Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08322.t1 | RHN42372.1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.60E-296 | 1028.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08322.t1 | A0JMW6 | 23.6 | 254 | 173 | 6 | 263 | 513 | 205 | 440 | 3.3e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08322.t1 | A0A396GMQ1 | 98.5 | 587 | 9 | 0 | 1 | 587 | 35 | 621 | 1.2e-296 | 1028.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene08322 | -0.834686 | 2.60E-56 | -1.69E-46 |
| MS.gene049180 | MS.gene08322 | 0.868762 | 5.13E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene08322 | -0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene08322 | 0.814049 | 1.88E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene08322 | 0.842906 | 1.94E-58 | -1.69E-46 |
| MS.gene050129 | MS.gene08322 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene08322 | -0.854043 | 1.60E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene08322 | -0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene08322 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene08322 | -0.82544 | 4.68E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene08322 | -0.840925 | 6.48E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene08322 | -0.848771 | 4.96E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene08322 | -0.807206 | 5.66E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene08322 | -0.827681 | 1.37E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene08322 | -0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene050818 | MS.gene08322 | 0.809455 | 1.88E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene08322 | -0.845021 | 5.26E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene08322 | -0.84446 | 7.46E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene08322 | 0.819303 | 1.25E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene08322 | -0.819681 | 1.02E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene08322 | 0.810852 | 9.38E-51 | -1.69E-46 |
| MS.gene051946 | MS.gene08322 | 0.834423 | 3.02E-56 | -1.69E-46 |
| MS.gene051963 | MS.gene08322 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene052015 | MS.gene08322 | 0.877804 | 4.68E-69 | -1.69E-46 |
| MS.gene052164 | MS.gene08322 | -0.8429 | 1.95E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene08322 | -0.815871 | 7.40E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene08322 | -0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene052494 | MS.gene08322 | 0.858389 | 8.52E-63 | -1.69E-46 |
| MS.gene052503 | MS.gene08322 | -0.843796 | 1.12E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene08322 | -0.852643 | 4.03E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene08322 | -0.855638 | 5.52E-62 | -1.69E-46 |
| MS.gene053097 | MS.gene08322 | 0.858186 | 9.79E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene08322 | -0.862846 | 3.79E-64 | -1.69E-46 |
| MS.gene053436 | MS.gene08322 | -0.806097 | 9.71E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene08322 | 0.842587 | 2.36E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene08322 | -0.810604 | 1.06E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene08322 | -0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene08322 | -0.806253 | 9.00E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene08322 | 0.809951 | 1.47E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene08322 | -0.87461 | 5.90E-68 | -1.69E-46 |
| MS.gene054954 | MS.gene08322 | -0.808762 | 2.64E-50 | -1.69E-46 |
| MS.gene054959 | MS.gene08322 | 0.800647 | 1.31E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene08322 | -0.810216 | 1.29E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene08322 | -0.838738 | 2.41E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene08322 | -0.849609 | 2.90E-60 | -1.69E-46 |
| MS.gene055719 | MS.gene08322 | 0.872573 | 2.87E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene08322 | -0.857672 | 1.39E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene08322 | -0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene08322 | -0.802341 | 5.87E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene08322 | 0.816846 | 4.48E-52 | -1.69E-46 |
| MS.gene056311 | MS.gene08322 | 0.821688 | 3.53E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene08322 | -0.84291 | 1.94E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene08322 | -0.821137 | 4.74E-53 | -1.69E-46 |
| MS.gene056550 | MS.gene08322 | 0.80907 | 2.27E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene08322 | -0.808233 | 3.43E-50 | -1.69E-46 |
| MS.gene056988 | MS.gene08322 | 0.803649 | 3.15E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene08322 | 0.832823 | 7.59E-56 | -1.69E-46 |
| MS.gene057081 | MS.gene08322 | 0.80143 | 9.04E-49 | -1.69E-46 |
| MS.gene05726 | MS.gene08322 | 0.847971 | 8.25E-60 | -1.69E-46 |
| MS.gene057658 | MS.gene08322 | -0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene08322 | -0.834039 | 3.77E-56 | -1.69E-46 |
| MS.gene058334 | MS.gene08322 | 0.823723 | 1.19E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene08322 | -0.857706 | 1.36E-62 | -1.69E-46 |
| MS.gene058544 | MS.gene08322 | -0.857185 | 1.94E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene08322 | -0.808908 | 2.46E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene08322 | -0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene08322 | -0.843216 | 1.61E-58 | -1.69E-46 |
| MS.gene059103 | MS.gene08322 | 0.856076 | 4.11E-62 | -1.69E-46 |
| MS.gene05914 | MS.gene08322 | -0.811702 | 6.13E-51 | -1.69E-46 |
| MS.gene059303 | MS.gene08322 | -0.810622 | 1.05E-50 | -1.69E-46 |
| MS.gene059480 | MS.gene08322 | 0.865802 | 4.53E-65 | -1.69E-46 |
| MS.gene05960 | MS.gene08322 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene08322 | -0.814674 | 1.37E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene08322 | -0.815556 | 8.70E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene08322 | -0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene08322 | -0.8144 | 1.57E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene08322 | -0.83247 | 9.28E-56 | -1.69E-46 |
| MS.gene060187 | MS.gene08322 | 0.83147 | 1.64E-55 | -1.69E-46 |
| MS.gene06027 | MS.gene08322 | -0.828656 | 7.96E-55 | -1.69E-46 |
| MS.gene060358 | MS.gene08322 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene08322 | 0.825191 | 5.36E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene08322 | -0.811819 | 5.78E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene08322 | -0.816617 | 5.04E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene08322 | -0.869636 | 2.67E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene08322 | -0.836501 | 9.02E-57 | -1.69E-46 |
