Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29775.t1 | XP_013459243.1 | 96.3 | 406 | 15 | 0 | 1 | 406 | 52 | 457 | 1.10E-227 | 798.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29775.t1 | Q93Y09 | 64.5 | 406 | 141 | 1 | 1 | 403 | 53 | 458 | 3.9e-157 | 555.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29775.t1 | A0A072UTV7 | 96.3 | 406 | 15 | 0 | 1 | 406 | 52 | 457 | 7.9e-228 | 798.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene29775 | 0.807275 | 5.47E-50 | -1.69E-46 |
| MS.gene049170 | MS.gene29775 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene049993 | MS.gene29775 | 0.836451 | 9.29E-57 | -1.69E-46 |
| MS.gene050133 | MS.gene29775 | -0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene29775 | 0.842821 | 2.05E-58 | -1.69E-46 |
| MS.gene050400 | MS.gene29775 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene29775 | 0.811157 | 8.06E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene29775 | -0.908543 | 1.52E-81 | -1.69E-46 |
| MS.gene050464 | MS.gene29775 | 0.835424 | 1.69E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene29775 | 0.849591 | 2.93E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene29775 | 0.850443 | 1.69E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene29775 | 0.838063 | 3.59E-57 | -1.69E-46 |
| MS.gene051171 | MS.gene29775 | 0.827673 | 1.37E-54 | -1.69E-46 |
| MS.gene051208 | MS.gene29775 | 0.81697 | 4.20E-52 | -1.69E-46 |
| MS.gene051240 | MS.gene29775 | 0.814475 | 1.51E-51 | -1.69E-46 |
| MS.gene051242 | MS.gene29775 | 0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene29775 | 0.869328 | 3.36E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene29775 | 0.862139 | 6.26E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene29775 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene29775 | 0.8609 | 1.50E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene29775 | -0.907702 | 3.81E-81 | -1.69E-46 |
| MS.gene052077 | MS.gene29775 | 0.860579 | 1.87E-63 | -1.69E-46 |
| MS.gene052128 | MS.gene29775 | -0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene29775 | 0.863914 | 1.77E-64 | -1.69E-46 |
| MS.gene052135 | MS.gene29775 | 0.862809 | 3.90E-64 | -1.69E-46 |
| MS.gene052136 | MS.gene29775 | 0.8107 | 1.01E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene29775 | 0.805948 | 1.04E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene29775 | 0.85412 | 1.52E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene29775 | 0.845645 | 3.57E-59 | -1.69E-46 |
| MS.gene052389 | MS.gene29775 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene052469 | MS.gene29775 | 0.835718 | 1.43E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene29775 | 0.80644 | 8.22E-50 | -1.69E-46 |
| MS.gene052589 | MS.gene29775 | 0.828006 | 1.14E-54 | -1.69E-46 |
| MS.gene052590 | MS.gene29775 | 0.833222 | 6.04E-56 | -1.69E-46 |
| MS.gene053330 | MS.gene29775 | 0.901728 | 2.00E-78 | -1.69E-46 |
| MS.gene053557 | MS.gene29775 | 0.801534 | 8.61E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene29775 | 0.832573 | 8.75E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene29775 | 0.816629 | 5.01E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene29775 | 0.824447 | 8.03E-54 | -1.69E-46 |
| MS.gene054102 | MS.gene29775 | 0.819397 | 1.19E-52 | -1.69E-46 |
| MS.gene054110 | MS.gene29775 | 0.815613 | 8.45E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene29775 | 0.858297 | 9.07E-63 | -1.69E-46 |
| MS.gene054349 | MS.gene29775 | 0.827087 | 1.90E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene29775 | 0.821962 | 3.05E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene29775 | 0.879335 | 1.36E-69 | -1.69E-46 |
| MS.gene054809 | MS.gene29775 | -0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene29775 | 0.818956 | 1.50E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene29775 | 0.822277 | 2.58E-53 | -1.69E-46 |
| MS.gene055217 | MS.gene29775 | 0.831306 | 1.80E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene29775 | 0.823005 | 1.75E-53 | -1.69E-46 |
| MS.gene055370 | MS.gene29775 | 0.834183 | 3.47E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene29775 | 0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene29775 | 0.821317 | 4.31E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene29775 | 0.905714 | 3.20E-80 | -1.69E-46 |
| MS.gene05556 | MS.gene29775 | 0.8382 | 3.31E-57 | -1.69E-46 |
| MS.gene055601 | MS.gene29775 | -0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene29775 | 0.805326 | 1.41E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene29775 | 0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene29775 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene056087 | MS.gene29775 | 0.801201 | 1.01E-48 | -1.69E-46 |
