Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07530.t1 | XP_013468900.1 | 93.8 | 486 | 29 | 1 | 1 | 486 | 22 | 506 | 1.50E-247 | 865.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07530.t1 | Q5RB63 | 38.9 | 288 | 163 | 7 | 200 | 479 | 90 | 372 | 2.2e-42 | 174.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07530.t1 | A0A072VMA5 | 93.8 | 486 | 29 | 1 | 1 | 486 | 22 | 506 | 1.1e-247 | 865.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene07530 | 0.845269 | 4.51E-59 | -1.69E-46 |
MS.gene049159 | MS.gene07530 | 0.872148 | 3.97E-67 | -1.69E-46 |
MS.gene049190 | MS.gene07530 | 0.804042 | 2.61E-49 | -1.69E-46 |
MS.gene049254 | MS.gene07530 | 0.800303 | 1.54E-48 | -1.69E-46 |
MS.gene049341 | MS.gene07530 | 0.820772 | 5.75E-53 | -1.69E-46 |
MS.gene049382 | MS.gene07530 | 0.810208 | 1.29E-50 | -1.69E-46 |
MS.gene049404 | MS.gene07530 | 0.840408 | 8.85E-58 | -1.69E-46 |
MS.gene049435 | MS.gene07530 | 0.821824 | 3.29E-53 | -1.69E-46 |
MS.gene049501 | MS.gene07530 | 0.857719 | 1.35E-62 | -1.69E-46 |
MS.gene049850 | MS.gene07530 | 0.853379 | 2.48E-61 | -1.69E-46 |
MS.gene049979 | MS.gene07530 | 0.804687 | 1.92E-49 | -1.69E-46 |
MS.gene050020 | MS.gene07530 | 0.826315 | 2.90E-54 | -1.69E-46 |
MS.gene050442 | MS.gene07530 | 0.826889 | 2.12E-54 | -1.69E-46 |
MS.gene050551 | MS.gene07530 | 0.806361 | 8.54E-50 | -1.69E-46 |
MS.gene050689 | MS.gene07530 | 0.8267 | 2.35E-54 | -1.69E-46 |
MS.gene050719 | MS.gene07530 | 0.811243 | 7.72E-51 | -1.69E-46 |
MS.gene050721 | MS.gene07530 | 0.807823 | 4.19E-50 | -1.69E-46 |
MS.gene050724 | MS.gene07530 | 0.809455 | 1.88E-50 | -1.69E-46 |
MS.gene050759 | MS.gene07530 | 0.804612 | 1.99E-49 | -1.69E-46 |
MS.gene050807 | MS.gene07530 | 0.84234 | 2.75E-58 | -1.69E-46 |
MS.gene050808 | MS.gene07530 | 0.806911 | 6.54E-50 | -1.69E-46 |
MS.gene050815 | MS.gene07530 | 0.817294 | 3.55E-52 | -1.69E-46 |
MS.gene050844 | MS.gene07530 | 0.80394 | 2.74E-49 | -1.69E-46 |
MS.gene050959 | MS.gene07530 | 0.805556 | 1.26E-49 | -1.69E-46 |
MS.gene051102 | MS.gene07530 | 0.816116 | 6.53E-52 | -1.69E-46 |
MS.gene051180 | MS.gene07530 | 0.827337 | 1.65E-54 | -1.69E-46 |
MS.gene051198 | MS.gene07530 | 0.828912 | 6.91E-55 | -1.69E-46 |
MS.gene051243 | MS.gene07530 | 0.803989 | 2.68E-49 | -1.69E-46 |
MS.gene051247 | MS.gene07530 | 0.836801 | 7.56E-57 | -1.69E-46 |
MS.gene051328 | MS.gene07530 | 0.810268 | 1.25E-50 | -1.69E-46 |
MS.gene05157 | MS.gene07530 | 0.833213 | 6.07E-56 | -1.69E-46 |
MS.gene051719 | MS.gene07530 | 0.834826 | 2.39E-56 | -1.69E-46 |
MS.gene051720 | MS.gene07530 | 0.830016 | 3.72E-55 | -1.69E-46 |
MS.gene051744 | MS.gene07530 | 0.828014 | 1.14E-54 | -1.69E-46 |
MS.gene051800 | MS.gene07530 | 0.80329 | 3.74E-49 | -1.69E-46 |
MS.gene051957 | MS.gene07530 | 0.8015 | 8.75E-49 | -1.69E-46 |
MS.gene052012 | MS.gene07530 | 0.825423 | 4.73E-54 | -1.69E-46 |
MS.gene052020 | MS.gene07530 | 0.871045 | 9.21E-67 | -1.69E-46 |
MS.gene05215 | MS.gene07530 | 0.826713 | 2.33E-54 | -1.69E-46 |
MS.gene052323 | MS.gene07530 | 0.839037 | 2.01E-57 | -1.69E-46 |
MS.gene052397 | MS.gene07530 | 0.811479 | 6.86E-51 | -1.69E-46 |
MS.gene052516 | MS.gene07530 | 0.858122 | 1.02E-62 | -1.69E-46 |
MS.gene052519 | MS.gene07530 | 0.806028 | 1.00E-49 | -1.69E-46 |
MS.gene052582 | MS.gene07530 | 0.814074 | 1.85E-51 | -1.69E-46 |
MS.gene052611 | MS.gene07530 | 0.850855 | 1.30E-60 | -1.69E-46 |
MS.gene052612 | MS.gene07530 | 0.820418 | 6.93E-53 | -1.69E-46 |
MS.gene052613 | MS.gene07530 | 0.800445 | 1.44E-48 | -1.69E-46 |
MS.gene052665 | MS.gene07530 | 0.853152 | 2.89E-61 | -1.69E-46 |
MS.gene052773 | MS.gene07530 | 0.816701 | 4.83E-52 | -1.69E-46 |
MS.gene052863 | MS.gene07530 | 0.865014 | 8.03E-65 | -1.69E-46 |
MS.gene052896 | MS.gene07530 | 0.872416 | 3.24E-67 | -1.69E-46 |
MS.gene053008 | MS.gene07530 | 0.849302 | 3.53E-60 | -1.69E-46 |
MS.gene053079 | MS.gene07530 | 0.822564 | 2.21E-53 | -1.69E-46 |
MS.gene053144 | MS.gene07530 | 0.808588 | 2.88E-50 | -1.69E-46 |
MS.gene053166 | MS.gene07530 | 0.817473 | 3.24E-52 | -1.69E-46 |
MS.gene053221 | MS.gene07530 | 0.809839 | 1.55E-50 | -1.69E-46 |
MS.gene053226 | MS.gene07530 | 0.847674 | 9.96E-60 | -1.69E-46 |
MS.gene053630 | MS.gene07530 | 0.800464 | 1.42E-48 | -1.69E-46 |
MS.gene05364 | MS.gene07530 | 0.809568 | 1.77E-50 | -1.69E-46 |
MS.gene053998 | MS.gene07530 | 0.807386 | 5.18E-50 | -1.69E-46 |
MS.gene05415 | MS.gene07530 | 0.802016 | 6.85E-49 | -1.69E-46 |
MS.gene054236 | MS.gene07530 | 0.807212 | 5.64E-50 | -1.69E-46 |
MS.gene054467 | MS.gene07530 | 0.837507 | 4.99E-57 | -1.69E-46 |
MS.gene054472 | MS.gene07530 | 0.84162 | 4.26E-58 | -1.69E-46 |
MS.gene05447 | MS.gene07530 | 0.81672 | 4.78E-52 | -1.69E-46 |
MS.gene054584 | MS.gene07530 | 0.805634 | 1.21E-49 | -1.69E-46 |
MS.gene05462 | MS.gene07530 | 0.808569 | 2.90E-50 | -1.69E-46 |
MS.gene054651 | MS.gene07530 | 0.843264 | 1.56E-58 | -1.69E-46 |
MS.gene05468 | MS.gene07530 | 0.817652 | 2.95E-52 | -1.69E-46 |
MS.gene054775 | MS.gene07530 | 0.818306 | 2.10E-52 | -1.69E-46 |
MS.gene055227 | MS.gene07530 | 0.826777 | 2.25E-54 | -1.69E-46 |
MS.gene055356 | MS.gene07530 | 0.809628 | 1.72E-50 | -1.69E-46 |
MS.gene055363 | MS.gene07530 | 0.812587 | 3.93E-51 | -1.69E-46 |
MS.gene055465 | MS.gene07530 | 0.840987 | 6.24E-58 | -1.69E-46 |
MS.gene055466 | MS.gene07530 | 0.841941 | 3.50E-58 | -1.69E-46 |
MS.gene055468 | MS.gene07530 | 0.822919 | 1.83E-53 | -1.69E-46 |
MS.gene055469 | MS.gene07530 | 0.810675 | 1.02E-50 | -1.69E-46 |
MS.gene055512 | MS.gene07530 | 0.85179 | 7.06E-61 | -1.69E-46 |
MS.gene055580 | MS.gene07530 | -0.806006 | 1.01E-49 | -1.69E-46 |
MS.gene055623 | MS.gene07530 | 0.812136 | 4.93E-51 | -1.69E-46 |
MS.gene055778 | MS.gene07530 | 0.812034 | 5.19E-51 | -1.69E-46 |
MS.gene055818 | MS.gene07530 | 0.83664 | 8.31E-57 | -1.69E-46 |
MS.gene055890 | MS.gene07530 | 0.812354 | 4.42E-51 | -1.69E-46 |
MS.gene055891 | MS.gene07530 | 0.81243 | 4.26E-51 | -1.69E-46 |
MS.gene055926 | MS.gene07530 | 0.82645 | 2.69E-54 | -1.69E-46 |
MS.gene05604 | MS.gene07530 | 0.829598 | 4.71E-55 | -1.69E-46 |
MS.gene056050 | MS.gene07530 | 0.80461 | 1.99E-49 | -1.69E-46 |
MS.gene056173 | MS.gene07530 | 0.858594 | 7.40E-63 | -1.69E-46 |
MS.gene056308 | MS.gene07530 | 0.808136 | 3.59E-50 | -1.69E-46 |
MS.gene056366 | MS.gene07530 | 0.823958 | 1.05E-53 | -1.69E-46 |
MS.gene056507 | MS.gene07530 | 0.82158 | 3.74E-53 | -1.69E-46 |
MS.gene056553 | MS.gene07530 | 0.833235 | 5.99E-56 | -1.69E-46 |
MS.gene056760 | MS.gene07530 | 0.810236 | 1.27E-50 | -1.69E-46 |
MS.gene057060 | MS.gene07530 | 0.804531 | 2.07E-49 | -1.69E-46 |
MS.gene057140 | MS.gene07530 | 0.808884 | 2.49E-50 | -1.69E-46 |
MS.gene057444 | MS.gene07530 | 0.829593 | 4.72E-55 | -1.69E-46 |
MS.gene057446 | MS.gene07530 | 0.830622 | 2.65E-55 | -1.69E-46 |
MS.gene057693 | MS.gene07530 | 0.822908 | 1.84E-53 | -1.69E-46 |
MS.gene057855 | MS.gene07530 | 0.810254 | 1.26E-50 | -1.69E-46 |
MS.gene057869 | MS.gene07530 | 0.853321 | 2.58E-61 | -1.69E-46 |
MS.gene057915 | MS.gene07530 | 0.854366 | 1.29E-61 | -1.69E-46 |
MS.gene058010 | MS.gene07530 | 0.853012 | 3.17E-61 | -1.69E-46 |
MS.gene05847 | MS.gene07530 | 0.818804 | 1.62E-52 | -1.69E-46 |
MS.gene058625 | MS.gene07530 | 0.856697 | 2.70E-62 | -1.69E-46 |
MS.gene058636 | MS.gene07530 | 0.814846 | 1.25E-51 | -1.69E-46 |
MS.gene058829 | MS.gene07530 | 0.830777 | 2.43E-55 | -1.69E-46 |
MS.gene058979 | MS.gene07530 | 0.836434 | 9.38E-57 | -1.69E-46 |
MS.gene059331 | MS.gene07530 | 0.804113 | 2.52E-49 | -1.69E-46 |
MS.gene059570 | MS.gene07530 | 0.809304 | 2.02E-50 | -1.69E-46 |
MS.gene059725 | MS.gene07530 | 0.814863 | 1.24E-51 | -1.69E-46 |
