAAAATATTTAGCACA+AGG | - | chr2.4:4425118-4425137 | None:intergenic | 20.0% |
| !! | TTGTTATATGCTTTCAATAA+TGG | + | chr2.4:4429037-4429056 | MS.gene85220:CDS | 20.0% |
| !!! | AAAATTTGTTAAATAGTCCA+GGG | - | chr2.4:4425559-4425578 | None:intergenic | 20.0% |
| !!! | AAATTTAAAACATGTGTCAT+CGG | - | chr2.4:4428795-4428814 | None:intergenic | 20.0% |
| !!! | AAGTGAATTTTTGTTTTTGT+AGG | + | chr2.4:4425728-4425747 | MS.gene85220:intron | 20.0% |
| !!! | AGAATGTGTTTTTAATTCAA+GGG | - | chr2.4:4426292-4426311 | None:intergenic | 20.0% |
| !!! | AGTAGATGTTTTGTTTTTTT+TGG | + | chr2.4:4425652-4425671 | MS.gene85220:intron | 20.0% |
| !!! | ATAGTTTTTACATGTCAATA+TGG | + | chr2.4:4427859-4427878 | MS.gene85220:intron | 20.0% |
| !!! | CAAAAACATTTTTTGATGAT+GGG | + | chr2.4:4427314-4427333 | MS.gene85220:CDS | 20.0% |
| !!! | CAAAATTTGCTAACTTTATA+TGG | + | chr2.4:4428708-4428727 | MS.gene85220:intron | 20.0% |
| !!! | CATATAAAGTTAGCAAATTT+TGG | - | chr2.4:4428710-4428729 | None:intergenic | 20.0% |
| !!! | TAAAATTTGTTAAATAGTCC+AGG | - | chr2.4:4425560-4425579 | None:intergenic | 20.0% |
| !!! | TAGAATGTGTTTTTAATTCA+AGG | - | chr2.4:4426293-4426312 | None:intergenic | 20.0% |
| !!! | TCAAAAACATTTTTTGATGA+TGG | + | chr2.4:4427313-4427332 | MS.gene85220:CDS | 20.0% |
| !!! | TTTTGAACTTGATGATTATT+TGG | - | chr2.4:4425983-4426002 | None:intergenic | 20.0% |
| !!! | TTTTTGGATGAAAAAAAGTT+AGG | + | chr2.4:4425688-4425707 | MS.gene85220:intron | 20.0% |
| ! | AAACATGATCACTATTTGAT+TGG | + | chr2.4:4427196-4427215 | MS.gene85220:CDS | 25.0% |
| ! | AAAGCAAAGTAGAAATTAGT+TGG | - | chr2.4:4425148-4425167 | None:intergenic | 25.0% |
| ! | AACATGATCACTATTTGATT+GGG | + | chr2.4:4427197-4427216 | MS.gene85220:CDS | 25.0% |
| ! | AAGAATAGAAGAATCTTGTT+GGG | + | chr2.4:4427337-4427356 | MS.gene85220:CDS | 25.0% |
| ! | AAGAGAGTTAGCAATAAAAT+TGG | - | chr2.4:4424893-4424912 | None:intergenic | 25.0% |
| ! | AAGTTCATTTACACTATGTT+TGG | + | chr2.4:4426105-4426124 | MS.gene85220:intron | 25.0% |
| ! | AATAAGAATCCATTAACCAT+TGG | + | chr2.4:4427109-4427128 | MS.gene85220:CDS | 25.0% |
| ! | AATGTGTTGAGATATGATTA+TGG | + | chr2.4:4427277-4427296 | MS.gene85220:CDS | 25.0% |
| ! | AGAAATAGAGTAGATTTGAT+GGG | + | chr2.4:4426192-4426211 | MS.gene85220:intron | 25.0% |
| ! | AGACAAAAATGACCAAATAT+AGG | - | chr2.4:4428885-4428904 | None:intergenic | 25.0% |
| ! | ATGGAAGTGGTATAAAAAAT+TGG | - | chr2.4:4425305-4425324 | None:intergenic | 25.0% |
| ! | ATGTGTTGAGATATGATTAT+GGG | + | chr2.4:4427278-4427297 | MS.gene85220:CDS | 25.0% |
| ! | CAGATATCAACATAAGAATT+TGG | + | chr2.4:4428278-4428297 | MS.gene85220:CDS | 25.0% |
| ! | CGATAACAATAATATTGTAC+AGG | + | chr2.4:4426615-4426634 | MS.gene85220:intron | 25.0% |
| ! | GGAATCATAAACACAATAAT+TGG | + | chr2.4:4428541-4428560 | MS.gene85220:intron | 25.0% |
