Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24633.t1 | XP_013466230.1 | 92.4 | 301 | 15 | 1 | 1 | 293 | 45 | 345 | 1.70E-129 | 472.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24633.t1 | Q9LPU2 | 69.0 | 300 | 85 | 1 | 1 | 292 | 48 | 347 | 9.8e-110 | 397.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24633.t1 | A0A072VF94 | 92.4 | 301 | 15 | 1 | 1 | 293 | 45 | 345 | 1.2e-129 | 472.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene24633 | 0.901489 | 2.54E-78 | -1.69E-46 |
| MS.gene049159 | MS.gene24633 | 0.804619 | 1.98E-49 | -1.69E-46 |
| MS.gene049227 | MS.gene24633 | 0.811539 | 6.66E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene24633 | 0.819234 | 1.29E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene24633 | 0.869393 | 3.20E-66 | -1.69E-46 |
| MS.gene049368 | MS.gene24633 | 0.822797 | 1.95E-53 | -1.69E-46 |
| MS.gene049585 | MS.gene24633 | 0.810647 | 1.04E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene24633 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene24633 | 0.877357 | 6.71E-69 | -1.69E-46 |
| MS.gene049850 | MS.gene24633 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene24633 | 0.862576 | 4.60E-64 | -1.69E-46 |
| MS.gene05045 | MS.gene24633 | 0.802863 | 4.58E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene24633 | 0.837015 | 6.67E-57 | -1.69E-46 |
| MS.gene050689 | MS.gene24633 | 0.832734 | 7.98E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene24633 | 0.810865 | 9.32E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene24633 | 0.819553 | 1.09E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene24633 | 0.812887 | 3.38E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene24633 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene051029 | MS.gene24633 | 0.809464 | 1.87E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene24633 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene24633 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene24633 | 0.855369 | 6.61E-62 | -1.69E-46 |
| MS.gene051247 | MS.gene24633 | 0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene24633 | 0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene24633 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene24633 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene24633 | 0.810916 | 9.09E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene24633 | 0.811439 | 7.00E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene24633 | 0.81872 | 1.69E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene24633 | 0.824211 | 9.13E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene24633 | 0.807592 | 4.69E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene24633 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene24633 | -0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene24633 | 0.86629 | 3.18E-65 | -1.69E-46 |
| MS.gene052335 | MS.gene24633 | 0.830719 | 2.51E-55 | -1.69E-46 |
| MS.gene052397 | MS.gene24633 | 0.814898 | 1.22E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene24633 | 0.843637 | 1.24E-58 | -1.69E-46 |
