Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22386.t1 | XP_013450013.1 | 93.7 | 618 | 39 | 0 | 1 | 618 | 1 | 618 | 0.00E+00 | 1120.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22386.t1 | Q96TW9 | 23.6 | 229 | 160 | 6 | 285 | 511 | 202 | 417 | 2.5e-06 | 55.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22386.t1 | A0A072U3T9 | 93.7 | 618 | 39 | 0 | 1 | 618 | 1 | 618 | 0.0e+00 | 1120.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049153 | MS.gene22386 | 0.804321 | 2.28E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene22386 | 0.878134 | 3.59E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene22386 | 0.847789 | 9.26E-60 | -1.69E-46 |
| MS.gene049396 | MS.gene22386 | 0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene049480 | MS.gene22386 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene049488 | MS.gene22386 | 0.830296 | 3.18E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene22386 | 0.80011 | 1.68E-48 | -1.69E-46 |
| MS.gene050060 | MS.gene22386 | 0.838458 | 2.84E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene22386 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene22386 | 0.815563 | 8.67E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene22386 | -0.818873 | 1.56E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene22386 | 0.842195 | 3.00E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene22386 | 0.832214 | 1.07E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene22386 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene22386 | 0.87195 | 4.62E-67 | -1.69E-46 |
| MS.gene050971 | MS.gene22386 | 0.867665 | 1.16E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene22386 | 0.837804 | 4.19E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene22386 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene051521 | MS.gene22386 | 0.827635 | 1.40E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene22386 | 0.819336 | 1.22E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene22386 | 0.829846 | 4.10E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene22386 | 0.826148 | 3.18E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene22386 | 0.840747 | 7.22E-58 | -1.69E-46 |
| MS.gene052136 | MS.gene22386 | 0.852094 | 5.78E-61 | -1.69E-46 |
| MS.gene052188 | MS.gene22386 | 0.877159 | 7.85E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene22386 | 0.823517 | 1.33E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene22386 | 0.83365 | 4.72E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene22386 | 0.874375 | 7.09E-68 | -1.69E-46 |
| MS.gene052346 | MS.gene22386 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene22386 | 0.853734 | 1.96E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene22386 | 0.80882 | 2.57E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene22386 | 0.836058 | 1.17E-56 | -1.69E-46 |
| MS.gene052784 | MS.gene22386 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene22386 | 0.80228 | 6.05E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene22386 | 0.865879 | 4.29E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene22386 | 0.805829 | 1.10E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene22386 | 0.876109 | 1.81E-68 | -1.69E-46 |
| MS.gene053557 | MS.gene22386 | 0.830584 | 2.71E-55 | -1.69E-46 |
| MS.gene053758 | MS.gene22386 | 0.835076 | 2.07E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene22386 | 0.812181 | 4.82E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene22386 | 0.872936 | 2.17E-67 | -1.69E-46 |
| MS.gene054183 | MS.gene22386 | 0.813831 | 2.10E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene22386 | 0.867623 | 1.19E-65 | -1.69E-46 |
| MS.gene054955 | MS.gene22386 | 0.820846 | 5.53E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene22386 | 0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene22386 | 0.868916 | 4.58E-66 | -1.69E-46 |
| MS.gene055369 | MS.gene22386 | 0.828753 | 7.54E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene22386 | 0.81144 | 6.99E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene22386 | 0.833803 | 4.32E-56 | -1.69E-46 |
| MS.gene055601 | MS.gene22386 | -0.814458 | 1.53E-51 | -1.69E-46 |
| MS.gene055666 | MS.gene22386 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene22386 | 0.829476 | 5.04E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene22386 | 0.839273 | 1.75E-57 | -1.69E-46 |
