AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36419


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36419.t1 MTR_4g094412 95.258 485 14 5 1 483 10 487 0.0 944
MS.gene36419.t1 MTR_4g094412 95.258 485 14 5 1 483 1 478 0.0 943
MS.gene36419.t1 MTR_7g009730 36.307 482 219 18 56 475 33 488 9.75e-54 190
MS.gene36419.t1 MTR_4g107970 39.869 306 161 8 12 300 17 316 9.26e-52 185
MS.gene36419.t1 MTR_4g107970 43.621 243 120 6 71 300 1 239 8.17e-50 178
MS.gene36419.t1 MTR_7g110720 41.107 253 102 6 221 472 171 377 3.46e-49 174
MS.gene36419.t1 MTR_7g110720 41.107 253 102 6 221 472 198 404 8.59e-49 173
MS.gene36419.t1 MTR_3g053330 42.742 248 103 8 223 469 235 444 2.11e-48 173
MS.gene36419.t1 MTR_2g023930 40.244 246 121 5 60 299 140 365 2.11e-48 175
MS.gene36419.t1 MTR_2g088000 33.700 454 225 15 46 469 148 555 2.19e-48 176
MS.gene36419.t1 MTR_4g132430 42.917 240 110 7 223 459 111 326 1.26e-42 155
MS.gene36419.t1 MTR_4g132430 32.458 419 223 13 46 459 97 460 2.50e-42 157
MS.gene36419.t1 MTR_2g045360 51.974 152 62 3 223 371 195 338 9.96e-41 151
MS.gene36419.t1 MTR_4g049760 62.376 101 38 0 224 324 275 375 1.70e-39 150
MS.gene36419.t1 MTR_4g049790 60.396 101 40 0 224 324 297 397 1.46e-37 145
MS.gene36419.t1 MTR_4g047580 31.095 283 176 5 55 324 90 366 2.81e-34 135
MS.gene36419.t1 MTR_4g007060 54.762 84 31 2 222 299 106 188 3.18e-26 108
MS.gene36419.t1 MTR_4g007060 54.762 84 31 2 222 299 140 222 4.90e-26 108
MS.gene36419.t1 MTR_3g106060 45.045 111 51 2 196 296 85 195 1.75e-25 106
MS.gene36419.t1 MTR_5g094430 50.526 95 46 1 221 315 234 327 4.96e-25 107
MS.gene36419.t1 MTR_5g094430 52.459 61 27 2 239 299 88 146 2.19e-12 69.3
MS.gene36419.t1 MTR_5g094430 50.526 95 46 1 221 315 212 305 5.32e-25 107
MS.gene36419.t1 MTR_5g094430 52.459 61 27 2 239 299 66 124 2.55e-12 68.9
MS.gene36419.t1 MTR_1g013760 43.810 105 59 0 219 323 120 224 1.70e-24 103
MS.gene36419.t1 MTR_1g013790 36.496 137 84 2 165 299 26 161 1.91e-24 102
MS.gene36419.t1 MTR_5g094430 50.526 95 46 1 221 315 346 439 2.58e-24 106
MS.gene36419.t1 MTR_5g094430 52.459 61 27 2 239 299 200 258 5.25e-12 68.6
MS.gene36419.t1 MTR_2g105060 53.086 81 33 2 224 299 149 229 2.61e-23 100
MS.gene36419.t1 MTR_2g105060 59.677 62 25 0 238 299 93 154 3.02e-23 98.6
MS.gene36419.t1 MTR_3g031220 53.846 78 35 1 223 300 349 425 3.51e-23 102
MS.gene36419.t1 MTR_3g031220 53.226 62 27 2 239 300 198 257 1.15e-14 76.6
MS.gene36419.t1 MTR_4g013260 51.899 79 37 1 223 301 320 397 4.37e-23 102
MS.gene36419.t1 MTR_4g013260 44.872 78 40 2 222 299 169 243 7.12e-15 77.4
MS.gene36419.t1 MTR_7g011820 44.444 117 58 3 220 330 387 502 6.76e-23 102
MS.gene36419.t1 MTR_7g011820 51.724 58 26 2 239 296 228 283 4.13e-11 65.5
MS.gene36419.t1 MTR_3g056100 48.958 96 45 2 221 313 253 347 8.45e-23 101
MS.gene36419.t1 MTR_3g056100 33.333 147 90 4 239 384 99 238 1.33e-12 70.1
MS.gene36419.t1 MTR_3g056100 55.696 79 34 1 221 299 240 317 9.00e-23 100
MS.gene36419.t1 MTR_3g056100 50.820 61 28 2 239 299 99 157 9.91e-12 67.4
MS.gene36419.t1 MTR_3g056100 55.000 80 35 1 221 300 397 475 9.95e-23 102
MS.gene36419.t1 MTR_3g056100 33.333 147 90 4 239 384 243 382 4.08e-12 68.9
MS.gene36419.t1 MTR_3g056100 55.000 80 35 1 221 300 384 462 1.07e-22 101
MS.gene36419.t1 MTR_3g056100 50.820 61 28 2 239 299 243 301 9.99e-12 67.8
MS.gene36419.t1 MTR_3g009470 50.000 90 44 1 223 312 479 567 1.40e-22 101
MS.gene36419.t1 MTR_3g009470 51.667 60 27 2 240 299 281 338 3.19e-12 69.3
MS.gene36419.t1 MTR_7g071120 53.165 79 36 1 223 301 308 385 1.41e-22 100
MS.gene36419.t1 MTR_7g071120 44.086 93 47 3 207 299 137 224 2.65e-14 75.5
MS.gene36419.t1 MTR_5g074400 53.846 78 35 1 223 300 404 480 1.71e-22 101
MS.gene36419.t1 MTR_5g074400 54.098 61 26 2 239 299 243 301 3.80e-14 75.1
MS.gene36419.t1 MTR_5g044695 82.979 47 8 0 223 269 61 107 2.90e-22 92.0
MS.gene36419.t1 MTR_3g104750 52.000 75 35 1 223 297 88 161 3.18e-22 93.6
MS.gene36419.t1 MTR_5g097490 50.000 86 42 1 224 309 237 321 3.93e-22 98.6
MS.gene36419.t1 MTR_5g042920 45.192 104 52 2 211 314 296 394 8.13e-22 98.2
MS.gene36419.t1 MTR_5g042920 39.623 106 51 4 205 299 106 209 1.13e-13 73.2
MS.gene36419.t1 MTR_6g038890 82.979 47 8 0 223 269 172 218 1.35e-21 93.6
MS.gene36419.t1 MTR_7g109800 44.944 89 48 1 223 311 129 216 1.96e-21 94.7
MS.gene36419.t1 MTR_2g033820 46.237 93 49 1 223 315 187 278 2.51e-21 95.9
MS.gene36419.t1 MTR_4g082580 48.276 87 44 1 224 310 263 348 5.21e-21 95.1