| MS.gene052514 | MS.gene24633 | 0.830579 | 2.71E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene24633 | 0.878626 | 2.41E-69 | -1.69E-46 |
| MS.gene052518 | MS.gene24633 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene24633 | 0.86666 | 2.42E-65 | -1.69E-46 |
| MS.gene052773 | MS.gene24633 | 0.811506 | 6.77E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene24633 | 0.816429 | 5.56E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene24633 | 0.801818 | 7.52E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene24633 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene24633 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene24633 | 0.849097 | 4.02E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene24633 | 0.863838 | 1.87E-64 | -1.69E-46 |
| MS.gene053226 | MS.gene24633 | 0.815817 | 7.61E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene24633 | 0.839212 | 1.81E-57 | -1.69E-46 |
| MS.gene05364 | MS.gene24633 | 0.802478 | 5.51E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene24633 | 0.817631 | 2.98E-52 | -1.69E-46 |
| MS.gene054142 | MS.gene24633 | 0.806164 | 9.39E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene24633 | 0.839864 | 1.23E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene24633 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene24633 | 0.82665 | 2.41E-54 | -1.69E-46 |
| MS.gene054824 | MS.gene24633 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene054943 | MS.gene24633 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene055144 | MS.gene24633 | 0.810065 | 1.39E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene24633 | 0.814902 | 1.22E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene24633 | 0.842859 | 2.00E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene24633 | 0.837368 | 5.42E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene24633 | 0.837853 | 4.07E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene24633 | 0.848652 | 5.35E-60 | -1.69E-46 |
| MS.gene055512 | MS.gene24633 | 0.800994 | 1.11E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene24633 | 0.88334 | 4.87E-71 | -1.69E-46 |
| MS.gene055537 | MS.gene24633 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene24633 | -0.833135 | 6.35E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene24633 | 0.800946 | 1.13E-48 | -1.69E-46 |
| MS.gene055926 | MS.gene24633 | 0.811108 | 8.26E-51 | -1.69E-46 |
| MS.gene056005 | MS.gene24633 | 0.827006 | 1.99E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene24633 | -0.829777 | 4.26E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene24633 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene24633 | 0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene24633 | 0.878806 | 2.08E-69 | -1.69E-46 |
| MS.gene056390 | MS.gene24633 | 0.832797 | 7.70E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene24633 | 0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene056578 | MS.gene24633 | 0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene24633 | 0.849052 | 4.14E-60 | -1.69E-46 |