| MS.gene055909 | MS.gene22386 | 0.830564 | 2.74E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene22386 | 0.831876 | 1.30E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene22386 | 0.815836 | 7.54E-52 | -1.69E-46 |
| MS.gene056233 | MS.gene22386 | 0.842442 | 2.58E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene22386 | 0.823774 | 1.16E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene22386 | 0.841315 | 5.12E-58 | -1.69E-46 |
| MS.gene056511 | MS.gene22386 | 0.883378 | 4.72E-71 | -1.69E-46 |
| MS.gene056609 | MS.gene22386 | 0.828095 | 1.09E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene22386 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene22386 | 0.83386 | 4.18E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene22386 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene22386 | -0.842535 | 2.44E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene22386 | 0.802466 | 5.54E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene22386 | 0.815519 | 8.87E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene22386 | 0.836178 | 1.09E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene22386 | 0.860743 | 1.67E-63 | -1.69E-46 |
| MS.gene057448 | MS.gene22386 | 0.858279 | 9.19E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene22386 | 0.854503 | 1.18E-61 | -1.69E-46 |
| MS.gene057450 | MS.gene22386 | 0.850823 | 1.32E-60 | -1.69E-46 |
| MS.gene057537 | MS.gene22386 | 0.855299 | 6.92E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene22386 | 0.829323 | 5.49E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene22386 | 0.859285 | 4.60E-63 | -1.69E-46 |
| MS.gene057823 | MS.gene22386 | 0.856394 | 3.31E-62 | -1.69E-46 |
| MS.gene057825 | MS.gene22386 | 0.805855 | 1.09E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene22386 | 0.861719 | 8.42E-64 | -1.69E-46 |
| MS.gene058002 | MS.gene22386 | 0.812051 | 5.15E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene22386 | 0.842926 | 1.92E-58 | -1.69E-46 |
| MS.gene058218 | MS.gene22386 | -0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene22386 | 0.812938 | 3.29E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene22386 | 0.904171 | 1.62E-79 | -1.69E-46 |
| MS.gene058949 | MS.gene22386 | 0.809522 | 1.82E-50 | -1.69E-46 |
| MS.gene059043 | MS.gene22386 | -0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene22386 | 0.835081 | 2.06E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene22386 | 0.824438 | 8.07E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene22386 | 0.844508 | 7.24E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene22386 | 0.895753 | 7.10E-76 | -1.69E-46 |
| MS.gene059368 | MS.gene22386 | 0.813119 | 3.01E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene22386 | -0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene22386 | 0.860829 | 1.57E-63 | -1.69E-46 |
| MS.gene059455 | MS.gene22386 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene22386 | 0.810921 | 9.06E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene22386 | 0.862097 | 6.45E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene22386 | 0.833571 | 4.94E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene22386 | 0.841079 | 5.90E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene22386 | 0.835786 | 1.37E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene22386 | 0.835537 | 1.58E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene22386 | 0.806397 | 8.39E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene22386 | 0.890482 | 9.47E-74 | -1.69E-46 |
| MS.gene05984 | MS.gene22386 | 0.806798 | 6.90E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene22386 | 0.807288 | 5.44E-50 | -1.69E-46 |
| MS.gene059933 | MS.gene22386 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene22386 | 0.829636 | 4.61E-55 | -1.69E-46 |
| MS.gene060372 | MS.gene22386 | 0.809252 | 2.07E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene22386 | 0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene22386 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene22386 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene22386 | 0.828614 | 8.15E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene22386 | 0.831418 | 1.69E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene22386 | 0.824031 | 1.01E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene22386 | 0.838287 | 3.15E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene22386 | 0.840038 | 1.11E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene22386 | -0.853365 | 2.51E-61 | -1.69E-46 |
