Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28167.t1 | XP_003630134.1 | 98.6 | 645 | 8 | 1 | 1 | 644 | 1 | 645 | 0.00E+00 | 1290.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28167.t1 | Q6H6N5 | 76.5 | 562 | 113 | 4 | 84 | 644 | 63 | 606 | 1.8e-257 | 889.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28167.t1 | G7LBD0 | 98.6 | 645 | 8 | 1 | 1 | 644 | 1 | 645 | 0.0e+00 | 1290.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene28167 | 0.895668 | 7.70E-76 | -1.69E-46 |
| MS.gene049369 | MS.gene28167 | 0.893811 | 4.44E-75 | -1.69E-46 |
| MS.gene049396 | MS.gene28167 | 0.818748 | 1.67E-52 | -1.69E-46 |
| MS.gene049480 | MS.gene28167 | 0.816459 | 5.47E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene28167 | 0.823804 | 1.14E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene28167 | 0.807256 | 5.52E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene28167 | 0.818447 | 1.95E-52 | -1.69E-46 |
| MS.gene050553 | MS.gene28167 | 0.823622 | 1.25E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene28167 | 0.819114 | 1.38E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene28167 | 0.849606 | 2.90E-60 | -1.69E-46 |
| MS.gene050747 | MS.gene28167 | 0.814587 | 1.43E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene28167 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene28167 | 0.802205 | 6.27E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene28167 | 0.827983 | 1.16E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene28167 | 0.814208 | 1.73E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene28167 | 0.856055 | 4.17E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene28167 | 0.828917 | 6.88E-55 | -1.69E-46 |
| MS.gene051521 | MS.gene28167 | 0.825371 | 4.86E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene28167 | 0.824984 | 6.00E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene28167 | 0.804833 | 1.79E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene28167 | 0.812171 | 4.85E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene28167 | 0.818684 | 1.72E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene28167 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene28167 | 0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene28167 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene28167 | 0.887432 | 1.43E-72 | -1.69E-46 |
| MS.gene052253 | MS.gene28167 | 0.81957 | 1.08E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene28167 | 0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene28167 | 0.845553 | 3.78E-59 | -1.69E-46 |
| MS.gene052414 | MS.gene28167 | 0.852973 | 3.25E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene28167 | 0.829466 | 5.07E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene28167 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene28167 | 0.809772 | 1.60E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene28167 | 0.829967 | 3.83E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene28167 | 0.843076 | 1.75E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene28167 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene28167 | 0.813066 | 3.09E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene28167 | 0.851604 | 7.96E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene28167 | 0.886062 | 4.74E-72 | -1.69E-46 |
| MS.gene053557 | MS.gene28167 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene053758 | MS.gene28167 | 0.830538 | 2.78E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene28167 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene28167 | 0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene28167 | 0.880579 | 4.89E-70 | -1.69E-46 |
| MS.gene054123 | MS.gene28167 | 0.846009 | 2.84E-59 | -1.69E-46 |
| MS.gene054349 | MS.gene28167 | 0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene28167 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene28167 | 0.826611 | 2.47E-54 | -1.69E-46 |
| MS.gene054955 | MS.gene28167 | 0.833968 | 3.93E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene28167 | 0.833334 | 5.66E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene28167 | 0.808247 | 3.40E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene28167 | 0.807869 | 4.09E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene28167 | 0.819908 | 9.07E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene28167 | 0.850453 | 1.68E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene28167 | 0.81567 | 8.21E-52 | -1.69E-46 |
| MS.gene05556 | MS.gene28167 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene055666 | MS.gene28167 | 0.800416 | 1.46E-48 | -1.69E-46 |
| MS.gene055722 | MS.gene28167 | 0.80488 | 1.75E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene28167 | 0.828933 | 6.82E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene28167 | 0.831966 | 1.24E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene28167 | 0.854779 | 9.81E-62 | -1.69E-46 |
| MS.gene055911 | MS.gene28167 | 0.856222 | 3.72E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene28167 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene28167 | 0.822284 | 2.57E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene28167 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene28167 | 0.858133 | 1.02E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene28167 | 0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene28167 | 0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene28167 | 0.80088 | 1.17E-48 | -1.69E-46 |
| MS.gene05666 | MS.gene28167 | 0.80179 | 7.63E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene28167 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene28167 | 0.811459 | 6.93E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene28167 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene28167 | 0.833229 | 6.01E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene28167 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene28167 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene28167 | 0.833294 | 5.79E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene28167 | 0.847716 | 9.70E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene28167 | 0.837379 | 5.38E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene28167 | 0.846374 | 2.26E-59 | -1.69E-46 |
| MS.gene057537 | MS.gene28167 | 0.856135 | 3.95E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene28167 | 0.85037 | 1.77E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene28167 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene28167 | 0.825351 | 4.92E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene28167 | 0.806463 | 8.13E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene28167 | 0.82261 | 2.16E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene28167 | 0.858014 | 1.10E-62 | -1.69E-46 |
| MS.gene058075 | MS.gene28167 | 0.815725 | 7.98E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene28167 | 0.816201 | 6.25E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene28167 | 0.888292 | 6.72E-73 | -1.69E-46 |