| MS.gene056305 | MS.gene29775 | 0.814804 | 1.28E-51 | -1.69E-46 |
| MS.gene056337 | MS.gene29775 | 0.801779 | 7.67E-49 | -1.69E-46 |
| MS.gene056351 | MS.gene29775 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene29775 | 0.819002 | 1.46E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene29775 | 0.801292 | 9.64E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene29775 | 0.802383 | 5.76E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene29775 | 0.866251 | 3.27E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene29775 | 0.828454 | 8.91E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene29775 | 0.849776 | 2.60E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene29775 | 0.811044 | 8.52E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene29775 | -0.848953 | 4.41E-60 | -1.69E-46 |
| MS.gene056979 | MS.gene29775 | 0.847486 | 1.12E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene29775 | 0.83729 | 5.67E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene29775 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene29775 | 0.80927 | 2.06E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene29775 | 0.834924 | 2.26E-56 | -1.69E-46 |
| MS.gene057476 | MS.gene29775 | 0.806921 | 6.50E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene29775 | 0.821469 | 3.97E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene29775 | 0.812403 | 4.31E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene29775 | 0.807512 | 4.88E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene29775 | 0.830346 | 3.09E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene29775 | 0.824979 | 6.02E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene29775 | 0.870231 | 1.71E-66 | -1.69E-46 |
| MS.gene058233 | MS.gene29775 | 0.83939 | 1.63E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene29775 | 0.853142 | 2.90E-61 | -1.69E-46 |
| MS.gene058444 | MS.gene29775 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene29775 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene29775 | 0.84285 | 2.01E-58 | -1.69E-46 |
| MS.gene058746 | MS.gene29775 | 0.862402 | 5.20E-64 | -1.69E-46 |
| MS.gene05886 | MS.gene29775 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene29775 | 0.844132 | 9.13E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene29775 | 0.833116 | 6.42E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene29775 | 0.818302 | 2.10E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene29775 | 0.851773 | 7.13E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene29775 | 0.809179 | 2.15E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene29775 | 0.871358 | 7.26E-67 | -1.69E-46 |
| MS.gene059512 | MS.gene29775 | 0.840586 | 7.95E-58 | -1.69E-46 |
| MS.gene059683 | MS.gene29775 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene29775 | 0.837826 | 4.13E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene29775 | 0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene29775 | 0.818814 | 1.61E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene29775 | 0.824045 | 9.98E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene29775 | 0.840755 | 7.18E-58 | -1.69E-46 |
| MS.gene061114 | MS.gene29775 | -0.848143 | 7.39E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene29775 | 0.860061 | 2.68E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene29775 | 0.847462 | 1.14E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTAGTGCTTTGGTTAAA+TGG | 0.193819 | 3.3:+35412535 | MS.gene29775:CDS |
| CTTGAGATTGAAGTTGCTTT+TGG | 0.218956 | 3.3:-35414228 | None:intergenic |
| GATTCCAACCATATCTATTC+TGG | 0.242541 | 3.3:+35416567 | MS.gene29775:CDS |
| GGTACACGGTCTTTAGTAAA+TGG | 0.249224 | 3.3:+35416751 | MS.gene29775:CDS |
| TCCTATAGAACTTGGTTTAA+TGG | 0.256672 | 3.3:+35416808 | MS.gene29775:CDS |
| GTGTAAGAGTTCTTGTATTC+AGG | 0.263545 | 3.3:+35416608 | MS.gene29775:CDS |
| GATCTCCCTGGTTGTGAAAA+TGG | 0.279595 | 3.3:-35417507 | None:intergenic |
| TGTGTTCAAACCGAAATCTT+TGG | 0.329816 | 3.3:-35416779 | None:intergenic |
| CTCATGAGCTGCTCCTCTTA+TGG | 0.337801 | 3.3:-35417481 | None:intergenic |
| CCGTTTGCGCAAGAGTAAAT+AGG | 0.338463 | 3.3:+35414778 | MS.gene29775:CDS |
| AAACATTCACATATTTGAAT+AGG | 0.352371 | 3.3:+35415201 | MS.gene29775:CDS |
| AATGGATTAGCCAAAGATTT+CGG | 0.353684 | 3.3:+35416769 | MS.gene29775:CDS |
| GGTTGTTCTTCTGTTGGAGC+TGG | 0.354742 | 3.3:+35413156 | MS.gene29775:CDS |
| GCAGATAGGGAATCCTCTTC+TGG | 0.355694 | 3.3:+35414617 | MS.gene29775:intron |