MS.gene05978 | MS.gene07530 | 0.836232 | 1.06E-56 | -1.69E-46 |
MS.gene059842 | MS.gene07530 | 0.84517 | 4.80E-59 | -1.69E-46 |
MS.gene059937 | MS.gene07530 | 0.826772 | 2.26E-54 | -1.69E-46 |
MS.gene060137 | MS.gene07530 | -0.827784 | 1.29E-54 | -1.69E-46 |
MS.gene060167 | MS.gene07530 | 0.813275 | 2.78E-51 | -1.69E-46 |
MS.gene060312 | MS.gene07530 | 0.81911 | 1.38E-52 | -1.69E-46 |
MS.gene060322 | MS.gene07530 | 0.826166 | 3.15E-54 | -1.69E-46 |
MS.gene06052 | MS.gene07530 | 0.821694 | 3.52E-53 | -1.69E-46 |
MS.gene060587 | MS.gene07530 | 0.845601 | 3.67E-59 | -1.69E-46 |
MS.gene060637 | MS.gene07530 | 0.810069 | 1.38E-50 | -1.69E-46 |
MS.gene060683 | MS.gene07530 | 0.823133 | 1.63E-53 | -1.69E-46 |
MS.gene060685 | MS.gene07530 | 0.824796 | 6.65E-54 | -1.69E-46 |
MS.gene060802 | MS.gene07530 | 0.823614 | 1.26E-53 | -1.69E-46 |
MS.gene060803 | MS.gene07530 | 0.846761 | 1.77E-59 | -1.69E-46 |
MS.gene060918 | MS.gene07530 | 0.806982 | 6.31E-50 | -1.69E-46 |
MS.gene060998 | MS.gene07530 | 0.808277 | 3.35E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 118 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTTCAATTTCTGAATTA+TGG | 0.084752 | 1.2:+62434014 | MS.gene07530:CDS |
TTCAGTTGTTTCTTCCTTTA+TGG | 0.114821 | 1.2:-62436062 | None:intergenic |
TGACAGTTGGTTTGAATTAA+AGG | 0.162229 | 1.2:+62436309 | MS.gene07530:CDS |
CTGGTAGCGCTTTGCCTTAT+GGG | 0.205690 | 1.2:+62435930 | MS.gene07530:CDS |
ATTTCAGAGCATTTCTTAAA+TGG | 0.211617 | 1.2:+62433935 | MS.gene07530:intron |
TCTGGTAGCGCTTTGCCTTA+TGG | 0.229159 | 1.2:+62435929 | MS.gene07530:CDS |
GTCTTCAATTTCTGAATTAT+GGG | 0.244458 | 1.2:+62434015 | MS.gene07530:CDS |
ATAAGTGGGATAAGAGTCTT+AGG | 0.253904 | 1.2:+62434638 | MS.gene07530:CDS |
GGCTCTAGCAATCCAACTTT+TGG | 0.263833 | 1.2:+62437438 | MS.gene07530:CDS |
AACTTCCTCTTCTTTCAAAA+AGG | 0.285902 | 1.2:-62435966 | None:intergenic |
TCATCCTCAGGGTGTTGTTT+TGG | 0.326001 | 1.2:+62439228 | MS.gene07530:CDS |
AAAATGGCAAAAGGAGATTA+AGG | 0.329467 | 1.2:+62434495 | MS.gene07530:CDS |
ACCTGCAGTTGAAGACGAAT+TGG | 0.334870 | 1.2:-62434059 | None:intergenic |
GATGTTGGATGGTACGTTCT+TGG | 0.346116 | 1.2:+62433780 | MS.gene07530:CDS |
ATTGTCTTTGTCAGCTTGCT+TGG | 0.355106 | 1.2:-62437687 | None:intergenic |
TTCGGTGGTGGTGGTGTAGT+AGG | 0.376500 | 1.2:+62434547 | MS.gene07530:CDS |
AATACACATGTTTATGTCAC+TGG | 0.389054 | 1.2:+62436334 | MS.gene07530:CDS |
CAAGTGGAAGCTTCGGAATT+CGG | 0.395495 | 1.2:+62434529 | MS.gene07530:CDS |
CTTTCTGCTGAAATTTAGCC+AGG | 0.400350 | 1.2:-62437507 | None:intergenic |
GGCATATAAGCGGGTTCCTC+AGG | 0.404098 | 1.2:+62434660 | MS.gene07530:CDS |
TGTTTCTGCAACTTCCATAA+AGG | 0.417508 | 1.2:+62436048 | MS.gene07530:CDS |
TCACCATCAGGCGGTGTTGA+AGG | 0.424907 | 1.2:-62434586 | None:intergenic |
GCTAAGCGATTGGAGCAGTT+TGG | 0.425973 | 1.2:+62439862 | MS.gene07530:CDS |
ACTAGAAGAAGATGTTAAAG+AGG | 0.441572 | 1.2:+62438961 | MS.gene07530:CDS |
GTAAATTCTTCTTCACCATC+AGG | 0.442135 | 1.2:-62434598 | None:intergenic |
ATCTTATCACCAGGTCGAAA+AGG | 0.444235 | 1.2:-62437469 | None:intergenic |
GTTAAATTCAAGGACAGAAA+AGG | 0.445666 | 1.2:+62439250 | MS.gene07530:CDS |
TAATTAACCATGCCACAGTC+CGG | 0.453104 | 1.2:+62439824 | MS.gene07530:CDS |
GAAGACGAATTGGGTCTTTG+AGG | 0.461752 | 1.2:-62434049 | None:intergenic |
AAGACGAATTGGGTCTTTGA+GGG | 0.462016 | 1.2:-62434048 | None:intergenic |
TGATAGGAGGAGGCCACGTC+TGG | 0.466721 | 1.2:+62435911 | MS.gene07530:intron |
ACTACCTTGACTGCATCTAT+AGG | 0.470187 | 1.2:-62439001 | None:intergenic |
AATTAAACCATCATCTTCAC+TGG | 0.472143 | 1.2:-62439806 | None:intergenic |
TAGCGAAGGACAACAGTTGT+TGG | 0.472530 | 1.2:-62438558 | None:intergenic |
TGAGGCGCAAGTGGAAGCTT+CGG | 0.475916 | 1.2:+62434522 | MS.gene07530:CDS |
GTCATCTCTTCAACCCCATA+AGG | 0.479721 | 1.2:-62435944 | None:intergenic |
AAAGAGGAATGCACGAAGCT+TGG | 0.484045 | 1.2:+62438977 | MS.gene07530:CDS |
CCCAATTCGTCTTCAACTGC+AGG | 0.485119 | 1.2:+62434058 | MS.gene07530:CDS |
TTTAATTCAAACCAACTGTC+AGG | 0.485198 | 1.2:-62436307 | None:intergenic |
GGTTTATTTATCAGGTTTGG+TGG | 0.486619 | 1.2:+62439769 | MS.gene07530:intron |
CTCTATGTTGATAAAGAGAC+AGG | 0.489825 | 1.2:+62437287 | MS.gene07530:CDS |
GGTATGTGATAATCATCCTC+AGG | 0.490183 | 1.2:+62439216 | MS.gene07530:intron |
AAGGCGCACCATCCAAAAGT+TGG | 0.491090 | 1.2:-62437450 | None:intergenic |
CCTGCAGTTGAAGACGAATT+GGG | 0.493187 | 1.2:-62434058 | None:intergenic |
GATTCCGATGTCTGTCTCCC+TGG | 0.495254 | 1.2:+62437489 | MS.gene07530:CDS |
GCTTCGGAATTCGGTGGTGG+TGG | 0.497213 | 1.2:+62434538 | MS.gene07530:CDS |
CAAGTATGGAATTATAAAAG+AGG | 0.501539 | 1.2:+62436479 | MS.gene07530:CDS |
TGGAAGACAAAATGCTTGGA+TGG | 0.504268 | 1.2:+62437735 | MS.gene07530:CDS |
AATACCAGTGTGGTAGCTGT+TGG | 0.507660 | 1.2:+62436091 | MS.gene07530:CDS |
AATTAACCATGCCACAGTCC+GGG | 0.512168 | 1.2:+62439825 | MS.gene07530:CDS |
CTAATAAACCTCCTGACAGT+TGG | 0.516022 | 1.2:+62436296 | MS.gene07530:CDS |
ATACCAGTGTGGTAGCTGTT+GGG | 0.517744 | 1.2:+62436092 | MS.gene07530:CDS |
TAAGGAGGCTGAGGCGCAAG+TGG | 0.518541 | 1.2:+62434513 | MS.gene07530:CDS |
GAAGAATTTACTGATGATGA+TGG | 0.523794 | 1.2:+62434610 | MS.gene07530:CDS |
CAAGGACAGAAAAGGTGCTC+AGG | 0.526794 | 1.2:+62439258 | MS.gene07530:CDS |
CAGTTTGGTGAGGAACTTGA+AGG | 0.531731 | 1.2:+62439877 | MS.gene07530:CDS |
GGTGAAAATGTCGCAGATGT+TGG | 0.532231 | 1.2:+62433765 | None:intergenic |
ATATCAACCCTCATTTCAGC+AGG | 0.537601 | 1.2:-62438591 | None:intergenic |
TCATCAATAGTAACATCCTC+AGG | 0.539668 | 1.2:-62436361 | None:intergenic |
GTGTGGTAGCTGTTGGGAAG+AGG | 0.542110 | 1.2:+62436098 | MS.gene07530:CDS |
TGTTCAGTCCTGCTGAAATG+AGG | 0.543568 | 1.2:+62438583 | MS.gene07530:CDS |
AGATAAACCAGAAGAAAAGA+AGG | 0.544575 | 1.2:+62436129 | MS.gene07530:CDS |
AGAGGAAGATGCTAAGCGAT+TGG | 0.545342 | 1.2:+62439852 | MS.gene07530:CDS |
GGAAGACAAAATGCTTGGAT+GGG | 0.546076 | 1.2:+62437736 | MS.gene07530:CDS |
CTGGCTAAATTTCAGCAGAA+AGG | 0.546970 | 1.2:+62437508 | MS.gene07530:CDS |
TGTACCTCAGAGAAGACATA+AGG | 0.556409 | 1.2:-62433825 | None:intergenic |
TAGCATCTTCCTCTAGATCC+CGG | 0.556991 | 1.2:-62439843 | None:intergenic |
TGGTAGCGCTTTGCCTTATG+GGG | 0.557580 | 1.2:+62435931 | MS.gene07530:CDS |
GAAGCTTCGGAATTCGGTGG+TGG | 0.562716 | 1.2:+62434535 | MS.gene07530:CDS |
TATGTCTTCTCTGAGGTACA+AGG | 0.569406 | 1.2:+62433828 | MS.gene07530:CDS |
GAGTCTTAGGGCATATAAGC+GGG | 0.570694 | 1.2:+62434651 | MS.gene07530:CDS |
AAGAATTTACTGATGATGAT+GGG | 0.578013 | 1.2:+62434611 | MS.gene07530:CDS |
AAGTTGGAAGACAAAATGCT+TGG | 0.578949 | 1.2:+62437731 | MS.gene07530:CDS |
ATGATGATGGGACATATAAG+TGG | 0.580341 | 1.2:+62434623 | MS.gene07530:CDS |
CTAGATCCCGGACTGTGGCA+TGG | 0.581437 | 1.2:-62439831 | None:intergenic |
TAGAATTGATGAATGGAAGA+TGG | 0.583366 | 1.2:+62439287 | MS.gene07530:CDS |
GCATCAGAATCAGTTACTAT+CGG | 0.583746 | 1.2:-62435992 | None:intergenic |
AAAGGAGATTAAGGAGGCTG+AGG | 0.585827 | 1.2:+62434504 | MS.gene07530:CDS |
TGCATTGGTTACATATCTCA+AGG | 0.589361 | 1.2:+62437325 | MS.gene07530:CDS |
ATACACATGTTTATGTCACT+GGG | 0.589425 | 1.2:+62436335 | MS.gene07530:CDS |
AAGCTGACAAAGACAATAGA+CGG | 0.593819 | 1.2:+62437693 | MS.gene07530:CDS |
GCGTGCATAGAATTGATGAA+TGG | 0.595667 | 1.2:+62439280 | MS.gene07530:CDS |
GAAGACAAAATGCTTGGATG+GGG | 0.605978 | 1.2:+62437737 | MS.gene07530:CDS |
GCGATTGGAGCAGTTTGGTG+AGG | 0.606680 | 1.2:+62439867 | MS.gene07530:CDS |
AGGCAAAGCGCTACCAGACG+TGG | 0.611672 | 1.2:-62435924 | None:intergenic |
GGAGAGAATCAACAACAACT+TGG | 0.615030 | 1.2:+62433801 | MS.gene07530:CDS |
AATTCAGAAATTGAAGACAA+AGG | 0.617573 | 1.2:-62434010 | None:intergenic |
TGGATTGCTAGAGCCACTGA+TGG | 0.618240 | 1.2:-62437430 | None:intergenic |