| MS.gene058376 | MS.gene28167 | 0.806996 | 6.27E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene28167 | 0.81123 | 7.77E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene28167 | 0.833667 | 4.68E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene28167 | 0.871097 | 8.86E-67 | -1.69E-46 |
| MS.gene058928 | MS.gene28167 | 0.868513 | 6.18E-66 | -1.69E-46 |
| MS.gene058948 | MS.gene28167 | 0.856933 | 2.30E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene28167 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene28167 | 0.833245 | 5.96E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene28167 | 0.872433 | 3.19E-67 | -1.69E-46 |
| MS.gene059368 | MS.gene28167 | 0.821889 | 3.17E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene28167 | 0.826968 | 2.03E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene28167 | 0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene28167 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene28167 | 0.833596 | 4.87E-56 | -1.69E-46 |
| MS.gene05959 | MS.gene28167 | 0.833841 | 4.23E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene28167 | 0.864366 | 1.28E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene28167 | 0.850276 | 1.89E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene28167 | 0.844302 | 8.23E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene28167 | 0.829335 | 5.45E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene28167 | 0.827964 | 1.17E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene28167 | 0.853286 | 2.64E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene28167 | 0.892109 | 2.15E-74 | -1.69E-46 |
| MS.gene05986 | MS.gene28167 | 0.832016 | 1.20E-55 | -1.69E-46 |
| MS.gene060247 | MS.gene28167 | 0.813452 | 2.54E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene28167 | 0.813337 | 2.69E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene28167 | 0.809781 | 1.60E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene28167 | 0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene28167 | 0.851288 | 9.78E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene28167 | 0.81224 | 4.68E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene28167 | 0.883703 | 3.58E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene28167 | 0.831051 | 2.08E-55 | -1.69E-46 |
| MS.gene060981 | MS.gene28167 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene28167 | 0.823671 | 1.22E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene28167 | 0.841065 | 5.95E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene28167 | -0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene28167 | 0.848963 | 4.38E-60 | -1.69E-46 |
| MS.gene061159 | MS.gene28167 | 0.818383 | 2.02E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28167.t1 | MTR_8g092170 | 98.605 | 645 | 8 | 1 | 1 | 644 | 1 | 645 | 0.0 | 1321 |
| MS.gene28167.t1 | MTR_1g084610 | 73.362 | 473 | 122 | 2 | 164 | 636 | 113 | 581 | 0.0 | 761 |
| MS.gene28167.t1 | MTR_4g123030 | 67.969 | 512 | 159 | 2 | 129 | 635 | 147 | 658 | 0.0 | 758 |
| MS.gene28167.t1 | MTR_7g111890 | 60.653 | 582 | 210 | 7 | 67 | 644 | 43 | 609 | 0.0 | 733 |
| MS.gene28167.t1 | MTR_4g123030 | 71.285 | 397 | 112 | 1 | 129 | 523 | 147 | 543 | 0.0 | 616 |
| MS.gene28167.t1 | MTR_1g096140 | 56.933 | 476 | 199 | 2 | 146 | 620 | 73 | 543 | 0.0 | 585 |
| MS.gene28167.t1 | MTR_3g117710 | 55.852 | 487 | 209 | 2 | 134 | 620 | 81 | 561 | 0.0 | 583 |
| MS.gene28167.t1 | MTR_1g095970 | 58.515 | 458 | 184 | 2 | 164 | 620 | 89 | 541 | 0.0 | 579 |
| MS.gene28167.t1 | MTR_4g075540 | 56.511 | 407 | 171 | 2 | 164 | 570 | 51 | 451 | 2.12e-171 | 496 |
| MS.gene28167.t1 | MTR_3g015100 | 69.935 | 153 | 46 | 0 | 371 | 523 | 1 | 153 | 1.76e-77 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28167.t1 | AT5G22510 | 69.337 | 649 | 160 | 7 | 3 | 644 | 1 | 617 | 0.0 | 904 |
| MS.gene28167.t1 | AT5G22510 | 69.337 | 649 | 160 | 7 | 3 | 644 | 1 | 617 | 0.0 | 904 |
| MS.gene28167.t1 | AT1G56560 | 74.348 | 460 | 116 | 1 | 162 | 621 | 132 | 589 | 0.0 | 767 |
| MS.gene28167.t1 | AT3G06500 | 67.433 | 522 | 160 | 3 | 125 | 637 | 134 | 654 | 0.0 | 763 |
| MS.gene28167.t1 | AT3G05820 | 68.031 | 513 | 159 | 3 | 125 | 635 | 112 | 621 | 0.0 | 754 |
| MS.gene28167.t1 | AT3G06500 | 71.638 | 409 | 115 | 1 | 229 | 637 | 48 | 455 | 0.0 | 652 |
| MS.gene28167.t1 | AT3G05820 | 71.072 | 401 | 111 | 3 | 125 | 523 | 112 | 509 | 0.0 | 614 |
| MS.gene28167.t1 | AT4G09510 | 59.737 | 457 | 179 | 1 | 164 | 620 | 95 | 546 | 0.0 | 604 |
| MS.gene28167.t1 | AT1G35580 | 60.573 | 454 | 174 | 1 | 164 | 617 | 87 | 535 | 0.0 | 601 |
| MS.gene28167.t1 | AT1G35580 | 60.573 | 454 | 174 | 1 | 164 | 617 | 87 | 535 | 0.0 | 601 |
| MS.gene28167.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 164 | 628 | 109 | 567 | 0.0 | 595 |
| MS.gene28167.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 164 | 628 | 109 | 567 | 0.0 | 595 |
| MS.gene28167.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 164 | 628 | 109 | 567 | 0.0 | 595 |
| MS.gene28167.t1 | AT1G22650 | 59.251 | 454 | 180 | 1 | 164 | 617 | 72 | 520 | 0.0 | 586 |
| MS.gene28167.t1 | AT1G72000 | 57.082 | 466 | 195 | 1 | 155 | 620 | 28 | 488 | 0.0 | 575 |
| MS.gene28167.t1 | AT4G09510 | 60.647 | 371 | 141 | 1 | 164 | 534 | 95 | 460 | 9.74e-171 | 495 |
| MS.gene28167.t1 | AT1G35580 | 60.160 | 374 | 144 | 1 | 164 | 537 | 87 | 455 | 3.15e-169 | 491 |
| MS.gene28167.t1 | AT1G22650 | 58.760 | 371 | 148 | 1 | 164 | 534 | 72 | 437 | 6.82e-164 | 478 |
Find 149 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATTAGAGAATATTAT+TGG | 0.190575 | 4.4:+9575879 | MS.gene28167:CDS |
| TTCCTCCCGCGCTTTCCTTT+TGG | 0.191105 | 4.4:-9576947 | None:intergenic |
| CTCTGCAACAGAAGAGGTTT+TGG | 0.280737 | 4.4:+9573618 | MS.gene28167:CDS |
| TTTAAAACCACCATGTCTTT+AGG | 0.281032 | 4.4:+9572006 | None:intergenic |
| CGGGCATCCTTTGGAGATTC+AGG | 0.282200 | 4.4:+9573983 | MS.gene28167:CDS |
| ATCAGTATGTTTGCTTTACT+TGG | 0.283665 | 4.4:-9576878 | None:intergenic |
| AATTATTGTGGGAATCCTAT+TGG | 0.285852 | 4.4:+9572540 | MS.gene28167:CDS |
| TTCAAAACATTGGTACTGTT+TGG | 0.308716 | 4.4:-9572582 | None:intergenic |
| CTCTGGGGATTTATCTGTTC+AGG | 0.310355 | 4.4:+9573833 | MS.gene28167:CDS |
| ATGGATCAGCTGATCTTATA+CGG | 0.322618 | 4.4:+9575825 | MS.gene28167:CDS |
| AACAAAGGAGGCTACTTAAT+TGG | 0.324104 | 4.4:+9576025 | MS.gene28167:CDS |
| TAGATGCAGTACGTGTTCTT+AGG | 0.326966 | 4.4:-9576256 | None:intergenic |
| AACCAGCTCACATGGATTTC+CGG | 0.330359 | 4.4:+9576056 | MS.gene28167:CDS |
| CCAGATTTCTCCTTGGTTAG+TGG | 0.330635 | 4.4:+9575991 | MS.gene28167:CDS |
| TGAGGCCAAATGGTCGGATT+TGG | 0.332213 | 4.4:+9576159 | MS.gene28167:CDS |
| CGTGTTGCTCCTGTTGATTC+CGG | 0.364802 | 4.4:+9573670 | MS.gene28167:CDS |
| GGGCATACACGGGCATCCTT+TGG | 0.367981 | 4.4:+9573974 | MS.gene28167:CDS |
| TTGTCATCCAATGTTACAAA+TGG | 0.378488 | 4.4:+9572435 | MS.gene28167:CDS |
| GGCCTCAATAAGATCCAATA+TGG | 0.382722 | 4.4:-9576143 | None:intergenic |
| CTGGCCATCACTTCTCTGGC+AGG | 0.392960 | 4.4:+9576376 | MS.gene28167:CDS |