| TTCATATATCAAAGAATAGT+TGG | 0.370578 | 3.3:-35417570 | None:intergenic |
| GCTCTTCATGCTAAGCTTGT+AGG | 0.375959 | 3.3:+35415239 | MS.gene29775:CDS |
| TTATCCTTTGCAACCATAAG+AGG | 0.383989 | 3.3:+35417468 | MS.gene29775:CDS |
| CCATTTAACCAAAGCACTAC+TGG | 0.385709 | 3.3:-35412535 | None:intergenic |
| GCTGGATGGACACAAGTATA+TGG | 0.392487 | 3.3:+35417438 | MS.gene29775:CDS |
| AACAATGAGTTGTGCAAGTT+GGG | 0.394486 | 3.3:-35414201 | None:intergenic |
| CTTCCAAGCCAGTAGTGCTT+TGG | 0.414675 | 3.3:+35412527 | MS.gene29775:CDS |
| TCCATTAAACCAAGTTCTAT+AGG | 0.420844 | 3.3:-35416809 | None:intergenic |
| CCTATTTACTCTTGCGCAAA+CGG | 0.423561 | 3.3:-35414778 | None:intergenic |
| AACAATGAGTTCTTTATCAC+AGG | 0.423884 | 3.3:+35414078 | MS.gene29775:CDS |
| AGTAAATAGGCTAGTGTCAA+TGG | 0.433325 | 3.3:+35414791 | MS.gene29775:CDS |
| GGGCCTGGTTGTTCTTCTGT+TGG | 0.435564 | 3.3:+35413150 | MS.gene29775:intron |
| AGCATATGTGCTAACTCAAC+TGG | 0.443526 | 3.3:+35415054 | MS.gene29775:CDS |
| CTGGGAAAACTTGTTAAGTC+AGG | 0.444625 | 3.3:+35416586 | MS.gene29775:CDS |
| CAACAGAGTCCTATAGAACT+TGG | 0.450027 | 3.3:+35416800 | MS.gene29775:CDS |
| ACTCTAGAGCTGAGTATCTC+TGG | 0.456915 | 3.3:+35414658 | MS.gene29775:CDS |
| CTCTTCATGCTAAGCTTGTA+GGG | 0.458817 | 3.3:+35415240 | MS.gene29775:CDS |
| TTCACAACCAGGGAGATCAT+TGG | 0.460300 | 3.3:+35417512 | MS.gene29775:CDS |
| ACCTGTCAAATCATCGTTCA+CGG | 0.467446 | 3.3:-35413431 | None:intergenic |
| TAACCAAAGCACTACTGGCT+TGG | 0.472081 | 3.3:-35412530 | None:intergenic |
| ATCACAGGGGAGAGCTATGC+AGG | 0.475351 | 3.3:+35414093 | MS.gene29775:CDS |
| GAGATCATTGGTGCTGCTAA+AGG | 0.480114 | 3.3:+35417524 | MS.gene29775:CDS |
| GATTCAGTATTACCGTTGCT+TGG | 0.480726 | 3.3:+35416730 | MS.gene29775:CDS |
| AGCACTACTGGCTTGGAAGC+TGG | 0.484486 | 3.3:-35412523 | None:intergenic |
| GCTGAGTATCTCTGGTCTCA+TGG | 0.494343 | 3.3:+35414666 | MS.gene29775:CDS |
| AGAGAAGATAGATGTTTGTG+TGG | 0.498648 | 3.3:+35415172 | MS.gene29775:CDS |
| AACTTGGTTTAATGGAAGAC+AGG | 0.500267 | 3.3:+35416816 | MS.gene29775:CDS |
| TTGGAATCACCTGCTGGTGT+TGG | 0.505453 | 3.3:+35413373 | MS.gene29775:CDS |
| ATTCCAACCATATCTATTCT+GGG | 0.506746 | 3.3:+35416568 | MS.gene29775:CDS |
| GAATGATTCATTAGTAGAGT+AGG | 0.511936 | 3.3:-35413401 | None:intergenic |
| CAAAAGCAACTTCAATCTCA+AGG | 0.516615 | 3.3:+35414229 | MS.gene29775:CDS |
| AGTGGCAAACATGCTGTACT+TGG | 0.523894 | 3.3:+35413354 | MS.gene29775:intron |
| TTTCCCAGAATAGATATGGT+TGG | 0.524165 | 3.3:-35416571 | None:intergenic |
| AGCAGCACCAATGATCTCCC+TGG | 0.527781 | 3.3:-35417519 | None:intergenic |
| TAGGAGAAACCAACACCAGC+AGG | 0.535980 | 3.3:-35413382 | None:intergenic |
| TCCGTGAACGATGATTTGAC+AGG | 0.542755 | 3.3:+35413430 | MS.gene29775:CDS |
| TGCTCCTCTTATGGTTGCAA+AGG | 0.542852 | 3.3:-35417472 | None:intergenic |
| GAACAATGAGTTGTGCAAGT+TGG | 0.548381 | 3.3:-35414202 | None:intergenic |
| CTGTACTTGGAATCACCTGC+TGG | 0.558525 | 3.3:+35413367 | MS.gene29775:CDS |
| AATGATTACAGTTGGAACAA+AGG | 0.561761 | 3.3:+35413231 | MS.gene29775:CDS |
| ACAATGAGTTCTTTATCACA+GGG | 0.576910 | 3.3:+35414079 | MS.gene29775:CDS |
| ACCACATGGACCACTTGTAG+TGG | 0.577155 | 3.3:+35415266 | MS.gene29775:CDS |
| TATTACCGTTGCTTGGTACA+CGG | 0.578535 | 3.3:+35416737 | MS.gene29775:CDS |
| TAAAACTTACCCACTACAAG+TGG | 0.584898 | 3.3:-35415276 | None:intergenic |
| CATAAGAGGAGCAGCTCATG+AGG | 0.586244 | 3.3:+35417482 | MS.gene29775:CDS |
| TCATGCCTGGTTTAGCAAGA+GGG | 0.587235 | 3.3:+35415149 | MS.gene29775:intron |
| AAAAGCAACTTCAATCTCAA+GGG | 0.591189 | 3.3:+35414230 | MS.gene29775:CDS |
| TCTGTGTTGAATTCCAGAAG+AGG | 0.596221 | 3.3:-35414630 | None:intergenic |
| ATTAGAAGACAATATGCAAG+TGG | 0.621696 | 3.3:+35414744 | MS.gene29775:CDS |
| AGCTTGTAGGGATCACCACA+TGG | 0.629981 | 3.3:+35415252 | MS.gene29775:CDS |
| CCACATGGACCACTTGTAGT+GGG | 0.641254 | 3.3:+35415267 | MS.gene29775:CDS |
| GCTCCAACAGAAGAACAACC+AGG | 0.659750 | 3.3:-35413153 | None:intergenic |
| CCCACTACAAGTGGTCCATG+TGG | 0.665874 | 3.3:-35415267 | None:intergenic |
| GTAGTGCTTTGGTTAAATGG+AGG | 0.666465 | 3.3:+35412538 | MS.gene29775:CDS |
| AAAGACCGTGTACCAAGCAA+CGG | 0.670704 | 3.3:-35416742 | None:intergenic |
| ACAATGAGTTGTGCAAGTTG+GGG | 0.679051 | 3.3:-35414200 | None:intergenic |
| AAATAGGCTAGTGTCAATGG+AGG | 0.690398 | 3.3:+35414794 | MS.gene29775:CDS |
| CAATGAGTTCTTTATCACAG+GGG | 0.717844 | 3.3:+35414080 | MS.gene29775:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAGTTTAAATGAA+TGG | + | chr3.3:35417081-35417100 | MS.gene29775:intron | 10.0% |
| !! | AAAAACTGAATATTTAAATA+TGG | - | chr3.3:35417320-35417339 | None:intergenic | 10.0% |
| !! | AAATTTAACAATGTAAATAA+AGG | - | chr3.3:35416303-35416322 | None:intergenic | 10.0% |