MS.gene36419.t1 MTR_7g080000 50.633 79 38 1 223 301 416 493 5.79e-21 96.7
MS.gene36419.t1 MTR_7g080020 50.633 79 38 1 223 301 477 554 6.32e-21 96.7
MS.gene36419.t1 MTR_1g015140 51.351 74 35 1 224 297 87 159 7.08e-21 89.7
MS.gene36419.t1 MTR_4g130900 51.250 80 38 1 221 300 341 419 9.00e-21 95.5
MS.gene36419.t1 MTR_7g100510 50.649 77 37 1 227 303 349 424 2.67e-20 93.6
MS.gene36419.t1 MTR_7g100510 46.250 80 37 3 240 319 190 263 3.47e-13 71.6
MS.gene36419.t1 MTR_7g109600 54.054 74 31 1 239 312 53 123 3.38e-20 90.5
MS.gene36419.t1 MTR_4g094908 38.095 126 49 2 196 321 242 338 3.59e-20 92.0
MS.gene36419.t1 MTR_4g094588 40.385 104 57 2 226 329 165 263 6.08e-20 91.3
MS.gene36419.t1 MTR_1g077780 38.519 135 73 5 188 315 5 136 7.09e-20 86.3
MS.gene36419.t1 MTR_7g028415 50.704 71 34 1 228 298 82 151 1.10e-19 86.7
MS.gene36419.t1 MTR_7g028710 50.704 71 34 1 228 298 82 151 1.10e-19 86.7
MS.gene36419.t1 MTR_1g086790 50.649 77 37 1 223 299 142 217 1.16e-19 90.1
MS.gene36419.t1 MTR_8g092010 48.000 75 38 1 226 300 95 168 6.34e-19 84.7
MS.gene36419.t1 MTR_5g016610 61.818 55 21 0 244 298 204 258 1.32e-18 86.3
MS.gene36419.t1 MTR_8g087000 56.923 65 28 0 239 303 77 141 1.64e-18 85.1
MS.gene36419.t1 MTR_8g087000 56.923 65 28 0 239 303 76 140 1.64e-18 85.1
MS.gene36419.t1 MTR_4g122530 48.718 78 39 1 223 300 192 268 1.69e-18 87.8
MS.gene36419.t1 MTR_7g079010 52.778 72 33 1 226 297 128 198 2.46e-18 84.3
MS.gene36419.t1 MTR_1g070455 57.895 57 24 0 240 296 294 350 2.66e-18 86.7
MS.gene36419.t1 MTR_5g091390 49.333 75 37 1 226 300 144 217 4.76e-18 85.1
MS.gene36419.t1 MTR_2g083870 49.367 79 40 0 230 308 71 149 5.43e-18 84.0
MS.gene36419.t1 MTR_1g009613 39.796 98 40 1 199 296 241 319 9.63e-18 84.7
MS.gene36419.t1 MTR_8g096730 41.463 82 47 1 224 305 55 135 1.03e-17 80.5
MS.gene36419.t1 MTR_8g028565 40.625 96 54 1 216 308 129 224 1.25e-17 84.3
MS.gene36419.t1 MTR_2g032030 48.000 75 39 0 240 314 268 342 2.32e-17 84.7
MS.gene36419.t1 MTR_2g032030 48.000 75 39 0 240 314 268 342 6.34e-17 83.2
MS.gene36419.t1 MTR_5g043880 44.086 93 50 2 223 314 108 199 7.85e-17 81.3
MS.gene36419.t1 MTR_3g095040 45.455 77 41 1 226 302 105 180 1.63e-16 78.6
MS.gene36419.t1 MTR_8g007270 47.297 74 38 1 223 296 138 210 1.85e-16 79.0
MS.gene36419.t1 MTR_4g127040 46.154 78 33 1 239 316 245 313 4.46e-16 79.3
MS.gene36419.t1 MTR_2g024350 38.000 100 48 2 240 325 9 108 5.19e-16 77.8
MS.gene36419.t1 MTR_2g016770 52.459 61 29 0 239 299 35 95 6.26e-16 77.0
MS.gene36419.t1 MTR_7g079040 50.769 65 32 0 244 308 159 223 6.39e-16 79.3
MS.gene36419.t1 MTR_2g016770 52.459 61 29 0 239 299 27 87 1.02e-15 76.3
MS.gene36419.t1 MTR_8g098945 43.836 73 41 0 236 308 126 198 1.10e-15 77.8
MS.gene36419.t1 MTR_3g095080 44.595 74 40 1 223 296 128 200 1.61e-15 75.9
MS.gene36419.t1 MTR_3g095080 44.595 74 40 1 223 296 152 224 1.85e-15 76.3
MS.gene36419.t1 MTR_3g108960 48.000 75 35 1 226 296 297 371 2.02e-15 78.6
MS.gene36419.t1 MTR_3g031220 53.226 62 27 2 239 300 198 257 4.32e-15 77.4
MS.gene36419.t1 MTR_2g024380 51.667 60 29 0 240 299 252 311 1.07e-14 76.6
MS.gene36419.t1 MTR_0117s0040 43.836 73 35 1 244 316 79 145 1.55e-14 73.6
MS.gene36419.t1 MTR_7g062220 47.222 72 36 2 226 296 110 180 1.77e-14 74.7
MS.gene36419.t1 MTR_1g099600 46.377 69 37 0 240 308 186 254 2.20e-14 74.3
MS.gene36419.t1 MTR_8g092140 51.667 60 28 1 237 296 158 216 2.66e-14 72.8
MS.gene36419.t1 MTR_4g007060 50.820 61 23 2 222 276 140 199 3.82e-14 72.4
MS.gene36419.t1 MTR_5g074200 36.458 96 59 2 239 334 220 313 1.72e-13 72.0
MS.gene36419.t1 MTR_6g086555 46.250 80 41 2 222 300 189 267 3.28e-13 71.6
MS.gene36419.t1 MTR_3g009470 51.667 60 27 2 240 299 281 338 1.76e-12 69.7
MS.gene36419.t1 MTR_7g109600 51.852 54 23 1 259 312 7 57 4.56e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36419.t1 AT1G68150 46.457 381 141 13 1 365 27 360 1.67e-85 268
MS.gene36419.t1 AT5G15130 41.611 298 137 8 43 313 14 301 1.71e-54 191
MS.gene36419.t1 AT5G15130 43.494 269 116 7 71 313 1 259 7.20e-53 186
MS.gene36419.t1 AT4G04450 45.736 258 113 5 216 469 175 409 2.45e-52 183
MS.gene36419.t1 AT4G04450 45.736 258 113 5 216 469 269 503 1.03e-51 183
MS.gene36419.t1 AT1G62300 32.485 511 257 16 4 470 73 539 3.12e-48 174
MS.gene36419.t1 AT1G18860 41.379 290 124 6 223 469 223 509 1.17e-46 170
MS.gene36419.t1 AT4G01720 46.559 247 107 5 221 466 221 443 6.87e-45 164
MS.gene36419.t1 AT4G22070 35.032 314 173 4 10 299 51 357 2.87e-43 160
MS.gene36419.t1 AT4G22070 35.032 314 173 4 10 299 51 357 2.87e-43 160