| MS.gene061044 | MS.gene08322 | 0.82592 | 3.60E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08322.t1 | AT1G23170 | 60.109 | 549 | 201 | 7 | 17 | 549 | 15 | 561 | 0.0 | 628 |
| MS.gene08322.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08322.t1 | AT1G70770 | 60.886 | 542 | 198 | 6 | 19 | 549 | 14 | 552 | 0.0 | 610 |
| MS.gene08322.t1 | AT1G23170 | 55.191 | 549 | 182 | 8 | 17 | 549 | 15 | 515 | 0.0 | 541 |
| MS.gene08322.t1 | AT3G11880 | 48.571 | 455 | 198 | 13 | 111 | 549 | 3 | 437 | 1.57e-125 | 377 |
| MS.gene08322.t1 | AT3G11880 | 50.000 | 432 | 187 | 12 | 134 | 549 | 3 | 421 | 2.42e-124 | 374 |
| MS.gene08322.t1 | AT3G11880 | 50.729 | 343 | 141 | 9 | 111 | 442 | 3 | 328 | 1.92e-99 | 306 |
| MS.gene08322.t1 | AT3G11880 | 48.000 | 300 | 128 | 9 | 111 | 399 | 3 | 285 | 7.65e-75 | 241 |
Find 158 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTCTGCTTTGGTCTT+TGG | 0.139887 | 4.1:+16710626 | MS.gene08322:CDS |
| TCTCAGTTGGTTTGTATTCT+TGG | 0.158367 | 4.1:+16712075 | MS.gene08322:CDS |
| ATGCGGTTTGCGGATTATTT+TGG | 0.187926 | 4.1:+16709500 | MS.gene08322:CDS |
| CTACCCCAACATGGAATCTT+TGG | 0.234838 | 4.1:+16713390 | MS.gene08322:CDS |
| CCCTAAAGCACGGGCTGTTT+TGG | 0.242352 | 4.1:+16712279 | MS.gene08322:CDS |
| CTCTCTCAGAATGGGATATA+TGG | 0.269677 | 4.1:-16712511 | None:intergenic |
| CCAAAACAGCCCGTGCTTTA+GGG | 0.272787 | 4.1:-16712279 | None:intergenic |
| TTCCTTGGGTGAAATTGTTC+AGG | 0.284035 | 4.1:+16709555 | MS.gene08322:CDS |
| CACTTAGTTCCTTTCTGCTT+TGG | 0.285709 | 4.1:+16710619 | MS.gene08322:CDS |
| ACCAAAACAGCCCGTGCTTT+AGG | 0.295717 | 4.1:-16712280 | None:intergenic |
| TGTTTCATTGCTTTACTTCC+AGG | 0.297609 | 4.1:-16712552 | None:intergenic |
| AACCCTTGGTCACAGTTTGC+TGG | 0.323214 | 4.1:-16710674 | None:intergenic |
| CAACCCGCAATCCAGGGATT+TGG | 0.335667 | 4.1:+16712136 | MS.gene08322:CDS |
| TCAGCGCTGCTCAGTTTCCT+TGG | 0.337666 | 4.1:+16709540 | MS.gene08322:CDS |
| ACCTTAGGTTTCTTCACCTT+TGG | 0.337808 | 4.1:-16709252 | None:intergenic |
| GTGGCTCTTGGCGGTTCTCC+TGG | 0.348034 | 4.1:+16712534 | MS.gene08322:CDS |
| AAATCCAAAGATTCCATGTT+GGG | 0.364480 | 4.1:-16713394 | None:intergenic |
| GTTGAAGGTGAGTTTGTTAC+CGG | 0.374708 | 4.1:-16709010 | None:intergenic |
| AAACCAAATCCCTGGATTGC+GGG | 0.379701 | 4.1:-16712139 | None:intergenic |
| TGTGACCAAGGGTTCCAAAA+AGG | 0.391826 | 4.1:+16710683 | MS.gene08322:CDS |
| GCTTGTAGCATTCAGTGCTT+TGG | 0.393155 | 4.1:-16712777 | None:intergenic |
| TATTCTCGAATGCTCAGAAC+TGG | 0.397435 | 4.1:-16713444 | None:intergenic |
| AGCAGCGTCGTTTCCGTTGA+AGG | 0.401884 | 4.1:-16709025 | None:intergenic |
| TAATAAGAGCATCAGGCTTT+CGG | 0.411863 | 4.1:-16711817 | None:intergenic |
| GCTTCCGCCACCGTCACCTT+AGG | 0.420485 | 4.1:-16709267 | None:intergenic |
| GATCGCTGCTTCGATCTAAC+TGG | 0.421839 | 4.1:-16709135 | None:intergenic |
| CAGCGCTGCTCAGTTTCCTT+GGG | 0.422296 | 4.1:+16709541 | MS.gene08322:CDS |
| GGGAGATCCTAAAGAACTTT+AGG | 0.423156 | 4.1:+16713090 | MS.gene08322:CDS |
| CCTATAGTGGTTAGCAAAAG+TGG | 0.424512 | 4.1:+16712113 | MS.gene08322:CDS |
| GTGGGAGATGGATCCGGAGG+GGG | 0.426014 | 4.1:-16708884 | None:intergenic |
| GAAGATTGATGCAGCTGATC+TGG | 0.427235 | 4.1:+16709296 | MS.gene08322:CDS |
| AAAGTGGCAACCCGCAATCC+AGG | 0.430699 | 4.1:+16712129 | MS.gene08322:CDS |
| CAAGTCGCTTGAGTTGCATT+CGG | 0.432376 | 4.1:+16709050 | MS.gene08322:CDS |
| TACTGTATTGCCCAAATTGA+GGG | 0.436105 | 4.1:+16711838 | MS.gene08322:CDS |
| CCTAAAGAACTTTAGGCAAA+AGG | 0.442468 | 4.1:+16713097 | MS.gene08322:CDS |
| ATCTCCCTGAGTGGCTCATA+AGG | 0.444202 | 4.1:-16713074 | None:intergenic |
| GATGATGATGTGGATCGGTC+AGG | 0.450841 | 4.1:+16709189 | MS.gene08322:CDS |
| TGAGGCGAGGACTGCGGCGG+AGG | 0.454431 | 4.1:+16709095 | MS.gene08322:CDS |
| GGCGGTGTGGGAGATGGATC+CGG | 0.460314 | 4.1:-16708890 | None:intergenic |
| ACAAGTAACTTCAAAATCTC+AGG | 0.462196 | 4.1:+16710713 | MS.gene08322:CDS |
| CTCACGGCGCCGATCACGGC+TGG | 0.463140 | 4.1:+16708929 | MS.gene08322:CDS |
| GACCTTCTGCCAGCCGTGAT+CGG | 0.468288 | 4.1:-16708938 | None:intergenic |
| GGTGAGTTTGTTACCGGTAC+CGG | 0.468566 | 4.1:-16709004 | None:intergenic |
| GCACTGAATGCTACAAGCTA+TGG | 0.469110 | 4.1:+16712782 | MS.gene08322:CDS |
| CTGAGAGAGGTGGCTCTTGG+CGG | 0.469550 | 4.1:+16712525 | MS.gene08322:CDS |
| ATTGATTCCTCCTCCAGCAT+TGG | 0.470236 | 4.1:+16712330 | MS.gene08322:CDS |
| TCAGTAGGAGATCTCTCAGT+TGG | 0.471593 | 4.1:+16712062 | MS.gene08322:CDS |
| GGACAGTATTCTTACTGACT+TGG | 0.473081 | 4.1:+16710647 | MS.gene08322:CDS |
| TGTGGGAGATGGATCCGGAG+GGG | 0.474914 | 4.1:-16708885 | None:intergenic |
| GTGGATCGGTCAGGGGAGAA+TGG | 0.475403 | 4.1:+16709198 | MS.gene08322:CDS |
| ACCTTTACTCTAGCTGAAGA+TGG | 0.476260 | 4.1:-16712379 | None:intergenic |
| AATACAGTAATAAGAGCATC+AGG | 0.478128 | 4.1:-16711824 | None:intergenic |
| CGCTTGCTACAATGTTCTCC+TGG | 0.480089 | 4.1:-16712995 | None:intergenic |
| CGGATCAAAGTTTCCAATGC+TGG | 0.481600 | 4.1:-16712343 | None:intergenic |
| GTTAACGGTGCTGTAAGAAA+AGG | 0.482437 | 4.1:+16712301 | MS.gene08322:CDS |
| ACCGTGCTTGCTGTGGCTGT+TGG | 0.484447 | 4.1:+16713355 | MS.gene08322:CDS |
| TTACTGTATTGCCCAAATTG+AGG | 0.486297 | 4.1:+16711837 | MS.gene08322:CDS |
| AAGAGCCACCTCTCTCAGAA+TGG | 0.486370 | 4.1:-16712520 | None:intergenic |
| ATTCTGAGAGAGGTGGCTCT+TGG | 0.487210 | 4.1:+16712522 | MS.gene08322:CDS |
| GGAAGAGTTTCACGAGGCCA+TGG | 0.488867 | 4.1:+16713310 | MS.gene08322:CDS |
| TAGCCAGCAAACTGTGACCA+AGG | 0.494511 | 4.1:+16710671 | MS.gene08322:CDS |
| GCGGAATCTCCTACCTATAG+TGG | 0.495190 | 4.1:+16712100 | MS.gene08322:CDS |
| AGATTCGGCGGTGTGGGAGA+TGG | 0.497613 | 4.1:-16708896 | None:intergenic |
| GCTGCTTCTTTCGATACTCC+AGG | 0.497984 | 4.1:-16712730 | None:intergenic |
| TGAGCAGGAGAAAGTTTACC+AGG | 0.499942 | 4.1:+16712977 | MS.gene08322:intron |
| GCAACCATCCATACAATCAC+TGG | 0.500036 | 4.1:-16711893 | None:intergenic |
| TCCTTGGGTGAAATTGTTCA+GGG | 0.500312 | 4.1:+16709556 | MS.gene08322:CDS |
| AAGCAGCTTCTATTGCACTT+TGG | 0.504270 | 4.1:+16712746 | MS.gene08322:CDS |
| AAGGAAGCTAACGGCGTCGC+CGG | 0.508318 | 4.1:+16708985 | MS.gene08322:CDS |
| GATACAGATGATGCGGTTTG+CGG | 0.509299 | 4.1:+16709490 | MS.gene08322:CDS |
| GTCTCAGATATGTGAGAAAG+TGG | 0.510412 | 4.1:-16710549 | None:intergenic |
| AGAGCCACCTCTCTCAGAAT+GGG | 0.511188 | 4.1:-16712519 | None:intergenic |
| CTTCTTATGCTTCTTCGCGT+AGG | 0.511297 | 4.1:-16708962 | None:intergenic |
| AATTTCGCTATCATAGCAGC+AGG | 0.515210 | 4.1:+16712594 | MS.gene08322:CDS |
| GGTGTGGGAGATGGATCCGG+AGG | 0.515556 | 4.1:-16708887 | None:intergenic |