| ! | TAACTTTATATGGATGTAGA+TGG | + | chr2.4:4428718-4428737 | MS.gene85220:intron | 25.0% |
| ! | TATATTTGACAAATGGGTAA+TGG | - | chr2.4:4425324-4425343 | None:intergenic | 25.0% |
| ! | TATCCATTTGTCCAATAATT+CGG | - | chr2.4:4428136-4428155 | None:intergenic | 25.0% |
| ! | TGATATTAACACGTCAATAT+TGG | - | chr2.4:4427906-4427925 | None:intergenic | 25.0% |
| ! | TGGAAGTGGTATAAAAAATT+GGG | - | chr2.4:4425304-4425323 | None:intergenic | 25.0% |
| ! | TTAAATTAATCAATAGTCCC+TGG | + | chr2.4:4425539-4425558 | MS.gene85220:intron | 25.0% |
| !! | AATGGATTCTTATTTGATAC+TGG | - | chr2.4:4427103-4427122 | None:intergenic | 25.0% |
| !! | AATTTAAAACATGTGTCATC+GGG | - | chr2.4:4428794-4428813 | None:intergenic | 25.0% |
| !! | ATAAAGTTAGCAAATTTTGG+TGG | - | chr2.4:4428707-4428726 | None:intergenic | 25.0% |
| !! | ATGATTTTATCAATACTTCG+TGG | - | chr2.4:4428624-4428643 | None:intergenic | 25.0% |
| !! | CAAATTTTGTGTAGTCAAAA+GGG | + | chr2.4:4428162-4428181 | MS.gene85220:CDS | 25.0% |
| !! | TGAGAAAGACATAATTTTGA+TGG | - | chr2.4:4426793-4426812 | None:intergenic | 25.0% |
| !! | TGGAATTCATGTAAGTTTTA+GGG | + | chr2.4:4427411-4427430 | MS.gene85220:intron | 25.0% |
| !! | TTTTCCATTCTCTAAGTAAT+GGG | - | chr2.4:4426033-4426052 | None:intergenic | 25.0% |
| !! | TTTTTCCATTCTCTAAGTAA+TGG | - | chr2.4:4426034-4426053 | None:intergenic | 25.0% |
| !!! | AGAAAGACATAATTTTGATG+GGG | - | chr2.4:4426791-4426810 | None:intergenic | 25.0% |
| !!! | ATTTGGTCATTTTTGTCTTT+TGG | + | chr2.4:4428887-4428906 | MS.gene85220:intron | 25.0% |
| !!! | CTTTTGACTACACAAAATTT+GGG | - | chr2.4:4428163-4428182 | None:intergenic | 25.0% |
| !!! | GAGAAAGACATAATTTTGAT+GGG | - | chr2.4:4426792-4426811 | None:intergenic | 25.0% |
| !!! | GTGTATTTTTTTTCTTCTAC+AGG | + | chr2.4:4428068-4428087 | MS.gene85220:intron | 25.0% |
| !!! | TAAAGTTAGCAAATTTTGGT+GGG | - | chr2.4:4428706-4428725 | None:intergenic | 25.0% |
| !!! | TCATTTGAAGTGAAAGATTT+TGG | + | chr2.4:4428105-4428124 | MS.gene85220:CDS | 25.0% |
| !!! | TGAACTTGCATTTATTTTGT+TGG | - | chr2.4:4426092-4426111 | None:intergenic | 25.0% |
| !!! | TTTTGACTACACAAAATTTG+GGG | - | chr2.4:4428162-4428181 | None:intergenic | 25.0% |
| AAGATCCTTTGATACTGAAT+GGG | - | chr2.4:4425834-4425853 | None:intergenic | 30.0% | |
| AATTGTGATATACTAGTGCA+TGG | + | chr2.4:4427630-4427649 | MS.gene85220:intron | 30.0% | |
| ACATGTTATGCTGATCAAAA+TGG | + | chr2.4:4425184-4425203 | MS.gene85220:intron | 30.0% | |
| ACTGAATTAACACCAGTAAT+TGG | - | chr2.4:4427832-4427851 | None:intergenic | 30.0% | |
| AGAATGATATGACCACATAT+GGG | + | chr2.4:4428436-4428455 | MS.gene85220:CDS | 30.0% | |
| ATATCACTTTCTCAACTTGA+TGG | + | chr2.4:4426667-4426686 | MS.gene85220:intron | 30.0% | |
| ATCACCAAAAAATCCATTGA+TGG | + | chr2.4:4426054-4426073 | MS.gene85220:CDS | 30.0% | |
| GAAGAATAGAAGAATCTTGT+TGG | + | chr2.4:4427336-4427355 | MS.gene85220:CDS | 30.0% | |