AGACCTTCAACACCGCCTGA+TGG | 0.618261 | 1.2:+62434583 | MS.gene07530:CDS |
TTATGCTGAGGCTGAAGATG+TGG | 0.619425 | 1.2:+62434462 | MS.gene07530:CDS |
TGGACCTATAGATGCAGTCA+AGG | 0.623091 | 1.2:+62438997 | MS.gene07530:CDS |
TTGTTATGTAGTTTATGCTG+AGG | 0.623808 | 1.2:+62434450 | MS.gene07530:intron |
ATACATGCCAGTGAAGATGA+TGG | 0.624024 | 1.2:+62439799 | MS.gene07530:CDS |
TTCCTCTAGATCCCGGACTG+TGG | 0.624191 | 1.2:-62439836 | None:intergenic |
GACATCGGAATCTTATCACC+AGG | 0.625827 | 1.2:-62437478 | None:intergenic |
TGCCACAGTCCGGGATCTAG+AGG | 0.625882 | 1.2:+62439834 | MS.gene07530:CDS |
ATCAACATAGAGCTTAACAC+GGG | 0.630935 | 1.2:-62437276 | None:intergenic |
AATTCAAACCAACTGTCAGG+AGG | 0.631486 | 1.2:-62436304 | None:intergenic |
TTATGTCACTGGGTTGCCTG+AGG | 0.633023 | 1.2:+62436345 | MS.gene07530:CDS |
GTTCAGTCCTGCTGAAATGA+GGG | 0.634321 | 1.2:+62438584 | MS.gene07530:CDS |
AGAGTCTTAGGGCATATAAG+CGG | 0.635019 | 1.2:+62434650 | MS.gene07530:CDS |
TGGTCCTTATGTCTTCTCTG+AGG | 0.638134 | 1.2:+62433821 | MS.gene07530:CDS |
TGTATATCAGGAACCATCAG+TGG | 0.638535 | 1.2:+62437417 | MS.gene07530:intron |
AAAATGTCGCAGATGTTGGA+TGG | 0.645277 | 1.2:+62433769 | MS.gene07530:CDS |
TAAGTGGGATAAGAGTCTTA+GGG | 0.645357 | 1.2:+62434639 | MS.gene07530:CDS |
TTTCTGCTGAAATTTAGCCA+GGG | 0.652648 | 1.2:-62437506 | None:intergenic |
CTTCCCAACAGCTACCACAC+TGG | 0.656887 | 1.2:-62436095 | None:intergenic |
CAGGACTGAACATATAGCGA+AGG | 0.659719 | 1.2:-62438572 | None:intergenic |
GTATGTGATAATCATCCTCA+GGG | 0.661661 | 1.2:+62439217 | MS.gene07530:CDS |
GGTCTGAAGGAAGAACTGAA+TGG | 0.672653 | 1.2:+62433984 | MS.gene07530:CDS |
GTGGAAGCTTCGGAATTCGG+TGG | 0.675726 | 1.2:+62434532 | MS.gene07530:CDS |
TTAGCCAGGGAGACAGACAT+CGG | 0.680304 | 1.2:-62437493 | None:intergenic |
ATGGCAAAAGGAGATTAAGG+AGG | 0.680476 | 1.2:+62434498 | MS.gene07530:CDS |
AATTCTTCTTCACCATCAGG+CGG | 0.682237 | 1.2:-62434595 | None:intergenic |
TATCAACATAGAGCTTAACA+CGG | 0.691544 | 1.2:-62437277 | None:intergenic |
TGATGATGGGACATATAAGT+GGG | 0.715635 | 1.2:+62434624 | MS.gene07530:CDS |
TTAACCAAAACAACACCCTG+AGG | 0.735800 | 1.2:-62439232 | None:intergenic |
TCAACATAGAGCTTAACACG+GGG | 0.786913 | 1.2:-62437275 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAGTTCATTATA+AGG | + | chr1.2:62437125-62437144 | MS.gene07530:intron | 10.0% |
!! | AAATCTATATTAAATGAAAA+AGG | - | chr1.2:62437846-62437865 | None:intergenic | 10.0% |
!! | AATCTATATTAAATGAAAAA+GGG | - | chr1.2:62437845-62437864 | None:intergenic | 10.0% |
!! | TAAAATTAATACTTTATGTT+TGG | + | chr1.2:62435126-62435145 | MS.gene07530:intron | 10.0% |
!!! | TACTTTTCTTTTTTAAATTA+CGG | - | chr1.2:62435600-62435619 | None:intergenic | 10.0% |
!!! | TTTAAAATTTATTTGCTTTT+GGG | + | chr1.2:62434383-62434402 | MS.gene07530:intron | 10.0% |
!!! | TTTTAAAATTTATTTGCTTT+TGG | + | chr1.2:62434382-62434401 | MS.gene07530:intron | 10.0% |
!! | AAATCCTCATAAAAAATATA+TGG | - | chr1.2:62436777-62436796 | None:intergenic | 15.0% |
!! | ATCTATATTAAATGAAAAAG+GGG | - | chr1.2:62437844-62437863 | None:intergenic | 15.0% |
!! | ATTATATATTTGTGTATATC+AGG | + | chr1.2:62437405-62437424 | MS.gene07530:intron | 15.0% |
!! | GATATACACAAATATATAAT+TGG | - | chr1.2:62437405-62437424 | None:intergenic | 15.0% |
!! | GTATCTGTTATATTTAATTA+AGG | + | chr1.2:62436597-62436616 | MS.gene07530:intron | 15.0% |
!! | TATTATGATTAACATAAGAT+AGG | + | chr1.2:62434748-62434767 | MS.gene07530:intron | 15.0% |
!! | TTTCAATAAAATAAAACCTA+GGG | - | chr1.2:62435806-62435825 | None:intergenic | 15.0% |
!!! | AAATATAACAGATACTTTTA+AGG | - | chr1.2:62436592-62436611 | None:intergenic | 15.0% |
!!! | ATATATTTTTTATGAGGATT+TGG | + | chr1.2:62436776-62436795 | MS.gene07530:intron | 15.0% |
!!! | GTTCATCTTATTTATATAAA+TGG | + | chr1.2:62436167-62436186 | MS.gene07530:intron | 15.0% |
!!! | GTTTTTCTATTTTTTCTTTT+GGG | + | chr1.2:62435866-62435885 | MS.gene07530:intron | 15.0% |
!!! | TCAATTACATTAATCTTTTA+AGG | - | chr1.2:62439039-62439058 | None:intergenic | 15.0% |
!!! | TGATAATATGCAATATATTT+TGG | - | chr1.2:62436689-62436708 | None:intergenic | 15.0% |
!!! | TGTTTTTCTATTTTTTCTTT+TGG | + | chr1.2:62435865-62435884 | MS.gene07530:intron | 15.0% |
!!! | TTACTTTTAACAATTATAGT+AGG | + | chr1.2:62438805-62438824 | MS.gene07530:intron | 15.0% |
!!! | TTTGTTATTATTATTTACTG+TGG | + | chr1.2:62434409-62434428 | MS.gene07530:intron | 15.0% |
!! | AAAAAAAGTTCATTATAAGG+TGG | + | chr1.2:62437128-62437147 | MS.gene07530:intron | 20.0% |
!! | AAAATCAAACTATAATGCTT+AGG | + | chr1.2:62436537-62436556 | MS.gene07530:intron | 20.0% |
!! | AAAATCAACTTGAATAAAGT+TGG | - | chr1.2:62437775-62437794 | None:intergenic | 20.0% |
!! | AAAGATGAGAAAAAATAAGT+GGG | - | chr1.2:62436199-62436218 | None:intergenic | 20.0% |
!! | AAAGGAATATAGGAATAAAA+AGG | - | chr1.2:62436507-62436526 | None:intergenic | 20.0% |
!! | ACAAAAAAAATCCTGAAAAT+AGG | - | chr1.2:62439090-62439109 | None:intergenic | 20.0% |
!! | AGATGCAAAAATTGATATAA+AGG | - | chr1.2:62438110-62438129 | None:intergenic | 20.0% |
!! | AGATTCATATTTCATAAGTT+AGG | + | chr1.2:62438177-62438196 | MS.gene07530:intron | 20.0% |
!! | ATGACAAAAGTTAATATTCT+CGG | - | chr1.2:62439734-62439753 | None:intergenic | 20.0% |
!! | GGTTATAAAATTGATAGAAA+AGG | - | chr1.2:62435700-62435719 | None:intergenic | 20.0% |
!! | GTTTCAATAAAATAAAACCT+AGG | - | chr1.2:62435807-62435826 | None:intergenic | 20.0% |
!! | TAATGAAATTGTTATGTGAT+AGG | + | chr1.2:62435895-62435914 | MS.gene07530:intron | 20.0% |
!! | TATAATGCTTAGGTATATAT+CGG | + | chr1.2:62436547-62436566 | MS.gene07530:intron | 20.0% |
!! | TTAATTAAGGAAAATACAGT+CGG | + | chr1.2:62436610-62436629 | MS.gene07530:intron | 20.0% |
!! | TTAATTTCAACATAAACACA+AGG | - | chr1.2:62433887-62433906 | None:intergenic | 20.0% |
!!! | AAAAGTTAAGCTTTAATTCA+TGG | - | chr1.2:62434337-62434356 | None:intergenic | 20.0% |
!!! | AGTGTTTTTATAATTGTACT+TGG | + | chr1.2:62437564-62437583 | MS.gene07530:intron | 20.0% |
!!! | ATAAAAGTGTATTTTCTGAT+AGG | - | chr1.2:62433964-62433983 | None:intergenic | 20.0% |
!!! | GTTTTATTTTATTGAAACCA+AGG | + | chr1.2:62435809-62435828 | MS.gene07530:intron | 20.0% |
!!! | TATAACCAAATCTAAAATGA+TGG | - | chr1.2:62438688-62438707 | None:intergenic | 20.0% |
!!! | TATCAGAAAATACACTTTTA+TGG | + | chr1.2:62433963-62433982 | MS.gene07530:CDS | 20.0% |
!!! | TATGTTTAGTTTAGAGTTTT+TGG | + | chr1.2:62438414-62438433 | MS.gene07530:intron | 20.0% |
!!! | TATTTTAATAGTACCTAAAC+TGG | - | chr1.2:62439473-62439492 | None:intergenic | 20.0% |
!!! | TTGATTTTACAATTCAACAA+AGG | - | chr1.2:62436525-62436544 | None:intergenic | 20.0% |
!!! | TTTATTCAAGTTGATTTTTC+AGG | + | chr1.2:62437777-62437796 | MS.gene07530:intron | 20.0% |
!!! | TTTTATAACCAAAACTTTGA+TGG | + | chr1.2:62435710-62435729 | MS.gene07530:intron | 20.0% |
! | AAAATCCTGAAAATAGGATA+TGG | - | chr1.2:62439084-62439103 | None:intergenic | 25.0% |
! | AAAGTATATTGCCAAAAGTA+TGG | + | chr1.2:62436639-62436658 | MS.gene07530:intron | 25.0% |
! | AACTAAACATAAATCTGAGA+TGG | - | chr1.2:62438405-62438424 | None:intergenic | 25.0% |
! | AAGATGAGAAAAAATAAGTG+GGG | - | chr1.2:62436198-62436217 | None:intergenic | 25.0% |
! | AATTCAGAAATTGAAGACAA+AGG | - | chr1.2:62434013-62434032 | None:intergenic | 25.0% |
! | ACAATTCAACAAAGGAATAT+AGG | - | chr1.2:62436517-62436536 | None:intergenic | 25.0% |
! | ACACCCTAAAAAAATTGTTT+CGG | - | chr1.2:62435410-62435429 | None:intergenic | 25.0% |
! | ACATTTCCATAAATACTGAT+AGG | + | chr1.2:62438021-62438040 | MS.gene07530:intron | 25.0% |
! | ACCAATGTATTCAATAAATC+AGG | - | chr1.2:62434915-62434934 | None:intergenic | 25.0% |