MS.gene36419.t1 AT4G22070 35.032 314 173 4 10 299 51 357 2.87e-43 160
MS.gene36419.t1 AT4G22070 35.032 314 173 4 10 299 51 357 2.87e-43 160
MS.gene36419.t1 AT1G69810 34.191 272 146 8 60 313 22 278 5.05e-36 137
MS.gene36419.t1 AT1G69810 63.043 92 33 1 223 313 129 220 3.55e-35 134
MS.gene36419.t1 AT4G31800 50.962 104 45 3 224 322 156 258 6.70e-26 107
MS.gene36419.t1 AT4G31800 50.962 104 45 3 224 322 91 193 7.19e-26 106
MS.gene36419.t1 AT1G80840 58.462 65 27 0 235 299 142 206 9.09e-25 104
MS.gene36419.t1 AT2G25000 61.905 63 24 0 237 299 101 163 1.93e-23 99.0
MS.gene36419.t1 AT2G25000 61.905 63 24 0 237 299 101 163 1.93e-23 99.0
MS.gene36419.t1 AT2G38470 41.463 123 71 1 223 345 346 467 3.24e-23 103
MS.gene36419.t1 AT2G38470 48.101 79 37 4 221 299 168 242 5.09e-14 74.7
MS.gene36419.t1 AT2G25000 61.905 63 24 0 237 299 144 206 3.74e-23 99.4
MS.gene36419.t1 AT2G25000 61.905 63 24 0 237 299 123 185 3.78e-23 98.6
MS.gene36419.t1 AT5G56270 55.128 78 34 1 223 300 471 547 6.55e-23 102
MS.gene36419.t1 AT5G56270 48.438 64 31 2 236 299 270 331 4.26e-11 65.9
MS.gene36419.t1 AT5G49520 34.884 172 73 5 223 371 205 360 9.59e-23 100
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 187 265 1.21e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 26 93 1.08e-11 67.0
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 187 265 1.21e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 26 93 1.08e-11 67.0
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 187 265 1.21e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 26 93 1.08e-11 67.0
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 187 265 1.21e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 26 93 1.08e-11 67.0
MS.gene36419.t1 AT5G26170 54.167 72 32 1 225 296 99 169 1.46e-22 95.1
MS.gene36419.t1 AT1G13960 48.352 91 42 2 209 299 230 315 2.67e-22 98.6
MS.gene36419.t1 AT1G13960 54.098 61 26 2 239 299 76 134 7.78e-14 73.2
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 291 369 3.05e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 130 197 1.66e-11 66.6
MS.gene36419.t1 AT1G29860 53.247 77 35 1 223 299 120 195 3.09e-22 97.1
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 323 401 3.35e-22 100
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 162 229 1.63e-11 67.0
MS.gene36419.t1 AT2G04880 53.247 77 35 1 225 301 269 344 3.88e-22 99.4
MS.gene36419.t1 AT2G04880 36.000 100 49 3 237 323 109 206 5.14e-13 71.2
MS.gene36419.t1 AT4G26640 53.750 80 36 1 221 300 363 441 4.15e-22 99.8
MS.gene36419.t1 AT4G26640 45.714 70 36 2 230 299 202 269 1.92e-11 66.6
MS.gene36419.t1 AT1G13960 47.917 96 44 3 204 299 379 468 4.39e-22 99.8
MS.gene36419.t1 AT1G13960 54.098 61 26 2 239 299 229 287 9.28e-14 73.9
MS.gene36419.t1 AT2G04880 53.247 77 35 1 225 301 293 368 6.04e-22 99.0
MS.gene36419.t1 AT2G04880 45.588 68 35 2 237 304 109 174 8.25e-13 70.9
MS.gene36419.t1 AT5G46350 45.536 112 56 3 226 336 170 277 7.20e-22 96.7
MS.gene36419.t1 AT3G01080 45.833 96 47 2 204 299 275 365 1.33e-21 97.4
MS.gene36419.t1 AT3G01080 45.833 96 47 2 204 299 313 403 1.72e-21 97.4
MS.gene36419.t1 AT4G30935 43.810 105 53 2 217 316 309 412 2.36e-21 97.1
MS.gene36419.t1 AT4G18170 51.282 78 37 1 223 300 156 232 3.09e-21 94.7
MS.gene36419.t1 AT2G03340 45.745 94 46 2 211 304 391 479 4.08e-21 96.7
MS.gene36419.t1 AT2G03340 54.098 61 26 2 239 299 250 308 4.36e-14 75.1
MS.gene36419.t1 AT5G13080 50.685 73 35 1 226 298 54 125 4.87e-21 89.7
MS.gene36419.t1 AT5G07100 50.649 77 37 1 223 299 125 200 1.72e-20 90.5
MS.gene36419.t1 AT5G07100 40.860 93 50 2 237 329 22 109 1.43e-13 70.5
MS.gene36419.t1 AT5G07100 50.649 77 37 1 223 299 125 200 1.72e-20 90.5
MS.gene36419.t1 AT5G07100 40.860 93 50 2 237 329 22 109 1.43e-13 70.5
MS.gene36419.t1 AT5G07100 50.649 77 37 1 223 299 125 200 1.72e-20 90.5
MS.gene36419.t1 AT5G07100 40.860 93 50 2 237 329 22 109 1.43e-13 70.5
MS.gene36419.t1 AT5G07100 50.649 77 37 1 223 299 125 200 1.72e-20 90.5
MS.gene36419.t1 AT5G07100 40.860 93 50 2 237 329 22 109 1.43e-13 70.5
MS.gene36419.t1 AT5G07100 50.649 77 37 1 223 299 218 293 3.12e-20 91.7
MS.gene36419.t1 AT5G07100 40.860 93 50 2 237 329 115 202 6.89e-13 69.7
MS.gene36419.t1 AT3G62340 42.105 114 61 2 226 335 105 217 3.88e-20 90.9
MS.gene36419.t1 AT2G47260 44.898 98 48 3 223 315 158 254 5.41e-20 91.3
MS.gene36419.t1 AT1G29280 50.704 71 35 0 230 300 65 135 8.29e-20 89.4
MS.gene36419.t1 AT3G04670 66.038 53 18 0 244 296 267 319 2.17e-19 89.7