| GAAATCGATGAGGCCTTAAC+TGG | 0.399634 | 4.4:-9572185 | None:intergenic |
| GGAACAATCACATGCCATAT+TGG | 0.401885 | 4.4:+9576129 | MS.gene28167:CDS |
| GCCACTCAAGATTTGTTATC+CGG | 0.408700 | 4.4:+9576192 | MS.gene28167:CDS |
| ACGAAAAGATCTCGATTCAT+TGG | 0.409792 | 4.4:+9576785 | MS.gene28167:CDS |
| ATGGCCAGGAGCCTCCATTA+TGG | 0.412090 | 4.4:-9576361 | None:intergenic |
| TTTCAGACATGGTCAATTGC+GGG | 0.416114 | 4.4:+9576824 | MS.gene28167:CDS |
| CGAGCATATGGAAAATGCTC+TGG | 0.418767 | 4.4:+9573816 | MS.gene28167:CDS |
| TTTGCAGCAATAGTTCCAAT+AGG | 0.419547 | 4.4:-9572555 | None:intergenic |
| TATCATACTCTCCCTTCAAT+AGG | 0.421624 | 4.4:-9572653 | None:intergenic |
| GCTCCTGGCCATCACTTCTC+TGG | 0.423609 | 4.4:+9576372 | MS.gene28167:CDS |
| TGCCACCAAATCCGACCATT+TGG | 0.424995 | 4.4:-9576164 | None:intergenic |
| AACCAAGGAGAAATCTGGTC+TGG | 0.425338 | 4.4:-9575986 | None:intergenic |
| AGATGTTCAACTGTTGGAAC+AGG | 0.430733 | 4.4:+9572401 | MS.gene28167:CDS |
| ATTAAGTAGCCTCCTTTGTT+CGG | 0.435238 | 4.4:-9576022 | None:intergenic |
| AGGCCTTGGTCTTACCATAA+TGG | 0.446670 | 4.4:+9576347 | MS.gene28167:intron |
| TGGAGTCGCTTTCCTATTGA+AGG | 0.447362 | 4.4:+9572641 | MS.gene28167:CDS |
| ATTTGTTATCCGGCTCTTGA+AGG | 0.449396 | 4.4:+9576202 | MS.gene28167:CDS |
| TTATCCGGCTCTTGAAGGTC+AGG | 0.451665 | 4.4:+9576207 | MS.gene28167:CDS |
| TAAGGTTCGGACAGTTCCTC+TGG | 0.452150 | 4.4:+9573585 | MS.gene28167:CDS |
| GACTTTGGAGAGGCAGCCAT+TGG | 0.458365 | 4.4:+9573646 | MS.gene28167:CDS |
| TTGAAGCTTTGTCTTGCTGA+TGG | 0.459012 | 4.4:+9573891 | MS.gene28167:CDS |
| AATGTGAGCGGCATAACTTC+AGG | 0.459764 | 4.4:+9572288 | MS.gene28167:CDS |
| TTGATTAATGCCAACCCAAA+AGG | 0.460057 | 4.4:+9576932 | MS.gene28167:CDS |
| GAGAGAGTTGATGTGCAAAC+AGG | 0.461295 | 4.4:+9573855 | MS.gene28167:CDS |
| TTATACGGGCACTGAACAAT+CGG | 0.461373 | 4.4:+9575840 | MS.gene28167:CDS |
| GCATGCTTCAAAGCCAGTTA+AGG | 0.466120 | 4.4:+9572172 | MS.gene28167:CDS |
| GAGTCTGTAGTTAATTATTG+TGG | 0.473580 | 4.4:+9572528 | MS.gene28167:CDS |
| GGCCAAATGGTCGGATTTGG+TGG | 0.475817 | 4.4:+9576162 | MS.gene28167:CDS |
| TCTTCATACACTTCAGCTGC+AGG | 0.476188 | 4.4:+9572692 | MS.gene28167:CDS |
| CATTTACATGTTTGCAACCA+TGG | 0.477529 | 4.4:-9572252 | None:intergenic |
| CCACTAACCAAGGAGAAATC+TGG | 0.479615 | 4.4:-9575991 | None:intergenic |
| TCAGTATGTTTGCTTTACTT+GGG | 0.481398 | 4.4:-9576877 | None:intergenic |
| ATGGCTGCCTCTCCAAAGTC+AGG | 0.485283 | 4.4:-9573643 | None:intergenic |
| GTTTGAAGATGTTCAACTGT+TGG | 0.485786 | 4.4:+9572395 | MS.gene28167:CDS |
| CAGAAACTGACACTGGTCAA+TGG | 0.486730 | 4.4:-9572207 | None:intergenic |
| CCATCAGTTACTAATAATGT+TGG | 0.490435 | 4.4:-9573927 | None:intergenic |
| AGTCTGTAGTTAATTATTGT+GGG | 0.491436 | 4.4:+9572529 | MS.gene28167:CDS |
| TGTCATCCAATGTTACAAAT+GGG | 0.492423 | 4.4:+9572436 | MS.gene28167:CDS |
| CAGGAGACGGTAATGGATCA+AGG | 0.493037 | 4.4:+9572307 | MS.gene28167:CDS |
| TTTCTCCTTGGTTAGTGGAG+TGG | 0.493135 | 4.4:+9575996 | MS.gene28167:CDS |
| TTGCAACCATGGATGACTAT+AGG | 0.493206 | 4.4:-9572241 | None:intergenic |
| GGCAGTCCCATTTGTAACAT+TGG | 0.495902 | 4.4:-9572442 | None:intergenic |
| GTGGTCTGTTGTCAGTAGTA+TGG | 0.495960 | 4.4:+9576099 | MS.gene28167:CDS |
| AACTGGGAAGTGTTGACAAA+AGG | 0.497494 | 4.4:-9572090 | None:intergenic |
| CTGCCAGAGAAGTGATGGCC+AGG | 0.502165 | 4.4:-9576375 | None:intergenic |
| TGGATCTTATTGAGGCCAAA+TGG | 0.504361 | 4.4:+9576149 | MS.gene28167:CDS |
| GAGCATATGGAAAATGCTCT+GGG | 0.507897 | 4.4:+9573817 | MS.gene28167:CDS |
| CATCAGTTACTAATAATGTT+GGG | 0.514916 | 4.4:-9573926 | None:intergenic |
| TGCCATATTGGATCTTATTG+AGG | 0.522196 | 4.4:+9576141 | MS.gene28167:CDS |
| ACCCAGACCAGATTTCTCCT+TGG | 0.522729 | 4.4:+9575984 | MS.gene28167:CDS |
| CACTCCTGACCTTCAAGAGC+CGG | 0.522930 | 4.4:-9576211 | None:intergenic |
| TATTGGAACTATTGCTGCAA+AGG | 0.528262 | 4.4:+9572557 | MS.gene28167:CDS |
| CCAACATTATTAGTAACTGA+TGG | 0.529599 | 4.4:+9573927 | MS.gene28167:CDS |
| CTCTATTGAGGAAGAAGCGT+GGG | 0.531182 | 4.4:+9572494 | MS.gene28167:CDS |
| GGCTCATTATACGCGGATTG+AGG | 0.533659 | 4.4:-9572069 | None:intergenic |
| ACCAAGGAGAAATCTGGTCT+GGG | 0.534821 | 4.4:-9575985 | None:intergenic |
| GCAGGCATCAAACCTTGTCC+TGG | 0.538634 | 4.4:-9573556 | None:intergenic |
| AACCGGAAATCCATGTGAGC+TGG | 0.541172 | 4.4:-9576058 | None:intergenic |
| ACCCAAAAGGAAAGCGCGGG+AGG | 0.541698 | 4.4:+9576945 | MS.gene28167:CDS |
| GCAAACATGTAAATGCCAAA+AGG | 0.541761 | 4.4:+9572260 | MS.gene28167:CDS |
| CATCTCACGTGCACAACGTA+AGG | 0.542973 | 4.4:-9575789 | None:intergenic |
| TAACTTACAACCAGCTCACA+TGG | 0.546165 | 4.4:+9576048 | MS.gene28167:CDS |
| AAACATACTGATAACTGAAG+AGG | 0.547667 | 4.4:+9576889 | MS.gene28167:CDS |
| AGATCAGCTGATCCATCCTC+AGG | 0.548249 | 4.4:-9575818 | None:intergenic |
| AATAGGAAAGCGACTCCAGA+TGG | 0.548635 | 4.4:-9572636 | None:intergenic |
| AATTAGCCTCAACTCTATTG+AGG | 0.549466 | 4.4:+9572482 | MS.gene28167:CDS |
| GTCCGAACCTTAAAACTAGC+AGG | 0.549954 | 4.4:-9573574 | None:intergenic |
| CAGGAGTGGCAGATAATCAC+TGG | 0.554473 | 4.4:+9576226 | MS.gene28167:CDS |
| AACAGGAGCAACACGGCCAA+TGG | 0.563132 | 4.4:-9573662 | None:intergenic |
| GTTTCAGACATGGTCAATTG+CGG | 0.565248 | 4.4:+9576823 | MS.gene28167:CDS |
| ATAACTTCAGGAGACGGTAA+TGG | 0.567558 | 4.4:+9572300 | MS.gene28167:CDS |
| GATCGAAGGATGGGCATACA+CGG | 0.567712 | 4.4:+9573963 | MS.gene28167:CDS |
| AGAAAAGATCCTCAAGGCAT+AGG | 0.570915 | 4.4:+9572130 | MS.gene28167:CDS |
| ACAATGGATTGTCATAGTCC+AGG | 0.574008 | 4.4:+9573538 | MS.gene28167:CDS |
| TTGGTCATAATTCAAAACAT+TGG | 0.578110 | 4.4:-9572592 | None:intergenic |
| CCAACCCAAAAGGAAAGCGC+GGG | 0.582506 | 4.4:+9576942 | MS.gene28167:CDS |
| GCCAACCCAAAAGGAAAGCG+CGG | 0.585494 | 4.4:+9576941 | MS.gene28167:CDS |
| CTTACCATAATGGAGGCTCC+TGG | 0.587241 | 4.4:+9576357 | MS.gene28167:CDS |
| CAAACCTGCCAGAGAAGTGA+TGG | 0.587691 | 4.4:-9576380 | None:intergenic |
| ACGGGCACTGAACAATCGGC+TGG | 0.589732 | 4.4:+9575844 | MS.gene28167:CDS |
| TGGATCAGCTGATCTTATAC+GGG | 0.592987 | 4.4:+9575826 | MS.gene28167:CDS |
| CAAGCAGCAGCTTTGACACA+AGG | 0.593252 | 4.4:-9576850 | None:intergenic |
| CTTCTTCCTCAATAGAGTTG+AGG | 0.599582 | 4.4:-9572488 | None:intergenic |
| TCTTATTGAGGCCAAATGGT+CGG | 0.600264 | 4.4:+9576153 | MS.gene28167:CDS |
| ATCGAAGACTCATACAATGT+AGG | 0.603716 | 4.4:-9576984 | None:intergenic |
| TTGCATGATAGATCGAAGGA+TGG | 0.604658 | 4.4:+9573953 | MS.gene28167:CDS |
| ATCGAAGGATGGGCATACAC+GGG | 0.608184 | 4.4:+9573964 | MS.gene28167:CDS |
| AGCGGCATAACTTCAGGAGA+CGG | 0.611888 | 4.4:+9572294 | MS.gene28167:CDS |
| ATAAGACCTATAGTCATCCA+TGG | 0.612582 | 4.4:+9572235 | MS.gene28167:CDS |
| GGAGTCGCTTTCCTATTGAA+GGG | 0.613769 | 4.4:+9572642 | MS.gene28167:CDS |
| TCAGAGCTGGGAGAAAACAA+TGG | 0.616598 | 4.4:+9573522 | MS.gene28167:intron |
| TAAAATCACGAATAAAGACT+TGG | 0.617406 | 4.4:-9572611 | None:intergenic |
| GAGATGCTTACTCCTGAGGA+TGG | 0.617558 | 4.4:+9575806 | MS.gene28167:CDS |
| TGATGACTCTGCAACAGAAG+AGG | 0.617863 | 4.4:+9573612 | MS.gene28167:CDS |
| GAGTGGATGCCGAACAAAGG+AGG | 0.619198 | 4.4:+9576013 | MS.gene28167:CDS |