! | ACCTGATTTATTGAATACAT+TGG | + | chr1.2:62434911-62434930 | MS.gene07530:intron | 25.0% |
! | AGGCTAAAATTAAGATGAAT+TGG | - | chr1.2:62437817-62437836 | None:intergenic | 25.0% |
! | ATAATGACTAAAACAAGATC+TGG | - | chr1.2:62439446-62439465 | None:intergenic | 25.0% |
! | ATATGGATACATTTCCTTAA+GGG | - | chr1.2:62435667-62435686 | None:intergenic | 25.0% |
! | ATCTAACAGATATGATTGAT+TGG | + | chr1.2:62434291-62434310 | MS.gene07530:intron | 25.0% |
! | ATTATTATTTACTGTGGACT+TGG | + | chr1.2:62434415-62434434 | MS.gene07530:intron | 25.0% |
! | ATTCATTGGAAAAACTAACA+TGG | + | chr1.2:62436427-62436446 | MS.gene07530:intron | 25.0% |
! | CAAAGATGAGAAAAAATAAG+TGG | - | chr1.2:62436200-62436219 | None:intergenic | 25.0% |
! | CAAGTATGGAATTATAAAAG+AGG | + | chr1.2:62436479-62436498 | MS.gene07530:CDS | 25.0% |
! | CAATGAATATAAGTAGTTTC+AGG | - | chr1.2:62436415-62436434 | None:intergenic | 25.0% |
! | CTGAAACTACTTATATTCAT+TGG | + | chr1.2:62436413-62436432 | MS.gene07530:intron | 25.0% |
! | GAAAAAGAAAACGAAAAAGT+TGG | + | chr1.2:62437715-62437734 | MS.gene07530:CDS | 25.0% |
! | GCATAATAGTTAAAACTCTA+AGG | - | chr1.2:62434835-62434854 | None:intergenic | 25.0% |
! | GCTAAAATTAAGATGAATTG+GGG | - | chr1.2:62437815-62437834 | None:intergenic | 25.0% |
! | GGCTAAAATTAAGATGAATT+GGG | - | chr1.2:62437816-62437835 | None:intergenic | 25.0% |
! | GTCTTCAATTTCTGAATTAT+GGG | + | chr1.2:62434015-62434034 | MS.gene07530:CDS | 25.0% |
! | TAAATAAGATGAACAGATAG+CGG | - | chr1.2:62436161-62436180 | None:intergenic | 25.0% |
! | TAATATTGCTTAATCTGTTC+AGG | + | chr1.2:62438916-62438935 | MS.gene07530:intron | 25.0% |
! | TATAATACACCAAAAATGGT+GGG | - | chr1.2:62436975-62436994 | None:intergenic | 25.0% |
! | TGACAAAAGTTAATATTCTC+GGG | - | chr1.2:62439733-62439752 | None:intergenic | 25.0% |
! | TGTCTTCAATTTCTGAATTA+TGG | + | chr1.2:62434014-62434033 | MS.gene07530:CDS | 25.0% |
! | TTAAATGAAAAAGGGGAATT+AGG | - | chr1.2:62437837-62437856 | None:intergenic | 25.0% |
! | TTAAGGAAATGTATCCATAT+GGG | + | chr1.2:62435667-62435686 | MS.gene07530:intron | 25.0% |
! | TTCATTGGAAAAACTAACAT+GGG | + | chr1.2:62436428-62436447 | MS.gene07530:intron | 25.0% |
! | TTGGAAAAATATCTACAAGA+AGG | - | chr1.2:62437870-62437889 | None:intergenic | 25.0% |
!! | AAACAAACATTTTTCCTTGT+GGG | + | chr1.2:62439576-62439595 | MS.gene07530:intron | 25.0% |
!! | AAGAATTTACTGATGATGAT+GGG | + | chr1.2:62434611-62434630 | MS.gene07530:CDS | 25.0% |
!! | ATTTCAGAGCATTTCTTAAA+TGG | + | chr1.2:62433935-62433954 | MS.gene07530:intron | 25.0% |
!! | CTAATGTGATTTTCATTGTA+TGG | + | chr1.2:62438501-62438520 | MS.gene07530:intron | 25.0% |
!! | CTCTTTTATAATTCCATACT+TGG | - | chr1.2:62436481-62436500 | None:intergenic | 25.0% |
!! | GAAATGTTAATCCATACTTT+TGG | - | chr1.2:62436653-62436672 | None:intergenic | 25.0% |
!! | TATTTTTCCAATTTACCAGA+TGG | + | chr1.2:62437879-62437898 | MS.gene07530:intron | 25.0% |
!! | TCTTTTCCTATCAGTATTTA+TGG | - | chr1.2:62438030-62438049 | None:intergenic | 25.0% |
!!! | AACTAAACTATGATTTTGAC+AGG | - | chr1.2:62437604-62437623 | None:intergenic | 25.0% |
!!! | AAGTCCGAAACAATTTTTTT+AGG | + | chr1.2:62435403-62435422 | MS.gene07530:intron | 25.0% |
!!! | AATAGTAACGTAACTTGTTT+TGG | + | chr1.2:62439489-62439508 | MS.gene07530:intron | 25.0% |
!!! | AGATTTTTTGAGAACTAGTT+TGG | - | chr1.2:62435349-62435368 | None:intergenic | 25.0% |
!!! | AGTCCGAAACAATTTTTTTA+GGG | + | chr1.2:62435404-62435423 | MS.gene07530:intron | 25.0% |
!!! | AGTTACTAGTTAGTTTGTTA+CGG | - | chr1.2:62435089-62435108 | None:intergenic | 25.0% |
!!! | ATCACATGAAAGCATTTAAA+AGG | - | chr1.2:62436719-62436738 | None:intergenic | 25.0% |
!!! | ATGGCCATATATTTTTTATG+AGG | + | chr1.2:62436770-62436789 | MS.gene07530:intron | 25.0% |
!!! | CTTTTTCTGGTTTATTTATC+AGG | + | chr1.2:62439761-62439780 | MS.gene07530:intron | 25.0% |
!!! | TATATCGGTTTTTCATGTTT+AGG | + | chr1.2:62436562-62436581 | MS.gene07530:intron | 25.0% |
!!! | TCTTGTTTTAGATTTTGCAT+AGG | + | chr1.2:62434950-62434969 | MS.gene07530:intron | 25.0% |
!!! | TGTCATACTTTTTCTTTTTC+TGG | + | chr1.2:62439748-62439767 | MS.gene07530:intron | 25.0% |
!!! | TGTTGTTTTGGTTAAATTCA+AGG | + | chr1.2:62439240-62439259 | MS.gene07530:CDS | 25.0% |
!!! | TTAACTAAATTTTGATGCCT+AGG | + | chr1.2:62434779-62434798 | MS.gene07530:intron | 25.0% |
!!! | TTTAGAGTTTTTGGATGATT+TGG | + | chr1.2:62438423-62438442 | MS.gene07530:intron | 25.0% |
AAAATGGCAAAAGGAGATTA+AGG | + | chr1.2:62434495-62434514 | MS.gene07530:CDS | 30.0% | |
AAAGAGACAGGAAGAAAAAA+GGG | + | chr1.2:62437299-62437318 | MS.gene07530:CDS | 30.0% | |
AACTTCCTCTTCTTTCAAAA+AGG | - | chr1.2:62435969-62435988 | None:intergenic | 30.0% | |
AATACACATGTTTATGTCAC+TGG | + | chr1.2:62436334-62436353 | MS.gene07530:CDS | 30.0% | |
AATTAAACCATCATCTTCAC+TGG | - | chr1.2:62439809-62439828 | None:intergenic | 30.0% | |
AATTTACCAGATGGTGTAAA+TGG | + | chr1.2:62437888-62437907 | MS.gene07530:intron | 30.0% | |
ACTAGAAGAAGATGTTAAAG+AGG | + | chr1.2:62438961-62438980 | MS.gene07530:CDS | 30.0% | |
ACTTATGAAAAAGCTAGATG+AGG | - | chr1.2:62438151-62438170 | None:intergenic | 30.0% | |
AGATAAACCAGAAGAAAAGA+AGG | + | chr1.2:62436129-62436148 | MS.gene07530:CDS | 30.0% | |
AGTCATTATTCAACCAGTTT+AGG | + | chr1.2:62439457-62439476 | MS.gene07530:intron | 30.0% | |
ATACACATGTTTATGTCACT+GGG | + | chr1.2:62436335-62436354 | MS.gene07530:CDS | 30.0% | |
ATGAAGCTATTCTACTTTGT+CGG | - | chr1.2:62439676-62439695 | None:intergenic | 30.0% | |
ATGGAAATGTTTATCGAAAC+TGG | - | chr1.2:62438011-62438030 | None:intergenic | 30.0% | |
ATTTACACCATCTGGTAAAT+TGG | - | chr1.2:62437889-62437908 | None:intergenic | 30.0% | |
CAAAAAGACACTGCTATAAA+GGG | + | chr1.2:62435373-62435392 | MS.gene07530:intron | 30.0% | |
CATATGGATACATTTCCTTA+AGG | - | chr1.2:62435668-62435687 | None:intergenic | 30.0% | |
CTTAAGGAAATGTATCCATA+TGG | + | chr1.2:62435666-62435685 | MS.gene07530:intron | 30.0% | |
GAAAAGGAAATATTCCCATA+TGG | - | chr1.2:62435684-62435703 | None:intergenic | 30.0% | |
GAAAGTAGTATCACTGTTAT+TGG | - | chr1.2:62439127-62439146 | None:intergenic | 30.0% | |
GCTCAAAGCTAATTCAAATT+TGG | + | chr1.2:62438236-62438255 | MS.gene07530:intron | 30.0% | |
GTATAATACACCAAAAATGG+TGG | - | chr1.2:62436976-62436995 | None:intergenic | 30.0% | |
GTATTAATCTCAATTTCCCT+AGG | + | chr1.2:62435787-62435806 | MS.gene07530:intron | 30.0% | |
GTTAAATTCAAGGACAGAAA+AGG | + | chr1.2:62439250-62439269 | MS.gene07530:CDS | 30.0% | |
GTTTGGCATTAATATCAGTA+AGG | + | chr1.2:62439541-62439560 | MS.gene07530:intron | 30.0% | |
TAAAGAGACAGGAAGAAAAA+AGG | + | chr1.2:62437298-62437317 | MS.gene07530:CDS | 30.0% | |
TAGAATTGATGAATGGAAGA+TGG | + | chr1.2:62439287-62439306 | MS.gene07530:CDS | 30.0% | |
TATCAACATAGAGCTTAACA+CGG | - | chr1.2:62437280-62437299 | None:intergenic | 30.0% | |
TATGCAATTCATATGAAGCT+GGG | - | chr1.2:62437212-62437231 | None:intergenic | 30.0% | |
TATTTAAAGAAAGCTCCATC+AGG | - | chr1.2:62437647-62437666 | None:intergenic | 30.0% | |
TCGGGATATGTAAAAATGAA+AGG | - | chr1.2:62439715-62439734 | None:intergenic | 30.0% | |
TGAAAATAGGATATGGTTAC+AGG | - | chr1.2:62439077-62439096 | None:intergenic | 30.0% | |
TGAAATTGTTATGTGATAGG+AGG | + | chr1.2:62435898-62435917 | MS.gene07530:intron | 30.0% | |
TGCGTATAATACACCAAAAA+TGG | - | chr1.2:62436979-62436998 | None:intergenic | 30.0% | |
TGTCTTGCCAAAGATTAAAA+GGG | + | chr1.2:62436901-62436920 | MS.gene07530:intron | 30.0% | |
TTATGCAATTCATATGAAGC+TGG | - | chr1.2:62437213-62437232 | None:intergenic | 30.0% | |
TTGTTATGTAGTTTATGCTG+AGG | + | chr1.2:62434450-62434469 | MS.gene07530:intron | 30.0% | |
TTTAATTCAAACCAACTGTC+AGG | - | chr1.2:62436310-62436329 | None:intergenic | 30.0% | |