MS.gene36419.t1 AT5G41570 51.389 72 34 1 226 297 85 155 2.85e-19 85.9
MS.gene36419.t1 AT4G24240 48.315 89 40 2 223 305 259 347 3.16e-19 89.4
MS.gene36419.t1 AT2G23320 51.899 79 34 1 224 298 221 299 3.44e-19 88.6
MS.gene36419.t1 AT4G26440 32.984 191 92 7 222 406 355 515 3.85e-19 90.9
MS.gene36419.t1 AT5G64810 50.704 71 34 1 226 296 97 166 7.64e-19 85.1
MS.gene36419.t1 AT1G64000 51.389 72 34 1 226 297 101 171 1.12e-18 84.7
MS.gene36419.t1 AT2G30590 61.404 57 21 1 244 299 318 374 1.15e-18 88.2
MS.gene36419.t1 AT4G31550 40.594 101 41 1 196 296 222 303 1.24e-18 87.4
MS.gene36419.t1 AT5G28650 62.264 53 20 0 244 296 267 319 1.65e-18 87.0
MS.gene36419.t1 AT2G30250 48.718 78 39 1 223 300 312 388 1.71e-18 87.8
MS.gene36419.t1 AT2G24570 41.584 101 40 1 196 296 219 300 1.79e-18 86.7
MS.gene36419.t1 AT4G31550 40.816 98 39 1 199 296 224 302 1.85e-18 86.7
MS.gene36419.t1 AT1G55600 45.455 77 41 1 223 299 291 366 2.11e-18 88.2
MS.gene36419.t1 AT2G46130 52.778 72 33 1 226 297 17 87 2.76e-18 80.9
MS.gene36419.t1 AT1G69310 50.000 74 36 1 223 296 131 203 4.21e-18 85.1
MS.gene36419.t1 AT1G69310 50.000 74 36 1 223 296 131 203 4.21e-18 85.1
MS.gene36419.t1 AT1G69310 50.000 74 36 1 223 296 131 203 4.21e-18 85.1
MS.gene36419.t1 AT3G58710 45.161 93 48 1 230 322 61 150 7.94e-18 84.0
MS.gene36419.t1 AT3G58710 45.161 93 48 1 230 322 62 151 8.14e-18 84.0
MS.gene36419.t1 AT3G01970 50.000 72 35 1 225 296 51 121 8.58e-18 80.5
MS.gene36419.t1 AT2G37260 56.923 65 27 1 234 298 264 327 5.16e-17 82.8
MS.gene36419.t1 AT2G37260 40.566 106 55 4 214 315 58 159 1.97e-14 75.1
MS.gene36419.t1 AT2G37260 56.923 65 27 1 234 298 262 325 5.20e-17 82.8
MS.gene36419.t1 AT2G37260 40.566 106 55 4 214 315 56 157 2.22e-14 74.7
MS.gene36419.t1 AT1G30650 53.968 63 29 0 244 306 222 284 8.44e-17 82.8
MS.gene36419.t1 AT2G34830 52.239 67 32 0 240 306 216 282 1.04e-16 82.8
MS.gene36419.t1 AT2G37260 56.923 65 27 1 234 298 344 407 1.11e-16 82.4
MS.gene36419.t1 AT2G37260 42.857 105 47 5 214 309 138 238 4.74e-14 74.3
MS.gene36419.t1 AT2G34830 52.239 67 32 0 240 306 225 291 1.24e-16 82.4
MS.gene36419.t1 AT4G01250 48.571 70 36 0 239 308 128 197 1.58e-16 80.5
MS.gene36419.t1 AT2G44745 45.946 74 39 1 223 296 129 201 1.80e-16 79.0
MS.gene36419.t1 AT4G39410 47.297 74 38 1 223 296 207 279 1.99e-16 80.5
MS.gene36419.t1 AT5G52830 46.341 82 41 1 230 308 153 234 9.40e-16 79.0
MS.gene36419.t1 AT2G21900 45.455 66 35 1 234 299 104 168 1.59e-15 75.5
MS.gene36419.t1 AT4G23550 40.860 93 54 1 222 314 124 215 2.07e-15 77.4
MS.gene36419.t1 AT4G31800 56.897 58 20 2 224 276 156 213 2.26e-14 73.2
MS.gene36419.t1 AT5G43290 55.172 58 25 1 239 296 114 170 1.08e-13 71.6
MS.gene36419.t1 AT5G45050 48.438 64 33 0 244 307 1157 1220 1.78e-13 73.6
MS.gene36419.t1 AT5G45050 48.438 64 33 0 244 307 1185 1248 1.87e-13 73.6
MS.gene36419.t1 AT2G46130 48.611 72 32 2 226 297 17 83 2.13e-13 66.6
MS.gene36419.t1 AT5G45050 48.438 64 33 0 244 307 1046 1109 2.22e-13 73.6
MS.gene36419.t1 AT1G69310 45.946 74 35 2 223 296 131 199 3.10e-13 70.5
MS.gene36419.t1 AT5G24110 43.836 73 38 2 224 294 99 170 1.27e-11 65.9
MS.gene36419.t1 AT5G45260 43.590 78 42 1 239 314 1208 1285 3.51e-11 66.2
MS.gene36419.t1 AT2G40740 46.667 75 35 2 239 308 173 247 8.76e-11 63.2

Find 85 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAGTTCATTATTATTAT+TGG 0.182204 4.1:+19127082 None:intergenic
AATCCTAATATTTCAGATTA+TGG 0.198452 4.1:-19127230 MS.gene36419:CDS
ATTATTAGTGTAAGGATTAA+AGG 0.199622 4.1:+19127190 None:intergenic
ATATTTGAAGATTGGTTTAA+TGG 0.231617 4.1:+19127155 None:intergenic
AGCGGCTTCATTTATGTTAC+TGG 0.242571 4.1:-19127261 MS.gene36419:CDS
GAAACCCTAGCCTTTCTATT+AGG 0.250513 4.1:+19127847 None:intergenic
AAACCATAATCTGAAATATT+AGG 0.280244 4.1:+19127227 None:intergenic
ACTTTCCATCTCCATTTCTA+AGG 0.281935 4.1:+19128439 None:intergenic
ATATATACTTGTTTCCTAAC+TGG 0.294382 4.1:+19127598 None:intergenic
AGTATAAGTGAGAGTGATTT+GGG 0.310766 4.1:-19128033 MS.gene36419:CDS
GGATGTCAATGGAGAAAATA+TGG 0.317894 4.1:-19127688 MS.gene36419:CDS
AGGTTGATCAGTTGAATTAT+TGG 0.319022 4.1:+19127022 None:intergenic
TGCTTCTAATATTTGAAGAT+TGG 0.335707 4.1:+19127147 None:intergenic
TATTTGAAGATTGGTTTAAT+GGG 0.337890 4.1:+19127156 None:intergenic
GTAATATTGTTTGGTGGTAA+TGG 0.353117 4.1:+19128066 None:intergenic
AATTCCTTGGGATGGATCAT+TGG 0.353833 4.1:+19127118 None:intergenic
TGGATATTCATGATAGGGTT+TGG 0.367522 4.1:-19126905 MS.gene36419:CDS