| MS.gene061154 | MS.gene22386 | 0.859673 | 3.51E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene22386 | 0.860716 | 1.70E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22386.t1 | MTR_7g102880 | 96.602 | 618 | 21 | 0 | 1 | 618 | 1 | 618 | 0.0 | 1219 |
| MS.gene22386.t1 | MTR_1g111550 | 63.378 | 598 | 195 | 7 | 18 | 607 | 14 | 595 | 0.0 | 759 |
| MS.gene22386.t1 | MTR_1g111510 | 63.113 | 591 | 203 | 6 | 19 | 606 | 16 | 594 | 0.0 | 746 |
| MS.gene22386.t1 | MTR_1g111540 | 63.122 | 583 | 200 | 5 | 19 | 601 | 16 | 583 | 0.0 | 736 |
| MS.gene22386.t1 | MTR_1g111530 | 59.734 | 601 | 221 | 8 | 12 | 609 | 5 | 587 | 0.0 | 723 |
| MS.gene22386.t1 | MTR_1g050550 | 57.479 | 595 | 241 | 4 | 13 | 601 | 8 | 596 | 0.0 | 689 |
| MS.gene22386.t1 | MTR_1g059080 | 54.132 | 593 | 251 | 5 | 9 | 595 | 4 | 581 | 0.0 | 653 |
| MS.gene22386.t1 | MTR_7g029015 | 36.000 | 575 | 328 | 7 | 25 | 568 | 11 | 576 | 1.69e-105 | 331 |
| MS.gene22386.t1 | MTR_2g100400 | 32.692 | 572 | 329 | 7 | 26 | 578 | 4 | 538 | 4.28e-104 | 326 |
| MS.gene22386.t1 | MTR_5g090570 | 34.727 | 550 | 312 | 12 | 29 | 568 | 11 | 523 | 3.71e-101 | 318 |
| MS.gene22386.t1 | MTR_3g099150 | 35.315 | 555 | 330 | 7 | 29 | 569 | 15 | 554 | 3.24e-97 | 308 |
| MS.gene22386.t1 | MTR_4g073690 | 34.743 | 544 | 328 | 8 | 29 | 569 | 15 | 534 | 3.93e-94 | 300 |
| MS.gene22386.t1 | MTR_5g022380 | 30.605 | 562 | 350 | 7 | 29 | 588 | 13 | 536 | 7.41e-83 | 270 |
| MS.gene22386.t1 | MTR_2g450710 | 31.351 | 555 | 352 | 9 | 30 | 569 | 13 | 553 | 1.66e-76 | 254 |
| MS.gene22386.t1 | MTR_4g116210 | 29.412 | 561 | 362 | 12 | 30 | 569 | 12 | 559 | 3.64e-76 | 253 |
| MS.gene22386.t1 | MTR_5g022380 | 30.172 | 464 | 284 | 7 | 127 | 588 | 1 | 426 | 2.42e-61 | 210 |
| MS.gene22386.t1 | MTR_4g073690 | 34.015 | 391 | 240 | 7 | 29 | 416 | 15 | 390 | 1.78e-57 | 199 |
| MS.gene22386.t1 | MTR_7g083660 | 26.943 | 579 | 379 | 16 | 29 | 583 | 7 | 565 | 3.91e-38 | 149 |
| MS.gene22386.t1 | MTR_3g466040 | 26.471 | 544 | 364 | 10 | 26 | 568 | 4 | 512 | 7.81e-37 | 144 |
| MS.gene22386.t1 | MTR_2g104250 | 32.035 | 231 | 114 | 5 | 339 | 569 | 102 | 289 | 1.14e-32 | 128 |
| MS.gene22386.t1 | MTR_3g466110 | 25.048 | 519 | 340 | 10 | 27 | 538 | 5 | 481 | 1.52e-31 | 129 |
| MS.gene22386.t1 | MTR_5g026350 | 26.003 | 573 | 386 | 18 | 29 | 577 | 7 | 565 | 1.50e-28 | 120 |
| MS.gene22386.t1 | MTR_8g071920 | 25.174 | 576 | 387 | 17 | 29 | 577 | 48 | 606 | 2.21e-23 | 105 |
| MS.gene22386.t1 | MTR_5g095240 | 53.521 | 71 | 33 | 0 | 505 | 575 | 2 | 72 | 9.67e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22386.t1 | AT2G39210 | 63.452 | 591 | 201 | 5 | 19 | 604 | 11 | 591 | 0.0 | 749 |
| MS.gene22386.t1 | AT2G28120 | 58.087 | 575 | 228 | 4 | 18 | 592 | 6 | 567 | 0.0 | 677 |
| MS.gene22386.t1 | AT1G74780 | 36.364 | 572 | 308 | 7 | 24 | 579 | 2 | 533 | 2.29e-112 | 347 |
| MS.gene22386.t1 | AT1G18940 | 35.689 | 566 | 302 | 8 | 24 | 575 | 4 | 521 | 1.66e-108 | 337 |
| MS.gene22386.t1 | AT5G14120 | 36.237 | 574 | 336 | 7 | 26 | 577 | 13 | 578 | 2.67e-107 | 335 |
| MS.gene22386.t1 | AT2G34355 | 36.984 | 557 | 298 | 9 | 29 | 575 | 7 | 520 | 7.87e-107 | 332 |
| MS.gene22386.t1 | AT5G50520 | 35.818 | 550 | 316 | 10 | 25 | 568 | 12 | 530 | 1.46e-105 | 330 |
| MS.gene22386.t1 | AT5G50630 | 35.818 | 550 | 316 | 10 | 25 | 568 | 12 | 530 | 1.46e-105 | 330 |
| MS.gene22386.t1 | AT2G34350 | 36.445 | 557 | 291 | 8 | 29 | 569 | 7 | 516 | 7.73e-104 | 325 |
| MS.gene22386.t1 | AT2G34350 | 36.445 | 557 | 291 | 8 | 29 | 569 | 7 | 516 | 7.73e-104 | 325 |
| MS.gene22386.t1 | AT3G01930 | 33.616 | 589 | 356 | 7 | 16 | 577 | 3 | 583 | 3.19e-101 | 320 |
| MS.gene22386.t1 | AT2G16660 | 34.608 | 549 | 319 | 9 | 29 | 569 | 14 | 530 | 4.05e-91 | 292 |
| MS.gene22386.t1 | AT4G34950 | 33.215 | 563 | 325 | 10 | 29 | 568 | 16 | 550 | 4.99e-90 | 290 |
| MS.gene22386.t1 | AT1G80530 | 30.521 | 557 | 346 | 10 | 30 | 570 | 14 | 545 | 6.96e-76 | 253 |
| MS.gene22386.t1 | AT3G01930 | 32.636 | 478 | 287 | 7 | 127 | 577 | 1 | 470 | 3.72e-72 | 240 |
| MS.gene22386.t1 | AT2G34355 | 36.408 | 412 | 217 | 8 | 166 | 575 | 2 | 370 | 1.96e-68 | 227 |
| MS.gene22386.t1 | AT3G01930 | 32.192 | 438 | 265 | 5 | 16 | 426 | 3 | 435 | 4.79e-65 | 220 |