| !! | GATAAAAAAAATTAAGTTAT+TGG | + | chr3.3:35417047-35417066 | MS.gene29775:intron | 10.0% |
| !! | TAACAAAAATTAATTATGAA+TGG | - | chr3.3:35413699-35413718 | None:intergenic | 10.0% |
| !! | TTTACATTGTTAAATTTATT+CGG | + | chr3.3:35416306-35416325 | MS.gene29775:intron | 10.0% |
| !!! | ATTTGCTTTTTTTTTTTTAA+CGG | - | chr3.3:35413071-35413090 | None:intergenic | 10.0% |
| !!! | TAAATCATACTAATTTTTTA+AGG | + | chr3.3:35415420-35415439 | MS.gene29775:intron | 10.0% |
| !!! | TGCAATTTTAATTTATTTAT+AGG | - | chr3.3:35414342-35414361 | None:intergenic | 10.0% |
| !!! | TTAAATATTCAGTTTTTTAT+TGG | + | chr3.3:35417323-35417342 | MS.gene29775:intron | 10.0% |
| !!! | TTCATAATTAATTTTTGTTA+CGG | + | chr3.3:35413699-35413718 | MS.gene29775:intron | 10.0% |
| !!! | TTGATTAATTTTTTTTTTCA+AGG | + | chr3.3:35416427-35416446 | MS.gene29775:intron | 10.0% |
| !!! | TTTAATTTTGTTAATTTCAT+TGG | + | chr3.3:35415496-35415515 | MS.gene29775:intron | 10.0% |
| !!! | TTTTTAAAAAAAAAGAAGTT+GGG | + | chr3.3:35414837-35414856 | MS.gene29775:intron | 10.0% |
| !!! | TTTTTTAAAAAAAAAGAAGT+TGG | + | chr3.3:35414836-35414855 | MS.gene29775:intron | 10.0% |
| !! | AAAAAAATTAATCAACAAAG+AGG | - | chr3.3:35416422-35416441 | None:intergenic | 15.0% |
| !! | AAAAAATTAATCAACAAAGA+GGG | - | chr3.3:35416421-35416440 | None:intergenic | 15.0% |
| !! | AATATGTGTAATTAATGTAT+TGG | - | chr3.3:35417235-35417254 | None:intergenic | 15.0% |
| !! | AATCAAATATCAAAATAAGT+TGG | - | chr3.3:35417409-35417428 | None:intergenic | 15.0% |
| !! | ACTTTATGAATAAATTATTG+AGG | + | chr3.3:35415921-35415940 | MS.gene29775:intron | 15.0% |
| !! | ATAAAGATGATATCTTAATA+TGG | - | chr3.3:35413971-35413990 | None:intergenic | 15.0% |
| !! | CTTTATGAATAAATTATTGA+GGG | + | chr3.3:35415922-35415941 | MS.gene29775:intron | 15.0% |
| !! | GTTAAAAAAAAAAAAGCAAA+TGG | + | chr3.3:35413070-35413089 | MS.gene29775:intron | 15.0% |
| !! | TTATTAAAAATGATTACAGT+TGG | + | chr3.3:35413223-35413242 | MS.gene29775:CDS | 15.0% |
| !! | TTCTGATTATTAGATAAATA+CGG | + | chr3.3:35416063-35416082 | MS.gene29775:intron | 15.0% |
| !!! | AATGAATAGTATTTTCATTT+TGG | + | chr3.3:35414134-35414153 | MS.gene29775:intron | 15.0% |
| !!! | ACTATTCTATTTAATTTTGA+AGG | - | chr3.3:35416272-35416291 | None:intergenic | 15.0% |
| !!! | ATTATTTTATGGAAATGAAT+GGG | + | chr3.3:35415330-35415349 | MS.gene29775:intron | 15.0% |
| !!! | ATTGATTACAAATGATTTTT+AGG | + | chr3.3:35413635-35413654 | MS.gene29775:intron | 15.0% |
| !!! | ATTTTGATATTTGATTTTTC+AGG | + | chr3.3:35417413-35417432 | MS.gene29775:intron | 15.0% |
| !!! | CTTATTTTTCATTTCATTTT+TGG | + | chr3.3:35413547-35413566 | MS.gene29775:intron | 15.0% |
| !!! | TATTAGTTCTATTTAATCTT+AGG | - | chr3.3:35413822-35413841 | None:intergenic | 15.0% |
| !!! | TATTTTGTTATGTTCTAATT+TGG | + | chr3.3:35413762-35413781 | MS.gene29775:intron | 15.0% |
| !!! | TTATAGAATAAGAAACATTT+TGG | + | chr3.3:35414555-35414574 | MS.gene29775:intron | 15.0% |
| !! | AAACATTCACATATTTGAAT+AGG | + | chr3.3:35415201-35415220 | MS.gene29775:CDS | 20.0% |
| !! | AAATAAACTTAGTGTATGTT+TGG | - | chr3.3:35413730-35413749 | None:intergenic | 20.0% |
| !! | AAATCTAGAAACAAAAAATG+CGG | + | chr3.3:35415791-35415810 | MS.gene29775:intron | 20.0% |
| !! | AATGCAAAATTGATTACAAA+GGG | + | chr3.3:35413572-35413591 | MS.gene29775:intron | 20.0% |
| !! | ATATCAACAAAGTAATAAGT+CGG | - | chr3.3:35414596-35414615 | None:intergenic | 20.0% |
| !! | ATTAATTACTAGAATATCAG+CGG | - | chr3.3:35415974-35415993 | None:intergenic | 20.0% |
| !! | ATTTCATCAGTAACATTATT+TGG | + | chr3.3:35416235-35416254 | MS.gene29775:intron | 20.0% |
| !! | CATAGAATGTTACTATTTAA+AGG | + | chr3.3:35417257-35417276 | MS.gene29775:intron | 20.0% |
| !! | CTAGTAATTAATCTTCATTA+GGG | + | chr3.3:35415982-35416001 | MS.gene29775:intron | 20.0% |
| !! | CTTGAAATCAAAGAATAATT+TGG | - | chr3.3:35415522-35415541 | None:intergenic | 20.0% |
| !! | TAACTAATATGTATCAATGT+CGG | + | chr3.3:35416870-35416889 | MS.gene29775:intron | 20.0% |
| !! | TAATTGAAATGAGTTAAGTT+TGG | + | chr3.3:35416461-35416480 | MS.gene29775:intron | 20.0% |
| !! | TATATTATAAGTGCTACATT+TGG | + | chr3.3:35412733-35412752 | MS.gene29775:intron | 20.0% |
| !! | TATGATTCTTAAAATCACTT+GGG | + | chr3.3:35415307-35415326 | MS.gene29775:intron | 20.0% |
| !! | TCAGAAAAAGAAAATTTGAA+AGG | - | chr3.3:35416049-35416068 | None:intergenic | 20.0% |
| !! | TCTAGTAATTAATCTTCATT+AGG | + | chr3.3:35415981-35416000 | MS.gene29775:intron | 20.0% |
| !! | TTATGATTCTTAAAATCACT+TGG | + | chr3.3:35415306-35415325 | MS.gene29775:intron | 20.0% |
| !! | TTTCATCAGTAACATTATTT+GGG | + | chr3.3:35416236-35416255 | MS.gene29775:intron | 20.0% |