| AAGAAGCGTGGGATCTACTG+AGG | 0.619813 | 4.4:+9572505 | MS.gene28167:CDS |
| TGCATGATAGATCGAAGGAT+GGG | 0.624079 | 4.4:+9573954 | MS.gene28167:CDS |
| AACATGTGATCTCAGGGCTG+TGG | 0.624246 | 4.4:+9573778 | MS.gene28167:intron |
| GTGGAGTGGATGCCGAACAA+AGG | 0.624360 | 4.4:+9576010 | MS.gene28167:CDS |
| CGCGGATTGAGGAACAACAC+TGG | 0.624803 | 4.4:-9572058 | None:intergenic |
| ATGTGATCTCAGGGCTGTGG+TGG | 0.627914 | 4.4:+9573781 | MS.gene28167:intron |
| GTTCGGACAGTTCCTCTGGA+AGG | 0.631939 | 4.4:+9573589 | MS.gene28167:CDS |
| AGTCTCAGTTGTTTCAGACA+TGG | 0.632889 | 4.4:+9576813 | MS.gene28167:CDS |
| GTAAACACCTGAATCTCCAA+AGG | 0.633620 | 4.4:-9573990 | None:intergenic |
| GACGTATATCAAGAGACAAG+TGG | 0.638198 | 4.4:+9576747 | MS.gene28167:CDS |
| AGTACTCCTCTGTCTTGTAA+CGG | 0.638711 | 4.4:-9575931 | None:intergenic |
| TTTGGATCCTGACTTTGGAG+AGG | 0.640365 | 4.4:+9573636 | MS.gene28167:CDS |
| GTTCTTGCATGATAGATCGA+AGG | 0.640874 | 4.4:+9573949 | MS.gene28167:CDS |
| GCCGGATAACAAATCTTGAG+TGG | 0.648159 | 4.4:-9576193 | None:intergenic |
| CCTTGGTCTTACCATAATGG+AGG | 0.649693 | 4.4:+9576350 | MS.gene28167:CDS |
| AGAAGCGTGGGATCTACTGA+GGG | 0.653271 | 4.4:+9572506 | MS.gene28167:CDS |
| GGCATCCACTCCACTAACCA+AGG | 0.654302 | 4.4:-9576001 | None:intergenic |
| ATATGAAGAAAAGATCCTCA+AGG | 0.656314 | 4.4:+9572124 | MS.gene28167:CDS |
| CGGCTCTTGAAGGTCAGGAG+TGG | 0.658366 | 4.4:+9576212 | MS.gene28167:CDS |
| GATTGTCATAGTCCAGGACA+AGG | 0.659837 | 4.4:+9573544 | MS.gene28167:CDS |
| CGGAATCAACAGGAGCAACA+CGG | 0.660716 | 4.4:-9573669 | None:intergenic |
| TTTGGAAGCACCTAAAGACA+TGG | 0.673157 | 4.4:-9572016 | None:intergenic |
| ATAGTCACAGAAACTGACAC+TGG | 0.676501 | 4.4:-9572214 | None:intergenic |
| GACAAAAGGCTCATTATACG+CGG | 0.677479 | 4.4:-9572076 | None:intergenic |
| AATTTACCGTTACAAGACAG+AGG | 0.684719 | 4.4:+9575925 | MS.gene28167:CDS |
| GGCATGTGATTGTTCCTCTG+TGG | 0.685624 | 4.4:-9576122 | None:intergenic |
| CAAAAGGCTGAAAATGTGAG+CGG | 0.689069 | 4.4:+9572276 | MS.gene28167:CDS |
| ACTCTATTGAGGAAGAAGCG+TGG | 0.689990 | 4.4:+9572493 | MS.gene28167:CDS |
| GCAGAGTCATCACCTTCCAG+AGG | 0.695873 | 4.4:-9573601 | None:intergenic |
| CTGGTCAATGGAAATCGATG+AGG | 0.704773 | 4.4:-9572195 | None:intergenic |
| ACGTGAGATGCTTACTCCTG+AGG | 0.707533 | 4.4:+9575802 | MS.gene28167:CDS |
| CCTCCATTATGGTAAGACCA+AGG | 0.711037 | 4.4:-9576350 | None:intergenic |
| TGTCAGTAGTATGGCCACAG+AGG | 0.719456 | 4.4:+9576108 | MS.gene28167:CDS |
| AGCATATGGAAAATGCTCTG+GGG | 0.753456 | 4.4:+9573818 | MS.gene28167:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATGAAAAAGATTTAAT+AGG | - | chr4.4:9576555-9576574 | None:intergenic | 10.0% |
| !!! | TGAAAGATTTTTTATAAAAA+GGG | - | chr4.4:9572973-9572992 | None:intergenic | 10.0% |
| !!! | TTGAAAGATTTTTTATAAAA+AGG | - | chr4.4:9572974-9572993 | None:intergenic | 10.0% |
| !!! | TTTTATTTAATTTATTTTGC+AGG | + | chr4.4:9576327-9576346 | MS.gene28167:intron | 10.0% |
| !! | AAAACAAAATATAAAAAGCT+TGG | - | chr4.4:9574865-9574884 | None:intergenic | 15.0% |
| !! | AATAAACTAAATGCAATATA+AGG | + | chr4.4:9574482-9574501 | MS.gene28167:intron | 15.0% |
| !! | TGCAATCTAAAAATAAAATT+CGG | - | chr4.4:9576435-9576454 | None:intergenic | 15.0% |
| !! | TTCATATTAGAGAATATTAT+TGG | + | chr4.4:9575879-9575898 | MS.gene28167:CDS | 15.0% |
| !!! | TAAATAACTCTTTTCATTAA+AGG | + | chr4.4:9573365-9573384 | MS.gene28167:intron | 15.0% |
| !!! | TATTTAACTATTTCTTGTTA+AGG | + | chr4.4:9574045-9574064 | MS.gene28167:intron | 15.0% |
| !! | AAACTTAACATAATACTTCT+TGG | + | chr4.4:9573739-9573758 | MS.gene28167:intron | 20.0% |
| !! | AATTGTTGAAACTACAAAAA+AGG | + | chr4.4:9574593-9574612 | MS.gene28167:intron | 20.0% |
| !! | GCAATCTAAAAATAAAATTC+GGG | - | chr4.4:9576434-9576453 | None:intergenic | 20.0% |
| !! | TATCAGTAATATAAGAGTAA+GGG | - | chr4.4:9572722-9572741 | None:intergenic | 20.0% |
| !! | TGCATTTATTTAGATAGATT+GGG | + | chr4.4:9574110-9574129 | MS.gene28167:intron | 20.0% |
| !! | TTACAAGTTACAATTAAAGA+TGG | + | chr4.4:9575680-9575699 | MS.gene28167:intron | 20.0% |
| !! | TTTATAACATATTCCAAATC+TGG | + | chr4.4:9574506-9574525 | MS.gene28167:intron | 20.0% |
| !!! | ATATCTTTTTTATGCATGAA+AGG | + | chr4.4:9574316-9574335 | MS.gene28167:intron | 20.0% |
| !!! | ATTACTTAATGTTTTCATCA+AGG | - | chr4.4:9573132-9573151 | None:intergenic | 20.0% |
| !!! | CTGTCTTTTATTTTTGTTAA+TGG | + | chr4.4:9574249-9574268 | MS.gene28167:intron | 20.0% |
| !!! | TGTTTTATTTTTCTGTTTCT+AGG | + | chr4.4:9575751-9575770 | MS.gene28167:intron | 20.0% |
| !!! | TTTATTTTTGTTAATGGAGT+TGG | + | chr4.4:9574255-9574274 | MS.gene28167:intron | 20.0% |
| !!! | TTTTTTTTACCATTAACTGT+TGG | - | chr4.4:9574751-9574770 | None:intergenic | 20.0% |
| ! | AAGGTTTATTACTAAAGGAA+GGG | + | chr4.4:9573338-9573357 | MS.gene28167:intron | 25.0% |
| ! | AGTCTGTAGTTAATTATTGT+GGG | + | chr4.4:9572529-9572548 | MS.gene28167:CDS | 25.0% |
| ! | CATCAGTTACTAATAATGTT+GGG | - | chr4.4:9573929-9573948 | None:intergenic | 25.0% |
| ! | CATTAGTAATCTTTCATTGT+TGG | + | chr4.4:9573411-9573430 | MS.gene28167:intron | 25.0% |
| ! | CCTCTTTCTTTATATTGAAA+CGG | + | chr4.4:9575264-9575283 | MS.gene28167:intron | 25.0% |
| ! | CGTTTCAATATAAAGAAAGA+GGG | - | chr4.4:9575266-9575285 | None:intergenic | 25.0% |
| ! | CTATCAGTAATATAAGAGTA+AGG | - | chr4.4:9572723-9572742 | None:intergenic | 25.0% |
| ! | GAAAACAAAAAAACTCAAGA+GGG | - | chr4.4:9572951-9572970 | None:intergenic | 25.0% |
| ! | GAATTGTAATGACTAATGAA+TGG | - | chr4.4:9572882-9572901 | None:intergenic | 25.0% |
| ! | GTATTTATATAGCTTAACCA+AGG | - | chr4.4:9574835-9574854 | None:intergenic | 25.0% |
| ! | GTGCATTTATTTAGATAGAT+TGG | + | chr4.4:9574109-9574128 | MS.gene28167:intron | 25.0% |
| ! | GTTTCAATATAAAGAAAGAG+GGG | - | chr4.4:9575265-9575284 | None:intergenic | 25.0% |
| ! | TAAAATCACGAATAAAGACT+TGG | - | chr4.4:9572614-9572633 | None:intergenic | 25.0% |
| ! | TAAATAAATCTAACAGCAGT+GGG | - | chr4.4:9575221-9575240 | None:intergenic | 25.0% |
| ! | TACCACAAGAAAATACATAT+AGG | - | chr4.4:9573454-9573473 | None:intergenic | 25.0% |
| ! | TTAAATAAATCTAACAGCAG+TGG | - | chr4.4:9575222-9575241 | None:intergenic | 25.0% |
| ! | TTAATCCATTCAAATTCCTA+GGG | - | chr4.4:9574366-9574385 | None:intergenic | 25.0% |
| ! | TTATTTAACATGTGATCTCA+GGG | + | chr4.4:9573772-9573791 | MS.gene28167:intron | 25.0% |
| ! | TTGGTCATAATTCAAAACAT+TGG | - | chr4.4:9572595-9572614 | None:intergenic | 25.0% |
| ! | TTTAATCCATTCAAATTCCT+AGG | - | chr4.4:9574367-9574386 | None:intergenic | 25.0% |
| !! | AACTCTTTTCATTAAAGGAA+GGG | + | chr4.4:9573370-9573389 | MS.gene28167:intron | 25.0% |
| !! | TAACTCTTTTCATTAAAGGA+AGG | + | chr4.4:9573369-9573388 | MS.gene28167:intron | 25.0% |
| !!! | ATTATTTTACTACGAGCATA+TGG | + | chr4.4:9573804-9573823 | MS.gene28167:CDS | 25.0% |
| !!! | ATTTGAATGGATTAAAGATG+AGG | + | chr4.4:9574371-9574390 | MS.gene28167:intron | 25.0% |
| !!! | CTAATGAAAAGTGTCATTTA+AGG | - | chr4.4:9573397-9573416 | None:intergenic | 25.0% |
| !!! | CTTTTACTGTTTTGAAGTAA+AGG | + | chr4.4:9574674-9574693 | MS.gene28167:intron | 25.0% |