| GAATTTGTAGACTATTCCAA+GGG | + | chr2.4:4427687-4427706 | MS.gene85220:intron | 30.0% | |
| GAGAAATAGAGTAGATTTGA+TGG | + | chr2.4:4426191-4426210 | MS.gene85220:intron | 30.0% | |
| TACATTAGCAATCCATGATA+AGG | + | chr2.4:4429012-4429031 | MS.gene85220:CDS | 30.0% | |
| TATCAAAGGATCTTGTGAAT+TGG | + | chr2.4:4425840-4425859 | MS.gene85220:CDS | 30.0% | |
| TGAATTTGTAGACTATTCCA+AGG | + | chr2.4:4427686-4427705 | MS.gene85220:intron | 30.0% | |
| TGTTTGGTAAGCAAGAAATA+GGG | - | chr2.4:4426890-4426909 | None:intergenic | 30.0% | |
| TTATCCTCAAATCCATTATC+CGG | - | chr2.4:4427253-4427272 | None:intergenic | 30.0% | |
| TTCTACCAATACAATCCAAA+AGG | + | chr2.4:4425782-4425801 | MS.gene85220:CDS | 30.0% | |
| TTTGATACTGGAAAGAAATC+AGG | - | chr2.4:4427091-4427110 | None:intergenic | 30.0% | |
| ! | AATGGGTCAGACATATTTTT+GGG | - | chr2.4:4426016-4426035 | None:intergenic | 30.0% |
| ! | ACATCCTGATTTTGTATAGT+AGG | + | chr2.4:4425409-4425428 | MS.gene85220:intron | 30.0% |
| ! | ATAAGGTTGATCATGATTTG+AGG | - | chr2.4:4424999-4425018 | None:intergenic | 30.0% |
| ! | CAACAACCTTTTATATCTGA+CGG | - | chr2.4:4425899-4425918 | None:intergenic | 30.0% |
| ! | CATATAACAAAGCCTTATCA+TGG | - | chr2.4:4429027-4429046 | None:intergenic | 30.0% |
| ! | CATCCTGATTTTGTATAGTA+GGG | + | chr2.4:4425410-4425429 | MS.gene85220:intron | 30.0% |
| ! | CCAAATTTTGTGTAGTCAAA+AGG | + | chr2.4:4428161-4428180 | MS.gene85220:CDS | 30.0% |
| ! | CTGGAATTCATGTAAGTTTT+AGG | + | chr2.4:4427410-4427429 | MS.gene85220:intron | 30.0% |
| ! | TCATCCAAAAAGTGTAGAAA+AGG | - | chr2.4:4425679-4425698 | None:intergenic | 30.0% |
| ! | TTATCATGGATTGCTAATGT+AGG | - | chr2.4:4429013-4429032 | None:intergenic | 30.0% |
| !! | CCTTTTGACTACACAAAATT+TGG | - | chr2.4:4428164-4428183 | None:intergenic | 30.0% |
| !! | TAATGGGTCAGACATATTTT+TGG | - | chr2.4:4426017-4426036 | None:intergenic | 30.0% |
| !! | TGAAGTGAAAGATTTTGGAA+AGG | + | chr2.4:4428110-4428129 | MS.gene85220:CDS | 30.0% |
| !!! | AGATTTTCAAGTTCTTTCAC+TGG | - | chr2.4:4427754-4427773 | None:intergenic | 30.0% |
| !!! | TACTTCGTGGTTTTATAATC+AGG | - | chr2.4:4428611-4428630 | None:intergenic | 30.0% |
| !!! | TTTATTTTGTTGGCAACAGT+AGG | - | chr2.4:4426082-4426101 | None:intergenic | 30.0% |
| AAGATGAACTCTCAAGAGTT+CGG | - | chr2.4:4424970-4424989 | None:intergenic | 35.0% | |
| AAGTGATAGGCAGTTCTATA+AGG | - | chr2.4:4425016-4425035 | None:intergenic | 35.0% | |
| AAGTGGCAATTTCTTTGGTT+TGG | - | chr2.4:4426833-4426852 | None:intergenic | 35.0% | |
| ACTCTCTTCTCTCTCATTTA+TGG | + | chr2.4:4424905-4424924 | MS.gene85220:CDS | 35.0% | |
| AGAGAAAGTGGCAATTTCTT+TGG | - | chr2.4:4426838-4426857 | None:intergenic | 35.0% | |
| AGATCACAAGATTGAATGCT+TGG | + | chr2.4:4429074-4429093 | MS.gene85220:CDS | 35.0% | |
| AGCTGAATGTAAAGGATGTT+TGG | - | chr2.4:4427044-4427063 | None:intergenic | 35.0% | |