! | AATACACTTTTATGGTCTGA+AGG | + | chr1.2:62433971-62433990 | MS.gene07530:CDS | 30.0% |
! | ACTATCTTCAACGATTTTTG+AGG | - | chr1.2:62436017-62436036 | None:intergenic | 30.0% |
! | GAAACAAACATTTTTCCTTG+TGG | + | chr1.2:62439575-62439594 | MS.gene07530:intron | 30.0% |
! | GAAGAATTTACTGATGATGA+TGG | + | chr1.2:62434610-62434629 | MS.gene07530:CDS | 30.0% |
! | GATTTGAAATCTGTATCTTG+AGG | + | chr1.2:62434190-62434209 | MS.gene07530:intron | 30.0% |
! | TAGAAATGAGTACCTCTTTT+GGG | + | chr1.2:62436231-62436250 | MS.gene07530:intron | 30.0% |
! | TCTGGTTTATTTATCAGGTT+TGG | + | chr1.2:62439766-62439785 | MS.gene07530:intron | 30.0% |
! | TGCTTTATCCATCAAAGTTT+TGG | - | chr1.2:62435721-62435740 | None:intergenic | 30.0% |
! | TGTAACCATATCCTATTTTC+AGG | + | chr1.2:62439076-62439095 | MS.gene07530:intron | 30.0% |
! | TGTCATTTATTTCCCAAAAG+AGG | - | chr1.2:62436246-62436265 | None:intergenic | 30.0% |
! | TTAGAAATGAGTACCTCTTT+TGG | + | chr1.2:62436230-62436249 | MS.gene07530:intron | 30.0% |
!! | AAATTTTGATGCCTAGGATT+TGG | + | chr1.2:62434785-62434804 | MS.gene07530:intron | 30.0% |
!! | AATTTTGATGCCTAGGATTT+GGG | + | chr1.2:62434786-62434805 | MS.gene07530:intron | 30.0% |
!! | CTCTGAAATGTAAATTAGCA+AGG | - | chr1.2:62433924-62433943 | None:intergenic | 30.0% |
!! | TAAACTATGATTTTGACAGG+TGG | - | chr1.2:62437601-62437620 | None:intergenic | 30.0% |
!! | TGACAGTTGGTTTGAATTAA+AGG | + | chr1.2:62436309-62436328 | MS.gene07530:CDS | 30.0% |
!! | TTCAGTTGTTTCTTCCTTTA+TGG | - | chr1.2:62436065-62436084 | None:intergenic | 30.0% |
!!! | AGGGAAATTTTTAGCAATAG+GGG | - | chr1.2:62435062-62435081 | None:intergenic | 30.0% |
!!! | CAATTTTTTTAGGGTGTGTT+TGG | + | chr1.2:62435413-62435432 | MS.gene07530:intron | 30.0% |
!!! | GAGGGAAATTTTTAGCAATA+GGG | - | chr1.2:62435063-62435082 | None:intergenic | 30.0% |
!!! | GGCCTTGTGTTATTTATTTT+CGG | - | chr1.2:62436848-62436867 | None:intergenic | 30.0% |
!!! | TACATTGGTTTTGAAATGAC+AGG | + | chr1.2:62434926-62434945 | MS.gene07530:intron | 30.0% |
AAAATTCTTACCACTGAGCT+AGG | + | chr1.2:62434222-62434241 | MS.gene07530:intron | 35.0% | |
AAGAAAAAAGGGAGATGCAT+TGG | + | chr1.2:62437310-62437329 | MS.gene07530:CDS | 35.0% | |
AAGCTGACAAAGACAATAGA+CGG | + | chr1.2:62437693-62437712 | MS.gene07530:CDS | 35.0% | |
AAGTTGGAAGACAAAATGCT+TGG | + | chr1.2:62437731-62437750 | MS.gene07530:CDS | 35.0% | |
AATTCAAAGCTACGTATCAC+AGG | - | chr1.2:62437371-62437390 | None:intergenic | 35.0% | |
AATTGTTATGTGATAGGAGG+AGG | + | chr1.2:62435901-62435920 | MS.gene07530:intron | 35.0% | |
ACTAAAACAAGATCTGGAGA+AGG | - | chr1.2:62439440-62439459 | None:intergenic | 35.0% | |
ACTAACATGGGCAATATTGT+AGG | + | chr1.2:62436440-62436459 | MS.gene07530:intron | 35.0% | |
ACTGTTATTGGTACAGGTAT+GGG | - | chr1.2:62439115-62439134 | None:intergenic | 35.0% | |
AGCCTCTTGTGTAAAAAACA+GGG | - | chr1.2:62437008-62437027 | None:intergenic | 35.0% | |
AGGAAGAAAACGGATAAACA+AGG | - | chr1.2:62439322-62439341 | None:intergenic | 35.0% | |
AGTATCACTGTTATTGGTAC+AGG | - | chr1.2:62439121-62439140 | None:intergenic | 35.0% | |
ATAAGTGGGATAAGAGTCTT+AGG | + | chr1.2:62434638-62434657 | MS.gene07530:CDS | 35.0% | |
ATCAACATAGAGCTTAACAC+GGG | - | chr1.2:62437279-62437298 | None:intergenic | 35.0% | |
ATGTGGACGAGTTTGAAAAA+TGG | + | chr1.2:62434479-62434498 | MS.gene07530:CDS | 35.0% | |
ATTCAGAGAATCAACAACCT+TGG | - | chr1.2:62435829-62435848 | None:intergenic | 35.0% | |
ATTGATCCATTTACACCATC+TGG | - | chr1.2:62437897-62437916 | None:intergenic | 35.0% | |
CAGAAGCAAATTGGAAAACA+TGG | - | chr1.2:62438333-62438352 | None:intergenic | 35.0% | |
CCAAAAAGACACTGCTATAA+AGG | + | chr1.2:62435372-62435391 | MS.gene07530:intron | 35.0% | |
CGAGTTTGAAAAATGGCAAA+AGG | + | chr1.2:62434486-62434505 | MS.gene07530:CDS | 35.0% | |
CTAAATTTCAGCAGAAAGGT+AGG | + | chr1.2:62437512-62437531 | MS.gene07530:intron | 35.0% | |
CTCTCAGTATTGCAATTTGT+TGG | + | chr1.2:62438867-62438886 | MS.gene07530:intron | 35.0% | |
CTTGTGTAAAAAACAGGGTA+AGG | - | chr1.2:62437003-62437022 | None:intergenic | 35.0% | |
GATTTCAAATCACCTCATGA+CGG | - | chr1.2:62434181-62434200 | None:intergenic | 35.0% | |
GCATCAGAATCAGTTACTAT+CGG | - | chr1.2:62435995-62436014 | None:intergenic | 35.0% | |
GGAGCTTTCTTTAAATATGC+AGG | + | chr1.2:62437650-62437669 | MS.gene07530:intron | 35.0% | |
GGCCGAAAATAAATAACACA+AGG | + | chr1.2:62436843-62436862 | MS.gene07530:intron | 35.0% | |
GGTTTATTTATCAGGTTTGG+TGG | + | chr1.2:62439769-62439788 | MS.gene07530:intron | 35.0% | |
GTAAATTCTTCTTCACCATC+AGG | - | chr1.2:62434601-62434620 | None:intergenic | 35.0% | |
GTATGTGATAATCATCCTCA+GGG | + | chr1.2:62439217-62439236 | MS.gene07530:CDS | 35.0% | |
GTGTCTTGCCAAAGATTAAA+AGG | + | chr1.2:62436900-62436919 | MS.gene07530:intron | 35.0% | |
TAAAGCACAGACAGTACATT+TGG | + | chr1.2:62435179-62435198 | MS.gene07530:intron | 35.0% | |
TAAGTGGGATAAGAGTCTTA+GGG | + | chr1.2:62434639-62434658 | MS.gene07530:CDS | 35.0% | |
TATTATGCTCGAAGCTTATG+TGG | + | chr1.2:62434847-62434866 | MS.gene07530:intron | 35.0% | |
TCATCAATAGTAACATCCTC+AGG | - | chr1.2:62436364-62436383 | None:intergenic | 35.0% | |
TGAAGCAAAAAATACCAGTG+TGG | + | chr1.2:62436081-62436100 | MS.gene07530:CDS | 35.0% | |
TGTTTGGCATCTTGTCAAAT+TGG | + | chr1.2:62435142-62435161 | MS.gene07530:intron | 35.0% | |
TTACAGTGTTGCAATGAAAC+TGG | + | chr1.2:62439637-62439656 | MS.gene07530:intron | 35.0% | |
TTCCTTGTGGGTAAAGTATA+GGG | + | chr1.2:62439588-62439607 | MS.gene07530:intron | 35.0% | |
TTTCCTTGTGGGTAAAGTAT+AGG | + | chr1.2:62439587-62439606 | MS.gene07530:intron | 35.0% | |
TTTCTGCTGAAATTTAGCCA+GGG | - | chr1.2:62437509-62437528 | None:intergenic | 35.0% | |
! | AATCTTTGGCAAGACACTTT+TGG | - | chr1.2:62436897-62436916 | None:intergenic | 35.0% |
! | AGATTTTGCATAGGTCACAT+AGG | + | chr1.2:62434959-62434978 | MS.gene07530:intron | 35.0% |
! | CCTTTATAGCAGTGTCTTTT+TGG | - | chr1.2:62435375-62435394 | None:intergenic | 35.0% |
! | CTCTATGTTGATAAAGAGAC+AGG | + | chr1.2:62437287-62437306 | MS.gene07530:CDS | 35.0% |
! | GAAAGTGTAGAGGAAGAAAA+CGG | - | chr1.2:62439332-62439351 | None:intergenic | 35.0% |
! | GAACTGATTCTGTTTGAAAC+AGG | + | chr1.2:62437235-62437254 | MS.gene07530:intron | 35.0% |
! | GCTGTCCATCATTTTAGATT+TGG | + | chr1.2:62438680-62438699 | MS.gene07530:intron | 35.0% |
! | GTGGAAACATTTTCCAAGTA+TGG | + | chr1.2:62436465-62436484 | MS.gene07530:CDS | 35.0% |
! | GTTTTCTTCCTCTACACTTT+CGG | + | chr1.2:62439331-62439350 | MS.gene07530:intron | 35.0% |
! | TGATTTTCATTGTATGGCAC+AGG | + | chr1.2:62438507-62438526 | MS.gene07530:intron | 35.0% |
! | TGTTTCTGCAACTTCCATAA+AGG | + | chr1.2:62436048-62436067 | MS.gene07530:CDS | 35.0% |
! | TTTGGATGATTTGGAGTTTC+TGG | + | chr1.2:62438432-62438451 | MS.gene07530:intron | 35.0% |
!! | ACGTAGCTTTGAATTTGTCA+GGG | + | chr1.2:62437376-62437395 | MS.gene07530:intron | 35.0% |
!! | ACTAGTTAGTTTGTTACGGA+GGG | - | chr1.2:62435085-62435104 | None:intergenic | 35.0% |
!! | ATGATGATGGGACATATAAG+TGG | + | chr1.2:62434623-62434642 | MS.gene07530:CDS | 35.0% |
!! | ATTTTGATGCCTAGGATTTG+GGG | + | chr1.2:62434787-62434806 | MS.gene07530:intron | 35.0% |
!! | CATAAACACAAGGCTTTGTT+TGG | - | chr1.2:62433877-62433896 | None:intergenic | 35.0% |
!! | CATGTTTTCCAATTTGCTTC+TGG | + | chr1.2:62438331-62438350 | MS.gene07530:intron | 35.0% |
!! | GATGACCTTTTTGAAAGAAG+AGG | + | chr1.2:62435961-62435980 | MS.gene07530:CDS | 35.0% |
!! | TACGTAGCTTTGAATTTGTC+AGG | + | chr1.2:62437375-62437394 | MS.gene07530:intron | 35.0% |
!! | TACTAGTTAGTTTGTTACGG+AGG | - | chr1.2:62435086-62435105 | None:intergenic | 35.0% |