| MS.gene22386.t1 | AT2G16660 | 33.584 | 399 | 234 | 8 | 29 | 419 | 14 | 389 | 6.31e-53 | 186 |
| MS.gene22386.t1 | AT5G45275 | 25.862 | 580 | 361 | 17 | 29 | 569 | 7 | 556 | 5.49e-33 | 134 |
| MS.gene22386.t1 | AT4G19450 | 26.598 | 579 | 374 | 19 | 29 | 577 | 7 | 564 | 1.15e-32 | 133 |
| MS.gene22386.t1 | AT2G30300 | 26.055 | 545 | 341 | 12 | 30 | 568 | 8 | 496 | 1.74e-29 | 122 |
| MS.gene22386.t1 | AT3G01630 | 24.373 | 558 | 369 | 16 | 29 | 569 | 23 | 544 | 3.48e-28 | 119 |
| MS.gene22386.t1 | AT3G01630 | 24.373 | 558 | 369 | 16 | 29 | 569 | 41 | 562 | 4.42e-28 | 119 |
| MS.gene22386.t1 | AT1G31470 | 23.188 | 552 | 382 | 16 | 29 | 569 | 43 | 563 | 1.41e-27 | 117 |
| MS.gene22386.t1 | AT4G19450 | 27.427 | 412 | 260 | 13 | 29 | 412 | 7 | 407 | 4.15e-24 | 105 |
Find 110 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCAACTTTGTACAATTT+TGG | 0.125037 | 7.3:-11239333 | MS.gene22386:CDS |
| TACTTTGCGTCTGTGATTAT+TGG | 0.150842 | 7.3:-11239423 | MS.gene22386:CDS |
| ATTAACAGCGATCGATAATT+TGG | 0.157661 | 7.3:-11239664 | MS.gene22386:CDS |
| ATTACAGCATCAACTTTAAT+TGG | 0.174590 | 7.3:-11239144 | MS.gene22386:CDS |
| AAAACACTACCACGACTATT+AGG | 0.179253 | 7.3:+11240320 | None:intergenic |
| AGAAGCTTTGAAACAATTAA+AGG | 0.221004 | 7.3:-11239244 | MS.gene22386:CDS |
| TTGAGAAAGTTAACATGTTT+TGG | 0.227175 | 7.3:+11240033 | None:intergenic |
| TCTTTGGTTACTTCATGATA+TGG | 0.227436 | 7.3:-11240466 | MS.gene22386:CDS |
| TATATTTCACTTGGTCTTGC+TGG | 0.234161 | 7.3:-11240080 | MS.gene22386:CDS |
| ATTTATCATAGTTTATATTA+TGG | 0.240602 | 7.3:-11240248 | MS.gene22386:CDS |
| AAATTCATACACCTAAAATT+TGG | 0.241794 | 7.3:-11240427 | MS.gene22386:CDS |
| GGACAAATTGGTCATTCATT+AGG | 0.259260 | 7.3:-11239642 | MS.gene22386:CDS |
| GGTACCATCATGAATTTCTT+TGG | 0.292358 | 7.3:-11240482 | MS.gene22386:CDS |
| ATCGATAATTTGGGACAAAT+TGG | 0.294649 | 7.3:-11239654 | MS.gene22386:CDS |
| GTGTAGTCTTCACCTCTATT+AGG | 0.296409 | 7.3:+11239759 | None:intergenic |
| GACAAATTGGTCATTCATTA+GGG | 0.303260 | 7.3:-11239641 | MS.gene22386:CDS |
| GAGGTTACTCGTAGTCTTCC+AGG | 0.313637 | 7.3:-11238949 | MS.gene22386:CDS |
| TTCTCAAGGATTGAGTATAT+TGG | 0.324545 | 7.3:-11240017 | MS.gene22386:CDS |
| GTTTAGAGTTGTTTGGTCAT+AGG | 0.368898 | 7.3:+11240598 | None:intergenic |
| GGGATATATATGAAAAGTAT+AGG | 0.370258 | 7.3:-11239071 | MS.gene22386:CDS |
| AAAGGTTATGTTGGTTTAAG+TGG | 0.379908 | 7.3:-11240287 | MS.gene22386:CDS |
| AAACACTACCACGACTATTA+GGG | 0.381760 | 7.3:+11240321 | None:intergenic |
| CCTTGGGTTGTTCTCTTAAC+CGG | 0.386871 | 7.3:-11240503 | MS.gene22386:CDS |
| AATTTCAAAATTCTAATAGT+TGG | 0.391290 | 7.3:+11240152 | None:intergenic |
| ATATTGAAGTATCCTTCAAT+AGG | 0.410247 | 7.3:+11239919 | None:intergenic |
| TAAGGAGGTTTAGAGTTGTT+TGG | 0.421800 | 7.3:+11240591 | None:intergenic |
| TGTGATTTCATTGATTAAAC+CGG | 0.431273 | 7.3:+11240529 | None:intergenic |
| TTGTGTCACTGGTGAGCATA+TGG | 0.432615 | 7.3:-11239593 | MS.gene22386:CDS |
| ACAAGAAAAGTAGTTCTTGT+TGG | 0.433260 | 7.3:-11239800 | MS.gene22386:CDS |
| GTCATGCTTCTCTCTTGTGT+TGG | 0.442120 | 7.3:-11239483 | MS.gene22386:CDS |
| GACCACGACAACACCACATT+AGG | 0.448744 | 7.3:-11238979 | MS.gene22386:CDS |
| CAATGAAATCACACCACCTT+GGG | 0.449615 | 7.3:-11240519 | MS.gene22386:CDS |
| TTGTTCCTTTCCAACTATTG+AGG | 0.457456 | 7.3:+11240747 | None:intergenic |
| GAACAACATACAACAACAAA+AGG | 0.460232 | 7.3:-11240129 | MS.gene22386:CDS |
| ATATTCAATGTGAGAGTGGC+TGG | 0.460635 | 7.3:-11239282 | MS.gene22386:CDS |
| GGATATATATGAAAAGTATA+GGG | 0.460797 | 7.3:-11239070 | MS.gene22386:CDS |
| TTTGAAACAATTAAAGGCTA+AGG | 0.462101 | 7.3:-11239238 | MS.gene22386:CDS |
| GCCAACGTCGGCGTTATCTC+CGG | 0.462661 | 7.3:-11240548 | MS.gene22386:CDS |
| TTAACAGCGATCGATAATTT+GGG | 0.465416 | 7.3:-11239663 | MS.gene22386:CDS |
| CAAATTCAACAACCTATTGA+AGG | 0.472074 | 7.3:-11239931 | MS.gene22386:CDS |
| TATCTAGGACGGGTTGCATC+GGG | 0.477814 | 7.3:-11239567 | MS.gene22386:CDS |
| TCTACTTCTTCCACTTGTTG+TGG | 0.484078 | 7.3:-11239970 | MS.gene22386:CDS |
| GGGAAGGACTTGACTTGTGT+TGG | 0.484414 | 7.3:-11239198 | MS.gene22386:CDS |
| TAAGGGACTTAGAAGACAAA+AGG | 0.484940 | 7.3:-11239220 | MS.gene22386:CDS |
| GCAGGTGCAACATACATGTT+TGG | 0.486048 | 7.3:-11240653 | MS.gene22386:CDS |
| AAAAGAAAAGAAACAGCAGC+AGG | 0.487359 | 7.3:+11240179 | None:intergenic |
| CTATCTAGGACGGGTTGCAT+CGG | 0.488175 | 7.3:-11239568 | MS.gene22386:CDS |
| CCAATGGTGTCCTCAATAGT+TGG | 0.495651 | 7.3:-11240757 | MS.gene22386:CDS |