ATTCCTTGGGATGGATCATT+GGG 0.374431 4.1:+19127119 None:intergenic
ATCTCATGAAATGATCTTGA+TGG 0.384052 4.1:+19128120 None:intergenic
TAGTATAAGTGAGAGTGATT+TGG 0.391243 4.1:-19128034 MS.gene36419:CDS
TTGCATCAGATCCTAAGTTT+AGG 0.396218 4.1:-19126842 MS.gene36419:CDS
TGTAAGGATTAAAGGATTGT+TGG 0.404802 4.1:+19127198 None:intergenic
ATCAGTTGAATTATTGGAGC+TGG 0.405735 4.1:+19127028 None:intergenic
TCATCATCAGTAATATTGTT+TGG 0.412086 4.1:+19128057 None:intergenic
GCCATTGCAGTTGCACCAAC+AGG 0.427583 4.1:+19127299 None:intergenic
ACAGTTAAGTGCCTTAGAAA+TGG 0.427630 4.1:-19128450 MS.gene36419:intron
GTAAGGATTAAAGGATTGTT+GGG 0.431662 4.1:+19127199 None:intergenic
TTGCTCCAGGCTGTCCAGTT+AGG 0.435647 4.1:-19127612 MS.gene36419:CDS
GTGATTTGGGTTTGTCATTG+AGG 0.445503 4.1:-19128020 MS.gene36419:CDS
TGAAAGCTATTATTAGTGTA+AGG 0.448252 4.1:+19127182 None:intergenic
TACCACTGGATATTCATGAT+AGG 0.448415 4.1:-19126911 MS.gene36419:CDS
TGAATATCCAGTGGTACTCT+AGG 0.457880 4.1:+19126918 None:intergenic
CGATAGTAGGCACGTGGACA+TGG 0.470350 4.1:+19127643 None:intergenic
ATCTTCTATTTCACCAGCTG+TGG 0.470676 4.1:+19128929 None:intergenic
TGATGGTCCTTCACCACTTG+TGG 0.487925 4.1:+19128137 None:intergenic
ACCCTAGCCTTTCTATTAGG+AGG 0.495222 4.1:+19127850 None:intergenic
AGACGACACGAAAATAAAAC+AGG 0.495687 4.1:-19128874 MS.gene36419:intron
CCCTCCTAATAGAAAGGCTA+GGG 0.503705 4.1:-19127851 MS.gene36419:CDS
AGAAAATAATAATAAAAGAA+AGG 0.505035 4.1:-19128327 MS.gene36419:intron
TGTTTCCTAACTGGACAGCC+TGG 0.509897 4.1:+19127607 None:intergenic
ATACTAATTACAACATATGA+AGG 0.514191 4.1:-19127341 MS.gene36419:CDS
TGCTAGTACTACTCTGCTGT+TGG 0.516325 4.1:+19126973 None:intergenic
ACCACTGGATATTCATGATA+GGG 0.516884 4.1:-19126910 MS.gene36419:CDS
TATGGACAGAAAATAGCAAA+AGG 0.518587 4.1:-19127670 MS.gene36419:CDS
TGTGAAAGAGAATGATGAGA+AGG 0.524014 4.1:-19128967 MS.gene36419:CDS
CCCTAGCCTTTCTATTAGGA+GGG 0.524327 4.1:+19127851 None:intergenic
GATACTGAGGGAAATAAAGA+AGG 0.534250 4.1:-19127970 MS.gene36419:CDS
GCAGTTGCACCAACAGGTAG+TGG 0.543336 4.1:+19127305 None:intergenic
TTATTCCCCTCCTAATAGAA+AGG 0.546213 4.1:-19127857 MS.gene36419:CDS
GCAACAGCAAGCCTAAACTT+AGG 0.549893 4.1:+19126831 None:intergenic
TCATAACCCTAGAGTACCAC+TGG 0.551641 4.1:-19126925 MS.gene36419:CDS
GACAATAATGCAGCCACAAG+TGG 0.553171 4.1:-19128150 MS.gene36419:CDS
AGATGAATGATGGATGTCAA+TGG 0.556326 4.1:-19127699 MS.gene36419:CDS
AGCAACAGTACAACGATAGT+AGG 0.557840 4.1:+19127630 None:intergenic
AGTGCAGAATAAAATGCAAA+GGG 0.560508 4.1:-19127917 MS.gene36419:CDS
CCCCTCCTAATAGAAAGGCT+AGG 0.560534 4.1:-19127852 MS.gene36419:CDS
TATCGTTGTACTGTTGCTCC+AGG 0.560802 4.1:-19127625 MS.gene36419:CDS
ACCTGTTGGTGCAACTGCAA+TGG 0.566391 4.1:-19127300 MS.gene36419:CDS
AATGCAGCCACAAGTGGTGA+AGG 0.567792 4.1:-19128144 MS.gene36419:CDS
TCATCAGTAATATTGTTTGG+TGG 0.568590 4.1:+19128060 None:intergenic
CCTAGCCTTTCTATTAGGAG+GGG 0.569534 4.1:+19127852 None:intergenic
GTTCATTATTATTATTGGTG+AGG 0.569658 4.1:+19127087 None:intergenic
GAATATCCAGTGGTACTCTA+GGG 0.576532 4.1:+19126919 None:intergenic
GAAGTACATGAAGCCACAGC+TGG 0.577747 4.1:-19128942 MS.gene36419:CDS
AAACAAAGCATTGAGGAAAG+TGG 0.581597 4.1:-19128405 MS.gene36419:CDS
CAGTGCAGAATAAAATGCAA+AGG 0.585438 4.1:-19127918 MS.gene36419:CDS
TAAAATGCAAAGGGTACATG+AGG 0.591092 4.1:-19127908 MS.gene36419:CDS
CATAACCATCCACTACCTGT+TGG 0.598750 4.1:-19127314 MS.gene36419:CDS
AAGTGCCTTAGAAATGGAGA+TGG 0.601274 4.1:-19128444 MS.gene36419:CDS
GGAGCTGGAGCTACCTGCAG+TGG 0.606765 4.1:+19127043 None:intergenic
ATTCATGATAGGGTTTGGAA+AGG 0.609091 4.1:-19126900 MS.gene36419:CDS
GGCTTCAACAGCTTCAGCAG+CGG 0.619613 4.1:-19127279 MS.gene36419:CDS
AAGAAGAAAACAAAGCATTG+AGG 0.626884 4.1:-19128412 MS.gene36419:CDS
AGCAACAACACTACTACACA+TGG 0.627625 4.1:-19126777 MS.gene36419:CDS
CAAAGCATTGAGGAAAGTGG+TGG 0.629030 4.1:-19128402 MS.gene36419:CDS
TTGCACCAACAGGTAGTGGA+TGG 0.629935 4.1:+19127309 None:intergenic
TTGAAGATTGGTTTAATGGG+TGG 0.629949 4.1:+19127159 None:intergenic
AACCCCAATGATCCATCCCA+AGG 0.633360 4.1:-19127122 MS.gene36419:CDS
GCATGAGTAGTAGTAACACT+AGG 0.638304 4.1:+19127883 None:intergenic
CACGTGTCAGAGAGATACTG+AGG 0.656234 4.1:-19127983 MS.gene36419:CDS
TTCCTTGGGATGGATCATTG+GGG 0.675100 4.1:+19127120 None:intergenic
ACCCTATCATGAATATCCAG+TGG 0.685743 4.1:+19126909 None:intergenic
GTACAACGATAGTAGGCACG+TGG 0.706885 4.1:+19127637 None:intergenic
ACGTGTCAGAGAGATACTGA+GGG 0.717249 4.1:-19127982 MS.gene36419:CDS