| !!! | AACATACACTAAGTTTATTT+TGG | + | chr3.3:35413730-35413749 | MS.gene29775:intron | 20.0% |
| !!! | AAGATGTTTTGTATTTTGAA+GGG | + | chr3.3:35413130-35413149 | MS.gene29775:intron | 20.0% |
| !!! | ACATACACTAAGTTTATTTT+GGG | + | chr3.3:35413731-35413750 | MS.gene29775:intron | 20.0% |
| !!! | ATATAGATTAAAAGTGTATC+TGG | - | chr3.3:35412718-35412737 | None:intergenic | 20.0% |
| !!! | ATATTATATAGTTCGTTTTG+AGG | + | chr3.3:35414897-35414916 | MS.gene29775:intron | 20.0% |
| !!! | ATCTTGTTTTTTTACAACAT+TGG | + | chr3.3:35414031-35414050 | MS.gene29775:CDS | 20.0% |
| !!! | CAAATTATTCTTTGATTTCA+AGG | + | chr3.3:35415520-35415539 | MS.gene29775:intron | 20.0% |
| !!! | GATTATTTTATGGAAATGAA+TGG | + | chr3.3:35415329-35415348 | MS.gene29775:intron | 20.0% |
| !!! | GCAAATTTTATTGAAAAACT+CGG | - | chr3.3:35413049-35413068 | None:intergenic | 20.0% |
| !!! | TAAACCAAACTAGATTTTAA+AGG | + | chr3.3:35413886-35413905 | MS.gene29775:intron | 20.0% |
| !!! | TAAGATGTTTTGTATTTTGA+AGG | + | chr3.3:35413129-35413148 | MS.gene29775:intron | 20.0% |
| !!! | TAATTATGAATGGATTGATT+TGG | - | chr3.3:35413689-35413708 | None:intergenic | 20.0% |
| !!! | TATTATATAGTTCGTTTTGA+GGG | + | chr3.3:35414898-35414917 | MS.gene29775:intron | 20.0% |
| !!! | TCAAAATAAGTTGGTTTTAA+AGG | - | chr3.3:35417400-35417419 | None:intergenic | 20.0% |
| !!! | TGGTTAAACTTTTATGTTAT+AGG | + | chr3.3:35413090-35413109 | MS.gene29775:intron | 20.0% |
| !!! | TTAATAAGACCATTTTTAGT+TGG | - | chr3.3:35413210-35413229 | None:intergenic | 20.0% |
| !!! | TTTTCCTTTAAAATCTAGTT+TGG | - | chr3.3:35413893-35413912 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCTAGATTTCTAT+CGG | - | chr3.3:35415787-35415806 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGAGACAATA+TGG | + | chr3.3:35416363-35416382 | MS.gene29775:intron | 20.0% |
| ! | AAAATCCTTAAAGAATGTCT+CGG | - | chr3.3:35417170-35417189 | None:intergenic | 25.0% |
| ! | AAAGAGAATCTAGATTGAAA+AGG | - | chr3.3:35415098-35415117 | None:intergenic | 25.0% |
| ! | ACAAATAAAATACACAAGCA+GGG | - | chr3.3:35414372-35414391 | None:intergenic | 25.0% |
| ! | ATAAATTATTGAGGGAAACT+TGG | + | chr3.3:35415930-35415949 | MS.gene29775:intron | 25.0% |
| ! | ATGCAAAATTGATTACAAAG+GGG | + | chr3.3:35413573-35413592 | MS.gene29775:intron | 25.0% |
| ! | GAATAACAATCTAAGCTAAA+AGG | + | chr3.3:35415738-35415757 | MS.gene29775:intron | 25.0% |
| ! | GAATGCAAAATTGATTACAA+AGG | + | chr3.3:35413571-35413590 | MS.gene29775:intron | 25.0% |
| ! | TAAAAAAAAAGAAGTTGGGA+AGG | + | chr3.3:35414841-35414860 | MS.gene29775:intron | 25.0% |
| ! | TAAATTATTGAGGGAAACTT+GGG | + | chr3.3:35415931-35415950 | MS.gene29775:intron | 25.0% |
| ! | TATAATTCCTTCTGTAAGTT+CGG | + | chr3.3:35416138-35416157 | MS.gene29775:intron | 25.0% |
| !! | GTTTAGTTTAATAGCTTCAA+TGG | - | chr3.3:35414938-35414957 | None:intergenic | 25.0% |
| !! | TATTGAGTAAACAAGCATTT+TGG | + | chr3.3:35414287-35414306 | MS.gene29775:intron | 25.0% |
| !!! | AAAGGTATTAATGAGTGTTT+CGG | + | chr3.3:35417275-35417294 | MS.gene29775:intron | 25.0% |
| !!! | AAAGTTGCATATTTTTGTGA+AGG | - | chr3.3:35414718-35414737 | None:intergenic | 25.0% |
| !!! | AATCACTTGGGATTATTTTA+TGG | + | chr3.3:35415319-35415338 | MS.gene29775:intron | 25.0% |
| !!! | ATTATATAGTTCGTTTTGAG+GGG | + | chr3.3:35414899-35414918 | MS.gene29775:intron | 25.0% |
| !!! | CATACACTAAGTTTATTTTG+GGG | + | chr3.3:35413732-35413751 | MS.gene29775:intron | 25.0% |
| !!! | TAACCTATCTTTTGGTTTAT+CGG | - | chr3.3:35415571-35415590 | None:intergenic | 25.0% |
| !!! | TATTTTTGTGAAGGAATCAT+AGG | - | chr3.3:35414709-35414728 | None:intergenic | 25.0% |
| !!! | TTACAACTGGGTTTTAAATT+AGG | + | chr3.3:35412853-35412872 | MS.gene29775:intron | 25.0% |
| !!! | TTTGTTTCTAGATTTCTATC+GGG | - | chr3.3:35415786-35415805 | None:intergenic | 25.0% |
| AAAAGCAACTTCAATCTCAA+GGG | + | chr3.3:35414230-35414249 | MS.gene29775:CDS | 30.0% | |
| AAATCCTTAAAGAATGTCTC+GGG | - | chr3.3:35417169-35417188 | None:intergenic | 30.0% | |
| AACAATGAGTTCTTTATCAC+AGG | + | chr3.3:35414078-35414097 | MS.gene29775:CDS | 30.0% | |
| AATGATTACAGTTGGAACAA+AGG | + | chr3.3:35413231-35413250 | MS.gene29775:CDS | 30.0% | |
| ACAATGAGTTCTTTATCACA+GGG | + | chr3.3:35414079-35414098 | MS.gene29775:CDS | 30.0% | |
| ACTTTGTTGATATTGCAGAT+AGG | + | chr3.3:35414603-35414622 | MS.gene29775:intron | 30.0% | |
| AGTTTAATAGCTTCAATGGA+CGG | - | chr3.3:35414934-35414953 | None:intergenic | 30.0% | |
| ATACTATTCATTTAGCACGA+AGG | - | chr3.3:35414126-35414145 | None:intergenic | 30.0% | |
| ATCCAGAAATTACAAGACAA+AGG | - | chr3.3:35412997-35413016 | None:intergenic | 30.0% | |