| TGTCTCCTTATGAGCCACTC+AGG | 0.516916 | 4.1:+16713069 | MS.gene08322:CDS |
| AAATATTGCAAGATAATCTC+AGG | 0.519787 | 4.1:+16713289 | MS.gene08322:CDS |
| CCTTTACTCTAGCTGAAGAT+GGG | 0.524391 | 4.1:-16712378 | None:intergenic |
| GATTGTATGGATGGTTGCTC+AGG | 0.525541 | 4.1:+16711898 | MS.gene08322:CDS |
| GGAGTTAGATTCGGCGGTGT+GGG | 0.527264 | 4.1:-16708902 | None:intergenic |
| CAGAAAGGAACTAAGTGCCT+CGG | 0.527844 | 4.1:-16710613 | None:intergenic |
| ACCAACAGCCACAGCAAGCA+CGG | 0.529034 | 4.1:-16713356 | None:intergenic |
| CGCGAAGAAGCATAAGAAGA+AGG | 0.529676 | 4.1:+16708966 | MS.gene08322:CDS |
| TATACAAGACATCAGTTGAC+TGG | 0.531046 | 4.1:+16710574 | MS.gene08322:CDS |
| ATGATGATGTGGATCGGTCA+GGG | 0.531980 | 4.1:+16709190 | MS.gene08322:CDS |
| AAAAGCTGAAGAGGTGAAGA+AGG | 0.533059 | 4.1:+16709221 | MS.gene08322:CDS |
| AAGCTGCAAAACCAAATCCC+TGG | 0.534627 | 4.1:-16712147 | None:intergenic |
| GTGTGGGAGATGGATCCGGA+GGG | 0.536705 | 4.1:-16708886 | None:intergenic |
| AGAAAGGAACTAAGTGCCTC+GGG | 0.536775 | 4.1:-16710612 | None:intergenic |
| GCTAACGGCGTCGCCGGTAC+CGG | 0.537790 | 4.1:+16708991 | MS.gene08322:CDS |
| CGCCGATCACGGCTGGCAGA+AGG | 0.538888 | 4.1:+16708936 | MS.gene08322:CDS |
| GTGAGATGAGGAGTTAGATT+CGG | 0.541523 | 4.1:-16708911 | None:intergenic |
| GACAGTATTCTTACTGACTT+GGG | 0.542880 | 4.1:+16710648 | MS.gene08322:CDS |
| TCATCTCACGGCGCCGATCA+CGG | 0.544498 | 4.1:+16708925 | MS.gene08322:CDS |
| CCCATCTTCAGCTAGAGTAA+AGG | 0.544992 | 4.1:+16712378 | MS.gene08322:CDS |
| TGCATTCGGAGGATCGGAGA+AGG | 0.547304 | 4.1:+16709064 | MS.gene08322:CDS |
| AATATTTGTTGCTTTAGCGT+TGG | 0.547458 | 4.1:+16711787 | MS.gene08322:CDS |
| TTGGTTTGTATTCTTGGTCG+CGG | 0.548699 | 4.1:+16712081 | MS.gene08322:CDS |
| GGTAACAAACTCACCTTCAA+CGG | 0.548782 | 4.1:+16709012 | MS.gene08322:CDS |
| AAAGTTTCCAATGCTGGAGG+AGG | 0.556105 | 4.1:-16712337 | None:intergenic |
| TTTGTCCACCCCTAAAGCAC+GGG | 0.556433 | 4.1:+16712270 | MS.gene08322:CDS |
| GACCTTTACCGTGCTTGCTG+TGG | 0.557982 | 4.1:+16713348 | MS.gene08322:CDS |
| GAAATCCAAAGATTCCATGT+TGG | 0.561519 | 4.1:-16713395 | None:intergenic |
| ACAGGCTACAGAAAGATTTG+AGG | 0.563848 | 4.1:+16712488 | MS.gene08322:intron |
| TTGAGTTGCATTCGGAGGAT+CGG | 0.568593 | 4.1:+16709058 | MS.gene08322:CDS |
| CACTGAATGCTACAAGCTAT+GGG | 0.569907 | 4.1:+16712783 | MS.gene08322:CDS |
| CAAAACAGCCCGTGCTTTAG+GGG | 0.574054 | 4.1:-16712278 | None:intergenic |
| GGCATCGTTTGAGCAGAATG+AGG | 0.575026 | 4.1:+16709466 | MS.gene08322:intron |
| AAAACCAAATCCCTGGATTG+CGG | 0.578328 | 4.1:-16712140 | None:intergenic |
| AGCCACAGCAAGCACGGTAA+AGG | 0.579436 | 4.1:-16713350 | None:intergenic |
| GCTATCATAGCAGCAGGAGA+AGG | 0.581836 | 4.1:+16712600 | MS.gene08322:CDS |
| ACTCCCAGTGATTGTATGGA+TGG | 0.582697 | 4.1:+16711889 | MS.gene08322:CDS |
| GAAACCTAAGGTGACGGTGG+CGG | 0.583163 | 4.1:+16709263 | MS.gene08322:CDS |
| ATCTATGTGCAGGCTTCAGT+AGG | 0.583240 | 4.1:+16712047 | MS.gene08322:intron |
| AGGAGTTAGATTCGGCGGTG+TGG | 0.588248 | 4.1:-16708903 | None:intergenic |
| GTCCAAAGACCAAAGCAGAA+AGG | 0.592435 | 4.1:-16710628 | None:intergenic |
| GAAGAGTTTCACGAGGCCAT+GGG | 0.594706 | 4.1:+16713311 | MS.gene08322:CDS |
| GGAGAATGGAAAAGCTGAAG+AGG | 0.595415 | 4.1:+16709212 | MS.gene08322:CDS |
| AACAGCCCGTGCTTTAGGGG+TGG | 0.598573 | 4.1:-16712275 | None:intergenic |
| GTCGCTTGAGTTGCATTCGG+AGG | 0.598827 | 4.1:+16709053 | MS.gene08322:CDS |
| CATATATCCCATTCTGAGAG+AGG | 0.602504 | 4.1:+16712512 | MS.gene08322:CDS |
| ACATCAACAATCTTAGCCAC+AGG | 0.603144 | 4.1:-16709584 | None:intergenic |
| CAACCATCCATACAATCACT+GGG | 0.608838 | 4.1:-16711892 | None:intergenic |
| GAAGGAAAATTCTTGAGGCG+AGG | 0.609341 | 4.1:+16709082 | MS.gene08322:CDS |
| AAGTGGCAACCCGCAATCCA+GGG | 0.609912 | 4.1:+16712130 | MS.gene08322:CDS |
| GTCTCCTTATGAGCCACTCA+GGG | 0.610196 | 4.1:+16713070 | MS.gene08322:CDS |
| GTGATCGGCGCCGTGAGATG+AGG | 0.611262 | 4.1:-16708923 | None:intergenic |
| GCGGAGGCTGAATTTGATGA+TGG | 0.617872 | 4.1:+16709111 | MS.gene08322:CDS |
| TCCCTGAACAATTTCACCCA+AGG | 0.618599 | 4.1:-16709557 | None:intergenic |
| CGATGAAGACGATGATGATG+TGG | 0.624368 | 4.1:+16709179 | MS.gene08322:CDS |
| ATTCTCGAATGCTCAGAACT+GGG | 0.627893 | 4.1:-16713443 | None:intergenic |
| TCTTGAGGCGAGGACTGCGG+CGG | 0.630323 | 4.1:+16709092 | MS.gene08322:CDS |
| CTTTACTCTAGCTGAAGATG+GGG | 0.634564 | 4.1:-16712377 | None:intergenic |
| TGATGATGTGGATCGGTCAG+GGG | 0.634863 | 4.1:+16709191 | MS.gene08322:CDS |
| TTTACTCTAGCTGAAGATGG+GGG | 0.635009 | 4.1:-16712376 | None:intergenic |
| CAGTTGACTGGATCAATCGT+CGG | 0.638176 | 4.1:+16710586 | MS.gene08322:CDS |
| GAATCTAACTCCTCATCTCA+CGG | 0.640221 | 4.1:+16708913 | MS.gene08322:CDS |
| ACCAAAGGTGAAGAAACCTA+AGG | 0.640238 | 4.1:+16709251 | MS.gene08322:CDS |
| AATCCAAAGATTCCATGTTG+GGG | 0.642323 | 4.1:-16713393 | None:intergenic |
| ATCAAAGTTTCCAATGCTGG+AGG | 0.642389 | 4.1:-16712340 | None:intergenic |
| GATCAATCGTCGGTCTCCCG+AGG | 0.644658 | 4.1:+16710596 | MS.gene08322:CDS |
| TTCTTTAGGATCTCCCTGAG+TGG | 0.645060 | 4.1:-16713083 | None:intergenic |
| AATTCTTGAGGCGAGGACTG+CGG | 0.646090 | 4.1:+16709089 | MS.gene08322:CDS |
| CATAAGAAGAAGGAAGCTAA+CGG | 0.647003 | 4.1:+16708976 | MS.gene08322:CDS |
| AGCCAGCAAACTGTGACCAA+GGG | 0.647478 | 4.1:+16710672 | MS.gene08322:CDS |
| TGTATTGCCCAAATTGAGGG+AGG | 0.648811 | 4.1:+16711841 | MS.gene08322:CDS |
| GAAGAAGGTTAAGAAACCAA+AGG | 0.649224 | 4.1:+16709236 | MS.gene08322:CDS |
| TCGGAGAAGGAAAATTCTTG+AGG | 0.649487 | 4.1:+16709077 | MS.gene08322:CDS |
| ATGAGGAGATACAGATGATG+CGG | 0.649967 | 4.1:+16709483 | MS.gene08322:CDS |
| ATATCCCATTCTGAGAGAGG+TGG | 0.657382 | 4.1:+16712515 | MS.gene08322:CDS |
| GGTGAAGAAACCTAAGGTGA+CGG | 0.658046 | 4.1:+16709257 | MS.gene08322:CDS |
| TTACTCTAGCTGAAGATGGG+GGG | 0.666207 | 4.1:-16712375 | None:intergenic |
| ATTGTTCAGGGAGTCACCTG+TGG | 0.666973 | 4.1:+16709568 | MS.gene08322:CDS |
| GAATGAGAAAGCATTGACAA+CGG | 0.668814 | 4.1:+16713225 | MS.gene08322:intron |
| AAGACGATGATGATGTGGAT+CGG | 0.676350 | 4.1:+16709184 | MS.gene08322:CDS |
| AGATGAGGAGTTAGATTCGG+CGG | 0.685801 | 4.1:-16708908 | None:intergenic |
| GAAGAAACCTAAGGTGACGG+TGG | 0.705385 | 4.1:+16709260 | MS.gene08322:CDS |
| ATCTCAGGAAGAGTTTCACG+AGG | 0.743689 | 4.1:+16713304 | MS.gene08322:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGATTATTATTATTTAGT+GGG | + | chr4.1:16709732-16709751 | MS.gene08322:intron | 15.0% |
| !! | GTGTTAATTAAACATTATTT+GGG | - | chr4.1:16710966-16710985 | None:intergenic | 15.0% |
| !! | TATATAAGTTCACATTATAA+CGG | - | chr4.1:16710180-16710199 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAACATTATT+TGG | - | chr4.1:16710967-16710986 | None:intergenic | 15.0% |