CCTGCAGTGGAAAATCGTCG+CGG 0.769202 4.1:+19127056 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTAATTCTTAAGAT+CGG + chr4.1:19128395-19128414 None:intergenic 10.0%
!! AGAAAATAATAATAAAAGAA+AGG - chr4.1:19127478-19127497 MS.gene36419:intron 10.0%
!! ATTATTATATTAAACACAAT+AGG + chr4.1:19127583-19127602 None:intergenic 10.0%
!! TTATTATATTAAACACAATA+GGG + chr4.1:19127582-19127601 None:intergenic 10.0%
!!! CAACTATTATTAATTTTATT+TGG - chr4.1:19128241-19128260 MS.gene36419:intron 10.0%
!!! TTCTTTTATTATTATTTTCT+TGG + chr4.1:19127478-19127497 None:intergenic 10.0%
!! TAACTCTTGAAAATTAAAAT+AGG - chr4.1:19127282-19127301 MS.gene36419:CDS 15.0%
!! AATCCTAATATTTCAGATTA+TGG - chr4.1:19128575-19128594 MS.gene36419:intron 20.0%
!! ATAAGCAACAATATCAATAT+TGG + chr4.1:19127010-19127029 None:intergenic 20.0%
!! ATACTAATTACAACATATGA+AGG - chr4.1:19128464-19128483 MS.gene36419:intron 20.0%
!! ATACTATTGAAGAGAAAAAA+TGG + chr4.1:19127094-19127113 None:intergenic 20.0%
!! ATTATTAGTGTAAGGATTAA+AGG + chr4.1:19128618-19128637 None:intergenic 20.0%
!! GAAAATTAAAATAGGTATCT+AGG - chr4.1:19127290-19127309 MS.gene36419:CDS 20.0%
!! GTTGAGTTCATTATTATTAT+TGG + chr4.1:19128726-19128745 None:intergenic 20.0%
!! TGAAAAATTTGTCTCATTAA+AGG + chr4.1:19127056-19127075 None:intergenic 20.0%
!!! AAACCATAATCTGAAATATT+AGG + chr4.1:19128581-19128600 None:intergenic 20.0%
!!! ATATTTGAAGATTGGTTTAA+TGG + chr4.1:19128653-19128672 None:intergenic 20.0%
!!! TAGATGAAGAGTATAATTAA+GGG + chr4.1:19127136-19127155 None:intergenic 20.0%
!!! TATTTGAAGATTGGTTTAAT+GGG + chr4.1:19128652-19128671 None:intergenic 20.0%
!!! TTAGATGAAGAGTATAATTA+AGG + chr4.1:19127137-19127156 None:intergenic 20.0%
! ATATATACTTGTTTCCTAAC+TGG + chr4.1:19128210-19128229 None:intergenic 25.0%
! CTTCAATAGTATCTATGTTT+GGG - chr4.1:19127102-19127121 MS.gene36419:CDS 25.0%
! GATGAAACTAATTATTCTCA+TGG - chr4.1:19128074-19128093 MS.gene36419:CDS 25.0%
! GTTCATTATTATTATTGGTG+AGG + chr4.1:19128721-19128740 None:intergenic 25.0%
! TCATCATCAGTAATATTGTT+TGG + chr4.1:19127751-19127770 None:intergenic 25.0%
! TCTTCAATAGTATCTATGTT+TGG - chr4.1:19127101-19127120 MS.gene36419:CDS 25.0%
! TGAAAGCTATTATTAGTGTA+AGG + chr4.1:19128626-19128645 None:intergenic 25.0%
! TGCTTCTAATATTTGAAGAT+TGG + chr4.1:19128661-19128680 None:intergenic 25.0%
! TTAAATCTACTTGTCTTCAA+TGG + chr4.1:19126976-19126995 None:intergenic 25.0%
!! AGATGAAGAGTATAATTAAG+GGG + chr4.1:19127135-19127154 None:intergenic 25.0%
!!! AATTTTATTTGGATCTTCTG+CGG - chr4.1:19128252-19128271 MS.gene36419:intron 25.0%
!!! GTTTTTTGAAAGATGAATGA+TGG - chr4.1:19128096-19128115 MS.gene36419:CDS 25.0%
AAAGAACTTTAAACTCACTG+TGG + chr4.1:19128007-19128026 None:intergenic 30.0%
AGAAGGCAAAAAAGAACAAT+TGG - chr4.1:19127852-19127871 MS.gene36419:CDS 30.0%
AGTATAAGTGAGAGTGATTT+GGG - chr4.1:19127772-19127791 MS.gene36419:intron 30.0%
AGTGCAGAATAAAATGCAAA+GGG - chr4.1:19127888-19127907 MS.gene36419:CDS 30.0%
ATCTCATGAAATGATCTTGA+TGG + chr4.1:19127688-19127707 None:intergenic 30.0%
GAAGGCAAAAAAGAACAATT+GGG - chr4.1:19127853-19127872 MS.gene36419:CDS 30.0%
GTAAGGATTAAAGGATTGTT+GGG + chr4.1:19128609-19128628 None:intergenic 30.0%
TAGTATAAGTGAGAGTGATT+TGG - chr4.1:19127771-19127790 MS.gene36419:intron 30.0%
TATGGACAGAAAATAGCAAA+AGG - chr4.1:19128135-19128154 MS.gene36419:CDS 30.0%
TCATCAGTAATATTGTTTGG+TGG + chr4.1:19127748-19127767 None:intergenic 30.0%
TGTAAGGATTAAAGGATTGT+TGG + chr4.1:19128610-19128629 None:intergenic 30.0%
! AGGTTGATCAGTTGAATTAT+TGG + chr4.1:19128786-19128805 None:intergenic 30.0%
! GTAATATTGTTTGGTGGTAA+TGG + chr4.1:19127742-19127761 None:intergenic 30.0%
!! AAGAAGAAAACAAAGCATTG+AGG - chr4.1:19127393-19127412 MS.gene36419:intron 30.0%
ACAGTTAAGTGCCTTAGAAA+TGG - chr4.1:19127355-19127374 MS.gene36419:CDS 35.0%
ACCACTGGATATTCATGATA+GGG - chr4.1:19128895-19128914 MS.gene36419:CDS 35.0%
ACTACTTTGCAACCAATACA+AGG + chr4.1:19128291-19128310 None:intergenic 35.0%
ACTTTCCATCTCCATTTCTA+AGG + chr4.1:19127369-19127388 None:intergenic 35.0%
AGACGACACGAAAATAAAAC+AGG - chr4.1:19126931-19126950 MS.gene36419:CDS 35.0%
ATCAGTTGAATTATTGGAGC+TGG + chr4.1:19128780-19128799 None:intergenic 35.0%
ATTCATGATAGGGTTTGGAA+AGG - chr4.1:19128905-19128924 MS.gene36419:CDS 35.0%
CAGTGCAGAATAAAATGCAA+AGG - chr4.1:19127887-19127906 MS.gene36419:CDS 35.0%
GAGGTCAAAAACAATTCCTT+GGG + chr4.1:19128702-19128721 None:intergenic 35.0%
GATACTGAGGGAAATAAAGA+AGG - chr4.1:19127835-19127854 MS.gene36419:CDS 35.0%
GGATGTCAATGGAGAAAATA+TGG - chr4.1:19128117-19128136 MS.gene36419:CDS 35.0%