| ATCTAAGCTAAAAGGTAAAC+AGG | + | chr3.3:35415746-35415765 | MS.gene29775:intron | 30.0% | |
| ATTAGAAGACAATATGCAAG+TGG | + | chr3.3:35414744-35414763 | MS.gene29775:CDS | 30.0% | |
| ATTATAAGTGCTACATTTGG+AGG | + | chr3.3:35412736-35412755 | MS.gene29775:intron | 30.0% | |
| ATTCCAACCATATCTATTCT+GGG | + | chr3.3:35416568-35416587 | MS.gene29775:CDS | 30.0% | |
| CAAAATAGCATGTGAATGAA+TGG | + | chr3.3:35413475-35413494 | MS.gene29775:intron | 30.0% | |
| CCATTCAAACCAACTAAAAA+TGG | + | chr3.3:35413198-35413217 | MS.gene29775:CDS | 30.0% | |
| CTTTGTTGATATTGCAGATA+GGG | + | chr3.3:35414604-35414623 | MS.gene29775:intron | 30.0% | |
| GAATCTAGATTGAAAAGGAA+TGG | - | chr3.3:35415093-35415112 | None:intergenic | 30.0% | |
| GAATGATTCATTAGTAGAGT+AGG | - | chr3.3:35413404-35413423 | None:intergenic | 30.0% | |
| GACAAATAAAATACACAAGC+AGG | - | chr3.3:35414373-35414392 | None:intergenic | 30.0% | |
| GATAAACCAAAAGATAGGTT+AGG | + | chr3.3:35415570-35415589 | MS.gene29775:intron | 30.0% | |
| GTATATGACAAAGTAACCAA+AGG | - | chr3.3:35416668-35416687 | None:intergenic | 30.0% | |
| GTTTAACATACCGAAGATAA+TGG | - | chr3.3:35416944-35416963 | None:intergenic | 30.0% | |
| GTTTCACTTACTATACTCAT+CGG | + | chr3.3:35416975-35416994 | MS.gene29775:intron | 30.0% | |
| TAGAGTAATTAAGCACGAAA+GGG | - | chr3.3:35413307-35413326 | None:intergenic | 30.0% | |
| TATCTACTAATCTGTCCATA+AGG | - | chr3.3:35414980-35414999 | None:intergenic | 30.0% | |
| TATGTATCAGTGTCCATATT+CGG | - | chr3.3:35412601-35412620 | None:intergenic | 30.0% | |
| TCCATTAAACCAAGTTCTAT+AGG | - | chr3.3:35416812-35416831 | None:intergenic | 30.0% | |
| TCCTATAGAACTTGGTTTAA+TGG | + | chr3.3:35416808-35416827 | MS.gene29775:CDS | 30.0% | |
| TTAGAGTAATTAAGCACGAA+AGG | - | chr3.3:35413308-35413327 | None:intergenic | 30.0% | |
| TTATAAGTGCTACATTTGGA+GGG | + | chr3.3:35412737-35412756 | MS.gene29775:intron | 30.0% | |
| ! | AAGTTTTCCCAGAATAGATA+TGG | - | chr3.3:35416578-35416597 | None:intergenic | 30.0% |
| ! | CAAGTTCTTTTCTAGATGAA+AGG | - | chr3.3:35417135-35417154 | None:intergenic | 30.0% |
| ! | GTCGTCAATTAGTAATTTTG+TGG | - | chr3.3:35414464-35414483 | None:intergenic | 30.0% |
| ! | TCTTGTAATTTCTGGATGAT+CGG | + | chr3.3:35413000-35413019 | MS.gene29775:intron | 30.0% |
| ! | TTGTTTGTTAATGGTGTTGA+AGG | + | chr3.3:35412897-35412916 | MS.gene29775:intron | 30.0% |
| ! | TTTATGCCTAACCTATCTTT+TGG | - | chr3.3:35415579-35415598 | None:intergenic | 30.0% |
| !! | AATGGATTAGCCAAAGATTT+CGG | + | chr3.3:35416769-35416788 | MS.gene29775:CDS | 30.0% |
| !! | TCAGTAGTTGTTTTACAACT+GGG | + | chr3.3:35412841-35412860 | MS.gene29775:intron | 30.0% |
| !! | TTCAGTAGTTGTTTTACAAC+TGG | + | chr3.3:35412840-35412859 | MS.gene29775:intron | 30.0% |
| !! | TTTTTAGGGGTTTTTTGGAT+GGG | + | chr3.3:35412784-35412803 | MS.gene29775:intron | 30.0% |
| !!! | CCATTTTTAGTTGGTTTGAA+TGG | - | chr3.3:35413201-35413220 | None:intergenic | 30.0% |
| !!! | TATTTGATTTTTCAGGTAGC+TGG | + | chr3.3:35417420-35417439 | MS.gene29775:intron | 30.0% |
| !!! | TGCTGTTTCTTTGTCTTTTT+GGG | - | chr3.3:35415712-35415731 | None:intergenic | 30.0% |
| !!! | TTGCTGTTTCTTTGTCTTTT+TGG | - | chr3.3:35415713-35415732 | None:intergenic | 30.0% |
| AAACTAAACTCTTACCTCTG+AGG | + | chr3.3:35414949-35414968 | MS.gene29775:intron | 35.0% | |
| AACAATGAGTTGTGCAAGTT+GGG | - | chr3.3:35414204-35414223 | None:intergenic | 35.0% | |
| AACTTGGTTTAATGGAAGAC+AGG | + | chr3.3:35416816-35416835 | MS.gene29775:CDS | 35.0% | |
| AATCTTCATTAGGGAGAGTA+GGG | + | chr3.3:35415991-35416010 | MS.gene29775:intron | 35.0% | |
| ACTCTGTCACATAAAGGAAA+TGG | - | chr3.3:35416520-35416539 | None:intergenic | 35.0% | |
| AGAGAAGATAGATGTTTGTG+TGG | + | chr3.3:35415172-35415191 | MS.gene29775:CDS | 35.0% | |
| AGTAAATAGGCTAGTGTCAA+TGG | + | chr3.3:35414791-35414810 | MS.gene29775:CDS | 35.0% | |
| AGTGTCTATGCCATTATCTT+CGG | + | chr3.3:35416931-35416950 | MS.gene29775:intron | 35.0% | |
| AGTTACCTGAGACAATTTCA+GGG | - | chr3.3:35415460-35415479 | None:intergenic | 35.0% | |
| ATATATTGAGCACGTGATAG+AGG | - | chr3.3:35415622-35415641 | None:intergenic | 35.0% | |
| ATTGTCTCAGGTAACTAACA+TGG | + | chr3.3:35415464-35415483 | MS.gene29775:intron | 35.0% | |
| CAAAAGCAACTTCAATCTCA+AGG | + | chr3.3:35414229-35414248 | MS.gene29775:CDS | 35.0% | |
| CAATGAGTTCTTTATCACAG+GGG | + | chr3.3:35414080-35414099 | MS.gene29775:CDS | 35.0% | |
| CTTCCGATAAACCAAAAGAT+AGG | + | chr3.3:35415565-35415584 | MS.gene29775:intron | 35.0% | |
| GAATGAATGGTATCACAAGA+TGG | + | chr3.3:35413488-35413507 | MS.gene29775:intron | 35.0% | |
| GATTAATTCATGCTTGTGTC+AGG | + | chr3.3:35414167-35414186 | MS.gene29775:intron | 35.0% | |