| ATAGAAGAATCTTGTTGGGT+TGG | + | chr2.4:4427341-4427360 | MS.gene85220:CDS | 35.0% | |
| ATTCCTGTGTACAAAATTGC+TGG | - | chr2.4:4425956-4425975 | None:intergenic | 35.0% | |
| CAAGATCCTTTGATACTGAA+TGG | - | chr2.4:4425835-4425854 | None:intergenic | 35.0% | |
| CATAGATGTATCAAGACCAA+TGG | - | chr2.4:4427128-4427147 | None:intergenic | 35.0% | |
| CGTCAGATATAAAAGGTTGT+TGG | + | chr2.4:4425897-4425916 | MS.gene85220:CDS | 35.0% | |
| CTGTTTGGTAAGCAAGAAAT+AGG | - | chr2.4:4426891-4426910 | None:intergenic | 35.0% | |
| GAAATTGAGAAGAGAGAAAG+AGG | + | chr2.4:4426137-4426156 | MS.gene85220:intron | 35.0% | |
| GAGAATGATATGACCACATA+TGG | + | chr2.4:4428435-4428454 | MS.gene85220:CDS | 35.0% | |
| GATATAAAAGGTTGTTGGTC+AGG | + | chr2.4:4425902-4425921 | MS.gene85220:CDS | 35.0% | |
| GCATGTACCCTTTCTTATAT+AGG | - | chr2.4:4428019-4428038 | None:intergenic | 35.0% | |
| GGAAGCAAAGTACATAGAAA+GGG | + | chr2.4:4426971-4426990 | MS.gene85220:CDS | 35.0% | |
| GGTCTTGATACATCTATGAA+TGG | + | chr2.4:4427130-4427149 | MS.gene85220:CDS | 35.0% | |
| GTATCAAGACCAATGGTTAA+TGG | - | chr2.4:4427121-4427140 | None:intergenic | 35.0% | |
| TAAAGTCCTCCATATCTCAT+TGG | - | chr2.4:4425755-4425774 | None:intergenic | 35.0% | |
| TAGAAGAATCTTGTTGGGTT+GGG | + | chr2.4:4427342-4427361 | MS.gene85220:CDS | 35.0% | |
| TCATAAATCAGGGAAACAGT+TGG | + | chr2.4:4427720-4427739 | MS.gene85220:CDS | 35.0% | |
| TCTCAACCGTCAGATATAAA+AGG | + | chr2.4:4425890-4425909 | MS.gene85220:CDS | 35.0% | |
| TGATCAGCATAACATGTCAA+AGG | - | chr2.4:4425181-4425200 | None:intergenic | 35.0% | |
| TGATGTTAGACATGTGCTTA+AGG | + | chr2.4:4427156-4427175 | MS.gene85220:CDS | 35.0% | |
| TGGAAGCAAAGTACATAGAA+AGG | + | chr2.4:4426970-4426989 | MS.gene85220:CDS | 35.0% | |
| TGGGACTTATGATACTGTTA+AGG | + | chr2.4:4427216-4427235 | MS.gene85220:CDS | 35.0% | |
| TGTCCCTACTATACAAAATC+AGG | - | chr2.4:4425416-4425435 | None:intergenic | 35.0% | |
| TGTTAAGGATGTCTTTGTTC+CGG | + | chr2.4:4427231-4427250 | MS.gene85220:CDS | 35.0% | |
| TGTTTGGGGAAATATTGTGT+GGG | + | chr2.4:4425808-4425827 | MS.gene85220:CDS | 35.0% | |
| TTATATCTGACGGTTGAGAT+GGG | - | chr2.4:4425889-4425908 | None:intergenic | 35.0% | |
| TTTATATCTGACGGTTGAGA+TGG | - | chr2.4:4425890-4425909 | None:intergenic | 35.0% | |
| TTTGTAGGACCAATGAGATA+TGG | + | chr2.4:4425743-4425762 | MS.gene85220:intron | 35.0% | |
| ! | AAACCAGCAATTTTGTACAC+AGG | + | chr2.4:4425950-4425969 | MS.gene85220:CDS | 35.0% |
| ! | ACATGTGCTTAAGGTTAGTT+TGG | + | chr2.4:4427165-4427184 | MS.gene85220:CDS | 35.0% |
| ! | ACTTTCTCAACTTGATGGAT+GGG | + | chr2.4:4426672-4426691 | MS.gene85220:intron | 35.0% |
| ! | CTATCTGGCTTCATAAATCA+GGG | + | chr2.4:4427710-4427729 | MS.gene85220:CDS | 35.0% |
| ! | GGTGAATTGATTCCAATTAC+TGG | + | chr2.4:4427817-4427836 | MS.gene85220:CDS | 35.0% |