TACCACTGGATATTCATGAT+AGG - chr4.1:19128894-19128913 MS.gene36419:CDS 35.0%
TCAAAAACAATTCCTTGGGA+TGG + chr4.1:19128698-19128717 None:intergenic 35.0%
TGAGGTCAAAAACAATTCCT+TGG + chr4.1:19128703-19128722 None:intergenic 35.0%
TGGATATTCATGATAGGGTT+TGG - chr4.1:19128900-19128919 MS.gene36419:CDS 35.0%
TGTGAAAGAGAATGATGAGA+AGG - chr4.1:19126838-19126857 MS.gene36419:CDS 35.0%
TTATTCCCCTCCTAATAGAA+AGG - chr4.1:19127948-19127967 MS.gene36419:CDS 35.0%
TTGCATCAGATCCTAAGTTT+AGG - chr4.1:19128963-19128982 MS.gene36419:CDS 35.0%
! TAAAATGCAAAGGGTACATG+AGG - chr4.1:19127897-19127916 MS.gene36419:CDS 35.0%
! TTTTGCATCCAAGAAAAACG+AGG + chr4.1:19128806-19128825 None:intergenic 35.0%
!! AAACAAAGCATTGAGGAAAG+TGG - chr4.1:19127400-19127419 MS.gene36419:intron 35.0%
!! AGATGAATGATGGATGTCAA+TGG - chr4.1:19128106-19128125 MS.gene36419:CDS 35.0%
!! TGTATTGGTTGCAAAGTAGT+TGG - chr4.1:19128291-19128310 MS.gene36419:intron 35.0%
!! TTGAAGATTGGTTTAATGGG+TGG + chr4.1:19128649-19128668 None:intergenic 35.0%
AAGTGCCTTAGAAATGGAGA+TGG - chr4.1:19127361-19127380 MS.gene36419:CDS 40.0%
AATTCCTTGGGATGGATCAT+TGG + chr4.1:19128690-19128709 None:intergenic 40.0%
ACCCTATCATGAATATCCAG+TGG + chr4.1:19128899-19128918 None:intergenic 40.0%
AGCAACAACACTACTACACA+TGG - chr4.1:19129028-19129047 MS.gene36419:CDS 40.0%
AGCAACAGTACAACGATAGT+AGG + chr4.1:19128178-19128197 None:intergenic 40.0%
AGCGGCTTCATTTATGTTAC+TGG - chr4.1:19128544-19128563 MS.gene36419:intron 40.0%
ATCTTCTATTTCACCAGCTG+TGG + chr4.1:19126879-19126898 None:intergenic 40.0%
ATTCCTTGGGATGGATCATT+GGG + chr4.1:19128689-19128708 None:intergenic 40.0%
GAATATCCAGTGGTACTCTA+GGG + chr4.1:19128889-19128908 None:intergenic 40.0%
GACTGCATAGTTGTTAGGTT+AGG + chr4.1:19128338-19128357 None:intergenic 40.0%
GCATGAGTAGTAGTAACACT+AGG + chr4.1:19127925-19127944 None:intergenic 40.0%
TGAATATCCAGTGGTACTCT+AGG + chr4.1:19128890-19128909 None:intergenic 40.0%
TGAGTGACTGCATAGTTGTT+AGG + chr4.1:19128343-19128362 None:intergenic 40.0%
TTTATTTGGATCTTCTGCGG+TGG - chr4.1:19128255-19128274 MS.gene36419:intron 40.0%
! GAAACCCTAGCCTTTCTATT+AGG + chr4.1:19127961-19127980 None:intergenic 40.0%
! GTGATTTGGGTTTGTCATTG+AGG - chr4.1:19127785-19127804 MS.gene36419:intron 40.0%
!! CTGATCAACCTCGTTTTTCT+TGG - chr4.1:19128795-19128814 MS.gene36419:intron 40.0%
ACGTGTCAGAGAGATACTGA+GGG - chr4.1:19127823-19127842 MS.gene36419:CDS 45.0%
CATAACCATCCACTACCTGT+TGG - chr4.1:19128491-19128510 MS.gene36419:intron 45.0%
CCCTCCTAATAGAAAGGCTA+GGG - chr4.1:19127954-19127973 MS.gene36419:CDS 45.0%
GACAATAATGCAGCCACAAG+TGG - chr4.1:19127655-19127674 MS.gene36419:CDS 45.0%
GCAACAGCAAGCCTAAACTT+AGG + chr4.1:19128977-19128996 None:intergenic 45.0%
GGTTGCAAAGTAGTTGGATC+AGG - chr4.1:19128297-19128316 MS.gene36419:intron 45.0%
TATCGTTGTACTGTTGCTCC+AGG - chr4.1:19128180-19128199 MS.gene36419:CDS 45.0%
TGATAGAGATCTCACTCAGC+AGG - chr4.1:19127606-19127625 MS.gene36419:CDS 45.0%
TGCTAGTACTACTCTGCTGT+TGG + chr4.1:19128835-19128854 None:intergenic 45.0%
TTCCTTGGGATGGATCATTG+GGG + chr4.1:19128688-19128707 None:intergenic 45.0%
! ACCCTAGCCTTTCTATTAGG+AGG + chr4.1:19127958-19127977 None:intergenic 45.0%
! CCCTAGCCTTTCTATTAGGA+GGG + chr4.1:19127957-19127976 None:intergenic 45.0%
! CCTAGCCTTTCTATTAGGAG+GGG + chr4.1:19127956-19127975 None:intergenic 45.0%
! TCATAACCCTAGAGTACCAC+TGG - chr4.1:19128880-19128899 MS.gene36419:CDS 45.0%
!! CAAAGCATTGAGGAAAGTGG+TGG - chr4.1:19127403-19127422 MS.gene36419:intron 45.0%
!!! TTTTAATTTTTGTTTAATAT+AGG - chr4.1:19128415-19128434 MS.gene36419:CDS 5.0%
AACCCCAATGATCCATCCCA+AGG - chr4.1:19128683-19128702 MS.gene36419:intron 50.0%
AATGCAGCCACAAGTGGTGA+AGG - chr4.1:19127661-19127680 MS.gene36419:CDS 50.0%
ACCTGTTGGTGCAACTGCAA+TGG - chr4.1:19128505-19128524 MS.gene36419:intron 50.0%
CACGTGTCAGAGAGATACTG+AGG - chr4.1:19127822-19127841 MS.gene36419:CDS 50.0%
CCCCTCCTAATAGAAAGGCT+AGG - chr4.1:19127953-19127972 MS.gene36419:CDS 50.0%
GAAGTACATGAAGCCACAGC+TGG - chr4.1:19126863-19126882 MS.gene36419:CDS 50.0%
GTACAACGATAGTAGGCACG+TGG + chr4.1:19128171-19128190 None:intergenic 50.0%
TGATGGTCCTTCACCACTTG+TGG + chr4.1:19127671-19127690 None:intergenic 50.0%
TGTTTCCTAACTGGACAGCC+TGG + chr4.1:19128201-19128220 None:intergenic 50.0%
!! TTGCACCAACAGGTAGTGGA+TGG + chr4.1:19128499-19128518 None:intergenic 50.0%
CCTGCAGTGGAAAATCGTCG+CGG + chr4.1:19128752-19128771 None:intergenic 55.0%
CGATAGTAGGCACGTGGACA+TGG + chr4.1:19128165-19128184 None:intergenic 55.0%