| MS.gene056677 | MS.gene24633 | 0.803058 | 4.18E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene24633 | 0.849837 | 2.50E-60 | -1.69E-46 |
| MS.gene057034 | MS.gene24633 | 0.83958 | 1.46E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene24633 | 0.825311 | 5.02E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene24633 | 0.831205 | 1.91E-55 | -1.69E-46 |
| MS.gene057360 | MS.gene24633 | 0.811018 | 8.63E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene24633 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene24633 | 0.836018 | 1.20E-56 | -1.69E-46 |
| MS.gene058330 | MS.gene24633 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene24633 | 0.84095 | 6.38E-58 | -1.69E-46 |
| MS.gene058360 | MS.gene24633 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene24633 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene24633 | 0.805053 | 1.61E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene24633 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene058647 | MS.gene24633 | 0.815095 | 1.10E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene24633 | 0.81105 | 8.50E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene24633 | 0.822124 | 2.80E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene24633 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene24633 | 0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene24633 | 0.818827 | 1.60E-52 | -1.69E-46 |
| MS.gene05894 | MS.gene24633 | 0.810738 | 9.93E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene24633 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene24633 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene24633 | 0.814399 | 1.57E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene24633 | 0.835784 | 1.37E-56 | -1.69E-46 |
| MS.gene059570 | MS.gene24633 | 0.838301 | 3.12E-57 | -1.69E-46 |
| MS.gene059725 | MS.gene24633 | 0.812788 | 3.55E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene24633 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene24633 | 0.81821 | 2.21E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene24633 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene24633 | 0.801252 | 9.83E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene24633 | 0.811615 | 6.41E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene24633 | 0.808735 | 2.68E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene24633 | 0.819724 | 9.99E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene24633 | 0.82165 | 3.61E-53 | -1.69E-46 |
| MS.gene061006 | MS.gene24633 | 0.830172 | 3.41E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene24633 | 0.865001 | 8.10E-65 | -1.69E-46 |
| MS.gene061188 | MS.gene24633 | 0.81763 | 2.99E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAGAAAAAGAAACATT+TGG | - | 6095:47169-47188 | MS.gene24633:intron | 15.0% |
| !!! | AAAAAAAAGAAGTTGATTTA+AGG | + | 6095:47610-47629 | None:intergenic | 15.0% |
| !!! | AATAAATCTATTGATTTGTT+GGG | + | 6095:47202-47221 | None:intergenic | 15.0% |