| GATTCCAACCATATCTATTC+TGG | + | chr3.3:35416567-35416586 | MS.gene29775:CDS | 35.0% | |
| GATTTCTATCGGGATACAAA+TGG | - | chr3.3:35415776-35415795 | None:intergenic | 35.0% | |
| GTGTAAGAGTTCTTGTATTC+AGG | + | chr3.3:35416608-35416627 | MS.gene29775:CDS | 35.0% | |
| TAAAACTTACCCACTACAAG+TGG | - | chr3.3:35415279-35415298 | None:intergenic | 35.0% | |
| TAATCTTCATTAGGGAGAGT+AGG | + | chr3.3:35415990-35416009 | MS.gene29775:intron | 35.0% | |
| TACTAGAATATCAGCGGTAT+AGG | - | chr3.3:35415968-35415987 | None:intergenic | 35.0% | |
| TAGTTACCTGAGACAATTTC+AGG | - | chr3.3:35415461-35415480 | None:intergenic | 35.0% | |
| TATTCGGAAGCAAGCAAATA+TGG | + | chr3.3:35416322-35416341 | MS.gene29775:intron | 35.0% | |
| TGACATTACAATCTCACCTT+TGG | + | chr3.3:35416649-35416668 | MS.gene29775:intron | 35.0% | |
| TGTATACATACACACACAAG+AGG | + | chr3.3:35415667-35415686 | MS.gene29775:intron | 35.0% | |
| TGTGTTCAAACCGAAATCTT+TGG | - | chr3.3:35416782-35416801 | None:intergenic | 35.0% | |
| TTATCCTTTGCAACCATAAG+AGG | + | chr3.3:35417468-35417487 | MS.gene29775:CDS | 35.0% | |
| TTGAGAACTCTGTCACATAA+AGG | - | chr3.3:35416526-35416545 | None:intergenic | 35.0% | |
| TTTAAATTAGGCGGTGATGT+TGG | + | chr3.3:35412865-35412884 | MS.gene29775:intron | 35.0% | |
| TTTCCCAGAATAGATATGGT+TGG | - | chr3.3:35416574-35416593 | None:intergenic | 35.0% | |
| ! | TAAGATGTTTTTCTCTGCAG+TGG | + | chr3.3:35416700-35416719 | MS.gene29775:intron | 35.0% |
| ! | TCATCAATCGATTCTGACTT+TGG | - | chr3.3:35416197-35416216 | None:intergenic | 35.0% |
| ! | TTGTTAATGGTGTTGAAGGT+AGG | + | chr3.3:35412901-35412920 | MS.gene29775:intron | 35.0% |
| !! | CTGTTTCTTTGTCTTTTTGG+GGG | - | chr3.3:35415710-35415729 | None:intergenic | 35.0% |
| !! | CTTGAGATTGAAGTTGCTTT+TGG | - | chr3.3:35414231-35414250 | None:intergenic | 35.0% |
| !! | GTCTATTTGGGGTTTTCTTT+TGG | + | chr3.3:35412950-35412969 | MS.gene29775:intron | 35.0% |
| !! | GTTTTTAGGGGTTTTTTGGA+TGG | + | chr3.3:35412783-35412802 | MS.gene29775:intron | 35.0% |
| !! | TGTTGGTGGTTGTTTGTTAA+TGG | + | chr3.3:35412888-35412907 | MS.gene29775:intron | 35.0% |
| !! | TGTTTCTTTGTCTTTTTGGG+GGG | - | chr3.3:35415709-35415728 | None:intergenic | 35.0% |
| !! | TTCCAACACTTGTTGATTCA+AGG | - | chr3.3:35416114-35416133 | None:intergenic | 35.0% |
| !!! | CAACTGGGTTTTAAATTAGG+CGG | + | chr3.3:35412856-35412875 | MS.gene29775:intron | 35.0% |
| !!! | GCTGTTTCTTTGTCTTTTTG+GGG | - | chr3.3:35415711-35415730 | None:intergenic | 35.0% |
| AAATAGGCTAGTGTCAATGG+AGG | + | chr3.3:35414794-35414813 | MS.gene29775:CDS | 40.0% | |
| AACAAAGAGGGAAGACATAG+AGG | - | chr3.3:35416409-35416428 | None:intergenic | 40.0% | |
| AACTGAACCAAGAAACTCCA+AGG | + | chr3.3:35415819-35415838 | MS.gene29775:intron | 40.0% | |
| ACAATGAGTTGTGCAAGTTG+GGG | - | chr3.3:35414203-35414222 | None:intergenic | 40.0% | |
| ACCTGTCAAATCATCGTTCA+CGG | - | chr3.3:35413434-35413453 | None:intergenic | 40.0% | |
| AGCATATGTGCTAACTCAAC+TGG | + | chr3.3:35415054-35415073 | MS.gene29775:CDS | 40.0% | |
| AGCTCTATGTTATGCAGCAA+GGG | + | chr3.3:35414005-35414024 | MS.gene29775:intron | 40.0% | |
| ATCAAAGACGTACACATTCG+AGG | - | chr3.3:35414404-35414423 | None:intergenic | 40.0% | |
| ATCTGGTGTCTGATACATGT+CGG | - | chr3.3:35412701-35412720 | None:intergenic | 40.0% | |
| CAACAAAATCGCGTAGTTGT+TGG | - | chr3.3:35413261-35413280 | None:intergenic | 40.0% | |
| CAACAGAGTCCTATAGAACT+TGG | + | chr3.3:35416800-35416819 | MS.gene29775:CDS | 40.0% | |
| CACCTTGAATCAACAAGTGT+TGG | + | chr3.3:35416109-35416128 | MS.gene29775:intron | 40.0% | |
| CCAGTAGTGCTTTGGTTAAA+TGG | + | chr3.3:35412535-35412554 | MS.gene29775:CDS | 40.0% | |
| CCATCGCGGAAAAAATAGAT+TGG | + | chr3.3:35415884-35415903 | MS.gene29775:intron | 40.0% | |
| CCTATTTACTCTTGCGCAAA+CGG | - | chr3.3:35414781-35414800 | None:intergenic | 40.0% | |
| CGCCTTTGTCTTGTAATTTC+TGG | + | chr3.3:35412992-35413011 | MS.gene29775:intron | 40.0% | |
| CTCTTCATGCTAAGCTTGTA+GGG | + | chr3.3:35415240-35415259 | MS.gene29775:CDS | 40.0% | |
| GAACAATGAGTTGTGCAAGT+TGG | - | chr3.3:35414205-35414224 | None:intergenic | 40.0% | |
| GATTCAGTATTACCGTTGCT+TGG | + | chr3.3:35416730-35416749 | MS.gene29775:CDS | 40.0% | |
| GCAGATACAAACACCGAATA+TGG | + | chr3.3:35412585-35412604 | MS.gene29775:intron | 40.0% | |
| GTAGTGCTTTGGTTAAATGG+AGG | + | chr3.3:35412538-35412557 | MS.gene29775:CDS | 40.0% | |
| GTTACCTGAGACAATTTCAG+GGG | - | chr3.3:35415459-35415478 | None:intergenic | 40.0% | |
| TAACCATTATCCGCATGTGT+TGG | + | chr3.3:35412661-35412680 | MS.gene29775:intron | 40.0% | |
| TAGACCCGAGACATTCTTTA+AGG | + | chr3.3:35417162-35417181 | MS.gene29775:intron | 40.0% | |