| !!! | GTTATTAGCAGTGTTTTTTT+AGG | - | chr4.4:9575552-9575571 | None:intergenic | 25.0% |
| !!! | GTTTTAACTTCCTGTTAAAT+GGG | + | chr4.4:9574880-9574899 | MS.gene28167:intron | 25.0% |
| !!! | TGTTTTAACTTCCTGTTAAA+TGG | + | chr4.4:9574879-9574898 | MS.gene28167:intron | 25.0% |
| !!! | TTTTAACTTCCTGTTAAATG+GGG | + | chr4.4:9574881-9574900 | MS.gene28167:intron | 25.0% |
| AAACATACTGATAACTGAAG+AGG | + | chr4.4:9576889-9576908 | MS.gene28167:CDS | 30.0% | |
| AACATATACAATTTCAGAGC+TGG | + | chr4.4:9573509-9573528 | MS.gene28167:intron | 30.0% | |
| AAGGTGAAATTACACAGATT+TGG | - | chr4.4:9574720-9574739 | None:intergenic | 30.0% | |
| AATTATTGTGGGAATCCTAT+TGG | + | chr4.4:9572540-9572559 | MS.gene28167:CDS | 30.0% | |
| AATTCAAACATGCAATGCTT+AGG | - | chr4.4:9576616-9576635 | None:intergenic | 30.0% | |
| ACAGATTATGATAAGAGCTA+AGG | - | chr4.4:9576532-9576551 | None:intergenic | 30.0% | |
| ACATATACAATTTCAGAGCT+GGG | + | chr4.4:9573510-9573529 | MS.gene28167:intron | 30.0% | |
| AGGACAAGGTTTATTACTAA+AGG | + | chr4.4:9573333-9573352 | MS.gene28167:intron | 30.0% | |
| AGGTGAAATTACACAGATTT+GGG | - | chr4.4:9574719-9574738 | None:intergenic | 30.0% | |
| AGGTTTATTACTAAAGGAAG+GGG | + | chr4.4:9573339-9573358 | MS.gene28167:intron | 30.0% | |
| AGTTTCCTAGTGAAAAAAAC+CGG | - | chr4.4:9576078-9576097 | None:intergenic | 30.0% | |
| ATATGAAGAAAAGATCCTCA+AGG | + | chr4.4:9572124-9572143 | MS.gene28167:CDS | 30.0% | |
| ATCAGTATGTTTGCTTTACT+TGG | - | chr4.4:9576881-9576900 | None:intergenic | 30.0% | |
| ATTCCGGTAAAATAACTGAT+AGG | + | chr4.4:9573686-9573705 | MS.gene28167:intron | 30.0% | |
| CAAGGTTTATTACTAAAGGA+AGG | + | chr4.4:9573337-9573356 | MS.gene28167:intron | 30.0% | |
| CCAACATTATTAGTAACTGA+TGG | + | chr4.4:9573927-9573946 | MS.gene28167:CDS | 30.0% | |
| CCATCAGTTACTAATAATGT+TGG | - | chr4.4:9573930-9573949 | None:intergenic | 30.0% | |
| CCGTTTCAATATAAAGAAAG+AGG | - | chr4.4:9575267-9575286 | None:intergenic | 30.0% | |
| CTAAAATCTACCATACTGAT+GGG | - | chr4.4:9574533-9574552 | None:intergenic | 30.0% | |
| CTTATTTAACATGTGATCTC+AGG | + | chr4.4:9573771-9573790 | MS.gene28167:intron | 30.0% | |
| GAGTCTGTAGTTAATTATTG+TGG | + | chr4.4:9572528-9572547 | MS.gene28167:CDS | 30.0% | |
| GGAAAACAAAAAAACTCAAG+AGG | - | chr4.4:9572952-9572971 | None:intergenic | 30.0% | |
| TAAAATCTACCATACTGATG+GGG | - | chr4.4:9574532-9574551 | None:intergenic | 30.0% | |
| TAACAGAAAAACATAAGCAG+AGG | - | chr4.4:9576287-9576306 | None:intergenic | 30.0% | |
| TAAGGTTAGACAAGAAACTT+TGG | + | chr4.4:9574063-9574082 | MS.gene28167:intron | 30.0% | |
| TATATTGAAACGGCACATTT+AGG | + | chr4.4:9575274-9575293 | MS.gene28167:intron | 30.0% | |
| TATTAAAAACCTATGCCTTG+AGG | - | chr4.4:9572142-9572161 | None:intergenic | 30.0% | |
| TATTACTGATAGCATGTTCT+TGG | + | chr4.4:9572731-9572750 | MS.gene28167:intron | 30.0% | |
| TCAGTATGTTTGCTTTACTT+GGG | - | chr4.4:9576880-9576899 | None:intergenic | 30.0% | |
| TGATGTTGAAAAATCTAGTC+TGG | + | chr4.4:9572338-9572357 | MS.gene28167:CDS | 30.0% | |
| TGTCATCCAATGTTACAAAT+GGG | + | chr4.4:9572436-9572455 | MS.gene28167:CDS | 30.0% | |
| TTAACTGTTGGAACTTACAA+AGG | - | chr4.4:9574739-9574758 | None:intergenic | 30.0% | |
| TTAGTAATAAACCTTGTCCT+GGG | - | chr4.4:9573333-9573352 | None:intergenic | 30.0% | |
| TTCAAAACAGTAAAAGCCAT+GGG | - | chr4.4:9574670-9574689 | None:intergenic | 30.0% | |
| TTCAAAACATTGGTACTGTT+TGG | - | chr4.4:9572585-9572604 | None:intergenic | 30.0% | |
| TTGTAAGTTCCAACAGTTAA+TGG | + | chr4.4:9574739-9574758 | MS.gene28167:intron | 30.0% | |
| TTGTAGTTTCAACAATTCAG+TGG | - | chr4.4:9574590-9574609 | None:intergenic | 30.0% | |
| TTGTCATCCAATGTTACAAA+TGG | + | chr4.4:9572435-9572454 | MS.gene28167:CDS | 30.0% | |
| TTTAGTAATAAACCTTGTCC+TGG | - | chr4.4:9573334-9573353 | None:intergenic | 30.0% | |
| TTTCATTGTTGGTACTTCTT+TGG | + | chr4.4:9573422-9573441 | MS.gene28167:intron | 30.0% | |
| ! | AATTGTACCAAGATTTTTCG+TGG | - | chr4.4:9572466-9572485 | None:intergenic | 30.0% |
| ! | ACTCTTTTCATTAAAGGAAG+GGG | + | chr4.4:9573371-9573390 | MS.gene28167:intron | 30.0% |
| ! | ATTCGTGATTTTATTCCATC+TGG | + | chr4.4:9572621-9572640 | MS.gene28167:CDS | 30.0% |
| ! | CATATATTTTGTTCGCAACT+GGG | - | chr4.4:9572109-9572128 | None:intergenic | 30.0% |
| ! | CTTTTCGTGTCATAATATTC+TGG | - | chr4.4:9576773-9576792 | None:intergenic | 30.0% |
| ! | GACCTATATGTATTTTCTTG+TGG | + | chr4.4:9573449-9573468 | MS.gene28167:intron | 30.0% |
| ! | GGAATTAAGAAAGTTGATTG+TGG | - | chr4.4:9573216-9573235 | None:intergenic | 30.0% |
| ! | GTTCCTTTTTCTTGTCAAAA+TGG | - | chr4.4:9574165-9574184 | None:intergenic | 30.0% |
| ! | TCATATATTTTGTTCGCAAC+TGG | - | chr4.4:9572110-9572129 | None:intergenic | 30.0% |
| ! | TCTAAAATCTACCATACTGA+TGG | - | chr4.4:9574534-9574553 | None:intergenic | 30.0% |
| !! | GATCCTATCAGTTATTTTAC+CGG | - | chr4.4:9573692-9573711 | None:intergenic | 30.0% |
| !! | TTGTTAATGGAGTTGGTATT+AGG | + | chr4.4:9574262-9574281 | MS.gene28167:intron | 30.0% |
| !!! | TTAATTTATTTTGCAGGCCT+TGG | + | chr4.4:9576333-9576352 | MS.gene28167:intron | 30.0% |
| !!! | TTGTTTCTGTTCTTGTTTTG+TGG | - | chr4.4:9575112-9575131 | None:intergenic | 30.0% |
| !!! | TTTTTTCACTAGGAAACTTG+TGG | + | chr4.4:9576080-9576099 | MS.gene28167:CDS | 30.0% |
| AAATCCTTTCATAGCTTAGC+TGG | + | chr4.4:9576582-9576601 | MS.gene28167:intron | 35.0% | |
| AACAAAGGAGGCTACTTAAT+TGG | + | chr4.4:9576025-9576044 | MS.gene28167:CDS | 35.0% | |
| AATTCCCGTGATTTACTCAA+CGG | + | chr4.4:9573230-9573249 | MS.gene28167:intron | 35.0% | |
| AATTTACCGTTACAAGACAG+AGG | + | chr4.4:9575925-9575944 | MS.gene28167:CDS | 35.0% | |
| ACATATTTCCATTGCCAAGA+AGG | - | chr4.4:9575345-9575364 | None:intergenic | 35.0% | |
| ACATTATCAAAAGCTTCCCA+TGG | + | chr4.4:9574651-9574670 | MS.gene28167:intron | 35.0% | |
| ACGAAAAGATCTCGATTCAT+TGG | + | chr4.4:9576785-9576804 | MS.gene28167:CDS | 35.0% | |
| AGATAGAACCATTCAGGATT+TGG | - | chr4.4:9575527-9575546 | None:intergenic | 35.0% | |
| ATAAGACCTATAGTCATCCA+TGG | + | chr4.4:9572235-9572254 | MS.gene28167:CDS | 35.0% | |
| ATATATCAGTGACAAAGCTG+TGG | + | chr4.4:9575479-9575498 | MS.gene28167:intron | 35.0% | |
| ATCACACTGTAAAATCGTGT+AGG | + | chr4.4:9574905-9574924 | MS.gene28167:intron | 35.0% | |
| ATGGATCAGCTGATCTTATA+CGG | + | chr4.4:9575825-9575844 | MS.gene28167:CDS | 35.0% | |
| ATGTGCCTCTGTCTAAATAT+AGG | + | chr4.4:9572924-9572943 | MS.gene28167:intron | 35.0% | |
| ATTAAGTAGCCTCCTTTGTT+CGG | - | chr4.4:9576025-9576044 | None:intergenic | 35.0% | |
| CAAAAGAGCAGTAGATACAA+AGG | + | chr4.4:9575051-9575070 | MS.gene28167:intron | 35.0% | |
| CACATCTCTTGACATAGATT+TGG | + | chr4.4:9574617-9574636 | MS.gene28167:intron | 35.0% | |
| CATTTACATGTTTGCAACCA+TGG | - | chr4.4:9572255-9572274 | None:intergenic | 35.0% | |
| CTAGTCACTACTAAGAAGAA+AGG | - | chr4.4:9574226-9574245 | None:intergenic | 35.0% | |
| CTTCAAAACAGTAAAAGCCA+TGG | - | chr4.4:9574671-9574690 | None:intergenic | 35.0% | |
| CTTTCTTCTTAGTAGTGACT+AGG | + | chr4.4:9574224-9574243 | MS.gene28167:intron | 35.0% | |