| !!! | GAAAATGAAAATTTTAAAAC+TGG | + | 6095:46818-46837 | None:intergenic | 15.0% |
| !!! | TAATAAATCTATTGATTTGT+TGG | + | 6095:47203-47222 | None:intergenic | 15.0% |
| !! | AAAAAGAAACATTTGGTTAT+GGG | - | 6095:47176-47195 | MS.gene24633:intron | 20.0% |
| !! | AAAGGACATCTTAATATAAA+TGG | + | 6095:47115-47134 | None:intergenic | 20.0% |
| !! | AACACTTGAATATAAATAAC+AGG | + | 6095:47141-47160 | None:intergenic | 20.0% |
| !! | AATATAAATAACAGGAGAAA+AGG | + | 6095:47133-47152 | None:intergenic | 20.0% |
| !! | ACTATATATGCATATATTGT+TGG | - | 6095:47943-47962 | MS.gene24633:intron | 20.0% |
| !!! | AATGAAAATTTTAAAACTGG+AGG | + | 6095:46815-46834 | None:intergenic | 20.0% |
| !!! | CATCATTTTTATTCTTTTGA+AGG | - | 6095:47323-47342 | MS.gene24633:intron | 20.0% |
| ! | AAAAAAATCAGGTATAGCAA+GGG | + | 6095:47686-47705 | None:intergenic | 25.0% |
| ! | AATTTAGAAATCAAACTGGT+TGG | + | 6095:47574-47593 | None:intergenic | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | 6095:46555-46574 | MS.gene24633:intron | 25.0% |
| ! | ATGATTCTAAACCAGTAAAT+TGG | - | 6095:47423-47442 | MS.gene24633:intron | 25.0% |
| ! | CTACAAAAGAAATATTCGAT+TGG | - | 6095:47734-47753 | MS.gene24633:intron | 25.0% |
| ! | GAAAAAGAAACATTTGGTTA+TGG | - | 6095:47175-47194 | MS.gene24633:intron | 25.0% |
| ! | GATGTAAATGTTAACTTCAA+AGG | - | 6095:46986-47005 | MS.gene24633:intron | 25.0% |
| ! | TCTAGATTCAACACAAAAAA+AGG | + | 6095:47898-47917 | None:intergenic | 25.0% |
| ! | TGGTAATTTAGAAATCAAAC+TGG | + | 6095:47578-47597 | None:intergenic | 25.0% |
| ! | TGGTCTATGATAGAATATTA+TGG | - | 6095:46590-46609 | MS.gene24633:intron | 25.0% |
| ! | TTGATTTAAGGAAAGAAACT+TGG | + | 6095:47598-47617 | None:intergenic | 25.0% |
| !! | TTCAGCATCTTTTATTATCT+TGG | - | 6095:47520-47539 | MS.gene24633:intron | 25.0% |
| AAAAAGGTGATCACTTACAA+TGG | + | 6095:47882-47901 | None:intergenic | 30.0% | |
| AAACAGACTTCATTGTTAAC+AGG | - | 6095:47388-47407 | MS.gene24633:intron | 30.0% | |
| AAACTTCCTGTGTTATATAC+CGG | - | 6095:47635-47654 | MS.gene24633:CDS | 30.0% | |
| AAATTAGGCTATTGAAGGAA+GGG | - | 6095:48286-48305 | MS.gene24633:CDS | 30.0% | |
| AACAGACTTCATTGTTAACA+GGG | - | 6095:47389-47408 | MS.gene24633:intron | 30.0% | |
| ACAACAATGGGAAAAAAATC+AGG | + | 6095:47697-47716 | None:intergenic | 30.0% | |
| ACATTATGTGTTCTGACTTT+GGG | - | 6095:48108-48127 | MS.gene24633:intron | 30.0% | |
| AGAAGAAATTAGGCTATTGA+AGG | - | 6095:48281-48300 | MS.gene24633:CDS | 30.0% | |
| ATCAAAACTAAGCATGATTC+CGG | - | 6095:46859-46878 | MS.gene24633:intron | 30.0% | |
| ATCTTTCAGCAAATTGTAAG+TGG | - | 6095:47042-47061 | MS.gene24633:intron | 30.0% | |
| CAATTACTTGACCAATTTAC+TGG | + | 6095:47437-47456 | None:intergenic | 30.0% | |
| CAGTAAATTGGTCAAGTAAT+TGG | - | 6095:47435-47454 | MS.gene24633:intron | 30.0% | |
| CCAAGTTCAATATCTTTCAA+CGG | + | 6095:48324-48343 | None:intergenic | 30.0% | |
| CTGAGATAGTAATCAACAAA+TGG | + | 6095:47821-47840 | None:intergenic | 30.0% | |
| GAAAAAAATCAGGTATAGCA+AGG | + | 6095:47687-47706 | None:intergenic | 30.0% | |
| GAACACATAATGTATTCATG+TGG | + | 6095:48101-48120 | None:intergenic | 30.0% | |