| !! | TTAATGTTGAGATTTAATTA+CGG | + | chr4.1:16709360-16709379 | MS.gene08322:intron | 15.0% |
| !!! | ATATTATTTTACCAACTATT+CGG | - | chr4.1:16711410-16711429 | None:intergenic | 15.0% |
| !!! | GAACTTATATAGTTTTTTTA+AGG | + | chr4.1:16710189-16710208 | MS.gene08322:intron | 15.0% |
| !!! | TATATAGTTTTTTTAAGGTT+TGG | + | chr4.1:16710194-16710213 | MS.gene08322:intron | 15.0% |
| !!! | TGAATATGAATATGATTTTA+GGG | - | chr4.1:16711666-16711685 | None:intergenic | 15.0% |
| !!! | TTGAATATGAATATGATTTT+AGG | - | chr4.1:16711667-16711686 | None:intergenic | 15.0% |
| !! | AAGCAAATAACAAAACATAA+TGG | - | chr4.1:16712243-16712262 | None:intergenic | 20.0% |
| !! | AAGTAAAATTCACATAAACA+GGG | - | chr4.1:16711590-16711609 | None:intergenic | 20.0% |
| !! | AATAAGTATATAGAGTTTCA+TGG | - | chr4.1:16712935-16712954 | None:intergenic | 20.0% |
| !! | AATATTAAAAATCTATGTGC+AGG | + | chr4.1:16712037-16712056 | MS.gene08322:intron | 20.0% |
| !! | AGAAATCAAACAATAAAATC+AGG | - | chr4.1:16712633-16712652 | None:intergenic | 20.0% |
| !! | ATAGAGCTAAATAATATGTT+TGG | + | chr4.1:16709948-16709967 | MS.gene08322:intron | 20.0% |
| !! | ATCAATATCAAGACAAATAA+AGG | + | chr4.1:16711135-16711154 | MS.gene08322:intron | 20.0% |
| !! | ATCATACTTATATCTTAACT+AGG | + | chr4.1:16709877-16709896 | MS.gene08322:intron | 20.0% |
| !! | CCTGATAAAACATAAATATT+CGG | - | chr4.1:16710527-16710546 | None:intergenic | 20.0% |
| !! | GACTTGTAAAAAAAACTTAT+TGG | + | chr4.1:16711616-16711635 | MS.gene08322:intron | 20.0% |
| !! | TAAGTAAAATTCACATAAAC+AGG | - | chr4.1:16711591-16711610 | None:intergenic | 20.0% |
| !! | TATTTGCTCTTATTCTTTAT+TGG | + | chr4.1:16712951-16712970 | MS.gene08322:intron | 20.0% |
| !! | TCATACTTATATTCTTAACT+AGG | + | chr4.1:16709920-16709939 | MS.gene08322:intron | 20.0% |
| !!! | AACATATTCTTCATTTTGAA+AGG | - | chr4.1:16711709-16711728 | None:intergenic | 20.0% |
| !!! | CACTGATTATTATTATTTAG+TGG | + | chr4.1:16709731-16709750 | MS.gene08322:intron | 20.0% |
| !!! | GTTATTATTGGATTTTGTTT+AGG | - | chr4.1:16710813-16710832 | None:intergenic | 20.0% |
| !!! | GTTTTTTTGTTCACTATTAA+GGG | + | chr4.1:16710878-16710897 | MS.gene08322:intron | 20.0% |
| !!! | TATTTTAACTTGGTAGAAAA+AGG | - | chr4.1:16710258-16710277 | None:intergenic | 20.0% |
| !!! | TTTATTTTGATGACAAATCA+TGG | + | chr4.1:16709620-16709639 | MS.gene08322:intron | 20.0% |
| !!! | TTTTTGTAATCTTTTTTACG+AGG | + | chr4.1:16712843-16712862 | MS.gene08322:intron | 20.0% |
| ! | AAATATTGCAAGATAATCTC+AGG | + | chr4.1:16713289-16713308 | MS.gene08322:CDS | 25.0% |
| ! | AAATGAAGATCCAATAGAAA+AGG | - | chr4.1:16711082-16711101 | None:intergenic | 25.0% |
| ! | AATGAAGATCCAATAGAAAA+GGG | - | chr4.1:16711081-16711100 | None:intergenic | 25.0% |
| ! | ACAAATCTTGTAACAGAAAT+TGG | - | chr4.1:16709789-16709808 | None:intergenic | 25.0% |
| ! | CAAATCTTGTAACAGAAATT+GGG | - | chr4.1:16709788-16709807 | None:intergenic | 25.0% |
| ! | TATAAAACATTTCAGTACTG+TGG | - | chr4.1:16710339-16710358 | None:intergenic | 25.0% |
| ! | TTCAACTGTTATATATGTTC+TGG | + | chr4.1:16709693-16709712 | MS.gene08322:intron | 25.0% |
| !! | CCGAATATTTATGTTTTATC+AGG | + | chr4.1:16710524-16710543 | MS.gene08322:intron | 25.0% |
| !! | GAAAAGTATGTAAATGTTTC+TGG | + | chr4.1:16712173-16712192 | MS.gene08322:intron | 25.0% |
| !! | GATGTTGTTTATCATAATCT+TGG | + | chr4.1:16710467-16710486 | MS.gene08322:intron | 25.0% |
| !! | TATATATGTTCTGGTGTTTT+TGG | + | chr4.1:16709702-16709721 | MS.gene08322:intron | 25.0% |
| !! | TCAATATGTTGCTATTATAC+AGG | + | chr4.1:16712470-16712489 | MS.gene08322:intron | 25.0% |
| !!! | ATGGACTGATTTAACTATTT+TGG | + | chr4.1:16713197-16713216 | MS.gene08322:intron | 25.0% |
| !!! | GACACACTAATATTTTAACT+TGG | - | chr4.1:16710268-16710287 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTGTTCACTATTA+AGG | + | chr4.1:16710877-16710896 | MS.gene08322:intron | 25.0% |
| !!! | GTTTTTTTTACCCTTTCAAA+AGG | + | chr4.1:16711975-16711994 | MS.gene08322:intron | 25.0% |
| !!! | TATGTTTGGAGCTTTTAATT+TGG | + | chr4.1:16709962-16709981 | MS.gene08322:intron | 25.0% |
| !!! | TGCATGTTTGTTTTTGAATT+AGG | + | chr4.1:16709445-16709464 | MS.gene08322:intron | 25.0% |
| !!! | TTGTACTTATCCTTTTGAAA+GGG | - | chr4.1:16711988-16712007 | None:intergenic | 25.0% |
| !!! | TTTAATTACGGTTTTGTGAT+TGG | + | chr4.1:16709372-16709391 | MS.gene08322:intron | 25.0% |
| AAATCCAAAGATTCCATGTT+GGG | - | chr4.1:16713397-16713416 | None:intergenic | 30.0% | |
| ACAAAACATAATGGTGAAGA+TGG | - | chr4.1:16712234-16712253 | None:intergenic | 30.0% | |
| ACAAATAAAGGAACTTCTGT+AGG | + | chr4.1:16711147-16711166 | MS.gene08322:intron | 30.0% | |
| ACAAGTAACTTCAAAATCTC+AGG | + | chr4.1:16710713-16710732 | MS.gene08322:CDS | 30.0% | |
| ACATAAACCAAACTAAGCTA+AGG | + | chr4.1:16710844-16710863 | MS.gene08322:intron | 30.0% | |
| ACGAATATTCTGATATTTCC+AGG | - | chr4.1:16711213-16711232 | None:intergenic | 30.0% | |
| AGAAAGAAACGTGTTAAACT+TGG | + | chr4.1:16710003-16710022 | MS.gene08322:intron | 30.0% | |
| AGATGCCATATCAACTAAAT+GGG | + | chr4.1:16711929-16711948 | MS.gene08322:intron | 30.0% | |
| AGGGAGGATAAAAAATATCA+AGG | + | chr4.1:16711857-16711876 | MS.gene08322:CDS | 30.0% | |
| ATATCTTAACTAGGAACTCA+GGG | + | chr4.1:16709886-16709905 | MS.gene08322:intron | 30.0% | |
| ATTCTTTATTGGATATGAGC+AGG | + | chr4.1:16712962-16712981 | MS.gene08322:intron | 30.0% | |
| CAAAATACCTTCTAAACACT+TGG | - | chr4.1:16712680-16712699 | None:intergenic | 30.0% | |
| CCAAATCAAATTTAACCTAC+TGG | - | chr4.1:16711542-16711561 | None:intergenic | 30.0% | |
| CCAGTAGGTTAAATTTGATT+TGG | + | chr4.1:16711539-16711558 | MS.gene08322:intron | 30.0% | |
| CTCAATCTACATCTAAATCA+GGG | - | chr4.1:16711740-16711759 | None:intergenic | 30.0% | |
| CTCTTAAAGTTGAAAGAACT+AGG | + | chr4.1:16711471-16711490 | MS.gene08322:intron | 30.0% | |
| GACTTATAAAAACTGCTACA+TGG | - | chr4.1:16710035-16710054 | None:intergenic | 30.0% | |
| TAGATGCCATATCAACTAAA+TGG | + | chr4.1:16711928-16711947 | MS.gene08322:intron | 30.0% | |
| TATATCTTAACTAGGAACTC+AGG | + | chr4.1:16709885-16709904 | MS.gene08322:intron | 30.0% | |
| TCAAATTTAACCTACTGGAA+TGG | - | chr4.1:16711537-16711556 | None:intergenic | 30.0% | |
| TCTCAATCTACATCTAAATC+AGG | - | chr4.1:16711741-16711760 | None:intergenic | 30.0% | |
| TTGGGACAAGATTATTTACT+AGG | - | chr4.1:16710948-16710967 | None:intergenic | 30.0% | |
| ! | CTAGTTCTTTCAACTTTAAG+AGG | - | chr4.1:16711473-16711492 | None:intergenic | 30.0% |
| ! | GACTTTTCTCGTTGATATAT+CGG | + | chr4.1:16709320-16709339 | MS.gene08322:CDS | 30.0% |
| ! | GTTGTACTTATCCTTTTGAA+AGG | - | chr4.1:16711989-16712008 | None:intergenic | 30.0% |