GCAGTTGCACCAACAGGTAG+TGG + chr4.1:19128503-19128522 None:intergenic 55.0%
GCCATTGCAGTTGCACCAAC+AGG + chr4.1:19128509-19128528 None:intergenic 55.0%
GGCTTCAACAGCTTCAGCAG+CGG - chr4.1:19128526-19128545 MS.gene36419:intron 55.0%
TTGCTCCAGGCTGTCCAGTT+AGG - chr4.1:19128193-19128212 MS.gene36419:intron 55.0%
TTGGATCTTCTGCGGTGGCG+CGG - chr4.1:19128260-19128279 MS.gene36419:intron 60.0%
! CCGCGACGATTTTCCACTGC+AGG - chr4.1:19128749-19128768 MS.gene36419:intron 60.0%
GGAGCTGGAGCTACCTGCAG+TGG + chr4.1:19128765-19128784 None:intergenic 65.0%
GGCGCGGCTGCACCTTGTAT+TGG - chr4.1:19128276-19128295 MS.gene36419:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 19126764 19129063 19126764 ID=MS.gene36419
chr4.1 mRNA 19126764 19129063 19126764 ID=MS.gene36419.t1;Parent=MS.gene36419
chr4.1 exon 19128875 19129063 19128875 ID=MS.gene36419.t1.exon1;Parent=MS.gene36419.t1
chr4.1 CDS 19128875 19129063 19128875 ID=cds.MS.gene36419.t1;Parent=MS.gene36419.t1
chr4.1 exon 19128328 19128468 19128328 ID=MS.gene36419.t1.exon2;Parent=MS.gene36419.t1
chr4.1 CDS 19128328 19128468 19128328 ID=cds.MS.gene36419.t1;Parent=MS.gene36419.t1
chr4.1 exon 19127819 19128199 19127819 ID=MS.gene36419.t1.exon3;Parent=MS.gene36419.t1
chr4.1 CDS 19127819 19128199 19127819 ID=cds.MS.gene36419.t1;Parent=MS.gene36419.t1
chr4.1 exon 19127606 19127719 19127606 ID=MS.gene36419.t1.exon4;Parent=MS.gene36419.t1
chr4.1 CDS 19127606 19127719 19127606 ID=cds.MS.gene36419.t1;Parent=MS.gene36419.t1
chr4.1 exon 19126764 19127390 19126764 ID=MS.gene36419.t1.exon5;Parent=MS.gene36419.t1
chr4.1 CDS 19126764 19127390 19126764 ID=cds.MS.gene36419.t1;Parent=MS.gene36419.t1
Gene Sequence

>MS.gene36419

ATGGAAATTGATCTCTCTTTGAAGATAGATAGTGATGATGAGCGAAAAGAAGAAGAAGAAGTAGATCATGAGCTTGTGAAAGAGAATGATGAGAAGGAAGAAGTACATGAAGCCACAGCTGGTGAAATAGAAGATGATGATGCTTCAGTTATACAACTATCTTTGCAAGACGACACGAAAATAAAACAGGTATCTATATATATAATTTTCCATTGAAGACAAGTAGATTTAAAAGCATAATTACCAATATTGATATTGTTGCTTATCAATTCTAAAAAAAATGAGTATTCCTTTAATGAGACAAATTTTTCACATCTCTACTTCTCACCATTTTTTCTCTTCAATAGTATCTATGTTTGGGTAGAGTACCCCTTAATTATACTCTTCATCTAATATTAATATTATTTTTCTTTGTTTGTTCTAAGAAAACATTATTTGTATTATTTTCTTCAATAATCTTCTTGATCATATTTTCTATAGTGTATTATACTTGCTTATGTATATATGCATGTAATGTATAACTCTTGAAAATTAAAATAGGTATCTAGGTAGTTTTAATTGTCTGTGAAAAATGATATATATGTATACTCTACAGTTAAGTGCCTTAGAAATGGAGATGGAAAGTATGAAAGAAGAAAACAAAGCATTGAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTGCAAACAAAATTTTCAGTCATCCAAGAAAATAATAATAAAAGAAAGGTAAATTAAATCTGAATGTTAATTAATTTTCTATATATATATATATATATATAGTCTTTATTGACTATCTATATATCATCCCTATTGTGTTTAATATAATAATAATTGATAGAGATCTCACTCAGCAGGATCGTCAACTTTCTCTCTCACTACAAGACAATAATGCAGCCACAAGTGGTGAAGGACCATCAAGATCATTTCATGAGATCTTTAGTCAAAAAATTAAAAGATCTTCATCTCCATTACCACCAAACAATATTACTGATGATGATAGTATAAGTGAGAGTGATTTGGGTTTGTCATTGAGGATGCAGACAATAAACACGTGTCAGAGAGATACTGAGGGAAATAAAGAAGGCAAAAAAGAACAATTGGGAAGTTTTGAATCAGTGCAGAATAAAATGCAAAGGGTACATGAGGTGCCTAGTGTTACTACTACTCATGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAGTGAGTTTAAAGTTCTTTTTTCAGATTTTTTTACTATATGATTTGATTAAGATTTTTTTATTTAAGATGAAACTAATTATTCTCATGGTTTTTTGAAAGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCACGTGCCTACTATCGTTGTACTGTTGCTCCAGGCTGTCCAGTTAGGAAACAAGTATATATTTATTCATTCTCAACTATTATTAATTTTATTTGGATCTTCTGCGGTGGCGCGGCTGCACCTTGTATTGGTTGCAAAGTAGTTGGATCAGGATGCAAATCTTGCATCCTAACCTAACAACTATGCAGTCACTCAGCAGAAGATCTGATTTCTTTATCAATTAACCGATCTTAAGAATTAATATATTTTTTAATTTTTGTTTAATATAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCAATGGCTTCAACAGCTTCAGCAGCGGCTTCATTTATGTTACTGGATTCAAGCAATCCTAATATTTCAGATTATGGTTTCACAACCCAACAATCCTTTAATCCTTACACTAATAATAGCTTTCACCACCCATTAAACCAATCTTCAAATATTAGAAGCATAAACCCCAATGATCCATCCCAAGGAATTGTTTTTGACCTCACCAATAATAATAATGAACTCAACGAACCGCGACGATTTTCCACTGCAGGTAGCTCCAGCTCCAATAATTCAACTGATCAACCTCGTTTTTCTTGGATGCAAAACAAATACCAACAGCAGAGTAGTACTAGCAATGCTAATATTGCAATGAACAATTTTCATAACCCTAGAGTACCACTGGATATTCATGATAGGGTTTGGAAAGGATCAGAAGAAAATAATAACAACAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACACTACTACACATGGTAGCAACAATTGA

Protein sequence

>MS.gene36419.t1

MEIDLSLKIDSDDERKEEEEVDHELVKENDEKEEVHEATAGEIEDDDASVIQLSLQDDTKIKQLSALEMEMESMKEENKALRKVVEQTMKDYYDLQTKFSVIQENNNKRKDRQLSLSLQDNNAATSGEGPSRSFHEIFSQKIKRSSSPLPPNNITDDDSISESDLGLSLRMQTINTCQRDTEGNKEGKKEQLGSFESVQNKMQRVHEVPSVTTTHAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPNISDYGFTTQQSFNPYTNNSFHHPLNQSSNIRSINPNDPSQGIVFDLTNNNNELNEPRRFSTAGSSSSNNSTDQPRFSWMQNKYQQQSSTSNANIAMNNFHNPRVPLDIHDRVWKGSEENNNNNVSAIASDPKFRLAVAAAISSLMNKESNNTTTHGSNN