| TACATTACAAAACACAGCTA+AGG | + | 6095:48025-48044 | None:intergenic | 30.0% | |
| TACATTATGTGTTCTGACTT+TGG | - | 6095:48107-48126 | MS.gene24633:intron | 30.0% | |
| TATCATAGACCACCATATTT+CGG | + | 6095:46582-46601 | None:intergenic | 30.0% | |
| TCATTACTACAGAATCTACA+GGG | + | 6095:46456-46475 | None:intergenic | 30.0% | |
| TTTCAAGAAACATCATGGAA+TGG | - | 6095:48158-48177 | MS.gene24633:intron | 30.0% | |
| ! | AGTGTCTTTTAAATTTCTGC+AGG | - | 6095:47978-47997 | MS.gene24633:intron | 30.0% |
| ! | GATCTAAAATGAACATTGAC+TGG | + | 6095:47368-47387 | None:intergenic | 30.0% |
| ! | TTTGTTGATTACTATCTCAG+TGG | - | 6095:47821-47840 | MS.gene24633:intron | 30.0% |
| AATTAGGCTATTGAAGGAAG+GGG | - | 6095:48287-48306 | MS.gene24633:CDS | 35.0% | |
| ACAGACTTCATTGTTAACAG+GGG | - | 6095:47390-47409 | MS.gene24633:intron | 35.0% | |
| ACCAGAAGACATCTTAAAGT+TGG | + | 6095:47858-47877 | None:intergenic | 35.0% | |
| AGATGAAAAGCAAGCATACT+TGG | + | 6095:46387-46406 | None:intergenic | 35.0% | |
| ATAAGAGAGAGAGCTTGAAT+AGG | + | 6095:47788-47807 | None:intergenic | 35.0% | |
| ATGCTTAGAAGCAGAATAAC+CGG | + | 6095:46269-46288 | None:intergenic | 35.0% | |
| CATTACTACAGAATCTACAG+GGG | + | 6095:46455-46474 | None:intergenic | 35.0% | |
| CATTATGTGTTCTGACTTTG+GGG | - | 6095:48109-48128 | MS.gene24633:intron | 35.0% | |
| CCAACAAATAGCATGATTTC+CGG | + | 6095:47657-47676 | None:intergenic | 35.0% | |
| CCATTGTTGTGATAGTCAAT+CGG | - | 6095:47707-47726 | MS.gene24633:intron | 35.0% | |
| CCGTTGAAAGATATTGAACT+TGG | - | 6095:48321-48340 | MS.gene24633:CDS | 35.0% | |
| CGATTGACTATCACAACAAT+GGG | + | 6095:47709-47728 | None:intergenic | 35.0% | |
| CGGCATGGTAATTTATAGTT+GGG | - | 6095:48194-48213 | MS.gene24633:CDS | 35.0% | |
| CTCACTTTCAAGAAACATCA+TGG | - | 6095:48153-48172 | MS.gene24633:intron | 35.0% | |
| GAAAGATATTGAACTTGGTC+AGG | - | 6095:48326-48345 | MS.gene24633:CDS | 35.0% | |
| GAAATTAGGCTATTGAAGGA+AGG | - | 6095:48285-48304 | MS.gene24633:CDS | 35.0% | |
| GCCTAACAGAAGAAGAAATT+AGG | - | 6095:48271-48290 | MS.gene24633:CDS | 35.0% | |
| GCCTAATTTCTTCTTCTGTT+AGG | + | 6095:48275-48294 | None:intergenic | 35.0% | |
| GCTCTCTCTCTTATTATTCT+TGG | - | 6095:47794-47813 | MS.gene24633:intron | 35.0% | |
| GTCATTACTACAGAATCTAC+AGG | + | 6095:46457-46476 | None:intergenic | 35.0% | |
| GTTGCCAATATATCTATCAC+CGG | - | 6095:46322-46341 | MS.gene24633:CDS | 35.0% | |
| GTTTCTCTTATAGATTTCCC+AGG | + | 6095:46526-46545 | None:intergenic | 35.0% | |
| TAAATTCCATATTGCCCACA+TGG | + | 6095:47089-47108 | None:intergenic | 35.0% | |
| TACAGACACATCTTTCATCT+GGG | - | 6095:47221-47240 | MS.gene24633:intron | 35.0% | |
| TCGGCATGGTAATTTATAGT+TGG | - | 6095:48193-48212 | MS.gene24633:CDS | 35.0% | |
| TGATTTCCGGTATATAACAC+AGG | + | 6095:47644-47663 | None:intergenic | 35.0% | |
| TTACAGACACATCTTTCATC+TGG | - | 6095:47220-47239 | MS.gene24633:intron | 35.0% | |
| TTCTAAGCATGTTCCTTTGT+GGG | - | 6095:46279-46298 | MS.gene24633:CDS | 35.0% | |
| TTGAATTGAAGATGAGTGCT+AGG | - | 6095:47267-47286 | MS.gene24633:intron | 35.0% | |