| ! | TAGCTTAGTTTGGTTTATGT+TGG | - | chr4.1:16710844-16710863 | None:intergenic | 30.0% |
| ! | TTTTTATCCTCCCTCAATTT+GGG | - | chr4.1:16711851-16711870 | None:intergenic | 30.0% |
| !! | AATACAGTAATAAGAGCATC+AGG | - | chr4.1:16711827-16711846 | None:intergenic | 30.0% |
| !! | AATATTTGTTGCTTTAGCGT+TGG | + | chr4.1:16711787-16711806 | MS.gene08322:CDS | 30.0% |
| !! | ATATGATTTTAGGGACCAAA+AGG | - | chr4.1:16711657-16711676 | None:intergenic | 30.0% |
| !! | TTGAAGTATTTTTCCCCTTT+TGG | + | chr4.1:16711241-16711260 | MS.gene08322:intron | 30.0% |
| !!! | ATTTTTTTTCCAGACAATCC+TGG | + | chr4.1:16712712-16712731 | MS.gene08322:intron | 30.0% |
| !!! | TTTTTTATCCTCCCTCAATT+TGG | - | chr4.1:16711852-16711871 | None:intergenic | 30.0% |
| AAAAACTCCCAGTGATTGTA+TGG | + | chr4.1:16711885-16711904 | MS.gene08322:CDS | 35.0% | |
| AACATTTCAGTACTGTGGTA+TGG | - | chr4.1:16710334-16710353 | None:intergenic | 35.0% | |
| AAGACTTATCTTACTAGGTC+CGG | - | chr4.1:16711292-16711311 | None:intergenic | 35.0% | |
| AATCAAATGACCCTCCAAAA+GGG | - | chr4.1:16711258-16711277 | None:intergenic | 35.0% | |
| AATCCAAAGATTCCATGTTG+GGG | - | chr4.1:16713396-16713415 | None:intergenic | 35.0% | |
| ACAATGGCAAACAAAGAACA+TGG | - | chr4.1:16711366-16711385 | None:intergenic | 35.0% | |
| ACATTTCAGTACTGTGGTAT+GGG | - | chr4.1:16710333-16710352 | None:intergenic | 35.0% | |
| AGATGAACCAAGTGTTTAGA+AGG | + | chr4.1:16712670-16712689 | MS.gene08322:intron | 35.0% | |
| AGTTAAATCAGTCCATGTCA+AGG | - | chr4.1:16713193-16713212 | None:intergenic | 35.0% | |
| ATATCCTGAATCACAAAGAC+AGG | + | chr4.1:16710922-16710941 | MS.gene08322:intron | 35.0% | |
| ATTAAGCATTAGCGAGATGA+AGG | - | chr4.1:16712020-16712039 | None:intergenic | 35.0% | |
| ATTTGATTCATGTTGCCAAC+CGG | + | chr4.1:16711270-16711289 | MS.gene08322:intron | 35.0% | |
| CATAAGAAGAAGGAAGCTAA+CGG | + | chr4.1:16708976-16708995 | MS.gene08322:CDS | 35.0% | |
| CCACAATGGTGTAAAATTTC+TGG | + | chr4.1:16711009-16711028 | MS.gene08322:intron | 35.0% | |
| CCAGCTTCAAATGAAATTGT+TGG | + | chr4.1:16710113-16710132 | MS.gene08322:intron | 35.0% | |
| CCTAAAGAACTTTAGGCAAA+AGG | + | chr4.1:16713097-16713116 | MS.gene08322:CDS | 35.0% | |
| CTGAATAATGAAAGTCAAGC+AGG | - | chr4.1:16711435-16711454 | None:intergenic | 35.0% | |
| GAAATCCAAAGATTCCATGT+TGG | - | chr4.1:16713398-16713417 | None:intergenic | 35.0% | |
| GAAGAAGGTTAAGAAACCAA+AGG | + | chr4.1:16709236-16709255 | MS.gene08322:CDS | 35.0% | |
| GTTAAATCAGTCCATGTCAA+GGG | - | chr4.1:16713192-16713211 | None:intergenic | 35.0% | |
| TACTGTATTGCCCAAATTGA+GGG | + | chr4.1:16711838-16711857 | MS.gene08322:CDS | 35.0% | |
| TAGCAAAAGTCATTGATCCT+CGG | + | chr4.1:16710077-16710096 | MS.gene08322:intron | 35.0% | |
| TATACAAGACATCAGTTGAC+TGG | + | chr4.1:16710574-16710593 | MS.gene08322:CDS | 35.0% | |
| TATCATAAACCCTCATCGTA+TGG | - | chr4.1:16709853-16709872 | None:intergenic | 35.0% | |
| TATCGGTAGGGTTATTGAAT+TGG | + | chr4.1:16709337-16709356 | MS.gene08322:intron | 35.0% | |
| TGAAAAAGCTTTCTGATGAC+TGG | + | chr4.1:16713027-16713046 | MS.gene08322:CDS | 35.0% | |
| TGCTACTCAAATTTGCAGAA+AGG | - | chr4.1:16710062-16710081 | None:intergenic | 35.0% | |
| TGTCTTTGTGATTCAGGATA+TGG | - | chr4.1:16710923-16710942 | None:intergenic | 35.0% | |
| TGTTGTTATGTGAATTGTGC+TGG | + | chr4.1:16709658-16709677 | MS.gene08322:intron | 35.0% | |
| TGTTTCATTGCTTTACTTCC+AGG | - | chr4.1:16712555-16712574 | None:intergenic | 35.0% | |
| TTAAATCAGTCCATGTCAAG+GGG | - | chr4.1:16713191-16713210 | None:intergenic | 35.0% | |
| TTAAGCATTAGCGAGATGAA+GGG | - | chr4.1:16712019-16712038 | None:intergenic | 35.0% | |
| TTACTGTATTGCCCAAATTG+AGG | + | chr4.1:16711837-16711856 | MS.gene08322:CDS | 35.0% | |
| TTCTCGTTGATATATCGGTA+GGG | + | chr4.1:16709325-16709344 | MS.gene08322:intron | 35.0% | |
| TTTCTCGTTGATATATCGGT+AGG | + | chr4.1:16709324-16709343 | MS.gene08322:intron | 35.0% | |
| ! | AAGTATTTTTCCCCTTTTGG+AGG | + | chr4.1:16711244-16711263 | MS.gene08322:intron | 35.0% |
| ! | AGTATTTTTCCCCTTTTGGA+GGG | + | chr4.1:16711245-16711264 | MS.gene08322:intron | 35.0% |
| ! | ATGAGCCCATTTAGTTGATA+TGG | - | chr4.1:16711937-16711956 | None:intergenic | 35.0% |
| ! | ATTTTGTGACCTTTGCCTTT+TGG | + | chr4.1:16711639-16711658 | MS.gene08322:intron | 35.0% |
| ! | CAATGGTGTAAAATTTCTGG+AGG | + | chr4.1:16711012-16711031 | MS.gene08322:intron | 35.0% |
| ! | CCAACAATTTCATTTGAAGC+TGG | - | chr4.1:16710116-16710135 | None:intergenic | 35.0% |
| ! | CCAGAAATTTTACACCATTG+TGG | - | chr4.1:16711012-16711031 | None:intergenic | 35.0% |
| ! | CCTTTTGCCTAAAGTTCTTT+AGG | - | chr4.1:16713100-16713119 | None:intergenic | 35.0% |
| ! | CTGAATCTGTTTCGATGTTT+TGG | + | chr4.1:16710390-16710409 | MS.gene08322:intron | 35.0% |
| ! | CTTAGTTTGGTTTATGTTGG+TGG | - | chr4.1:16710841-16710860 | None:intergenic | 35.0% |
| ! | CTTTTCTCACCCTTTTCTAT+TGG | + | chr4.1:16711069-16711088 | MS.gene08322:intron | 35.0% |
| ! | TTTTGCTAACCACTATAGGT+AGG | - | chr4.1:16712112-16712131 | None:intergenic | 35.0% |
| !! | ATTGATTTTACATGACCTGC+AGG | + | chr4.1:16711760-16711779 | MS.gene08322:intron | 35.0% |
| !! | ATTTGATTTGGAGAGTTGCA+TGG | + | chr4.1:16711551-16711570 | MS.gene08322:intron | 35.0% |
| !! | GAATGAGAAAGCATTGACAA+CGG | + | chr4.1:16713225-16713244 | MS.gene08322:intron | 35.0% |
| !! | GACAGTATTCTTACTGACTT+GGG | + | chr4.1:16710648-16710667 | MS.gene08322:CDS | 35.0% |
| !! | TAATAAGAGCATCAGGCTTT+CGG | - | chr4.1:16711820-16711839 | None:intergenic | 35.0% |
| !! | TCTCAGTTGGTTTGTATTCT+TGG | + | chr4.1:16712075-16712094 | MS.gene08322:CDS | 35.0% |
| !!! | TATGTTCTGGTGTTTTTGGA+TGG | + | chr4.1:16709706-16709725 | MS.gene08322:intron | 35.0% |
| AAAACCAAATCCCTGGATTG+CGG | - | chr4.1:16712143-16712162 | None:intergenic | 40.0% | |
| AAAAGCTGAAGAGGTGAAGA+AGG | + | chr4.1:16709221-16709240 | MS.gene08322:CDS | 40.0% | |
| AAAGTCATTGATCCTCGGAA+AGG | + | chr4.1:16710082-16710101 | MS.gene08322:intron | 40.0% | |
| AACAGCTATGGTACGAAAAG+GGG | - | chr4.1:16712210-16712229 | None:intergenic | 40.0% | |
| AAGCAGCTTCTATTGCACTT+TGG | + | chr4.1:16712746-16712765 | MS.gene08322:CDS | 40.0% | |
| AATTTCGCTATCATAGCAGC+AGG | + | chr4.1:16712594-16712613 | MS.gene08322:CDS | 40.0% | |
| ACAGGCTACAGAAAGATTTG+AGG | + | chr4.1:16712488-16712507 | MS.gene08322:intron | 40.0% | |
| ACATCAACAATCTTAGCCAC+AGG | - | chr4.1:16709587-16709606 | None:intergenic | 40.0% | |
| ACCAAAGGTGAAGAAACCTA+AGG | + | chr4.1:16709251-16709270 | MS.gene08322:CDS | 40.0% | |
| ACCTTAGGTTTCTTCACCTT+TGG | - | chr4.1:16709255-16709274 | None:intergenic | 40.0% | |