!! | TCTAAAATGATGGACAGCTA+TGG | - | chr1.2:62438678-62438697 | None:intergenic | 35.0% |
!! | TGATGATGGGACATATAAGT+GGG | + | chr1.2:62434624-62434643 | MS.gene07530:CDS | 35.0% |
!! | TGCATTGGTTACATATCTCA+AGG | + | chr1.2:62437325-62437344 | MS.gene07530:CDS | 35.0% |
!!! | AAAACCTTTGAGCTTTTTCG+AGG | + | chr1.2:62439518-62439537 | MS.gene07530:intron | 35.0% |
!!! | AAACCTTTGAGCTTTTTCGA+GGG | + | chr1.2:62439519-62439538 | MS.gene07530:intron | 35.0% |
!!! | GAAAACATCAGACTAGCTTT+TGG | + | chr1.2:62437169-62437188 | MS.gene07530:intron | 35.0% |
!!! | GGAGGGAAATTTTTAGCAAT+AGG | - | chr1.2:62435064-62435083 | None:intergenic | 35.0% |
!!! | GTGTTATTTATTTTCGGCCA+GGG | - | chr1.2:62436842-62436861 | None:intergenic | 35.0% |
!!! | TACCCTGTTTTTTACACAAG+AGG | + | chr1.2:62437003-62437022 | MS.gene07530:intron | 35.0% |
!!! | TGTGTTATTTATTTTCGGCC+AGG | - | chr1.2:62436843-62436862 | None:intergenic | 35.0% |
AAAATGTCGCAGATGTTGGA+TGG | + | chr1.2:62433769-62433788 | MS.gene07530:CDS | 40.0% | |
AAACCCTCGAAAAAGCTCAA+AGG | - | chr1.2:62439525-62439544 | None:intergenic | 40.0% | |
AAATGCACTCAGTGAACTCA+AGG | - | chr1.2:62437942-62437961 | None:intergenic | 40.0% | |
AAGACGAATTGGGTCTTTGA+GGG | - | chr1.2:62434051-62434070 | None:intergenic | 40.0% | |
AATCCCATCAACAAGACAGA+AGG | - | chr1.2:62435229-62435248 | None:intergenic | 40.0% | |
AATTCAAACCAACTGTCAGG+AGG | - | chr1.2:62436307-62436326 | None:intergenic | 40.0% | |
AATTCTTCTTCACCATCAGG+CGG | - | chr1.2:62434598-62434617 | None:intergenic | 40.0% | |
ACCTCATGACGGTTGTAAAA+TGG | - | chr1.2:62434170-62434189 | None:intergenic | 40.0% | |
ACTACCTTGACTGCATCTAT+AGG | - | chr1.2:62439004-62439023 | None:intergenic | 40.0% | |
AGAGTCTTAGGGCATATAAG+CGG | + | chr1.2:62434650-62434669 | MS.gene07530:CDS | 40.0% | |
ATACATGCCAGTGAAGATGA+TGG | + | chr1.2:62439799-62439818 | MS.gene07530:CDS | 40.0% | |
ATATCAACCCTCATTTCAGC+AGG | - | chr1.2:62438594-62438613 | None:intergenic | 40.0% | |
ATCCCTATACTTTACCCACA+AGG | - | chr1.2:62439593-62439612 | None:intergenic | 40.0% | |
ATCTTATCACCAGGTCGAAA+AGG | - | chr1.2:62437472-62437491 | None:intergenic | 40.0% | |
ATGGCAAAAGGAGATTAAGG+AGG | + | chr1.2:62434498-62434517 | MS.gene07530:CDS | 40.0% | |
ATGGGCAATATTGTAGGTTG+TGG | + | chr1.2:62436446-62436465 | MS.gene07530:intron | 40.0% | |
CAAAGATTAAAAGGGCAACC+TGG | + | chr1.2:62436909-62436928 | MS.gene07530:intron | 40.0% | |
CACTGTTATTGGTACAGGTA+TGG | - | chr1.2:62439116-62439135 | None:intergenic | 40.0% | |
CAGCAAACATGGAAATACAG+AGG | - | chr1.2:62439194-62439213 | None:intergenic | 40.0% | |
CAGCCTCTTGTGTAAAAAAC+AGG | - | chr1.2:62437009-62437028 | None:intergenic | 40.0% | |
CGAAGCTTATGTGGTTCATA+GGG | + | chr1.2:62434856-62434875 | MS.gene07530:intron | 40.0% | |
CTAATAAACCTCCTGACAGT+TGG | + | chr1.2:62436296-62436315 | MS.gene07530:CDS | 40.0% | |
CTGGCTAAATTTCAGCAGAA+AGG | + | chr1.2:62437508-62437527 | MS.gene07530:CDS | 40.0% | |
CTGTTATTGGTACAGGTATG+GGG | - | chr1.2:62439114-62439133 | None:intergenic | 40.0% | |
CTTTCTGCTGAAATTTAGCC+AGG | - | chr1.2:62437510-62437529 | None:intergenic | 40.0% | |
GAAGACAAAATGCTTGGATG+GGG | + | chr1.2:62437737-62437756 | MS.gene07530:CDS | 40.0% | |
GACGGTTGTAAAATGGTCAA+TGG | - | chr1.2:62434163-62434182 | None:intergenic | 40.0% | |
GCGTGCATAGAATTGATGAA+TGG | + | chr1.2:62439280-62439299 | MS.gene07530:CDS | 40.0% | |
GGAAGACAAAATGCTTGGAT+GGG | + | chr1.2:62437736-62437755 | MS.gene07530:CDS | 40.0% | |
GGAGAGAATCAACAACAACT+TGG | + | chr1.2:62433801-62433820 | MS.gene07530:CDS | 40.0% | |
GGTATGTGATAATCATCCTC+AGG | + | chr1.2:62439216-62439235 | MS.gene07530:intron | 40.0% | |
GTCAAACACAACAGAAACAC+AGG | - | chr1.2:62439160-62439179 | None:intergenic | 40.0% | |
GTGTTTGGATTGAGGGTTTA+GGG | + | chr1.2:62435428-62435447 | MS.gene07530:intron | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | - | chr1.2:62437054-62437073 | None:intergenic | 40.0% | |
TAAACCTAACCCCAAATCCT+AGG | - | chr1.2:62434799-62434818 | None:intergenic | 40.0% | |
TAATTAACCATGCCACAGTC+CGG | + | chr1.2:62439824-62439843 | MS.gene07530:CDS | 40.0% | |
TAGTTAACTATCACTCCTGC+TGG | + | chr1.2:62437619-62437638 | MS.gene07530:intron | 40.0% | |
TATAAGCAGCATAGCCTACT+TGG | + | chr1.2:62439392-62439411 | MS.gene07530:intron | 40.0% | |
TATTGACCTCATTCTGTTCC+AGG | + | chr1.2:62436270-62436289 | MS.gene07530:intron | 40.0% | |
TCAACATAGAGCTTAACACG+GGG | - | chr1.2:62437278-62437297 | None:intergenic | 40.0% | |
TCAGTGAACTCAAGGATCAA+CGG | - | chr1.2:62437934-62437953 | None:intergenic | 40.0% | |
TCGAAGCTTATGTGGTTCAT+AGG | + | chr1.2:62434855-62434874 | MS.gene07530:intron | 40.0% | |
TGGAAGACAAAATGCTTGGA+TGG | + | chr1.2:62437735-62437754 | MS.gene07530:CDS | 40.0% | |
TGTACCTCAGAGAAGACATA+AGG | - | chr1.2:62433828-62433847 | None:intergenic | 40.0% | |
TGTATATCAGGAACCATCAG+TGG | + | chr1.2:62437417-62437436 | MS.gene07530:intron | 40.0% | |
TGTGTTTGGATTGAGGGTTT+AGG | + | chr1.2:62435427-62435446 | MS.gene07530:intron | 40.0% | |
TGTTTGGATTGAGGGTTTAG+GGG | + | chr1.2:62435429-62435448 | MS.gene07530:intron | 40.0% | |
TTAACCAAAACAACACCCTG+AGG | - | chr1.2:62439235-62439254 | None:intergenic | 40.0% | |
TTAGGGTGTGTTTGGATTGA+GGG | + | chr1.2:62435421-62435440 | MS.gene07530:intron | 40.0% | |
TTTCCCTTCTGTCTTGCAAA+AGG | + | chr1.2:62437093-62437112 | MS.gene07530:intron | 40.0% | |
! | AAATCAAGCCGAAAGTGTAG+AGG | - | chr1.2:62439342-62439361 | None:intergenic | 40.0% |
! | ACAACCTTTTGCAAGACAGA+AGG | - | chr1.2:62437100-62437119 | None:intergenic | 40.0% |
! | ACACTGAAGGTGTATTAAGG+TGG | + | chr1.2:62435017-62435036 | MS.gene07530:intron | 40.0% |
! | ACCATTTTACAACCGTCATG+AGG | + | chr1.2:62434166-62434185 | MS.gene07530:intron | 40.0% |
! | ATTGTCTTTGTCAGCTTGCT+TGG | - | chr1.2:62437690-62437709 | None:intergenic | 40.0% |
! | CAACCTTTTGCAAGACAGAA+GGG | - | chr1.2:62437099-62437118 | None:intergenic | 40.0% |
! | CAGGTTGCCCTTTTAATCTT+TGG | - | chr1.2:62436911-62436930 | None:intergenic | 40.0% |
! | CATTTCCTTAAGGGTGTGTT+TGG | - | chr1.2:62435658-62435677 | None:intergenic | 40.0% |
! | CTAGCAATCCAACTTTTGGA+TGG | + | chr1.2:62437442-62437461 | MS.gene07530:CDS | 40.0% |
! | GAACCTTCTGTCTTGTTGAT+GGG | + | chr1.2:62435223-62435242 | MS.gene07530:intron | 40.0% |
! | GCTATGCTGCTTATATGACA+AGG | - | chr1.2:62439387-62439406 | None:intergenic | 40.0% |
! | TGAACCTTCTGTCTTGTTGA+TGG | + | chr1.2:62435222-62435241 | MS.gene07530:intron | 40.0% |
! | TGAGTTCACTGAGTGCATTT+TGG | + | chr1.2:62437942-62437961 | MS.gene07530:intron | 40.0% |
! | TGTATTTCCATGTTTGCTGC+AGG | + | chr1.2:62439195-62439214 | MS.gene07530:intron | 40.0% |
! | TTTAGGGTGTGTTTGGATTG+AGG | + | chr1.2:62435420-62435439 | MS.gene07530:intron | 40.0% |
! | TTTTCATTGTATGGCACAGG+TGG | + | chr1.2:62438510-62438529 | MS.gene07530:intron | 40.0% |
!! | GCTAGTTCTAAAGAGTTGCT+TGG | - | chr1.2:62436869-62436888 | None:intergenic | 40.0% |
!! | TATGTCTTCTCTGAGGTACA+AGG | + | chr1.2:62433828-62433847 | MS.gene07530:CDS | 40.0% |
!! | TTACACAAGAGGCTGTTTTC+AGG | + | chr1.2:62437014-62437033 | MS.gene07530:intron | 40.0% |
!!! | AACATCAGACTAGCTTTTGG+AGG | + | chr1.2:62437172-62437191 | MS.gene07530:intron | 40.0% |
!!! | AGACTAGCTTTTGGAGGTTT+TGG | + | chr1.2:62437178-62437197 | MS.gene07530:intron | 40.0% |
!!! | GCATGCTGACTTTCTTTTGT+TGG | + | chr1.2:62439414-62439433 | MS.gene07530:intron | 40.0% |
!!! | TTTGAGCTTTTTCGAGGGTT+TGG | + | chr1.2:62439524-62439543 | MS.gene07530:intron | 40.0% |
AAAGAGGAATGCACGAAGCT+TGG | + | chr1.2:62438977-62438996 | MS.gene07530:CDS | 45.0% | |
AAAGGAGATTAAGGAGGCTG+AGG | + | chr1.2:62434504-62434523 | MS.gene07530:CDS | 45.0% | |