| TTGCCAATATATCTATCACC+GGG | - | 6095:46323-46342 | MS.gene24633:CDS | 35.0% | |
| ! | TAATGAGTTGGACCGAAATA+TGG | - | 6095:46567-46586 | MS.gene24633:intron | 35.0% |
| !! | ACCAACTTTAAGATGTCTTC+TGG | - | 6095:47854-47873 | MS.gene24633:intron | 35.0% |
| !!! | TTAGGCTGTTTTTCGAATGA+GGG | + | 6095:48257-48276 | None:intergenic | 35.0% |
| AAAACTAAGCATGATTCCGG+TGG | - | 6095:46862-46881 | MS.gene24633:intron | 40.0% | |
| AACCAAATAAGCTCCCACAA+AGG | + | 6095:46295-46314 | None:intergenic | 40.0% | |
| ATGGTTGTGGTTATTGGTGT+TGG | - | 6095:46947-46966 | MS.gene24633:intron | 40.0% | |
| CATCCCGGTGATAGATATAT+TGG | + | 6095:46329-46348 | None:intergenic | 40.0% | |
| CCGATTGACTATCACAACAA+TGG | + | 6095:47710-47729 | None:intergenic | 40.0% | |
| CTTCTAAGCATGTTCCTTTG+TGG | - | 6095:46278-46297 | MS.gene24633:CDS | 40.0% | |
| GAAAGTGAAAACACGAGAGT+AGG | + | 6095:46781-46800 | None:intergenic | 40.0% | |
| GCATACTTGGTAGAATCCAA+CGG | + | 6095:46374-46393 | None:intergenic | 40.0% | |
| GGTAATTTATAGTTGGGCTG+TGG | - | 6095:48200-48219 | MS.gene24633:CDS | 40.0% | |
| TATTCATGTGGCCTAAAACC+TGG | + | 6095:48089-48108 | None:intergenic | 40.0% | |
| TCAATCCTTAACCCACTAAC+CGG | + | 6095:46641-46660 | None:intergenic | 40.0% | |
| TCACAGCAAACACTACTCAA+GGG | - | 6095:46907-46926 | MS.gene24633:intron | 40.0% | |
| TGATGATACAACTGCTACAC+AGG | + | 6095:47023-47042 | None:intergenic | 40.0% | |
| TTCACAGCAAACACTACTCA+AGG | - | 6095:46906-46925 | MS.gene24633:intron | 40.0% | |
| TTCCTTTGTGGGAGCTTATT+TGG | - | 6095:46290-46309 | MS.gene24633:CDS | 40.0% | |
| ! | CCGGAAATCATGCTATTTGT+TGG | - | 6095:47654-47673 | MS.gene24633:CDS | 40.0% |
| ! | TTTGCTGTAACTGCTCTTGT+CGG | - | 6095:46226-46245 | MS.gene24633:CDS | 40.0% |
| !! | CTTCCTTTTAGAGACATGTG+CGG | - | 6095:46708-46727 | MS.gene24633:CDS | 40.0% |
| !! | TTGAGTAGTGTTTGCTGTGA+AGG | + | 6095:46907-46926 | None:intergenic | 40.0% |
| !!! | GTTAGGCTGTTTTTCGAATG+AGG | + | 6095:48258-48277 | None:intergenic | 40.0% |
| AATGTGTCTGTTCCACCATG+TGG | - | 6095:47071-47090 | MS.gene24633:intron | 45.0% | |
| ATCCAACGGAATTGAGCATG+AGG | + | 6095:46360-46379 | None:intergenic | 45.0% | |
| ATGTGTCTGTTCCACCATGT+GGG | - | 6095:47072-47091 | MS.gene24633:intron | 45.0% | |
| ATTCCATATTGCCCACATGG+TGG | + | 6095:47086-47105 | None:intergenic | 45.0% | |
| CATGAGGCTTAAGTTCATCC+CGG | + | 6095:46344-46363 | None:intergenic | 45.0% | |
| CATTCCATCACACAAACCAC+CGG | + | 6095:46881-46900 | None:intergenic | 45.0% | |
| CTACCGCACATGTCTCTAAA+AGG | + | 6095:46714-46733 | None:intergenic | 45.0% | |
| GGAATGGTTCTTGCAGTTGT+CGG | - | 6095:48174-48193 | MS.gene24633:intron | 45.0% | |
| TAAGCCAGTACCTCTGCATT+GGG | - | 6095:48043-48062 | MS.gene24633:intron | 45.0% | |
| TCGGTCATGGTTGTGGTTAT+TGG | - | 6095:46941-46960 | MS.gene24633:intron | 45.0% | |
| TGTTCATCAGCACTATTCGC+TGG | + | 6095:47468-47487 | None:intergenic | 45.0% | |
| ! | AGATTTCCCAGGTTTTCCAC+TGG | + | 6095:46515-46534 | None:intergenic | 45.0% |
| ! | CTCAAGGGAAGTGAAAGTGT+CGG | - | 6095:46922-46941 | MS.gene24633:intron | 45.0% |