| ACCTTTACTCTAGCTGAAGA+TGG | - | chr4.1:16712382-16712401 | None:intergenic | 40.0% | |
| ACTTACAAATCCCCTTGACA+TGG | + | chr4.1:16713178-16713197 | MS.gene08322:intron | 40.0% | |
| ATCAAAGTTTCCAATGCTGG+AGG | - | chr4.1:16712343-16712362 | None:intergenic | 40.0% | |
| ATCAAATGACCCTCCAAAAG+GGG | - | chr4.1:16711257-16711276 | None:intergenic | 40.0% | |
| ATGAGGAGATACAGATGATG+CGG | + | chr4.1:16709483-16709502 | MS.gene08322:CDS | 40.0% | |
| ATGGATTCTTCAGATTCCAC+TGG | - | chr4.1:16710904-16710923 | None:intergenic | 40.0% | |
| CAACAAATATTGCAACCTGC+AGG | - | chr4.1:16711778-16711797 | None:intergenic | 40.0% | |
| CAACAGCTATGGTACGAAAA+GGG | - | chr4.1:16712211-16712230 | None:intergenic | 40.0% | |
| CAACCATCCATACAATCACT+GGG | - | chr4.1:16711895-16711914 | None:intergenic | 40.0% | |
| CAACTATTCGGAACTACCAA+AGG | - | chr4.1:16711398-16711417 | None:intergenic | 40.0% | |
| CACTGAATGCTACAAGCTAT+GGG | + | chr4.1:16712783-16712802 | MS.gene08322:CDS | 40.0% | |
| CACTTAGTTCCTTTCTGCTT+TGG | + | chr4.1:16710619-16710638 | MS.gene08322:CDS | 40.0% | |
| CCACCAAGACTTATCTTACT+AGG | - | chr4.1:16711297-16711316 | None:intergenic | 40.0% | |
| CCTAGTAAGATAAGTCTTGG+TGG | + | chr4.1:16711294-16711313 | MS.gene08322:intron | 40.0% | |
| CCTATAGTGGTTAGCAAAAG+TGG | + | chr4.1:16712113-16712132 | MS.gene08322:CDS | 40.0% | |
| CCTTTACTCTAGCTGAAGAT+GGG | - | chr4.1:16712381-16712400 | None:intergenic | 40.0% | |
| CTAAGCTAAGGCAGAACAAT+AGG | + | chr4.1:16710856-16710875 | MS.gene08322:intron | 40.0% | |
| CTCTCTCAGAATGGGATATA+TGG | - | chr4.1:16712514-16712533 | None:intergenic | 40.0% | |
| CTTTACTCTAGCTGAAGATG+GGG | - | chr4.1:16712380-16712399 | None:intergenic | 40.0% | |
| GAATCAAATGACCCTCCAAA+AGG | - | chr4.1:16711259-16711278 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCATCTCA+CGG | + | chr4.1:16708913-16708932 | MS.gene08322:CDS | 40.0% | |
| GGACCTAGTAAGATAAGTCT+TGG | + | chr4.1:16711291-16711310 | MS.gene08322:intron | 40.0% | |
| GGGAGATCCTAAAGAACTTT+AGG | + | chr4.1:16713090-16713109 | MS.gene08322:CDS | 40.0% | |
| GGTAACAAACTCACCTTCAA+CGG | + | chr4.1:16709012-16709031 | MS.gene08322:CDS | 40.0% | |
| GTCTCAGATATGTGAGAAAG+TGG | - | chr4.1:16710552-16710571 | None:intergenic | 40.0% | |
| GTGAGATGAGGAGTTAGATT+CGG | - | chr4.1:16708914-16708933 | None:intergenic | 40.0% | |
| GTGATCCTAGATGCAATAGA+CGG | - | chr4.1:16713160-16713179 | None:intergenic | 40.0% | |
| TAAGCATTAGCGAGATGAAG+GGG | - | chr4.1:16712018-16712037 | None:intergenic | 40.0% | |
| TCCTTGGGTGAAATTGTTCA+GGG | + | chr4.1:16709556-16709575 | MS.gene08322:CDS | 40.0% | |
| TCGGAGAAGGAAAATTCTTG+AGG | + | chr4.1:16709077-16709096 | MS.gene08322:CDS | 40.0% | |
| TCTATCCGTCTATTGCATCT+AGG | + | chr4.1:16713152-16713171 | MS.gene08322:intron | 40.0% | |
| TCTTCAGCTAGAGTAAAGGT+AGG | + | chr4.1:16712382-16712401 | MS.gene08322:intron | 40.0% | |
| TCTTTGTCATGAAACTGCTG+TGG | + | chr4.1:16710752-16710771 | MS.gene08322:intron | 40.0% | |
| TGGAGTTTCACAATGCAAAG+AGG | - | chr4.1:16709833-16709852 | None:intergenic | 40.0% | |
| TGTGAAACTCCATACGATGA+GGG | + | chr4.1:16709841-16709860 | MS.gene08322:intron | 40.0% | |
| TGTTCTGCCTTAGCTTAGTT+TGG | - | chr4.1:16710854-16710873 | None:intergenic | 40.0% | |
| TTAACCTACTGGAATGGAGA+TGG | - | chr4.1:16711531-16711550 | None:intergenic | 40.0% | |
| TTCCTTGGGTGAAATTGTTC+AGG | + | chr4.1:16709555-16709574 | MS.gene08322:CDS | 40.0% | |
| TTGTGAAACTCCATACGATG+AGG | + | chr4.1:16709840-16709859 | MS.gene08322:intron | 40.0% | |
| TTTACTCTAGCTGAAGATGG+GGG | - | chr4.1:16712379-16712398 | None:intergenic | 40.0% | |
| ! | AAGACGATGATGATGTGGAT+CGG | + | chr4.1:16709184-16709203 | MS.gene08322:CDS | 40.0% |
| ! | CATATATCCCATTCTGAGAG+AGG | + | chr4.1:16712512-16712531 | MS.gene08322:CDS | 40.0% |
| ! | CTTTGGTAGTTCCGAATAGT+TGG | + | chr4.1:16711396-16711415 | MS.gene08322:intron | 40.0% |
| ! | GGACAGTATTCTTACTGACT+TGG | + | chr4.1:16710647-16710666 | MS.gene08322:CDS | 40.0% |
| ! | GTGGTTGTTGTTAGTTGTGA+CGG | + | chr4.1:16711313-16711332 | MS.gene08322:intron | 40.0% |
| ! | TCAAAAATGACTTGCACCCA+TGG | - | chr4.1:16713330-16713349 | None:intergenic | 40.0% |
| ! | TCATGAGTGCTTTTATGACC+TGG | + | chr4.1:16711192-16711211 | MS.gene08322:intron | 40.0% |
| ! | TGACGGCATTTTGTGACTTT+GGG | + | chr4.1:16711330-16711349 | MS.gene08322:intron | 40.0% |
| ! | TGGTGTAAAATTTCTGGAGG+AGG | + | chr4.1:16711015-16711034 | MS.gene08322:intron | 40.0% |
| ! | TTCCTTTCTGCTTTGGTCTT+TGG | + | chr4.1:16710626-16710645 | MS.gene08322:CDS | 40.0% |
| !! | ATGCGGTTTGCGGATTATTT+TGG | + | chr4.1:16709500-16709519 | MS.gene08322:CDS | 40.0% |
| !! | CCACTTTTGCTAACCACTAT+AGG | - | chr4.1:16712116-16712135 | None:intergenic | 40.0% |
| !! | GTTAACGGTGCTGTAAGAAA+AGG | + | chr4.1:16712301-16712320 | MS.gene08322:CDS | 40.0% |
| !! | GTTGAAGGTGAGTTTGTTAC+CGG | - | chr4.1:16709013-16709032 | None:intergenic | 40.0% |
| !! | TACTTGTTGCACAGCCTTTT+TGG | - | chr4.1:16710700-16710719 | None:intergenic | 40.0% |
| !! | TTGGTTTGTATTCTTGGTCG+CGG | + | chr4.1:16712081-16712100 | MS.gene08322:CDS | 40.0% |
| !! | TTTTAGGGACCAAAAGGCAA+AGG | - | chr4.1:16711651-16711670 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTCTACCCCAACA+TGG | + | chr4.1:16713381-16713400 | MS.gene08322:CDS | 40.0% |
| AAACCAAATCCCTGGATTGC+GGG | - | chr4.1:16712142-16712161 | None:intergenic | 45.0% | |
| AAAGTTTCCAATGCTGGAGG+AGG | - | chr4.1:16712340-16712359 | None:intergenic | 45.0% | |
| AAGATGGGGGGAAAGTAACA+CGG | - | chr4.1:16712366-16712385 | None:intergenic | 45.0% | |
| AAGCTGCAAAACCAAATCCC+TGG | - | chr4.1:16712150-16712169 | None:intergenic | 45.0% | |
| ACTCCCAGTGATTGTATGGA+TGG | + | chr4.1:16711889-16711908 | MS.gene08322:CDS | 45.0% | |
| AGAAAGGAACTAAGTGCCTC+GGG | - | chr4.1:16710615-16710634 | None:intergenic | 45.0% | |
| AGATGAGGAGTTAGATTCGG+CGG | - | chr4.1:16708911-16708930 | None:intergenic | 45.0% | |
| AGTAAAGGTAGGTGTTCAGC+TGG | + | chr4.1:16712393-16712412 | MS.gene08322:intron | 45.0% | |
| ATCTATGTGCAGGCTTCAGT+AGG | + | chr4.1:16712047-16712066 | MS.gene08322:intron | 45.0% | |
| ATCTCAGGAAGAGTTTCACG+AGG | + | chr4.1:16713304-16713323 | MS.gene08322:CDS | 45.0% | |
| CAGAAAGGAACTAAGTGCCT+CGG | - | chr4.1:16710616-16710635 | None:intergenic | 45.0% | |
| CAGTTGACTGGATCAATCGT+CGG | + | chr4.1:16710586-16710605 | MS.gene08322:CDS | 45.0% | |
| CCAAAGGTGGACAAAGACAA+TGG | - | chr4.1:16711382-16711401 | None:intergenic | 45.0% | |
| CCATTGTCTTTGTCCACCTT+TGG | + | chr4.1:16711379-16711398 | MS.gene08322:intron | 45.0% | |
| CCCATCTTCAGCTAGAGTAA+AGG | + | chr4.1:16712378-16712397 | MS.gene08322:CDS | 45.0% | |
| CGGATCAAAGTTTCCAATGC+TGG | - | chr4.1:16712346-16712365 | None:intergenic | 45.0% | |