| ! | TACTGGTGTTAATTCAGTAC+AGG | + | chr2.4:4427834-4427853 | MS.gene85220:CDS | 35.0% |
| ! | TGGTCCTTTTCTACACTTTT+TGG | + | chr2.4:4425672-4425691 | MS.gene85220:intron | 35.0% |
| !! | GGGTATTGGAGAGTATTAAT+TGG | + | chr2.4:4426950-4426969 | MS.gene85220:CDS | 35.0% |
| !! | GTTGTTGATGATGTCAAGAA+AGG | + | chr2.4:4427382-4427401 | MS.gene85220:CDS | 35.0% |
| !! | TTGATGATGTCAAGAAAGGA+TGG | + | chr2.4:4427386-4427405 | MS.gene85220:CDS | 35.0% |
| !! | TTTTGGAAAGGCCGAATTAT+TGG | + | chr2.4:4428122-4428141 | MS.gene85220:CDS | 35.0% |
| !!! | GGTTCCATCAATGGATTTTT+TGG | - | chr2.4:4426061-4426080 | None:intergenic | 35.0% |
| !!! | GTCAGACATATTTTTGGGTA+TGG | - | chr2.4:4426011-4426030 | None:intergenic | 35.0% |
| AAGAGTTCGGTAAACATGGT+GGG | - | chr2.4:4424957-4424976 | None:intergenic | 40.0% | |
| ACTTCCAACCTCTCAAGAAT+TGG | + | chr2.4:4425032-4425051 | MS.gene85220:CDS | 40.0% | |
| ACTTCTTGGCTAGGAAAAGA+TGG | + | chr2.4:4426929-4426948 | MS.gene85220:CDS | 40.0% | |
| AGAGGGATTGAACTAACCAT+TGG | - | chr2.4:4425221-4425240 | None:intergenic | 40.0% | |
| AGGCCGAATTATTGGACAAA+TGG | + | chr2.4:4428130-4428149 | MS.gene85220:CDS | 40.0% | |
| AGGGATTGAACTAACCATTG+GGG | - | chr2.4:4425219-4425238 | None:intergenic | 40.0% | |
| ATCCACAAAAGTCCCATATG+TGG | - | chr2.4:4428451-4428470 | None:intergenic | 40.0% | |
| CACTTTCTCAACTTGATGGA+TGG | + | chr2.4:4426671-4426690 | MS.gene85220:intron | 40.0% | |
| CATCCTTTACATTCAGCTGA+AGG | + | chr2.4:4427046-4427065 | MS.gene85220:CDS | 40.0% | |
| CCTCTCAAGAATTGGATCAA+CGG | + | chr2.4:4425040-4425059 | MS.gene85220:CDS | 40.0% | |
| CTGACCCATTACTTAGAGAA+TGG | + | chr2.4:4426026-4426045 | MS.gene85220:CDS | 40.0% | |
| CTGTTTGGGGAAATATTGTG+TGG | + | chr2.4:4425807-4425826 | MS.gene85220:CDS | 40.0% | |
| CTTCTTGGCTAGGAAAAGAT+GGG | + | chr2.4:4426930-4426949 | MS.gene85220:CDS | 40.0% | |
| CTTCTTTCTTCGCAAATCTG+AGG | + | chr2.4:4426746-4426765 | MS.gene85220:intron | 40.0% | |
| GAAGCTGTCACTAAGAACTT+TGG | + | chr2.4:4428488-4428507 | MS.gene85220:CDS | 40.0% | |
| GAGGGATTGAACTAACCATT+GGG | - | chr2.4:4425220-4425239 | None:intergenic | 40.0% | |
| GATGTCTTTGTTCCGGATAA+TGG | + | chr2.4:4427238-4427257 | MS.gene85220:CDS | 40.0% | |
| GCTTACCAAACAGACTGTTA+GGG | + | chr2.4:4426898-4426917 | MS.gene85220:CDS | 40.0% | |
| GGATGTAGATGGTCAAGATA+TGG | + | chr2.4:4428729-4428748 | MS.gene85220:intron | 40.0% | |
| GTTCCTTCAGCTGAATGTAA+AGG | - | chr2.4:4427052-4427071 | None:intergenic | 40.0% | |
| TACGTATGAACCCAGTCAAT+TGG | + | chr2.4:4427773-4427792 | MS.gene85220:CDS | 40.0% | |
| TCTCAAGAGTTCGGTAAACA+TGG | - | chr2.4:4424961-4424980 | None:intergenic | 40.0% | |
| TCTTGTGAATTGGACACCAT+TGG | + | chr2.4:4425850-4425869 | MS.gene85220:CDS | 40.0% | |
| TGATCCAATTCTTGAGAGGT+TGG | - | chr2.4:4425039-4425058 | None:intergenic | 40.0% | |