| GAAATAGATTGTATTGCCGT+TGG | + | chr4.4:9574444-9574463 | MS.gene28167:intron | 35.0% | |
| GCAAACATGTAAATGCCAAA+AGG | + | chr4.4:9572260-9572279 | MS.gene28167:CDS | 35.0% | |
| GCACATAGAGTTAGATTAGT+GGG | - | chr4.4:9572910-9572929 | None:intergenic | 35.0% | |
| GCATGCTAATGAATAAAGAC+AGG | - | chr4.4:9574021-9574040 | None:intergenic | 35.0% | |
| GGAATAGTAAGACATATACG+AGG | - | chr4.4:9574802-9574821 | None:intergenic | 35.0% | |
| GGTGAAATTACACAGATTTG+GGG | - | chr4.4:9574718-9574737 | None:intergenic | 35.0% | |
| GTTTGAAGATGTTCAACTGT+TGG | + | chr4.4:9572395-9572414 | MS.gene28167:CDS | 35.0% | |
| TAGGTAAGATAGAACCATTC+AGG | - | chr4.4:9575533-9575552 | None:intergenic | 35.0% | |
| TAGTAAGACATATACGAGGA+AGG | - | chr4.4:9574798-9574817 | None:intergenic | 35.0% | |
| TATCATACTCTCCCTTCAAT+AGG | - | chr4.4:9572656-9572675 | None:intergenic | 35.0% | |
| TATGAATAGAATAGTGTCCC+AGG | + | chr4.4:9573313-9573332 | MS.gene28167:intron | 35.0% | |
| TATTGGAACTATTGCTGCAA+AGG | + | chr4.4:9572557-9572576 | MS.gene28167:CDS | 35.0% | |
| TCAACGCTACTGATATTATC+AGG | + | chr4.4:9573009-9573028 | MS.gene28167:intron | 35.0% | |
| TGCCATATTGGATCTTATTG+AGG | + | chr4.4:9576141-9576160 | MS.gene28167:CDS | 35.0% | |
| TTATGCCCTAGGAATTTGAA+TGG | + | chr4.4:9574358-9574377 | MS.gene28167:intron | 35.0% | |
| TTCAAATTCCTAGGGCATAA+AGG | - | chr4.4:9574358-9574377 | None:intergenic | 35.0% | |
| TTGATTAATGCCAACCCAAA+AGG | + | chr4.4:9576932-9576951 | MS.gene28167:CDS | 35.0% | |
| TTTGCAGCAATAGTTCCAAT+AGG | - | chr4.4:9572558-9572577 | None:intergenic | 35.0% | |
| ! | AATTAGCCTCAACTCTATTG+AGG | + | chr4.4:9572482-9572501 | MS.gene28167:CDS | 35.0% |
| ! | AGTTTTCCTATGCTAGATTG+AGG | + | chr4.4:9574186-9574205 | MS.gene28167:intron | 35.0% |
| ! | GGGTGTGTTTGTGTTTATTT+TGG | - | chr4.4:9575196-9575215 | None:intergenic | 35.0% |
| ! | TTACCACAAGTCTTATCCAA+CGG | - | chr4.4:9574463-9574482 | None:intergenic | 35.0% |
| ! | TTGTAACTTGTAAGCATCTC+AGG | - | chr4.4:9575673-9575692 | None:intergenic | 35.0% |
| !! | GAATGGATTAAAGATGAGGT+GGG | + | chr4.4:9574375-9574394 | MS.gene28167:intron | 35.0% |
| !! | GCACCATTTTGACAAGAAAA+AGG | + | chr4.4:9574159-9574178 | MS.gene28167:intron | 35.0% |
| !! | GGTTTGTTACAATGACAGTT+TGG | + | chr4.4:9576397-9576416 | MS.gene28167:intron | 35.0% |
| !! | GTTATTTTACCGGAATCAAC+AGG | - | chr4.4:9573682-9573701 | None:intergenic | 35.0% |
| !! | TGAATGGATTAAAGATGAGG+TGG | + | chr4.4:9574374-9574393 | MS.gene28167:intron | 35.0% |
| !!! | GATTTCCGGTTTTTTTCACT+AGG | + | chr4.4:9576070-9576089 | MS.gene28167:CDS | 35.0% |
| !!! | TTTGATGCCTGCTAGTTTTA+AGG | + | chr4.4:9573567-9573586 | MS.gene28167:CDS | 35.0% |
| AAGAGCAAAACCAACGCAAA+AGG | + | chr4.4:9575144-9575163 | MS.gene28167:intron | 40.0% | |
| ACTGGACAGAACCTGAAAAA+CGG | - | chr4.4:9572043-9572062 | None:intergenic | 40.0% | |
| ACTGTTGGAACAGGAAAAAG+AGG | + | chr4.4:9572410-9572429 | MS.gene28167:CDS | 40.0% | |
| AGAAAAGATCCTCAAGGCAT+AGG | + | chr4.4:9572130-9572149 | MS.gene28167:CDS | 40.0% | |
| AGATGTTCAACTGTTGGAAC+AGG | + | chr4.4:9572401-9572420 | MS.gene28167:CDS | 40.0% | |
| AGCATATGGAAAATGCTCTG+GGG | + | chr4.4:9573818-9573837 | MS.gene28167:CDS | 40.0% | |
| AGGGCATAAAGGTTAATGTG+AGG | - | chr4.4:9574347-9574366 | None:intergenic | 40.0% | |
| AGGGTCCTATATTTAGACAG+AGG | - | chr4.4:9572932-9572951 | None:intergenic | 40.0% | |
| AGTACTCCTCTGTCTTGTAA+CGG | - | chr4.4:9575934-9575953 | None:intergenic | 40.0% | |
| AGTGTGATTCCCCATTTAAC+AGG | - | chr4.4:9574893-9574912 | None:intergenic | 40.0% | |
| ATAACTTCAGGAGACGGTAA+TGG | + | chr4.4:9572300-9572319 | MS.gene28167:CDS | 40.0% | |
| ATACAAAGGAGAGCCTCAAA+AGG | + | chr4.4:9575065-9575084 | MS.gene28167:intron | 40.0% | |
| ATAGTCACAGAAACTGACAC+TGG | - | chr4.4:9572217-9572236 | None:intergenic | 40.0% | |
| ATATAAAGAAAGAGGGGACG+TGG | - | chr4.4:9575259-9575278 | None:intergenic | 40.0% | |
| ATCGTGTAGGTGTGAATGAT+TGG | + | chr4.4:9574918-9574937 | MS.gene28167:intron | 40.0% | |
| ATTCCCGTGATTTACTCAAC+GGG | + | chr4.4:9573231-9573250 | MS.gene28167:intron | 40.0% | |
| CAAAAGGCTGAAAATGTGAG+CGG | + | chr4.4:9572276-9572295 | MS.gene28167:CDS | 40.0% | |
| CACATTAACCTTTATGCCCT+AGG | + | chr4.4:9574347-9574366 | MS.gene28167:intron | 40.0% | |
| CAGAGAATCCAAATCCTGAA+TGG | + | chr4.4:9575516-9575535 | MS.gene28167:intron | 40.0% | |
| CTCTTGACATAGATTTGGAC+TGG | + | chr4.4:9574622-9574641 | MS.gene28167:intron | 40.0% | |
| CTTCTTCCTCAATAGAGTTG+AGG | - | chr4.4:9572491-9572510 | None:intergenic | 40.0% | |
| GAAACCAGCTAAGCTATGAA+AGG | - | chr4.4:9576589-9576608 | None:intergenic | 40.0% | |
| GACAAAAGGCTCATTATACG+CGG | - | chr4.4:9572079-9572098 | None:intergenic | 40.0% | |
| GACGTATATCAAGAGACAAG+TGG | + | chr4.4:9576747-9576766 | MS.gene28167:CDS | 40.0% | |
| GAGCATATGGAAAATGCTCT+GGG | + | chr4.4:9573817-9573836 | MS.gene28167:CDS | 40.0% | |
| GGAACAATCACATGCCATAT+TGG | + | chr4.4:9576129-9576148 | MS.gene28167:CDS | 40.0% | |
| GGCACATAGAGTTAGATTAG+TGG | - | chr4.4:9572911-9572930 | None:intergenic | 40.0% | |
| GGCCTCAATAAGATCCAATA+TGG | - | chr4.4:9576146-9576165 | None:intergenic | 40.0% | |
| GTAAACACCTGAATCTCCAA+AGG | - | chr4.4:9573993-9574012 | None:intergenic | 40.0% | |
| GTCCTCAAAATGATGAAGAG+AGG | - | chr4.4:9575368-9575387 | None:intergenic | 40.0% | |
| GTTCTTGCATGATAGATCGA+AGG | + | chr4.4:9573949-9573968 | MS.gene28167:CDS | 40.0% | |
| GTTGTTCCTCAATCTAGCAT+AGG | - | chr4.4:9574195-9574214 | None:intergenic | 40.0% | |
| GTTTCAGACATGGTCAATTG+CGG | + | chr4.4:9576823-9576842 | MS.gene28167:CDS | 40.0% | |
| TAACTTACAACCAGCTCACA+TGG | + | chr4.4:9576048-9576067 | MS.gene28167:CDS | 40.0% | |
| TAAGACATATACGAGGAAGG+TGG | - | chr4.4:9574795-9574814 | None:intergenic | 40.0% | |
| TAGATGCAGTACGTGTTCTT+AGG | - | chr4.4:9576259-9576278 | None:intergenic | 40.0% | |
| TAGGTGTGAATGATTGGGTT+TGG | + | chr4.4:9574924-9574943 | MS.gene28167:intron | 40.0% | |
| TCGTGTAGGTGTGAATGATT+GGG | + | chr4.4:9574919-9574938 | MS.gene28167:intron | 40.0% | |
| TCTTATTGAGGCCAAATGGT+CGG | + | chr4.4:9576153-9576172 | MS.gene28167:CDS | 40.0% | |
| TGCATGATAGATCGAAGGAT+GGG | + | chr4.4:9573954-9573973 | MS.gene28167:CDS | 40.0% | |
| TGGATCAGCTGATCTTATAC+GGG | + | chr4.4:9575826-9575845 | MS.gene28167:CDS | 40.0% | |
| TGGATCTTATTGAGGCCAAA+TGG | + | chr4.4:9576149-9576168 | MS.gene28167:CDS | 40.0% | |
| TTGCAACCATGGATGACTAT+AGG | - | chr4.4:9572244-9572263 | None:intergenic | 40.0% | |
| TTGCATGATAGATCGAAGGA+TGG | + | chr4.4:9573953-9573972 | MS.gene28167:CDS | 40.0% | |
| TTTCAGACATGGTCAATTGC+GGG | + | chr4.4:9576824-9576843 | MS.gene28167:CDS | 40.0% | |
| ! | ACAGCTTTTGCAGCAATATG+TGG | - | chr4.4:9576713-9576732 | None:intergenic | 40.0% |
| ! | AGTCTCAGTTGTTTCAGACA+TGG | + | chr4.4:9576813-9576832 | MS.gene28167:CDS | 40.0% |
| ! | GTCCTCTCTTCATCATTTTG+AGG | + | chr4.4:9575363-9575382 | MS.gene28167:intron | 40.0% |
| ! | TTGAAGCTTTGTCTTGCTGA+TGG | + | chr4.4:9573891-9573910 | MS.gene28167:CDS | 40.0% |
| !! | AACTGGGAAGTGTTGACAAA+AGG | - | chr4.4:9572093-9572112 | None:intergenic | 40.0% |