| CTACCCCAACATGGAATCTT+TGG | + | chr4.1:16713390-16713409 | MS.gene08322:CDS | 45.0% | |
| CTATTCGGAACTACCAAAGG+TGG | - | chr4.1:16711395-16711414 | None:intergenic | 45.0% | |
| CTTATCTTACTAGGTCCGGT+TGG | - | chr4.1:16711288-16711307 | None:intergenic | 45.0% | |
| CTTCTTATGCTTCTTCGCGT+AGG | - | chr4.1:16708965-16708984 | None:intergenic | 45.0% | |
| GAAGATTGATGCAGCTGATC+TGG | + | chr4.1:16709296-16709315 | MS.gene08322:CDS | 45.0% | |
| GAAGGAAAATTCTTGAGGCG+AGG | + | chr4.1:16709082-16709101 | MS.gene08322:CDS | 45.0% | |
| GAATATATCGCGCAGACAGA+TGG | - | chr4.1:16713134-16713153 | None:intergenic | 45.0% | |
| GATACAGATGATGCGGTTTG+CGG | + | chr4.1:16709490-16709509 | MS.gene08322:CDS | 45.0% | |
| GATTGTATGGATGGTTGCTC+AGG | + | chr4.1:16711898-16711917 | MS.gene08322:CDS | 45.0% | |
| GCAACAGCTATGGTACGAAA+AGG | - | chr4.1:16712212-16712231 | None:intergenic | 45.0% | |
| GCAACCATCCATACAATCAC+TGG | - | chr4.1:16711896-16711915 | None:intergenic | 45.0% | |
| GCACTGAATGCTACAAGCTA+TGG | + | chr4.1:16712782-16712801 | MS.gene08322:CDS | 45.0% | |
| GCTTGTAGCATTCAGTGCTT+TGG | - | chr4.1:16712780-16712799 | None:intergenic | 45.0% | |
| GGAGAATGGAAAAGCTGAAG+AGG | + | chr4.1:16709212-16709231 | MS.gene08322:CDS | 45.0% | |
| GGTGAAGAAACCTAAGGTGA+CGG | + | chr4.1:16709257-16709276 | MS.gene08322:CDS | 45.0% | |
| GTCCAAAGACCAAAGCAGAA+AGG | - | chr4.1:16710631-16710650 | None:intergenic | 45.0% | |
| GTTTCCATCTCCATTCCAGT+AGG | + | chr4.1:16711524-16711543 | MS.gene08322:intron | 45.0% | |
| TAGGCCTGTCTTTGTGATTC+AGG | - | chr4.1:16710929-16710948 | None:intergenic | 45.0% | |
| TCAGTAGGAGATCTCTCAGT+TGG | + | chr4.1:16712062-16712081 | MS.gene08322:CDS | 45.0% | |
| TCCCTGAACAATTTCACCCA+AGG | - | chr4.1:16709560-16709579 | None:intergenic | 45.0% | |
| TGAGCAGGAGAAAGTTTACC+AGG | + | chr4.1:16712977-16712996 | MS.gene08322:intron | 45.0% | |
| TGTATTGCCCAAATTGAGGG+AGG | + | chr4.1:16711841-16711860 | MS.gene08322:CDS | 45.0% | |
| TGTGACCAAGGGTTCCAAAA+AGG | + | chr4.1:16710683-16710702 | MS.gene08322:CDS | 45.0% | |
| TGTTCACTATTAAGGGCCAG+TGG | + | chr4.1:16710885-16710904 | MS.gene08322:intron | 45.0% | |
| TTACTCTAGCTGAAGATGGG+GGG | - | chr4.1:16712378-16712397 | None:intergenic | 45.0% | |
| TTCGATACTCCAGGATTGTC+TGG | - | chr4.1:16712724-16712743 | None:intergenic | 45.0% | |
| ! | ACGGCATTTTGTGACTTTGG+GGG | + | chr4.1:16711332-16711351 | MS.gene08322:intron | 45.0% |
| ! | ATATCCCATTCTGAGAGAGG+TGG | + | chr4.1:16712515-16712534 | MS.gene08322:CDS | 45.0% |
| ! | ATGATGATGTGGATCGGTCA+GGG | + | chr4.1:16709190-16709209 | MS.gene08322:CDS | 45.0% |
| ! | ATTGATTCCTCCTCCAGCAT+TGG | + | chr4.1:16712330-16712349 | MS.gene08322:CDS | 45.0% |
| ! | CAAGTCGCTTGAGTTGCATT+CGG | + | chr4.1:16709050-16709069 | MS.gene08322:CDS | 45.0% |
| ! | CGATGAAGACGATGATGATG+TGG | + | chr4.1:16709179-16709198 | MS.gene08322:CDS | 45.0% |
| ! | CGCGAAGAAGCATAAGAAGA+AGG | + | chr4.1:16708966-16708985 | MS.gene08322:CDS | 45.0% |
| ! | GAACTTCTGTAGGTGCTATC+GGG | + | chr4.1:16711157-16711176 | MS.gene08322:intron | 45.0% |
| ! | GACGGCATTTTGTGACTTTG+GGG | + | chr4.1:16711331-16711350 | MS.gene08322:intron | 45.0% |
| ! | GGAACTTCTGTAGGTGCTAT+CGG | + | chr4.1:16711156-16711175 | MS.gene08322:intron | 45.0% |
| ! | GTGACGGCATTTTGTGACTT+TGG | + | chr4.1:16711329-16711348 | MS.gene08322:intron | 45.0% |
| ! | TTGAGTTGCATTCGGAGGAT+CGG | + | chr4.1:16709058-16709077 | MS.gene08322:CDS | 45.0% |
| ! | TTGGTGGCTGGCGTTATTAT+TGG | - | chr4.1:16710825-16710844 | None:intergenic | 45.0% |
| ! | TTTTGTCCACCCCTAAAGCA+CGG | + | chr4.1:16712269-16712288 | MS.gene08322:CDS | 45.0% |
| !! | GGCTCTGGTGTTTTTGCATT+TGG | + | chr4.1:16712414-16712433 | MS.gene08322:intron | 45.0% |
| !! | GTTTGGTTTATGTTGGTGGC+TGG | - | chr4.1:16710837-16710856 | None:intergenic | 45.0% |
| !! | TTCTTTAGGATCTCCCTGAG+TGG | - | chr4.1:16713086-16713105 | None:intergenic | 45.0% |
| !!! | GGATTTGGTTTTGCAGCTTG+TGG | + | chr4.1:16712151-16712170 | MS.gene08322:CDS | 45.0% |
| AACCCTTGGTCACAGTTTGC+TGG | - | chr4.1:16710677-16710696 | None:intergenic | 50.0% | |
| AAGAGCCACCTCTCTCAGAA+TGG | - | chr4.1:16712523-16712542 | None:intergenic | 50.0% | |
| AATTCTTGAGGCGAGGACTG+CGG | + | chr4.1:16709089-16709108 | MS.gene08322:CDS | 50.0% | |
| ACCAAAACAGCCCGTGCTTT+AGG | - | chr4.1:16712283-16712302 | None:intergenic | 50.0% | |
| ACCATTGTGGCACGTGTGAA+GGG | - | chr4.1:16710999-16711018 | None:intergenic | 50.0% | |
| AGAGCCACCTCTCTCAGAAT+GGG | - | chr4.1:16712522-16712541 | None:intergenic | 50.0% | |
| AGCCAGCAAACTGTGACCAA+GGG | + | chr4.1:16710672-16710691 | MS.gene08322:CDS | 50.0% | |
| AGCTATGGTACGAAAAGGGG+TGG | - | chr4.1:16712207-16712226 | None:intergenic | 50.0% | |
| ATCTCCCTGAGTGGCTCATA+AGG | - | chr4.1:16713077-16713096 | None:intergenic | 50.0% | |
| ATTGTTCAGGGAGTCACCTG+TGG | + | chr4.1:16709568-16709587 | MS.gene08322:CDS | 50.0% | |
| CAAAACAGCCCGTGCTTTAG+GGG | - | chr4.1:16712281-16712300 | None:intergenic | 50.0% | |
| CCAAAACAGCCCGTGCTTTA+GGG | - | chr4.1:16712282-16712301 | None:intergenic | 50.0% | |
| GAAGAGTTTCACGAGGCCAT+GGG | + | chr4.1:16713311-16713330 | MS.gene08322:CDS | 50.0% | |
| GATCGCTGCTTCGATCTAAC+TGG | - | chr4.1:16709138-16709157 | None:intergenic | 50.0% | |
| GATGAAAACTACACCCCCTC+CGG | + | chr4.1:16708871-16708890 | MS.gene08322:CDS | 50.0% | |
| GCGGAATCTCCTACCTATAG+TGG | + | chr4.1:16712100-16712119 | MS.gene08322:CDS | 50.0% | |
| GCGGAGGCTGAATTTGATGA+TGG | + | chr4.1:16709111-16709130 | MS.gene08322:CDS | 50.0% | |
| GCTATCATAGCAGCAGGAGA+AGG | + | chr4.1:16712600-16712619 | MS.gene08322:CDS | 50.0% | |
| GCTGCTTCTTTCGATACTCC+AGG | - | chr4.1:16712733-16712752 | None:intergenic | 50.0% | |
| GGCATCGTTTGAGCAGAATG+AGG | + | chr4.1:16709466-16709485 | MS.gene08322:intron | 50.0% | |
| GGTGAAGATGGCAACAGCTA+TGG | - | chr4.1:16712222-16712241 | None:intergenic | 50.0% | |
| GTCTCCTTATGAGCCACTCA+GGG | + | chr4.1:16713070-16713089 | MS.gene08322:CDS | 50.0% | |
| TAGCCAGCAAACTGTGACCA+AGG | + | chr4.1:16710671-16710690 | MS.gene08322:CDS | 50.0% | |
| TATGGATGGTTGCTCAGGTG+AGG | + | chr4.1:16711903-16711922 | MS.gene08322:intron | 50.0% | |
| TCATAGCAGCAGGAGAAGGT+TGG | + | chr4.1:16712604-16712623 | MS.gene08322:intron | 50.0% | |
| TGGTACGAAAAGGGGTGGAA+AGG | - | chr4.1:16712202-16712221 | None:intergenic | 50.0% | |
| TGTCTCCTTATGAGCCACTC+AGG | + | chr4.1:16713069-16713088 | MS.gene08322:CDS | 50.0% | |
| TTTGTCCACCCCTAAAGCAC+GGG | + | chr4.1:16712270-16712289 | MS.gene08322:CDS | 50.0% | |
| ! | ATTCTGAGAGAGGTGGCTCT+TGG | + | chr4.1:16712522-16712541 | MS.gene08322:CDS | 50.0% |