| TGCTTACCAAACAGACTGTT+AGG | + | chr2.4:4426897-4426916 | MS.gene85220:CDS | 40.0% | |
| TTACATTCAGCTGAAGGAAC+AGG | + | chr2.4:4427052-4427071 | MS.gene85220:CDS | 40.0% | |
| TTCCTAGCCAAGAAGTAGTT+GGG | - | chr2.4:4426925-4426944 | None:intergenic | 40.0% | |
| TTGACAGATTGACCATTCAG+TGG | + | chr2.4:4428937-4428956 | MS.gene85220:intron | 40.0% | |
| TTTCCTAGCCAAGAAGTAGT+TGG | - | chr2.4:4426926-4426945 | None:intergenic | 40.0% | |
| ! | CAAAAGGGTGCATCAGTAAA+AGG | + | chr2.4:4428177-4428196 | MS.gene85220:CDS | 40.0% |
| ! | CAGCACCTTTTGGATTGTAT+TGG | - | chr2.4:4425790-4425809 | None:intergenic | 40.0% |
| ! | GAGAGAAGTATGAGAGAAAG+TGG | - | chr2.4:4426850-4426869 | None:intergenic | 40.0% |
| ! | GCTATCTGGCTTCATAAATC+AGG | + | chr2.4:4427709-4427728 | MS.gene85220:CDS | 40.0% |
| !! | AATCCAAAAGGTGCTGTTTG+GGG | + | chr2.4:4425794-4425813 | MS.gene85220:CDS | 40.0% |
| !! | ACAATCCAAAAGGTGCTGTT+TGG | + | chr2.4:4425792-4425811 | MS.gene85220:CDS | 40.0% |
| !! | CAATCCAAAAGGTGCTGTTT+GGG | + | chr2.4:4425793-4425812 | MS.gene85220:CDS | 40.0% |
| !! | TGACAAATGGGTAATGGAAG+TGG | - | chr2.4:4425318-4425337 | None:intergenic | 40.0% |
| !! | TGGCAATTTCTTTGGTTTGG+AGG | - | chr2.4:4426830-4426849 | None:intergenic | 40.0% |
| !! | TGTTCCGGATAATGGATTTG+AGG | + | chr2.4:4427246-4427265 | MS.gene85220:CDS | 40.0% |
| ACAGATTGACCATTCAGTGG+TGG | + | chr2.4:4428940-4428959 | MS.gene85220:intron | 45.0% | |
| AGACTATTCCAAGGGCTATC+TGG | + | chr2.4:4427695-4427714 | MS.gene85220:intron | 45.0% | |
| AGAGAAAGAGGTGAGAGAGA+AGG | + | chr2.4:4426149-4426168 | MS.gene85220:intron | 45.0% | |
| AGCTGAAGGAACAGGAATGT+GGG | + | chr2.4:4427060-4427079 | MS.gene85220:CDS | 45.0% | |
| AGTGACAGCTTCTCATGAAG+TGG | - | chr2.4:4428480-4428499 | None:intergenic | 45.0% | |
| ATGGATGGGACTATGAGAGA+AGG | + | chr2.4:4426686-4426705 | MS.gene85220:intron | 45.0% | |
| CAAAACTCTCCACCACTGAA+TGG | - | chr2.4:4428952-4428971 | None:intergenic | 45.0% | |
| CAAGAGTTCGGTAAACATGG+TGG | - | chr2.4:4424958-4424977 | None:intergenic | 45.0% | |
| CATCAAGAGAGTCCAGAAGA+GGG | - | chr2.4:4425238-4425257 | None:intergenic | 45.0% | |
| CCGTTGATCCAATTCTTGAG+AGG | - | chr2.4:4425043-4425062 | None:intergenic | 45.0% | |
| CTATGAGAGAAGGGCAGAAT+AGG | + | chr2.4:4426696-4426715 | MS.gene85220:intron | 45.0% | |
| CTGCACGTGTTTGCTTCTAA+AGG | + | chr2.4:4428219-4428238 | MS.gene85220:CDS | 45.0% | |
| CTTGAGAGGTTGGAAGTGAT+AGG | - | chr2.4:4425029-4425048 | None:intergenic | 45.0% | |
| GATGTCAAGAAAGGATGGTC+TGG | + | chr2.4:4427391-4427410 | MS.gene85220:CDS | 45.0% | |
| GCAACAGTAGGTTCCATCAA+TGG | - | chr2.4:4426070-4426089 | None:intergenic | 45.0% | |
| GCATCAGTAAAAGGTGGTGT+TGG | + | chr2.4:4428186-4428205 | MS.gene85220:CDS | 45.0% | |
| GGCTAGGAAAAGATGGGTAT+TGG | + | chr2.4:4426936-4426955 | MS.gene85220:CDS | 45.0% | |