| CCAACTATTGAGGACACCAT+TGG | 0.496349 | 7.3:+11240757 | None:intergenic |
| TGGAGTAGAGTGTTATAGAA+TGG | 0.496401 | 7.3:-11239178 | MS.gene22386:CDS |
| GTGAGCATATGGAACTATCT+AGG | 0.502165 | 7.3:-11239582 | MS.gene22386:CDS |
| GATATGATTGCAAACATCAA+TGG | 0.506011 | 7.3:+11239378 | None:intergenic |
| TCACTAATCATGTCCGTAGC+AGG | 0.510061 | 7.3:-11240671 | MS.gene22386:CDS |
| TGTTTGGTCATAGGATAAAG+AGG | 0.510244 | 7.3:+11240607 | None:intergenic |
| CATGTATGTTGCACCTGCTA+CGG | 0.511700 | 7.3:+11240658 | None:intergenic |
| CGAGGTCTTTGAAGAAACTA+AGG | 0.516799 | 7.3:+11240573 | None:intergenic |
| GTATTTGGTTAACAAAATCT+CGG | 0.518125 | 7.3:+11239536 | None:intergenic |
| TTGAAACAATTAAAGGCTAA+GGG | 0.518670 | 7.3:-11239237 | MS.gene22386:CDS |
| TAGTCTTCACCTCTATTAGG+AGG | 0.519398 | 7.3:+11239762 | None:intergenic |
| AAAACATGTTAACTTTCTCA+AGG | 0.522886 | 7.3:-11240031 | MS.gene22386:CDS |
| CTTAGTTTCTTCAAAGACCT+CGG | 0.526978 | 7.3:-11240572 | MS.gene22386:CDS |
| ATGACAAAAGTGAGCAGATA+CGG | 0.527866 | 7.3:+11239501 | None:intergenic |
| TGGAGCTGTGGCAAGTCCTG+TGG | 0.539827 | 7.3:-11239313 | MS.gene22386:CDS |
| AGGATTGAGTATATTGGTGA+TGG | 0.544620 | 7.3:-11240011 | MS.gene22386:CDS |
| AATCTTCTTTATATTTCACT+TGG | 0.545702 | 7.3:-11240089 | MS.gene22386:CDS |
| AAGGGACTTAGAAGACAAAA+GGG | 0.546304 | 7.3:-11239219 | MS.gene22386:CDS |
| ATGTGTCTTTATATTTGCAT+TGG | 0.546883 | 7.3:-11240401 | MS.gene22386:CDS |
| CAACACCAAAAGTTGTTGCT+AGG | 0.549019 | 7.3:+11239694 | None:intergenic |
| ATATTCAAACCTCCTAATAG+AGG | 0.550040 | 7.3:-11239771 | MS.gene22386:CDS |
| GGTGTCCTCAATAGTTGGAA+AGG | 0.552334 | 7.3:-11240752 | MS.gene22386:CDS |
| TCAATGAAATCACACCACCT+TGG | 0.555077 | 7.3:-11240520 | MS.gene22386:CDS |
| CGCCTAATGTGGTGTTGTCG+TGG | 0.556806 | 7.3:+11238977 | None:intergenic |
| TCTCTAAATACCACAACAAG+TGG | 0.558404 | 7.3:+11239960 | None:intergenic |
| AAAGAAATTCATGATGGTAC+CGG | 0.560101 | 7.3:+11240484 | None:intergenic |
| ACTCGTAGTCTTCCAGGGTA+AGG | 0.561027 | 7.3:-11238943 | None:intergenic |
| AGAAAAGTAGTTCTTGTTGG+AGG | 0.563181 | 7.3:-11239797 | MS.gene22386:CDS |
| GTCATCACACGAACAAGAAG+CGG | 0.569693 | 7.3:-11239856 | MS.gene22386:CDS |
| ACCAACGACCTGTGAGAAGT+TGG | 0.577172 | 7.3:+11240711 | None:intergenic |
| AAGAATTTCCCTAATAGTCG+TGG | 0.586229 | 7.3:-11240329 | MS.gene22386:CDS |
| GGAGCTGTGGCAAGTCCTGT+GGG | 0.587082 | 7.3:-11239312 | MS.gene22386:CDS |
| TTCACATACCAACTTCTCAC+AGG | 0.591142 | 7.3:-11240719 | MS.gene22386:CDS |
| ACCAACTTCTCACAGGTCGT+TGG | 0.591906 | 7.3:-11240712 | MS.gene22386:CDS |
| CATATGGAACTATCTAGGAC+GGG | 0.596098 | 7.3:-11239577 | MS.gene22386:CDS |
| CACCACATTAGGCGTTGCCG+AGG | 0.596232 | 7.3:-11238968 | MS.gene22386:CDS |
| TTACATATTCAATGTGAGAG+TGG | 0.596665 | 7.3:-11239286 | MS.gene22386:CDS |
| ACCATTGGTGGTGTGCTCTG+TGG | 0.600584 | 7.3:+11240772 | None:intergenic |
| GCATATGGAACTATCTAGGA+CGG | 0.605084 | 7.3:-11239578 | MS.gene22386:CDS |
| GGTCACATTCTAATCGCGCT+AGG | 0.608279 | 7.3:-11239462 | MS.gene22386:CDS |
| AACCTCGGCAACGCCTAATG+TGG | 0.613118 | 7.3:+11238966 | None:intergenic |
| ACTATTGAGGACACCATTGG+TGG | 0.614443 | 7.3:+11240760 | None:intergenic |
| AAAGTGAGCAGATACGGACG+AGG | 0.617413 | 7.3:+11239507 | None:intergenic |
| TATATATGAAAAGTATAGGG+AGG | 0.617418 | 7.3:-11239067 | MS.gene22386:CDS |
| TAACGCCGACGTTGGCGCCG+AGG | 0.621010 | 7.3:+11240555 | None:intergenic |
| GTAACCAAAGAAATTCATGA+TGG | 0.621770 | 7.3:+11240478 | None:intergenic |
| ACCGGAGATAACGCCGACGT+TGG | 0.623351 | 7.3:+11240547 | None:intergenic |
| TGTGATGACATGTTCTGAAG+TGG | 0.625635 | 7.3:+11239870 | None:intergenic |
| AAAGACCTCGGCGCCAACGT+CGG | 0.629943 | 7.3:-11240560 | MS.gene22386:CDS |
| TTGAATATGTAAGATCCCAC+AGG | 0.630754 | 7.3:+11239297 | None:intergenic |
| GGTCTTTGAAGAAACTAAGG+AGG | 0.631093 | 7.3:+11240576 | None:intergenic |
| ACACTGACATGTCCTTACCC+TGG | 0.636405 | 7.3:+11238931 | None:intergenic |
| GCCACAGAGCACACCACCAA+TGG | 0.637209 | 7.3:-11240773 | MS.gene22386:CDS |
| AGGTTACTCGTAGTCTTCCA+GGG | 0.641519 | 7.3:-11238948 | MS.gene22386:CDS |
| TGTGAGAAGTTGGTATGTGA+AGG | 0.651582 | 7.3:+11240721 | None:intergenic |
| TGGAAGACTACGAGTAACCT+CGG | 0.660983 | 7.3:+11238951 | None:intergenic |
| GTGATGACATGTTCTGAAGT+GGG | 0.679933 | 7.3:+11239871 | None:intergenic |
| CCGGTTAAGAGAACAACCCA+AGG | 0.693962 | 7.3:+11240503 | None:intergenic |