| !! | ACAATGGATTGTCATAGTCC+AGG | + | chr4.4:9573538-9573557 | MS.gene28167:CDS | 40.0% |
| !! | ATTTGTTATCCGGCTCTTGA+AGG | + | chr4.4:9576202-9576221 | MS.gene28167:CDS | 40.0% |
| !! | GACATAGATTTGGACTGGTA+TGG | + | chr4.4:9574627-9574646 | MS.gene28167:intron | 40.0% |
| !! | GCCACTCAAGATTTGTTATC+CGG | + | chr4.4:9576192-9576211 | MS.gene28167:CDS | 40.0% |
| !! | TTATACGGGCACTGAACAAT+CGG | + | chr4.4:9575840-9575859 | MS.gene28167:CDS | 40.0% |
| !!! | CGTTGGTTTTGCTCTTTGAT+AGG | - | chr4.4:9575140-9575159 | None:intergenic | 40.0% |
| !!! | CTGTTTTGAAGTAAAGGTCC+CGG | + | chr4.4:9574680-9574699 | MS.gene28167:intron | 40.0% |
| !!! | TGCCTGCTAGTTTTAAGGTT+CGG | + | chr4.4:9573572-9573591 | MS.gene28167:CDS | 40.0% |
| AAAAGGACTCTAGCCAACCA+AGG | + | chr4.4:9575082-9575101 | MS.gene28167:intron | 45.0% | |
| AAACCAACGCAAAAGGCAAC+AGG | + | chr4.4:9575151-9575170 | MS.gene28167:intron | 45.0% | |
| AACCAACGCAAAAGGCAACA+GGG | + | chr4.4:9575152-9575171 | MS.gene28167:intron | 45.0% | |
| AACCAAGGAGAAATCTGGTC+TGG | - | chr4.4:9575989-9576008 | None:intergenic | 45.0% | |
| AACCAGCTCACATGGATTTC+CGG | + | chr4.4:9576056-9576075 | MS.gene28167:CDS | 45.0% | |
| AATAGGAAAGCGACTCCAGA+TGG | - | chr4.4:9572639-9572658 | None:intergenic | 45.0% | |
| AATGTGAGCGGCATAACTTC+AGG | + | chr4.4:9572288-9572307 | MS.gene28167:CDS | 45.0% | |
| ACCAAGGAGAAATCTGGTCT+GGG | - | chr4.4:9575988-9576007 | None:intergenic | 45.0% | |
| ACTCTATTGAGGAAGAAGCG+TGG | + | chr4.4:9572493-9572512 | MS.gene28167:CDS | 45.0% | |
| AGCTTTCGTTGAGATGGTAG+TGG | - | chr4.4:9575397-9575416 | None:intergenic | 45.0% | |
| CAGAAACTGACACTGGTCAA+TGG | - | chr4.4:9572210-9572229 | None:intergenic | 45.0% | |
| CAGAACCTGAAAAACGGCTT+TGG | - | chr4.4:9572037-9572056 | None:intergenic | 45.0% | |
| CCACTAACCAAGGAGAAATC+TGG | - | chr4.4:9575994-9576013 | None:intergenic | 45.0% | |
| CCAGATTTCTCCTTGGTTAG+TGG | + | chr4.4:9575991-9576010 | MS.gene28167:CDS | 45.0% | |
| CCTCCATTATGGTAAGACCA+AGG | - | chr4.4:9576353-9576372 | None:intergenic | 45.0% | |
| CGAGCATATGGAAAATGCTC+TGG | + | chr4.4:9573816-9573835 | MS.gene28167:CDS | 45.0% | |
| CTATTCCTTCTCAACTGCCT+TGG | + | chr4.4:9574815-9574834 | MS.gene28167:intron | 45.0% | |
| CTGGTCAATGGAAATCGATG+AGG | - | chr4.4:9572198-9572217 | None:intergenic | 45.0% | |
| CTTAACCAAGGCAGTTGAGA+AGG | - | chr4.4:9574823-9574842 | None:intergenic | 45.0% | |
| GAAATCGATGAGGCCTTAAC+TGG | - | chr4.4:9572188-9572207 | None:intergenic | 45.0% | |
| GATTGTCATAGTCCAGGACA+AGG | + | chr4.4:9573544-9573563 | MS.gene28167:CDS | 45.0% | |
| GCATGCTTCAAAGCCAGTTA+AGG | + | chr4.4:9572172-9572191 | MS.gene28167:CDS | 45.0% | |
| GCCGGATAACAAATCTTGAG+TGG | - | chr4.4:9576196-9576215 | None:intergenic | 45.0% | |
| GCTTTCGTTGAGATGGTAGT+GGG | - | chr4.4:9575396-9575415 | None:intergenic | 45.0% | |
| GGCAGTCCCATTTGTAACAT+TGG | - | chr4.4:9572445-9572464 | None:intergenic | 45.0% | |
| GTCCGAACCTTAAAACTAGC+AGG | - | chr4.4:9573577-9573596 | None:intergenic | 45.0% | |
| GTGGTCTGTTGTCAGTAGTA+TGG | + | chr4.4:9576099-9576118 | MS.gene28167:CDS | 45.0% | |
| TAAATCTAACAGCAGTGGGC+TGG | - | chr4.4:9575217-9575236 | None:intergenic | 45.0% | |
| TAGAATAGTGTCCCAGGACA+AGG | + | chr4.4:9573319-9573338 | MS.gene28167:intron | 45.0% | |
| TCAGAGCTGGGAGAAAACAA+TGG | + | chr4.4:9573522-9573541 | MS.gene28167:intron | 45.0% | |
| TCTTCATACACTTCAGCTGC+AGG | + | chr4.4:9572692-9572711 | MS.gene28167:CDS | 45.0% | |
| TGATGACTCTGCAACAGAAG+AGG | + | chr4.4:9573612-9573631 | MS.gene28167:CDS | 45.0% | |
| TTCCCGTGATTTACTCAACG+GGG | + | chr4.4:9573232-9573251 | MS.gene28167:intron | 45.0% | |
| TTGCCGTTGGATAAGACTTG+TGG | + | chr4.4:9574457-9574476 | MS.gene28167:intron | 45.0% | |
| ! | AAATCTAACAGCAGTGGGCT+GGG | - | chr4.4:9575216-9575235 | None:intergenic | 45.0% |
| ! | ACGAGGAAGGTGGAAAGTTT+TGG | - | chr4.4:9574785-9574804 | None:intergenic | 45.0% |
| ! | AGCTGCAAAAGCGCAGAATT+TGG | - | chr4.4:9575450-9575469 | None:intergenic | 45.0% |
| ! | CGCTCACATTTTCAGCCTTT+TGG | - | chr4.4:9572278-9572297 | None:intergenic | 45.0% |
| ! | CTCTATTGAGGAAGAAGCGT+GGG | + | chr4.4:9572494-9572513 | MS.gene28167:CDS | 45.0% |
| ! | CTCTGCAACAGAAGAGGTTT+TGG | + | chr4.4:9573618-9573637 | MS.gene28167:CDS | 45.0% |
| ! | CTCTGGGGATTTATCTGTTC+AGG | + | chr4.4:9573833-9573852 | MS.gene28167:CDS | 45.0% |
| ! | GCTGCAAAAGCGCAGAATTT+GGG | - | chr4.4:9575449-9575468 | None:intergenic | 45.0% |
| ! | GGAGTCGCTTTCCTATTGAA+GGG | + | chr4.4:9572642-9572661 | MS.gene28167:CDS | 45.0% |
| ! | TGGAGTCGCTTTCCTATTGA+AGG | + | chr4.4:9572641-9572660 | MS.gene28167:CDS | 45.0% |
| ! | TTTGGATCCTGACTTTGGAG+AGG | + | chr4.4:9573636-9573655 | MS.gene28167:CDS | 45.0% |
| !! | AAAGCGCAGAATTTGGGTTG+CGG | - | chr4.4:9575443-9575462 | None:intergenic | 45.0% |
| !! | AGGCCTTGGTCTTACCATAA+TGG | + | chr4.4:9576347-9576366 | MS.gene28167:intron | 45.0% |
| !! | CCTTGGTCTTACCATAATGG+AGG | + | chr4.4:9576350-9576369 | MS.gene28167:CDS | 45.0% |
| !! | GAGAGAGTTGATGTGCAAAC+AGG | + | chr4.4:9573855-9573874 | MS.gene28167:CDS | 45.0% |
| !!! | AGCTTTTTCAGCCTCCTCAT+AGG | - | chr4.4:9573260-9573279 | None:intergenic | 45.0% |
| !!! | GAGGTTTTGGATCCTGACTT+TGG | + | chr4.4:9573631-9573650 | MS.gene28167:CDS | 45.0% |
| !!! | GCTTTTTCAGCCTCCTCATA+GGG | - | chr4.4:9573259-9573278 | None:intergenic | 45.0% |
| !!! | TCTTGTTTTGTGGTGTGCCT+TGG | - | chr4.4:9575102-9575121 | None:intergenic | 45.0% |
| !!! | TGCTTCCAAAGCCGTTTTTC+AGG | + | chr4.4:9572029-9572048 | MS.gene28167:CDS | 45.0% |
| AACATGTGATCTCAGGGCTG+TGG | + | chr4.4:9573778-9573797 | MS.gene28167:intron | 50.0% | |
| AACCGGAAATCCATGTGAGC+TGG | - | chr4.4:9576061-9576080 | None:intergenic | 50.0% | |
| AAGAAGGCGATGTAGGTAGG+TGG | - | chr4.4:9575329-9575348 | None:intergenic | 50.0% | |
| ACCCAGACCAGATTTCTCCT+TGG | + | chr4.4:9575984-9576003 | MS.gene28167:CDS | 50.0% | |
| ACCTACCTACATCGCCTTCT+TGG | + | chr4.4:9575328-9575347 | MS.gene28167:intron | 50.0% | |
| ACGTGAGATGCTTACTCCTG+AGG | + | chr4.4:9575802-9575821 | MS.gene28167:CDS | 50.0% | |
| AGATCAGCTGATCCATCCTC+AGG | - | chr4.4:9575821-9575840 | None:intergenic | 50.0% | |
| AGCGGCATAACTTCAGGAGA+CGG | + | chr4.4:9572294-9572313 | MS.gene28167:CDS | 50.0% | |
| ATCGAAGGATGGGCATACAC+GGG | + | chr4.4:9573964-9573983 | MS.gene28167:CDS | 50.0% | |
| CAAACCTGCCAGAGAAGTGA+TGG | - | chr4.4:9576383-9576402 | None:intergenic | 50.0% | |
| CAAATCTGGCCCCATCAGTA+TGG | + | chr4.4:9574520-9574539 | MS.gene28167:intron | 50.0% | |
| CACTCGAGCTTTCGTTGAGA+TGG | - | chr4.4:9575403-9575422 | None:intergenic | 50.0% | |
| CACTGAGCACAAGATGCACT+CGG | + | chr4.4:9575024-9575043 | MS.gene28167:intron | 50.0% | |
| CAGGAGTGGCAGATAATCAC+TGG | + | chr4.4:9576226-9576245 | MS.gene28167:CDS | 50.0% | |
| CATACTGATGGGGCCAGATT+TGG | - | chr4.4:9574522-9574541 | None:intergenic | 50.0% | |
| CATCTCACGTGCACAACGTA+AGG | - | chr4.4:9575792-9575811 | None:intergenic | 50.0% | |
| CATTGCCAAGAAGGCGATGT+AGG | - | chr4.4:9575336-9575355 | None:intergenic | 50.0% | |