| GTAGGACCAATGAGATATGG+AGG | + | chr2.4:4425746-4425765 | MS.gene85220:intron | 45.0% | |
| GTGACAGCTTCTCATGAAGT+GGG | - | chr2.4:4428479-4428498 | None:intergenic | 45.0% | |
| TCATCAAGAGAGTCCAGAAG+AGG | - | chr2.4:4425239-4425258 | None:intergenic | 45.0% | |
| TGGATGGGACTATGAGAGAA+GGG | + | chr2.4:4426687-4426706 | MS.gene85220:intron | 45.0% | |
| TTAGGGACCCAACTACTTCT+TGG | + | chr2.4:4426915-4426934 | MS.gene85220:CDS | 45.0% | |
| TTATGAAGCCAGATAGCCCT+TGG | - | chr2.4:4427706-4427725 | None:intergenic | 45.0% | |
| ! | AAAGGTGGTGTTGGACCATT+TGG | + | chr2.4:4428195-4428214 | MS.gene85220:CDS | 45.0% |
| ! | AAGGGTGCATCAGTAAAAGG+TGG | + | chr2.4:4428180-4428199 | MS.gene85220:CDS | 45.0% |
| ! | GACCACATATGGGACTTTTG+TGG | + | chr2.4:4428446-4428465 | MS.gene85220:CDS | 45.0% |
| ! | GGTTAGTTCAATCCCTCTTC+TGG | + | chr2.4:4425223-4425242 | MS.gene85220:intron | 45.0% |
| ! | TTTCCCCAAACAGCACCTTT+TGG | - | chr2.4:4425800-4425819 | None:intergenic | 45.0% |
| !! | AAAATTGCTGGTTTGCCACC+TGG | - | chr2.4:4425944-4425963 | None:intergenic | 45.0% |
| !! | AACATGGTGGGTAGCTTCAA+TGG | - | chr2.4:4424945-4424964 | None:intergenic | 45.0% |
| !! | ACATGGTGGGTAGCTTCAAT+GGG | - | chr2.4:4424944-4424963 | None:intergenic | 45.0% |
| !! | CATTCAGTGGTGGAGAGTTT+TGG | + | chr2.4:4428950-4428969 | MS.gene85220:CDS | 45.0% |
| !! | TTTGCCACCTGGAAGTATTG+TGG | - | chr2.4:4425933-4425952 | None:intergenic | 45.0% |
| !!! | ATTTTAACTATATAATATAT+AGG | - | chr2.4:4425370-4425389 | None:intergenic | 5.0% |
| AATGGACATGCAGACCCCAA+TGG | + | chr2.4:4425202-4425221 | MS.gene85220:intron | 50.0% | |
| CAGCTGAAGGAACAGGAATG+TGG | + | chr2.4:4427059-4427078 | MS.gene85220:CDS | 50.0% | |
| GACCCAACTACTTCTTGGCT+AGG | + | chr2.4:4426920-4426939 | MS.gene85220:CDS | 50.0% | |
| GCAAACACGTGCAGACCAAA+TGG | - | chr2.4:4428213-4428232 | None:intergenic | 50.0% | |
| GTGGGCCCATTCAGTATCAA+AGG | + | chr2.4:4425826-4425845 | MS.gene85220:CDS | 50.0% | |
| GTTTGGAGGAGCAGAGAAAC+AGG | - | chr2.4:4426816-4426835 | None:intergenic | 50.0% | |
| TATCTGACGGTTGAGATGGG+TGG | - | chr2.4:4425886-4425905 | None:intergenic | 50.0% | |
| TCAGCCACAATACTTCCAGG+TGG | + | chr2.4:4425926-4425945 | MS.gene85220:CDS | 50.0% | |
| TCATGTGCAGCGATCAAAGC+AGG | + | chr2.4:4428304-4428323 | MS.gene85220:CDS | 50.0% | |
| TGAGGAGAACCACAAAAGCG+TGG | + | chr2.4:4426764-4426783 | MS.gene85220:intron | 50.0% | |
| TGGGTCCCTAACAGTCTGTT+TGG | - | chr2.4:4426906-4426925 | None:intergenic | 50.0% | |
| TTCACCTCCCTTGATCACCT+TGG | - | chr2.4:4427803-4427822 | None:intergenic | 50.0% | |
| ! | CAGGGAAACAGTTGGTGCAA+TGG | + | chr2.4:4427728-4427747 | MS.gene85220:CDS | 50.0% |
| ! | GAGGAGAACCACAAAAGCGT+GGG | + | chr2.4:4426765-4426784 | MS.gene85220:intron | 50.0% |
| !! | GGGTGGATTGCATGATCCAA+TGG | - | chr2.4:4425869-4425888 | None:intergenic | 50.0% |