| ACTTAGAAGACAAAAGGGGA+AGG | 0.694205 | 7.3:-11239214 | MS.gene22386:CDS |
| AGGGACTTAGAAGACAAAAG+GGG | 0.733376 | 7.3:-11239218 | MS.gene22386:CDS |
| GTTAAGAGAACAACCCAAGG+TGG | 0.750485 | 7.3:+11240506 | None:intergenic |
| AAGTGAGCAGATACGGACGA+GGG | 0.776273 | 7.3:+11239508 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATCATAGTTTATATTA+TGG | - | chr7.3:11239476-11239495 | MS.gene22386:CDS | 10.0% |
| !! | AATTTCAAAATTCTAATAGT+TGG | + | chr7.3:11239575-11239594 | None:intergenic | 15.0% |
| !!! | ATGTTTTGTTTCTTTTATTT+TGG | - | chr7.3:11240603-11240622 | MS.gene22386:CDS | 15.0% |
| !!! | TGTATGAATTTTTTTAGTAA+CGG | + | chr7.3:11239288-11239307 | None:intergenic | 15.0% |
| !! | AAATTCATACACCTAAAATT+TGG | - | chr7.3:11239297-11239316 | MS.gene22386:CDS | 20.0% |
| !! | AATCTTCTTTATATTTCACT+TGG | - | chr7.3:11239635-11239654 | MS.gene22386:CDS | 20.0% |
| !! | GTATTTCAATCCAAAAATTT+CGG | + | chr7.3:11240371-11240390 | None:intergenic | 20.0% |
| !!! | AAAGTTGTAGTACTTTTATT+TGG | + | chr7.3:11240112-11240131 | None:intergenic | 20.0% |
| !!! | AAGTTGTAGTACTTTTATTT+GGG | + | chr7.3:11240111-11240130 | None:intergenic | 20.0% |
| !!! | GGATATATATGAAAAGTATA+GGG | - | chr7.3:11240654-11240673 | MS.gene22386:CDS | 20.0% |
| !!! | TATTCAACTTTGTACAATTT+TGG | - | chr7.3:11240391-11240410 | MS.gene22386:CDS | 20.0% |
| ! | AAAACATGTTAACTTTCTCA+AGG | - | chr7.3:11239693-11239712 | MS.gene22386:CDS | 25.0% |
| ! | ATGTGTCTTTATATTTGCAT+TGG | - | chr7.3:11239323-11239342 | MS.gene22386:CDS | 25.0% |
| ! | ATTACAGCATCAACTTTAAT+TGG | - | chr7.3:11240580-11240599 | MS.gene22386:CDS | 25.0% |
| ! | CAAATGAAGATTGTGAAAAA+TGG | - | chr7.3:11240700-11240719 | MS.gene22386:CDS | 25.0% |
| ! | GTATTTGGTTAACAAAATCT+CGG | + | chr7.3:11240191-11240210 | None:intergenic | 25.0% |
| ! | TTGAAACAATTAAAGGCTAA+GGG | - | chr7.3:11240487-11240506 | MS.gene22386:CDS | 25.0% |
| !! | AGGACTAGAAAATTTTACAA+AGG | - | chr7.3:11240631-11240650 | MS.gene22386:CDS | 25.0% |
| !! | AGGATAAAGAGGTTTTTATT+TGG | + | chr7.3:11239109-11239128 | None:intergenic | 25.0% |
| !! | ATATTGAAGTATCCTTCAAT+AGG | + | chr7.3:11239808-11239827 | None:intergenic | 25.0% |
| !! | GACTAGAAAATTTTACAAAG+GGG | - | chr7.3:11240633-11240652 | MS.gene22386:CDS | 25.0% |
| !! | GGACTAGAAAATTTTACAAA+GGG | - | chr7.3:11240632-11240651 | MS.gene22386:CDS | 25.0% |
| !! | GGGATATATATGAAAAGTAT+AGG | - | chr7.3:11240653-11240672 | MS.gene22386:CDS | 25.0% |
| !! | TATATATGAAAAGTATAGGG+AGG | - | chr7.3:11240657-11240676 | MS.gene22386:CDS | 25.0% |
| !! | TGTGATTTCATTGATTAAAC+CGG | + | chr7.3:11239198-11239217 | None:intergenic | 25.0% |
| !! | TTGAGAAAGTTAACATGTTT+TGG | + | chr7.3:11239694-11239713 | None:intergenic | 25.0% |
| !! | TTTGAAACAATTAAAGGCTA+AGG | - | chr7.3:11240486-11240505 | MS.gene22386:CDS | 25.0% |
| !!! | AGAAGCTTTGAAACAATTAA+AGG | - | chr7.3:11240480-11240499 | MS.gene22386:CDS | 25.0% |
| !!! | AGTGTTTTAGGTCTTTTAAA+AGG | - | chr7.3:11239419-11239438 | MS.gene22386:CDS | 25.0% |
| !!! | CTCTTATTTTACTTATTGCT+TGG | - | chr7.3:11239519-11239538 | MS.gene22386:CDS | 25.0% |
| !!! | GTGATTATTGGTTTTTGTTT+TGG | - | chr7.3:11240313-11240332 | MS.gene22386:CDS | 25.0% |
| !!! | TTTCTTTTATTTTGGTGCTT+AGG | - | chr7.3:11240611-11240630 | MS.gene22386:CDS | 25.0% |
| AAAGAAATTCATGATGGTAC+CGG | + | chr7.3:11239243-11239262 | None:intergenic | 30.0% | |
| AAGATTGTGAAAAATGGTGA+TGG | - | chr7.3:11240706-11240725 | MS.gene22386:CDS | 30.0% | |
| ACAAGAAAAGTAGTTCTTGT+TGG | - | chr7.3:11239924-11239943 | MS.gene22386:CDS | 30.0% | |
| ATATTCAAACCTCCTAATAG+AGG | - | chr7.3:11239953-11239972 | MS.gene22386:CDS | 30.0% | |
| ATTAACAGCGATCGATAATT+TGG | - | chr7.3:11240060-11240079 | MS.gene22386:CDS | 30.0% | |
| CAAATTCAACAACCTATTGA+AGG | - | chr7.3:11239793-11239812 | MS.gene22386:CDS | 30.0% | |
| GAACAACATACAACAACAAA+AGG | - | chr7.3:11239595-11239614 | MS.gene22386:CDS | 30.0% | |
| GACAAATTGGTCATTCATTA+GGG | - | chr7.3:11240083-11240102 | MS.gene22386:CDS | 30.0% | |
| GATATGATTGCAAACATCAA+TGG | + | chr7.3:11240349-11240368 | None:intergenic | 30.0% | |
| GTAACCAAAGAAATTCATGA+TGG | + | chr7.3:11239249-11239268 | None:intergenic | 30.0% | |
| TCTTTGGTTACTTCATGATA+TGG | - | chr7.3:11239258-11239277 | MS.gene22386:CDS | 30.0% | |
| TTAACAGCGATCGATAATTT+GGG | - | chr7.3:11240061-11240080 | MS.gene22386:CDS | 30.0% | |
| TTACATATTCAATGTGAGAG+TGG | - | chr7.3:11240438-11240457 | MS.gene22386:CDS | 30.0% | |