| CGATGTAGGTAGGTGGAGTT+GGG | - | chr4.4:9575322-9575341 | None:intergenic | 50.0% | |
| CGGAATCAACAGGAGCAACA+CGG | - | chr4.4:9573672-9573691 | None:intergenic | 50.0% | |
| CTACATCGCCTTCTTGGCAA+TGG | + | chr4.4:9575334-9575353 | MS.gene28167:intron | 50.0% | |
| CTGAGATGCACGTGACTGTA+GGG | - | chr4.4:9574970-9574989 | None:intergenic | 50.0% | |
| GACCCCGTTGAGTAAATCAC+GGG | - | chr4.4:9573237-9573256 | None:intergenic | 50.0% | |
| GAGATGCTTACTCCTGAGGA+TGG | + | chr4.4:9575806-9575825 | MS.gene28167:CDS | 50.0% | |
| GATCGAAGGATGGGCATACA+CGG | + | chr4.4:9573963-9573982 | MS.gene28167:CDS | 50.0% | |
| GATGTAGGTAGGTGGAGTTG+GGG | - | chr4.4:9575321-9575340 | None:intergenic | 50.0% | |
| GGACCCCGTTGAGTAAATCA+CGG | - | chr4.4:9573238-9573257 | None:intergenic | 50.0% | |
| GGCATGTGATTGTTCCTCTG+TGG | - | chr4.4:9576125-9576144 | None:intergenic | 50.0% | |
| GGGACTGCCACGAAAAATCT+TGG | + | chr4.4:9572456-9572475 | MS.gene28167:CDS | 50.0% | |
| TAAAGGTCCCGGATGTCTCA+AGG | + | chr4.4:9574691-9574710 | MS.gene28167:intron | 50.0% | |
| TAAGGTTCGGACAGTTCCTC+TGG | + | chr4.4:9573585-9573604 | MS.gene28167:CDS | 50.0% | |
| TGAGGCCAAATGGTCGGATT+TGG | + | chr4.4:9576159-9576178 | MS.gene28167:CDS | 50.0% | |
| TGCCACCAAATCCGACCATT+TGG | - | chr4.4:9576167-9576186 | None:intergenic | 50.0% | |
| TGTCAGTAGTATGGCCACAG+AGG | + | chr4.4:9576108-9576127 | MS.gene28167:CDS | 50.0% | |
| TTATCCGGCTCTTGAAGGTC+AGG | + | chr4.4:9576207-9576226 | MS.gene28167:CDS | 50.0% | |
| TTTGGGGACCTTGAGACATC+CGG | - | chr4.4:9574702-9574721 | None:intergenic | 50.0% | |
| ! | AAGAAGCGTGGGATCTACTG+AGG | + | chr4.4:9572505-9572524 | MS.gene28167:CDS | 50.0% |
| ! | AGAAGCGTGGGATCTACTGA+GGG | + | chr4.4:9572506-9572525 | MS.gene28167:CDS | 50.0% |
| ! | CAAGCAGCAGCTTTGACACA+AGG | - | chr4.4:9576853-9576872 | None:intergenic | 50.0% |
| ! | CTTACCATAATGGAGGCTCC+TGG | + | chr4.4:9576357-9576376 | MS.gene28167:CDS | 50.0% |
| ! | GGCTCATTATACGCGGATTG+AGG | - | chr4.4:9572072-9572091 | None:intergenic | 50.0% |
| ! | GTTTTGTGGTGTGCCTTGGT+TGG | - | chr4.4:9575098-9575117 | None:intergenic | 50.0% |
| ! | TAAAGATGAGGTGGGAGTGC+TGG | + | chr4.4:9574383-9574402 | MS.gene28167:intron | 50.0% |
| ! | TCTGAGATGCACGTGACTGT+AGG | - | chr4.4:9574971-9574990 | None:intergenic | 50.0% |
| ! | TTCCCTGTTGCCTTTTGCGT+TGG | - | chr4.4:9575157-9575176 | None:intergenic | 50.0% |
| !! | CAGGAGACGGTAATGGATCA+AGG | + | chr4.4:9572307-9572326 | MS.gene28167:CDS | 50.0% |
| !! | CGTGTTGCTCCTGTTGATTC+CGG | + | chr4.4:9573670-9573689 | MS.gene28167:CDS | 50.0% |
| !! | GGTTGGCTAGAGTCCTTTTG+AGG | - | chr4.4:9575081-9575100 | None:intergenic | 50.0% |
| !! | TTCGTTGAGATGGTAGTGGG+TGG | - | chr4.4:9575393-9575412 | None:intergenic | 50.0% |
| AACAGGAGCAACACGGCCAA+TGG | - | chr4.4:9573665-9573684 | None:intergenic | 55.0% | |
| ATGGCCAGGAGCCTCCATTA+TGG | - | chr4.4:9576364-9576383 | None:intergenic | 55.0% | |
| ATGGCTGCCTCTCCAAAGTC+AGG | - | chr4.4:9573646-9573665 | None:intergenic | 55.0% | |
| ATGTGATCTCAGGGCTGTGG+TGG | + | chr4.4:9573781-9573800 | MS.gene28167:intron | 55.0% | |
| CACTCCTGACCTTCAAGAGC+CGG | - | chr4.4:9576214-9576233 | None:intergenic | 55.0% | |
| GCAGAGTCATCACCTTCCAG+AGG | - | chr4.4:9573604-9573623 | None:intergenic | 55.0% | |
| GCAGGCATCAAACCTTGTCC+TGG | - | chr4.4:9573559-9573578 | None:intergenic | 55.0% | |
| GCCAACCCAAAAGGAAAGCG+CGG | + | chr4.4:9576941-9576960 | MS.gene28167:CDS | 55.0% | |
| GCCAAGAAGGCGATGTAGGT+AGG | - | chr4.4:9575332-9575351 | None:intergenic | 55.0% | |
| GCGATGTAGGTAGGTGGAGT+TGG | - | chr4.4:9575323-9575342 | None:intergenic | 55.0% | |
| GGCCAAATGGTCGGATTTGG+TGG | + | chr4.4:9576162-9576181 | MS.gene28167:CDS | 55.0% | |
| GTTCGGACAGTTCCTCTGGA+AGG | + | chr4.4:9573589-9573608 | MS.gene28167:CDS | 55.0% | |
| TACTCAACGGGGTCCCTATG+AGG | + | chr4.4:9573243-9573262 | MS.gene28167:intron | 55.0% | |
| TTGGGGACCTTGAGACATCC+GGG | - | chr4.4:9574701-9574720 | None:intergenic | 55.0% | |
| ! | CCAACCCAAAAGGAAAGCGC+GGG | + | chr4.4:9576942-9576961 | MS.gene28167:CDS | 55.0% |
| ! | CGCGGATTGAGGAACAACAC+TGG | - | chr4.4:9572061-9572080 | None:intergenic | 55.0% |
| ! | CGGGCATCCTTTGGAGATTC+AGG | + | chr4.4:9573983-9574002 | MS.gene28167:CDS | 55.0% |
| ! | GACTTTGGAGAGGCAGCCAT+TGG | + | chr4.4:9573646-9573665 | MS.gene28167:CDS | 55.0% |
| ! | TCCTCCCGCGCTTTCCTTTT+GGG | - | chr4.4:9576949-9576968 | None:intergenic | 55.0% |
| ! | TTCCTCCCGCGCTTTCCTTT+TGG | - | chr4.4:9576950-9576969 | None:intergenic | 55.0% |
| !! | AATTTGGGTTGCGGCTGCAG+AGG | - | chr4.4:9575434-9575453 | None:intergenic | 55.0% |
| !! | GTTGAGATGGTAGTGGGTGG+AGG | - | chr4.4:9575390-9575409 | None:intergenic | 55.0% |
| CGGCTCTTGAAGGTCAGGAG+TGG | + | chr4.4:9576212-9576231 | MS.gene28167:CDS | 60.0% | |
| CTGCCAGAGAAGTGATGGCC+AGG | - | chr4.4:9576378-9576397 | None:intergenic | 60.0% | |
| CTGGCCATCACTTCTCTGGC+AGG | + | chr4.4:9576376-9576395 | MS.gene28167:CDS | 60.0% | |
| GAGGGGACGTGGCTGTTTGA+TGG | - | chr4.4:9575248-9575267 | None:intergenic | 60.0% | |
| GCTCCTGGCCATCACTTCTC+TGG | + | chr4.4:9576372-9576391 | MS.gene28167:CDS | 60.0% | |
| GGGCATACACGGGCATCCTT+TGG | + | chr4.4:9573974-9573993 | MS.gene28167:CDS | 60.0% | |
| TCAACGGGGTCCCTATGAGG+AGG | + | chr4.4:9573246-9573265 | MS.gene28167:intron | 60.0% | |
| ! | ACCCAAAAGGAAAGCGCGGG+AGG | + | chr4.4:9576945-9576964 | MS.gene28167:CDS | 60.0% |
| !! | ACGGGCACTGAACAATCGGC+TGG | + | chr4.4:9575844-9575863 | MS.gene28167:CDS | 60.0% |
| !! | CCCGCGCTTTCCTTTTGGGT+TGG | - | chr4.4:9576945-9576964 | None:intergenic | 60.0% |
| ! | TTGGGTTGCGGCTGCAGAGG+CGG | - | chr4.4:9575431-9575450 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9572018 | 9576997 | 9572018 | ID=MS.gene28167 |
| chr4.4 | mRNA | 9572018 | 9576997 | 9572018 | ID=MS.gene28167.t1;Parent=MS.gene28167 |
| chr4.4 | exon | 9572018 | 9572713 | 9572018 | ID=MS.gene28167.t1.exon1;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9572018 | 9572713 | 9572018 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| chr4.4 | exon | 9573526 | 9573691 | 9573526 | ID=MS.gene28167.t1.exon2;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9573526 | 9573691 | 9573526 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| chr4.4 | exon | 9573793 | 9574004 | 9573793 | ID=MS.gene28167.t1.exon3;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9573793 | 9574004 | 9573793 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| chr4.4 | exon | 9575773 | 9576266 | 9575773 | ID=MS.gene28167.t1.exon4;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9575773 | 9576266 | 9575773 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| chr4.4 | exon | 9576349 | 9576397 | 9576349 | ID=MS.gene28167.t1.exon5;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9576349 | 9576397 | 9576349 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| chr4.4 | exon | 9576680 | 9576997 | 9576680 | ID=MS.gene28167.t1.exon6;Parent=MS.gene28167.t1 |
| chr4.4 | CDS | 9576680 | 9576997 | 9576680 | ID=cds.MS.gene28167.t1;Parent=MS.gene28167.t1 |
| Gene Sequence |
| Protein sequence |