| !! | GTGGAGAGTTTTGGTGGAGA+AGG | + | chr2.4:4428959-4428978 | MS.gene85220:CDS | 50.0% |
| !! | TCAGTGGTGGAGAGTTTTGG+TGG | + | chr2.4:4428953-4428972 | MS.gene85220:CDS | 50.0% |
| ACCTCCCTTGATCACCTTGG+TGG | - | chr2.4:4427800-4427819 | None:intergenic | 55.0% | |
| CCTCCCTTGATCACCTTGGT+GGG | - | chr2.4:4427799-4427818 | None:intergenic | 55.0% | |
| GGCTCAGCCACAATACTTCC+AGG | + | chr2.4:4425923-4425942 | MS.gene85220:CDS | 55.0% | |
| TGGCCCACCAAGGTGATCAA+GGG | + | chr2.4:4427793-4427812 | MS.gene85220:CDS | 55.0% | |
| TTGGCCCACCAAGGTGATCA+AGG | + | chr2.4:4427792-4427811 | MS.gene85220:CDS | 55.0% | |
| ! | ACCTTGGTGGGCCAATTGAC+TGG | - | chr2.4:4427787-4427806 | None:intergenic | 55.0% |
| ! | CCTTGGTGGGCCAATTGACT+GGG | - | chr2.4:4427786-4427805 | None:intergenic | 55.0% |
| CCCACCAAGGTGATCAAGGG+AGG | + | chr2.4:4427796-4427815 | MS.gene85220:CDS | 60.0% | |
| CCCAGTCAATTGGCCCACCA+AGG | + | chr2.4:4427783-4427802 | MS.gene85220:CDS | 60.0% | |
| ! | TGATGGGGCCCACGCTTTTG+TGG | - | chr2.4:4426776-4426795 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 4424878 | 4429123 | 4424878 | ID=MS.gene85220 |
| chr2.4 | mRNA | 4424878 | 4429123 | 4424878 | ID=MS.gene85220.t1;Parent=MS.gene85220 |
| chr2.4 | exon | 4424878 | 4425061 | 4424878 | ID=MS.gene85220.t1.exon1;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4424878 | 4425061 | 4424878 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4425215 | 4425223 | 4425215 | ID=MS.gene85220.t1.exon2;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4425215 | 4425223 | 4425215 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4425750 | 4426084 | 4425750 | ID=MS.gene85220.t1.exon3;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4425750 | 4426084 | 4425750 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4426875 | 4427420 | 4426875 | ID=MS.gene85220.t1.exon4;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4426875 | 4427420 | 4426875 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4427697 | 4427855 | 4427697 | ID=MS.gene85220.t1.exon5;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4427697 | 4427855 | 4427697 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4428090 | 4428325 | 4428090 | ID=MS.gene85220.t1.exon6;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4428090 | 4428325 | 4428090 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4428419 | 4428509 | 4428419 | ID=MS.gene85220.t1.exon7;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4428419 | 4428509 | 4428419 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| chr2.4 | exon | 4428944 | 4429123 | 4428944 | ID=MS.gene85220.t1.exon8;Parent=MS.gene85220.t1 |
| chr2.4 | CDS | 4428944 | 4429123 | 4428944 | ID=cds.MS.gene85220.t1;Parent=MS.gene85220.t1 |
| Gene Sequence |
| Protein sequence |