| TTCTCAAGGATTGAGTATAT+TGG | - | chr7.3:11239707-11239726 | MS.gene22386:CDS | 30.0% | |
| ! | AGACACATTTGCCAAATTTT+AGG | + | chr7.3:11239311-11239330 | None:intergenic | 30.0% |
| ! | ATCGATAATTTGGGACAAAT+TGG | - | chr7.3:11240070-11240089 | MS.gene22386:CDS | 30.0% |
| ! | GCAATCATATCCGAAATTTT+TGG | - | chr7.3:11240358-11240377 | MS.gene22386:CDS | 30.0% |
| ! | TCTCAAACTTTTACTAACAC+TGG | - | chr7.3:11239353-11239372 | MS.gene22386:CDS | 30.0% |
| !! | AAAGGTTATGTTGGTTTAAG+TGG | - | chr7.3:11239437-11239456 | MS.gene22386:CDS | 30.0% |
| !! | GGTCTTTTAAAAGGTTATGT+TGG | - | chr7.3:11239428-11239447 | MS.gene22386:CDS | 30.0% |
| AAAACACTACCACGACTATT+AGG | + | chr7.3:11239407-11239426 | None:intergenic | 35.0% | |
| AAAAGAAAAGAAACAGCAGC+AGG | + | chr7.3:11239548-11239567 | None:intergenic | 35.0% | |
| AAACACTACCACGACTATTA+GGG | + | chr7.3:11239406-11239425 | None:intergenic | 35.0% | |
| AAGAATTTCCCTAATAGTCG+TGG | - | chr7.3:11239395-11239414 | MS.gene22386:CDS | 35.0% | |
| AAGGGACTTAGAAGACAAAA+GGG | - | chr7.3:11240505-11240524 | MS.gene22386:CDS | 35.0% | |
| AGAAAAGTAGTTCTTGTTGG+AGG | - | chr7.3:11239927-11239946 | MS.gene22386:CDS | 35.0% | |
| AGGATTGAGTATATTGGTGA+TGG | - | chr7.3:11239713-11239732 | MS.gene22386:CDS | 35.0% | |
| ATGACAAAAGTGAGCAGATA+CGG | + | chr7.3:11240226-11240245 | None:intergenic | 35.0% | |
| CTTAGTTTCTTCAAAGACCT+CGG | - | chr7.3:11239152-11239171 | MS.gene22386:CDS | 35.0% | |
| GGACAAATTGGTCATTCATT+AGG | - | chr7.3:11240082-11240101 | MS.gene22386:CDS | 35.0% | |
| GGTACCATCATGAATTTCTT+TGG | - | chr7.3:11239242-11239261 | MS.gene22386:CDS | 35.0% | |
| TAAGGGACTTAGAAGACAAA+AGG | - | chr7.3:11240504-11240523 | MS.gene22386:CDS | 35.0% | |
| TACTTTGCGTCTGTGATTAT+TGG | - | chr7.3:11240301-11240320 | MS.gene22386:CDS | 35.0% | |
| TCTCTAAATACCACAACAAG+TGG | + | chr7.3:11239767-11239786 | None:intergenic | 35.0% | |
| TGTTTGGTCATAGGATAAAG+AGG | + | chr7.3:11239120-11239139 | None:intergenic | 35.0% | |
| TTGAATATGTAAGATCCCAC+AGG | + | chr7.3:11240430-11240449 | None:intergenic | 35.0% | |
| TTGTTCCTTTCCAACTATTG+AGG | + | chr7.3:11238980-11238999 | None:intergenic | 35.0% | |
| ! | CTTTTCCTAGCAACAACTTT+TGG | - | chr7.3:11240025-11240044 | MS.gene22386:CDS | 35.0% |
| ! | GTTTAGAGTTGTTTGGTCAT+AGG | + | chr7.3:11239129-11239148 | None:intergenic | 35.0% |
| ! | TAAGGAGGTTTAGAGTTGTT+TGG | + | chr7.3:11239136-11239155 | None:intergenic | 35.0% |
| ! | TACTACAACTTTTGTGTCAC+TGG | - | chr7.3:11240120-11240139 | MS.gene22386:CDS | 35.0% |
| ! | TGGAGTAGAGTGTTATAGAA+TGG | - | chr7.3:11240546-11240565 | MS.gene22386:CDS | 35.0% |
| ! | TTTTACTAACACTGGTGCTT+TGG | - | chr7.3:11239361-11239380 | MS.gene22386:CDS | 35.0% |
| !! | AATAGTCGTGGTAGTGTTTT+AGG | - | chr7.3:11239407-11239426 | MS.gene22386:CDS | 35.0% |
| !! | TATATTTCACTTGGTCTTGC+TGG | - | chr7.3:11239644-11239663 | MS.gene22386:CDS | 35.0% |
| !!! | GTTTTTGTTTTGGAGCTCAA+TGG | - | chr7.3:11240323-11240342 | MS.gene22386:CDS | 35.0% |
| !!! | TTTGTACAATTTTGGAGCTG+TGG | - | chr7.3:11240399-11240418 | MS.gene22386:CDS | 35.0% |
| ACTTAGAAGACAAAAGGGGA+AGG | - | chr7.3:11240510-11240529 | MS.gene22386:CDS | 40.0% | |
| AGGGACTTAGAAGACAAAAG+GGG | - | chr7.3:11240506-11240525 | MS.gene22386:CDS | 40.0% | |
| ATATTCAATGTGAGAGTGGC+TGG | - | chr7.3:11240442-11240461 | MS.gene22386:CDS | 40.0% | |
| CAACACCAAAAGTTGTTGCT+AGG | + | chr7.3:11240033-11240052 | None:intergenic | 40.0% | |
| CAATGAAATCACACCACCTT+GGG | - | chr7.3:11239205-11239224 | MS.gene22386:CDS | 40.0% | |
| GCATATGGAACTATCTAGGA+CGG | - | chr7.3:11240146-11240165 | MS.gene22386:CDS | 40.0% | |
| GTGAGCATATGGAACTATCT+AGG | - | chr7.3:11240142-11240161 | MS.gene22386:CDS | 40.0% | |
| GTGTAGTCTTCACCTCTATT+AGG | + | chr7.3:11239968-11239987 | None:intergenic | 40.0% | |
| TAGTCTTCACCTCTATTAGG+AGG | + | chr7.3:11239965-11239984 | None:intergenic | 40.0% | |
| TCAATGAAATCACACCACCT+TGG | - | chr7.3:11239204-11239223 | MS.gene22386:CDS | 40.0% | |
| TTCACATACCAACTTCTCAC+AGG | - | chr7.3:11239005-11239024 | MS.gene22386:CDS | 40.0% | |
| ! | CATATGGAACTATCTAGGAC+GGG | - | chr7.3:11240147-11240166 | MS.gene22386:CDS | 40.0% |
| ! | CGAGGTCTTTGAAGAAACTA+AGG | + | chr7.3:11239154-11239173 | None:intergenic | 40.0% |
| ! | GGTCTTTGAAGAAACTAAGG+AGG | + | chr7.3:11239151-11239170 | None:intergenic | 40.0% |
| ! | TCTACTTCTTCCACTTGTTG+TGG | - | chr7.3:11239754-11239773 | MS.gene22386:CDS | 40.0% |