AACTCAAGGATCAACGGACA+TGG | - | chr1.2:62437928-62437947 | None:intergenic | 45.0% | |
AATACCAGTGTGGTAGCTGT+TGG | + | chr1.2:62436091-62436110 | MS.gene07530:CDS | 45.0% | |
AATTAACCATGCCACAGTCC+GGG | + | chr1.2:62439825-62439844 | MS.gene07530:CDS | 45.0% | |
ACCTGCAGTTGAAGACGAAT+TGG | - | chr1.2:62434062-62434081 | None:intergenic | 45.0% | |
ACTCAAGGATCAACGGACAT+GGG | - | chr1.2:62437927-62437946 | None:intergenic | 45.0% | |
AGAAAGTCAGCATGCCAAGT+AGG | - | chr1.2:62439409-62439428 | None:intergenic | 45.0% | |
AGAGGAAGATGCTAAGCGAT+TGG | + | chr1.2:62439852-62439871 | MS.gene07530:CDS | 45.0% | |
ATACCAGTGTGGTAGCTGTT+GGG | + | chr1.2:62436092-62436111 | MS.gene07530:CDS | 45.0% | |
CAAGTGGAAGCTTCGGAATT+CGG | + | chr1.2:62434529-62434548 | MS.gene07530:CDS | 45.0% | |
CACACTCACCAGAAGCAAAT+TGG | - | chr1.2:62438342-62438361 | None:intergenic | 45.0% | |
CAGGACTGAACATATAGCGA+AGG | - | chr1.2:62438575-62438594 | None:intergenic | 45.0% | |
CCTGCAGTTGAAGACGAATT+GGG | - | chr1.2:62434061-62434080 | None:intergenic | 45.0% | |
GAAGACGAATTGGGTCTTTG+AGG | - | chr1.2:62434052-62434071 | None:intergenic | 45.0% | |
GACATCGGAATCTTATCACC+AGG | - | chr1.2:62437481-62437500 | None:intergenic | 45.0% | |
GAGTCTTAGGGCATATAAGC+GGG | + | chr1.2:62434651-62434670 | MS.gene07530:CDS | 45.0% | |
GATGTTGGATGGTACGTTCT+TGG | + | chr1.2:62433780-62433799 | MS.gene07530:CDS | 45.0% | |
GGTCTGAAGGAAGAACTGAA+TGG | + | chr1.2:62433984-62434003 | MS.gene07530:CDS | 45.0% | |
GTCATCTCTTCAACCCCATA+AGG | - | chr1.2:62435947-62435966 | None:intergenic | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | - | chr1.2:62437048-62437067 | None:intergenic | 45.0% | |
GTTCAGTCCTGCTGAAATGA+GGG | + | chr1.2:62438584-62438603 | MS.gene07530:CDS | 45.0% | |
GTTTGGATTGAGGGTTTAGG+GGG | + | chr1.2:62435430-62435449 | MS.gene07530:intron | 45.0% | |
TAGCATCTTCCTCTAGATCC+CGG | - | chr1.2:62439846-62439865 | None:intergenic | 45.0% | |
TAGCGAAGGACAACAGTTGT+TGG | - | chr1.2:62438561-62438580 | None:intergenic | 45.0% | |
TAGCTTCCTGGAACAGAATG+AGG | - | chr1.2:62436279-62436298 | None:intergenic | 45.0% | |
TCACATACCTGCAGCAAACA+TGG | - | chr1.2:62439205-62439224 | None:intergenic | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | - | chr1.2:62437047-62437066 | None:intergenic | 45.0% | |
TCCATCCAAACACACCCTTA+AGG | + | chr1.2:62435650-62435669 | MS.gene07530:intron | 45.0% | |
TGGACCTATAGATGCAGTCA+AGG | + | chr1.2:62438997-62439016 | MS.gene07530:CDS | 45.0% | |
TGGTCCTTATGTCTTCTCTG+AGG | + | chr1.2:62433821-62433840 | MS.gene07530:CDS | 45.0% | |
TGTGTTTGGATGGAGGGTTT+AGG | - | chr1.2:62435644-62435663 | None:intergenic | 45.0% | |
TGTTCAGTCCTGCTGAAATG+AGG | + | chr1.2:62438583-62438602 | MS.gene07530:CDS | 45.0% | |
TTATGCTGAGGCTGAAGATG+TGG | + | chr1.2:62434462-62434481 | MS.gene07530:CDS | 45.0% | |
TTTGGATGGAGGGTTTAGGA+GGG | - | chr1.2:62435640-62435659 | None:intergenic | 45.0% | |
TTTGGATTGAGGGTTTAGGG+GGG | + | chr1.2:62435431-62435450 | MS.gene07530:intron | 45.0% | |
! | CAGGAGGTTTATTAGCTTCC+TGG | - | chr1.2:62436291-62436310 | None:intergenic | 45.0% |
! | CAGTTTGGTGAGGAACTTGA+AGG | + | chr1.2:62439877-62439896 | MS.gene07530:CDS | 45.0% |
! | GCAGACACCTTCTTTTCTTC+TGG | - | chr1.2:62436139-62436158 | None:intergenic | 45.0% |
! | GGGACACTGAAGGTGTATTA+AGG | + | chr1.2:62435014-62435033 | MS.gene07530:intron | 45.0% |
! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr1.2:62435650-62435669 | None:intergenic | 45.0% |
! | TCCTTAAGGGTGTGTTTGGA+TGG | - | chr1.2:62435654-62435673 | None:intergenic | 45.0% |
! | TGAAGCAAGAAAGCATGCTG+TGG | + | chr1.2:62438360-62438379 | MS.gene07530:intron | 45.0% |
! | TTAAGGGTGTGTTTGGATGG+AGG | - | chr1.2:62435651-62435670 | None:intergenic | 45.0% |
!! | AGTTAGTTTGTTACGGAGGG+AGG | - | chr1.2:62435082-62435101 | None:intergenic | 45.0% |
!! | GGCTCTAGCAATCCAACTTT+TGG | + | chr1.2:62437438-62437457 | MS.gene07530:CDS | 45.0% |
!! | GTTAGTTTGTTACGGAGGGA+GGG | - | chr1.2:62435081-62435100 | None:intergenic | 45.0% |
!!! | TCATCCTCAGGGTGTTGTTT+TGG | + | chr1.2:62439228-62439247 | MS.gene07530:CDS | 45.0% |
!!! | TTTTTTTAATTTTTTATGAA+TGG | + | chr1.2:62436751-62436770 | MS.gene07530:intron | 5.0% |
AAAGCTCGTGTACCAACCTG+AGG | - | chr1.2:62434679-62434698 | None:intergenic | 50.0% | |
AAGGCGCACCATCCAAAAGT+TGG | - | chr1.2:62437453-62437472 | None:intergenic | 50.0% | |
AAGGTGTAGCCCAGTGGTAT+GGG | + | chr1.2:62434989-62435008 | MS.gene07530:intron | 50.0% | |
ACATGTGCCCAGAAAAGGGA+AGG | - | chr1.2:62436808-62436827 | None:intergenic | 50.0% | |
ACATGTGCTCAGCAATACCC+TGG | + | chr1.2:62436822-62436841 | MS.gene07530:intron | 50.0% | |
AGGTCACATAGGATCCCTGA+AGG | + | chr1.2:62434970-62434989 | MS.gene07530:intron | 50.0% | |
ATGCTTGGATGGGGTATGCT+TGG | + | chr1.2:62437746-62437765 | MS.gene07530:intron | 50.0% | |
ATGTGCCCAGAAAAGGGAAG+GGG | - | chr1.2:62436806-62436825 | None:intergenic | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr1.2:62437070-62437089 | MS.gene07530:intron | 50.0% | |
CATGTGCCCAGAAAAGGGAA+GGG | - | chr1.2:62436807-62436826 | None:intergenic | 50.0% | |
CCCAATTCGTCTTCAACTGC+AGG | + | chr1.2:62434058-62434077 | MS.gene07530:CDS | 50.0% | |
GAGCACATGTGCCCAGAAAA+GGG | - | chr1.2:62436812-62436831 | None:intergenic | 50.0% | |
GCAAGACAGAAGGGAAACCT+TGG | - | chr1.2:62437090-62437109 | None:intergenic | 50.0% | |
GCTAAGCGATTGGAGCAGTT+TGG | + | chr1.2:62439862-62439881 | MS.gene07530:CDS | 50.0% | |
GCTTATGTGGTTCATAGGGC+TGG | + | chr1.2:62434860-62434879 | MS.gene07530:intron | 50.0% | |
GTTTGGATGGAGGGTTTAGG+AGG | - | chr1.2:62435641-62435660 | None:intergenic | 50.0% | |
TAGGGGTCGAACACTAGAGT+CGG | - | chr1.2:62435045-62435064 | None:intergenic | 50.0% | |
TCACATGTGTAGCGATGCAC+TGG | - | chr1.2:62438655-62438674 | None:intergenic | 50.0% | |
TGAGCACATGTGCCCAGAAA+AGG | - | chr1.2:62436813-62436832 | None:intergenic | 50.0% | |
TGGATTGCTAGAGCCACTGA+TGG | - | chr1.2:62437433-62437452 | None:intergenic | 50.0% | |
TTAGCCAGGGAGACAGACAT+CGG | - | chr1.2:62437496-62437515 | None:intergenic | 50.0% | |
TTATGTCACTGGGTTGCCTG+AGG | + | chr1.2:62436345-62436364 | MS.gene07530:CDS | 50.0% | |
TTGGATGGAGGGTTTAGGAG+GGG | - | chr1.2:62435639-62435658 | None:intergenic | 50.0% | |
TTGGATTGAGGGTTTAGGGG+GGG | + | chr1.2:62435432-62435451 | MS.gene07530:intron | 50.0% | |
! | AAAATGGTGGGACCCCTTAC+CGG | - | chr1.2:62436963-62436982 | None:intergenic | 50.0% |
! | CTGGTAGCGCTTTGCCTTAT+GGG | + | chr1.2:62435930-62435949 | MS.gene07530:CDS | 50.0% |
! | GAGCTTAACACGGGGCTTTT+TGG | - | chr1.2:62437270-62437289 | None:intergenic | 50.0% |
! | GATGCCTAGGATTTGGGGTT+AGG | + | chr1.2:62434792-62434811 | MS.gene07530:intron | 50.0% |
! | GTAAGGGGTCCCACCATTTT+TGG | + | chr1.2:62436963-62436982 | MS.gene07530:intron | 50.0% |
! | TATAAGCGGGTTCCTCAGGT+TGG | + | chr1.2:62434664-62434683 | MS.gene07530:intron | 50.0% |
! | TCTGGTAGCGCTTTGCCTTA+TGG | + | chr1.2:62435929-62435948 | MS.gene07530:CDS | 50.0% |
! | TGGTAGCGCTTTGCCTTATG+GGG | + | chr1.2:62435931-62435950 | MS.gene07530:CDS | 50.0% |
!! | CAAGGACAGAAAAGGTGCTC+AGG | + | chr1.2:62439258-62439277 | MS.gene07530:CDS | 50.0% |
!!! | ACACGGGGCTTTTTGGTTTC+TGG | - | chr1.2:62437263-62437282 | None:intergenic | 50.0% |
AAGGGAAACCTTGGCGCAAC+TGG | - | chr1.2:62437081-62437100 | None:intergenic | 55.0% | |
ACCACTGGGCTACACCTTCA+GGG | - | chr1.2:62434987-62435006 | None:intergenic | 55.0% | |
ACTAAAGCTCCCGCATACGC+AGG | + | chr1.2:62436935-62436954 | MS.gene07530:intron | 55.0% | |
AGACCTTCAACACCGCCTGA+TGG | + | chr1.2:62434583-62434602 | MS.gene07530:CDS | 55.0% | |
AGGGGTCGAACACTAGAGTC+GGG | - | chr1.2:62435044-62435063 | None:intergenic | 55.0% | |