| ! | GCAGTTTCCTTCCAGGTTTT+AGG | - | 6095:48075-48094 | MS.gene24633:intron | 45.0% |
| ! | TATGTGTTCTGACTTTGGGG+TGG | - | 6095:48112-48131 | MS.gene24633:intron | 45.0% |
| ! | TGAGTTGGACCGAAATATGG+TGG | - | 6095:46570-46589 | MS.gene24633:intron | 45.0% |
| ACTACAGCCAGTGGAAAACC+TGG | - | 6095:46505-46524 | MS.gene24633:CDS | 50.0% | |
| AGCCTCATGCTCAATTCCGT+TGG | - | 6095:46355-46374 | MS.gene24633:CDS | 50.0% | |
| AGTCAGATCACTACAGCCAG+TGG | - | 6095:46496-46515 | MS.gene24633:CDS | 50.0% | |
| CATGTGGCCTAAAACCTGGA+AGG | + | 6095:48085-48104 | None:intergenic | 50.0% | |
| CTACAGCCAGTGGAAAACCT+GGG | - | 6095:46506-46525 | MS.gene24633:CDS | 50.0% | |
| CTTAACCCACTAACCGGAGT+CGG | + | 6095:46635-46654 | None:intergenic | 50.0% | |
| CTTCTCAGCAGTTTCCTTCC+AGG | - | 6095:48068-48087 | MS.gene24633:intron | 50.0% | |
| GGACTCGTCTCAAATGCTAC+CGG | - | 6095:46247-46266 | MS.gene24633:CDS | 50.0% | |
| GTAAGCCAGTACCTCTGCAT+TGG | - | 6095:48042-48061 | MS.gene24633:intron | 50.0% | |
| GTTCCACCATGTGGGCAATA+TGG | - | 6095:47080-47099 | MS.gene24633:intron | 50.0% | |
| TGAGGGAGAGTCTTCGCATT+TGG | + | 6095:48240-48259 | None:intergenic | 50.0% | |
| ! | CGGTGGTTTGTGTGATGGAA+TGG | - | 6095:46879-46898 | MS.gene24633:intron | 50.0% |
| ! | GATTCCGGTGGTTTGTGTGA+TGG | - | 6095:46874-46893 | MS.gene24633:intron | 50.0% |
| ! | TTGATCCATGTAGCCGACTC+CGG | - | 6095:46619-46638 | MS.gene24633:intron | 50.0% |
| !! | GAAAGTGTCGGTCATGGTTG+TGG | - | 6095:46934-46953 | MS.gene24633:intron | 50.0% |
| !! | GGAAGTGAAAGTGTCGGTCA+TGG | - | 6095:46928-46947 | MS.gene24633:intron | 50.0% |
| ACTAACCGGAGTCGGCTACA+TGG | + | 6095:46627-46646 | None:intergenic | 55.0% | |
| GGTTCTTGCAGTTGTCGGCA+TGG | - | 6095:48179-48198 | MS.gene24633:CDS | 55.0% | |
| ! | ATGTAGCCGACTCCGGTTAG+TGG | - | 6095:46626-46645 | MS.gene24633:intron | 55.0% |
| ! | TGTAGCCGACTCCGGTTAGT+GGG | - | 6095:46627-46646 | MS.gene24633:intron | 55.0% |
| !! | CGACTCCGGTTAGTGGGTTA+AGG | - | 6095:46633-46652 | MS.gene24633:intron | 55.0% |
| ! | AGCGCCCAATGCAGAGGTAC+TGG | + | 6095:48050-48069 | None:intergenic | 60.0% |
| !! | CTGAGAAGCGCCCAATGCAG+AGG | + | 6095:48056-48075 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 6095 | gene | 46203 | 48359 | 46203 | ID=MS.gene24633 |
| 6095 | mRNA | 46203 | 48359 | 46203 | ID=MS.gene24633.t1;Parent=MS.gene24633 |
| 6095 | exon | 48175 | 48359 | 48175 | ID=MS.gene24633.t1.exon1;Parent=MS.gene24633.t1 |
| 6095 | CDS | 48175 | 48359 | 48175 | ID=cds.MS.gene24633.t1;Parent=MS.gene24633.t1 |
| 6095 | exon | 47529 | 47705 | 47529 | ID=MS.gene24633.t1.exon2;Parent=MS.gene24633.t1 |
| 6095 | CDS | 47529 | 47705 | 47529 | ID=cds.MS.gene24633.t1;Parent=MS.gene24633.t1 |
| 6095 | exon | 46679 | 46840 | 46679 | ID=MS.gene24633.t1.exon3;Parent=MS.gene24633.t1 |
| 6095 | CDS | 46679 | 46840 | 46679 | ID=cds.MS.gene24633.t1;Parent=MS.gene24633.t1 |
| 6095 | exon | 46203 | 46562 | 46203 | ID=MS.gene24633.t1.exon4;Parent=MS.gene24633.t1 |
| 6095 | CDS | 46203 | 46562 | 46203 | ID=cds.MS.gene24633.t1;Parent=MS.gene24633.t1 |
| Gene Sequence |
| Protein sequence |