| !! | CTAGCAACAACTTTTGGTGT+TGG | - | chr7.3:11240031-11240050 | MS.gene22386:CDS | 40.0% |
| !! | GTGATGACATGTTCTGAAGT+GGG | + | chr7.3:11239856-11239875 | None:intergenic | 40.0% |
| !! | TGTGAGAAGTTGGTATGTGA+AGG | + | chr7.3:11239006-11239025 | None:intergenic | 40.0% |
| !! | TGTGATGACATGTTCTGAAG+TGG | + | chr7.3:11239857-11239876 | None:intergenic | 40.0% |
| !!! | CAACAACTTTTGGTGTTGGT+GGG | - | chr7.3:11240035-11240054 | MS.gene22386:CDS | 40.0% |
| ACTATTGAGGACACCATTGG+TGG | + | chr7.3:11238967-11238986 | None:intergenic | 45.0% | |
| AGGTTACTCGTAGTCTTCCA+GGG | - | chr7.3:11240776-11240795 | MS.gene22386:CDS | 45.0% | |
| CATGTATGTTGCACCTGCTA+CGG | + | chr7.3:11239069-11239088 | None:intergenic | 45.0% | |
| CCAACTATTGAGGACACCAT+TGG | + | chr7.3:11238970-11238989 | None:intergenic | 45.0% | |
| CCAATGGTGTCCTCAATAGT+TGG | - | chr7.3:11238967-11238986 | MS.gene22386:CDS | 45.0% | |
| GCAGGTGCAACATACATGTT+TGG | - | chr7.3:11239071-11239090 | MS.gene22386:CDS | 45.0% | |
| GGTGTCCTCAATAGTTGGAA+AGG | - | chr7.3:11238972-11238991 | MS.gene22386:CDS | 45.0% | |
| GTCATCACACGAACAAGAAG+CGG | - | chr7.3:11239868-11239887 | MS.gene22386:CDS | 45.0% | |
| GTCATGCTTCTCTCTTGTGT+TGG | - | chr7.3:11240241-11240260 | MS.gene22386:CDS | 45.0% | |
| GTTAAGAGAACAACCCAAGG+TGG | + | chr7.3:11239221-11239240 | None:intergenic | 45.0% | |
| TCACTAATCATGTCCGTAGC+AGG | - | chr7.3:11239053-11239072 | MS.gene22386:CDS | 45.0% | |
| TGGAAGACTACGAGTAACCT+CGG | + | chr7.3:11240776-11240795 | None:intergenic | 45.0% | |
| ! | CCTTGGGTTGTTCTCTTAAC+CGG | - | chr7.3:11239221-11239240 | MS.gene22386:CDS | 45.0% |
| ! | CGGACGAGGGATTTTGTATT+TGG | + | chr7.3:11240206-11240225 | None:intergenic | 45.0% |
| ! | TTGTGTCACTGGTGAGCATA+TGG | - | chr7.3:11240131-11240150 | MS.gene22386:CDS | 45.0% |
| !!! | GCAACAACTTTTGGTGTTGG+TGG | - | chr7.3:11240034-11240053 | MS.gene22386:CDS | 45.0% |
| !!! | TGGTCTTGCTGGTTTTCTCA+TGG | - | chr7.3:11239655-11239674 | MS.gene22386:CDS | 45.0% |
| AAAGTGAGCAGATACGGACG+AGG | + | chr7.3:11240220-11240239 | None:intergenic | 50.0% | |
| AAGTGAGCAGATACGGACGA+GGG | + | chr7.3:11240219-11240238 | None:intergenic | 50.0% | |
| ACCAACGACCTGTGAGAAGT+TGG | + | chr7.3:11239016-11239035 | None:intergenic | 50.0% | |
| ACCAACTTCTCACAGGTCGT+TGG | - | chr7.3:11239012-11239031 | MS.gene22386:CDS | 50.0% | |
| CCGGTTAAGAGAACAACCCA+AGG | + | chr7.3:11239224-11239243 | None:intergenic | 50.0% | |
| GACCACGACAACACCACATT+AGG | - | chr7.3:11240745-11240764 | MS.gene22386:CDS | 50.0% | |
| GAGGTTACTCGTAGTCTTCC+AGG | - | chr7.3:11240775-11240794 | MS.gene22386:CDS | 50.0% | |
| GGTCACATTCTAATCGCGCT+AGG | - | chr7.3:11240262-11240281 | MS.gene22386:CDS | 50.0% | |
| !! | CTATCTAGGACGGGTTGCAT+CGG | - | chr7.3:11240156-11240175 | MS.gene22386:CDS | 50.0% |
| !! | GGGAAGGACTTGACTTGTGT+TGG | - | chr7.3:11240526-11240545 | MS.gene22386:CDS | 50.0% |
| !! | TATCTAGGACGGGTTGCATC+GGG | - | chr7.3:11240157-11240176 | MS.gene22386:CDS | 50.0% |
| AACCTCGGCAACGCCTAATG+TGG | + | chr7.3:11240761-11240780 | None:intergenic | 55.0% | |
| !! | ACCATTGGTGGTGTGCTCTG+TGG | + | chr7.3:11238955-11238974 | None:intergenic | 55.0% |
| !! | CGCCTAATGTGGTGTTGTCG+TGG | + | chr7.3:11240750-11240769 | None:intergenic | 55.0% |
| AAAGACCTCGGCGCCAACGT+CGG | - | chr7.3:11239164-11239183 | MS.gene22386:CDS | 60.0% | |
| ACCGGAGATAACGCCGACGT+TGG | + | chr7.3:11239180-11239199 | None:intergenic | 60.0% | |
| GCCAACGTCGGCGTTATCTC+CGG | - | chr7.3:11239176-11239195 | MS.gene22386:CDS | 60.0% | |
| GCCACAGAGCACACCACCAA+TGG | - | chr7.3:11238951-11238970 | MS.gene22386:CDS | 60.0% | |
| GGAGCTGTGGCAAGTCCTGT+GGG | - | chr7.3:11240412-11240431 | MS.gene22386:CDS | 60.0% | |
| TGGAGCTGTGGCAAGTCCTG+TGG | - | chr7.3:11240411-11240430 | MS.gene22386:CDS | 60.0% | |
| ! | CACCACATTAGGCGTTGCCG+AGG | - | chr7.3:11240756-11240775 | MS.gene22386:CDS | 60.0% |
| TAACGCCGACGTTGGCGCCG+AGG | + | chr7.3:11239172-11239191 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 11238945 | 11240801 | 11238945 | ID=MS.gene22386 |
| chr7.3 | mRNA | 11238945 | 11240801 | 11238945 | ID=MS.gene22386.t1;Parent=MS.gene22386 |
| chr7.3 | exon | 11238945 | 11240801 | 11238945 | ID=MS.gene22386.t1.exon1;Parent=MS.gene22386.t1 |
| chr7.3 | CDS | 11238945 | 11240801 | 11238945 | ID=cds.MS.gene22386.t1;Parent=MS.gene22386.t1 |
| Gene Sequence |
| Protein sequence |