AGTGTCCCAACCCATACCAC+TGG | - | chr1.2:62435002-62435021 | None:intergenic | 55.0% | |
ATGGAGGGTTTAGGAGGGGA+AGG | - | chr1.2:62435635-62435654 | None:intergenic | 55.0% | |
ATTGAGGGTTTAGGGGGGGA+AGG | + | chr1.2:62435436-62435455 | MS.gene07530:intron | 55.0% | |
CACTGTCAGCATATCGCACG+AGG | + | chr1.2:62434131-62434150 | MS.gene07530:intron | 55.0% | |
CTAAAGCTCCCGCATACGCA+GGG | + | chr1.2:62436936-62436955 | MS.gene07530:intron | 55.0% | |
CTTCCCAACAGCTACCACAC+TGG | - | chr1.2:62436098-62436117 | None:intergenic | 55.0% | |
GATTCCGATGTCTGTCTCCC+TGG | + | chr1.2:62437489-62437508 | MS.gene07530:CDS | 55.0% | |
GTAGCCCAGTGGTATGGGTT+GGG | + | chr1.2:62434994-62435013 | MS.gene07530:intron | 55.0% | |
GTGGAAGCTTCGGAATTCGG+TGG | + | chr1.2:62434532-62434551 | MS.gene07530:CDS | 55.0% | |
GTGTCCCAACCCATACCACT+GGG | - | chr1.2:62435001-62435020 | None:intergenic | 55.0% | |
GTGTGGTAGCTGTTGGGAAG+AGG | + | chr1.2:62436098-62436117 | MS.gene07530:CDS | 55.0% | |
TACCACTGGGCTACACCTTC+AGG | - | chr1.2:62434988-62435007 | None:intergenic | 55.0% | |
TGAGGCGCAAGTGGAAGCTT+CGG | + | chr1.2:62434522-62434541 | MS.gene07530:CDS | 55.0% | |
TGGAGGGTTTAGGAGGGGAA+GGG | - | chr1.2:62435634-62435653 | None:intergenic | 55.0% | |
TGTAGCCCAGTGGTATGGGT+TGG | + | chr1.2:62434993-62435012 | MS.gene07530:intron | 55.0% | |
TTCCTCTAGATCCCGGACTG+TGG | - | chr1.2:62439839-62439858 | None:intergenic | 55.0% | |
TTGAGGGTTTAGGGGGGGAA+GGG | + | chr1.2:62435437-62435456 | MS.gene07530:intron | 55.0% | |
! | GAAGCTTCGGAATTCGGTGG+TGG | + | chr1.2:62434535-62434554 | MS.gene07530:CDS | 55.0% |
! | GAAGGTGTAGCCCAGTGGTA+TGG | + | chr1.2:62434988-62435007 | MS.gene07530:intron | 55.0% |
! | GCGATTGGAGCAGTTTGGTG+AGG | + | chr1.2:62439867-62439886 | MS.gene07530:CDS | 55.0% |
! | GGCATATAAGCGGGTTCCTC+AGG | + | chr1.2:62434660-62434679 | MS.gene07530:CDS | 55.0% |
! | GTGAGCCCCTTCCCTTTTCT+GGG | + | chr1.2:62436798-62436817 | MS.gene07530:intron | 55.0% |
! | TCACCATCAGGCGGTGTTGA+AGG | - | chr1.2:62434589-62434608 | None:intergenic | 55.0% |
!! | CACTTGCTGTCCTAGCTCAG+TGG | - | chr1.2:62434235-62434254 | None:intergenic | 55.0% |
!! | GGTATGGGTTGGGACACTGA+AGG | + | chr1.2:62435004-62435023 | MS.gene07530:intron | 55.0% |
!! | TTCGGTGGTGGTGGTGTAGT+AGG | + | chr1.2:62434547-62434566 | MS.gene07530:CDS | 55.0% |
AAGCTCCATCAGGCACCAGC+AGG | - | chr1.2:62437637-62437656 | None:intergenic | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | - | chr1.2:62435631-62435650 | None:intergenic | 60.0% | |
CATACGCAGGGTCCGGTAAG+GGG | + | chr1.2:62436948-62436967 | MS.gene07530:intron | 60.0% | |
CTAGATCCCGGACTGTGGCA+TGG | - | chr1.2:62439834-62439853 | None:intergenic | 60.0% | |
CTTACCGGACCCTGCGTATG+CGG | - | chr1.2:62436948-62436967 | None:intergenic | 60.0% | |
GCATACGCAGGGTCCGGTAA+GGG | + | chr1.2:62436947-62436966 | MS.gene07530:intron | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | - | chr1.2:62435630-62435649 | None:intergenic | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | - | chr1.2:62435629-62435648 | None:intergenic | 60.0% | |
TAAGGAGGCTGAGGCGCAAG+TGG | + | chr1.2:62434513-62434532 | MS.gene07530:CDS | 60.0% | |
TCACTCCTGCTGGTGCCTGA+TGG | + | chr1.2:62437629-62437648 | MS.gene07530:intron | 60.0% | |
TGATAGGAGGAGGCCACGTC+TGG | + | chr1.2:62435911-62435930 | MS.gene07530:intron | 60.0% | |
TGCCACAGTCCGGGATCTAG+AGG | + | chr1.2:62439834-62439853 | MS.gene07530:CDS | 60.0% | |
TTACCGGACCCTGCGTATGC+GGG | - | chr1.2:62436947-62436966 | None:intergenic | 60.0% | |
! | AGGCAAAGCGCTACCAGACG+TGG | - | chr1.2:62435927-62435946 | None:intergenic | 60.0% |
! | GATGGTGCGCCTTTTCGACC+TGG | + | chr1.2:62437460-62437479 | MS.gene07530:CDS | 60.0% |
! | GCTTCGGAATTCGGTGGTGG+TGG | + | chr1.2:62434538-62434557 | MS.gene07530:CDS | 60.0% |
! | GGTGAGCCCCTTCCCTTTTC+TGG | + | chr1.2:62436797-62436816 | MS.gene07530:intron | 60.0% |
! | TCCCTGAAGGTGTAGCCCAG+TGG | + | chr1.2:62434983-62435002 | MS.gene07530:intron | 60.0% |
! | TGCGGGAGCTTTAGTGCACC+AGG | - | chr1.2:62436930-62436949 | None:intergenic | 60.0% |
AGGGTTTAGGGGGGGAAGGG+AGG | + | chr1.2:62435440-62435459 | MS.gene07530:intron | 65.0% | |
CGCATACGCAGGGTCCGGTA+AGG | + | chr1.2:62436946-62436965 | MS.gene07530:intron | 65.0% | |
GGGTTTAGGGGGGGAAGGGA+GGG | + | chr1.2:62435441-62435460 | MS.gene07530:intron | 65.0% | |
GGTTTAGGGGGGGAAGGGAG+GGG | + | chr1.2:62435442-62435461 | MS.gene07530:intron | 65.0% | |
TAGGAGGGGAAGGGAGGGGA+GGG | - | chr1.2:62435625-62435644 | None:intergenic | 65.0% | |
TTAGGAGGGGAAGGGAGGGG+AGG | - | chr1.2:62435626-62435645 | None:intergenic | 65.0% | |
GCTCCCGCATACGCAGGGTC+CGG | + | chr1.2:62436941-62436960 | MS.gene07530:intron | 70.0% | |
TAGGGGGGGAAGGGAGGGGA+TGG | + | chr1.2:62435446-62435465 | MS.gene07530:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 62433766 | 62439906 | 62433766 | ID=MS.gene07530 |
chr1.2 | mRNA | 62433766 | 62439906 | 62433766 | ID=MS.gene07530.t1;Parent=MS.gene07530 |
chr1.2 | exon | 62433766 | 62433849 | 62433766 | ID=MS.gene07530.t1.exon1;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62433766 | 62433849 | 62433766 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62433942 | 62434079 | 62433942 | ID=MS.gene07530.t1.exon2;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62433942 | 62434079 | 62433942 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62434461 | 62434681 | 62434461 | ID=MS.gene07530.t1.exon3;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62434461 | 62434681 | 62434461 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62435917 | 62436150 | 62435917 | ID=MS.gene07530.t1.exon4;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62435917 | 62436150 | 62435917 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62436292 | 62436384 | 62436292 | ID=MS.gene07530.t1.exon5;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62436292 | 62436384 | 62436292 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62436462 | 62436500 | 62436462 | ID=MS.gene07530.t1.exon6;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62436462 | 62436500 | 62436462 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62437257 | 62437346 | 62437257 | ID=MS.gene07530.t1.exon7;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62437257 | 62437346 | 62437257 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62437427 | 62437529 | 62437427 | ID=MS.gene07530.t1.exon8;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62437427 | 62437529 | 62437427 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62437672 | 62437758 | 62437672 | ID=MS.gene07530.t1.exon9;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62437672 | 62437758 | 62437672 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62438529 | 62438605 | 62438529 | ID=MS.gene07530.t1.exon10;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62438529 | 62438605 | 62438529 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62438938 | 62439018 | 62438938 | ID=MS.gene07530.t1.exon11;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62438938 | 62439018 | 62438938 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62439217 | 62439308 | 62439217 | ID=MS.gene07530.t1.exon12;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62439217 | 62439308 | 62439217 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
chr1.2 | exon | 62439783 | 62439906 | 62439783 | ID=MS.gene07530.t1.exon13;Parent=MS.gene07530.t1 |
chr1.2 | CDS | 62439783 | 62439906 | 62439783 | ID=cds.MS.gene07530.t1;Parent=MS.gene07530.t1 |
Gene Sequence |
Protein sequence |