| ! | CGCTTGCTACAATGTTCTCC+TGG | - | chr4.1:16712998-16713017 | None:intergenic | 50.0% |
| ! | GAAGAAACCTAAGGTGACGG+TGG | + | chr4.1:16709260-16709279 | MS.gene08322:CDS | 50.0% |
| ! | GATGATGATGTGGATCGGTC+AGG | + | chr4.1:16709189-16709208 | MS.gene08322:CDS | 50.0% |
| ! | TGATGATGTGGATCGGTCAG+GGG | + | chr4.1:16709191-16709210 | MS.gene08322:CDS | 50.0% |
| !! | GGTGAGTTTGTTACCGGTAC+CGG | - | chr4.1:16709007-16709026 | None:intergenic | 50.0% |
| !!! | CACAGCCTTTTTGGAACCCT+TGG | - | chr4.1:16710691-16710710 | None:intergenic | 50.0% |
| !!! | GCACGGGCTGTTTTGGTTAA+CGG | + | chr4.1:16712286-16712305 | MS.gene08322:CDS | 50.0% |
| AAAGTGGCAACCCGCAATCC+AGG | + | chr4.1:16712129-16712148 | MS.gene08322:CDS | 55.0% | |
| AAGTGGCAACCCGCAATCCA+GGG | + | chr4.1:16712130-16712149 | MS.gene08322:CDS | 55.0% | |
| ACCAACAGCCACAGCAAGCA+CGG | - | chr4.1:16713359-16713378 | None:intergenic | 55.0% | |
| ACCCTTCACACGTGCCACAA+TGG | + | chr4.1:16710995-16711014 | MS.gene08322:intron | 55.0% | |
| AGCAGCGTCGTTTCCGTTGA+AGG | - | chr4.1:16709028-16709047 | None:intergenic | 55.0% | |
| AGCCACAGCAAGCACGGTAA+AGG | - | chr4.1:16713353-16713372 | None:intergenic | 55.0% | |
| AGGAGTTAGATTCGGCGGTG+TGG | - | chr4.1:16708906-16708925 | None:intergenic | 55.0% | |
| CAACCCGCAATCCAGGGATT+TGG | + | chr4.1:16712136-16712155 | MS.gene08322:CDS | 55.0% | |
| CACCATTGTGGCACGTGTGA+AGG | - | chr4.1:16711000-16711019 | None:intergenic | 55.0% | |
| CAGCGCTGCTCAGTTTCCTT+GGG | + | chr4.1:16709541-16709560 | MS.gene08322:CDS | 55.0% | |
| GGAAGAGTTTCACGAGGCCA+TGG | + | chr4.1:16713310-16713329 | MS.gene08322:CDS | 55.0% | |
| GGAGTTAGATTCGGCGGTGT+GGG | - | chr4.1:16708905-16708924 | None:intergenic | 55.0% | |
| TCAGCGCTGCTCAGTTTCCT+TGG | + | chr4.1:16709540-16709559 | MS.gene08322:CDS | 55.0% | |
| TGCATTCGGAGGATCGGAGA+AGG | + | chr4.1:16709064-16709083 | MS.gene08322:CDS | 55.0% | |
| ! | CTGGCACGTTTTCCTTTCCG+AGG | - | chr4.1:16710097-16710116 | None:intergenic | 55.0% |
| ! | GAAACCTAAGGTGACGGTGG+CGG | + | chr4.1:16709263-16709282 | MS.gene08322:CDS | 55.0% |
| ! | GACCTTTACCGTGCTTGCTG+TGG | + | chr4.1:16713348-16713367 | MS.gene08322:CDS | 55.0% |
| ! | GTCGCTTGAGTTGCATTCGG+AGG | + | chr4.1:16709053-16709072 | MS.gene08322:CDS | 55.0% |
| !! | CCCTAAAGCACGGGCTGTTT+TGG | + | chr4.1:16712279-16712298 | MS.gene08322:CDS | 55.0% |
| AAGGAAGCTAACGGCGTCGC+CGG | + | chr4.1:16708985-16709004 | MS.gene08322:CDS | 60.0% | |
| AGATTCGGCGGTGTGGGAGA+TGG | - | chr4.1:16708899-16708918 | None:intergenic | 60.0% | |
| CTGAGAGAGGTGGCTCTTGG+CGG | + | chr4.1:16712525-16712544 | MS.gene08322:CDS | 60.0% | |
| GACCTTCTGCCAGCCGTGAT+CGG | - | chr4.1:16708941-16708960 | None:intergenic | 60.0% | |
| GATCAATCGTCGGTCTCCCG+AGG | + | chr4.1:16710596-16710615 | MS.gene08322:CDS | 60.0% | |
| GTGGATCGGTCAGGGGAGAA+TGG | + | chr4.1:16709198-16709217 | MS.gene08322:CDS | 60.0% | |
| GTGTGGGAGATGGATCCGGA+GGG | - | chr4.1:16708889-16708908 | None:intergenic | 60.0% | |
| TGTGGGAGATGGATCCGGAG+GGG | - | chr4.1:16708888-16708907 | None:intergenic | 60.0% | |
| ! | GGTAGGTGTTCAGCTGGCTC+TGG | + | chr4.1:16712399-16712418 | MS.gene08322:intron | 60.0% |
| !! | AACAGCCCGTGCTTTAGGGG+TGG | - | chr4.1:16712278-16712297 | None:intergenic | 60.0% |
| !! | ACCGTGCTTGCTGTGGCTGT+TGG | + | chr4.1:16713355-16713374 | MS.gene08322:CDS | 60.0% |
| !! | TCATCTCACGGCGCCGATCA+CGG | + | chr4.1:16708925-16708944 | MS.gene08322:CDS | 60.0% |
| GCTTCCGCCACCGTCACCTT+AGG | - | chr4.1:16709270-16709289 | None:intergenic | 65.0% | |
| GGCGGTGTGGGAGATGGATC+CGG | - | chr4.1:16708893-16708912 | None:intergenic | 65.0% | |
| GGTGTGGGAGATGGATCCGG+AGG | - | chr4.1:16708890-16708909 | None:intergenic | 65.0% | |
| GTGATCGGCGCCGTGAGATG+AGG | - | chr4.1:16708926-16708945 | None:intergenic | 65.0% | |
| GTGGCTCTTGGCGGTTCTCC+TGG | + | chr4.1:16712534-16712553 | MS.gene08322:CDS | 65.0% | |
| GTGGGAGATGGATCCGGAGG+GGG | - | chr4.1:16708887-16708906 | None:intergenic | 65.0% | |
| TCTTGAGGCGAGGACTGCGG+CGG | + | chr4.1:16709092-16709111 | MS.gene08322:CDS | 65.0% | |
| CGCCGATCACGGCTGGCAGA+AGG | + | chr4.1:16708936-16708955 | MS.gene08322:CDS | 70.0% | |
| GCTAACGGCGTCGCCGGTAC+CGG | + | chr4.1:16708991-16709010 | MS.gene08322:CDS | 70.0% | |
| TGAGGCGAGGACTGCGGCGG+AGG | + | chr4.1:16709095-16709114 | MS.gene08322:CDS | 75.0% | |
| !! | CTCACGGCGCCGATCACGGC+TGG | + | chr4.1:16708929-16708948 | MS.gene08322:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 16708868 | 16713453 | 16708868 | ID=MS.gene08322 |
| chr4.1 | mRNA | 16708868 | 16713453 | 16708868 | ID=MS.gene08322.t1;Parent=MS.gene08322 |
| chr4.1 | exon | 16708868 | 16709341 | 16708868 | ID=MS.gene08322.t1.exon1;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16708868 | 16709341 | 16708868 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16709467 | 16709604 | 16709467 | ID=MS.gene08322.t1.exon2;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16709467 | 16709604 | 16709467 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16710546 | 16710734 | 16710546 | ID=MS.gene08322.t1.exon3;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16710546 | 16710734 | 16710546 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16711782 | 16711919 | 16711782 | ID=MS.gene08322.t1.exon4;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16711782 | 16711919 | 16711782 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16712059 | 16712177 | 16712059 | ID=MS.gene08322.t1.exon5;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16712059 | 16712177 | 16712059 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16712267 | 16712399 | 16712267 | ID=MS.gene08322.t1.exon6;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16712267 | 16712399 | 16712267 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16712492 | 16712621 | 16712492 | ID=MS.gene08322.t1.exon7;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16712492 | 16712621 | 16712492 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16712725 | 16712804 | 16712725 | ID=MS.gene08322.t1.exon8;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16712725 | 16712804 | 16712725 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16712984 | 16713118 | 16712984 | ID=MS.gene08322.t1.exon9;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16712984 | 16713118 | 16712984 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| chr4.1 | exon | 16713226 | 16713453 | 16713226 | ID=MS.gene08322.t1.exon10;Parent=MS.gene08322.t1 |
| chr4.1 | CDS | 16713226 | 16713453 | 16713226 | ID=cds.MS.gene08322.t1;Parent=MS.gene08322.t1 |
| Gene Sequence |
| Protein sequence |