| TATTACCGTTGCTTGGTACA+CGG | + | chr3.3:35416737-35416756 | MS.gene29775:CDS | 40.0% | |
| TCTGTGTTGAATTCCAGAAG+AGG | - | chr3.3:35414633-35414652 | None:intergenic | 40.0% | |
| TGTTGATCCGAACTTACAGA+AGG | - | chr3.3:35416148-35416167 | None:intergenic | 40.0% | |
| TGTTTGCCACTACAACAAGT+AGG | - | chr3.3:35413345-35413364 | None:intergenic | 40.0% | |
| ! | CCATTTAACCAAAGCACTAC+TGG | - | chr3.3:35412538-35412557 | None:intergenic | 40.0% |
| ! | TAGCTCTATGTTATGCAGCA+AGG | + | chr3.3:35414004-35414023 | MS.gene29775:intron | 40.0% |
| ! | TGGAGGGATGGTTTTTCTTT+GGG | + | chr3.3:35412753-35412772 | MS.gene29775:intron | 40.0% |
| ! | TTGGAGGGATGGTTTTTCTT+TGG | + | chr3.3:35412752-35412771 | MS.gene29775:intron | 40.0% |
| !! | AAGACAAAGGCGTCGTATAT+AGG | - | chr3.3:35412984-35413003 | None:intergenic | 40.0% |
| !! | CTGGGAAAACTTGTTAAGTC+AGG | + | chr3.3:35416586-35416605 | MS.gene29775:CDS | 40.0% |
| !! | CTGTTTCCTACTTGTTGTAG+TGG | + | chr3.3:35413336-35413355 | MS.gene29775:intron | 40.0% |
| !! | GGTGGTTTTTAGGGGTTTTT+TGG | + | chr3.3:35412779-35412798 | MS.gene29775:intron | 40.0% |
| !! | GTTTTGTATTTTGAAGGGCC+TGG | + | chr3.3:35413135-35413154 | MS.gene29775:intron | 40.0% |
| !! | TTTGTCTTTTTGGGGGGTTT+TGG | - | chr3.3:35415703-35415722 | None:intergenic | 40.0% |
| !!! | CCAATCTATTTTTTCCGCGA+TGG | - | chr3.3:35415887-35415906 | None:intergenic | 40.0% |
| !!! | CTGCTAAAGGCATTTTTGGA+AGG | + | chr3.3:35417537-35417556 | MS.gene29775:CDS | 40.0% |
| !!! | TGATTTTTCAGGTAGCTGGA+TGG | + | chr3.3:35417424-35417443 | MS.gene29775:intron | 40.0% |
| !!! | TGGCGTTTTGGTGTCTATTT+GGG | + | chr3.3:35412938-35412957 | MS.gene29775:intron | 40.0% |
| AAAGACCGTGTACCAAGCAA+CGG | - | chr3.3:35416745-35416764 | None:intergenic | 45.0% | |
| AAGGATGCTACAACCATGTG+TGG | + | chr3.3:35415838-35415857 | MS.gene29775:intron | 45.0% | |
| AAGTGCTACATTTGGAGGGA+TGG | + | chr3.3:35412741-35412760 | MS.gene29775:intron | 45.0% | |
| AAGTTCGGATCAACATCTCC+AGG | + | chr3.3:35416153-35416172 | MS.gene29775:intron | 45.0% | |
| AATCACGACACCAACACATG+CGG | - | chr3.3:35412674-35412693 | None:intergenic | 45.0% | |
| ACACATGGTTGTAGCATCCT+TGG | - | chr3.3:35415839-35415858 | None:intergenic | 45.0% | |
| ACACCAACACATGCGGATAA+TGG | - | chr3.3:35412667-35412686 | None:intergenic | 45.0% | |
| ACTAATTGACGACACTCTCG+AGG | + | chr3.3:35414471-35414490 | MS.gene29775:intron | 45.0% | |
| AGCTTATCAAACCCGCTCTA+AGG | - | chr3.3:35416025-35416044 | None:intergenic | 45.0% | |
| AGTGGCAAACATGCTGTACT+TGG | + | chr3.3:35413354-35413373 | MS.gene29775:intron | 45.0% | |
| CACACACAAGAGGAAAGACT+AGG | + | chr3.3:35415677-35415696 | MS.gene29775:intron | 45.0% | |
| CATATGCTTACCTTCATGCC+TGG | + | chr3.3:35415136-35415155 | MS.gene29775:intron | 45.0% | |
| CCGTTTGCGCAAGAGTAAAT+AGG | + | chr3.3:35414778-35414797 | MS.gene29775:CDS | 45.0% | |
| GACACTGATACATAGACGCA+AGG | + | chr3.3:35412607-35412626 | MS.gene29775:intron | 45.0% | |
| GATCTCCCTGGTTGTGAAAA+TGG | - | chr3.3:35417510-35417529 | None:intergenic | 45.0% | |
| GCGGATAAATTAGCCACACA+TGG | - | chr3.3:35415854-35415873 | None:intergenic | 45.0% | |
| GCTCTTCATGCTAAGCTTGT+AGG | + | chr3.3:35415239-35415258 | MS.gene29775:CDS | 45.0% | |
| GCTGGATGGACACAAGTATA+TGG | + | chr3.3:35417438-35417457 | MS.gene29775:CDS | 45.0% | |
| GCTTATCAAACCCGCTCTAA+GGG | - | chr3.3:35416024-35416043 | None:intergenic | 45.0% | |
| GTAGCATCCTTGGAGTTTCT+TGG | - | chr3.3:35415829-35415848 | None:intergenic | 45.0% | |
| TCATGCCTGGTTTAGCAAGA+GGG | + | chr3.3:35415149-35415168 | MS.gene29775:intron | 45.0% | |
| TCCGTGAACGATGATTTGAC+AGG | + | chr3.3:35413430-35413449 | MS.gene29775:CDS | 45.0% | |
| TCTTGCTAAACCAGGCATGA+AGG | - | chr3.3:35415149-35415168 | None:intergenic | 45.0% | |
| TGCTCCTCTTATGGTTGCAA+AGG | - | chr3.3:35417475-35417494 | None:intergenic | 45.0% | |
| TTAGCCCCTGAAATTGTCTC+AGG | + | chr3.3:35415452-35415471 | MS.gene29775:intron | 45.0% | |
| TTCACAACCAGGGAGATCAT+TGG | + | chr3.3:35417512-35417531 | MS.gene29775:CDS | 45.0% | |
| TTCATGCCTGGTTTAGCAAG+AGG | + | chr3.3:35415148-35415167 | MS.gene29775:intron | 45.0% | |
| TTGAGCACGTGATAGAGGAT+AGG | - | chr3.3:35415617-35415636 | None:intergenic | 45.0% | |
| ! | AGGCTCCATTTTCACAACCA+GGG | + | chr3.3:35417502-35417521 | MS.gene29775:CDS | 45.0% |
| ! | AGGGATGGTTTTTCTTTGGG+TGG | + | chr3.3:35412756-35412775 | MS.gene29775:intron | 45.0% |
| ! | ATGGTGTTGAAGGTAGGTCT+TGG | + | chr3.3:35412907-35412926 | MS.gene29775:intron | 45.0% |
| ! | GGATGGTTTTTCTTTGGGTG+GGG | + | chr3.3:35412758-35412777 | MS.gene29775:intron | 45.0% |
| ! | GGGATGGTTTTTCTTTGGGT+GGG | + | chr3.3:35412757-35412776 | MS.gene29775:intron | 45.0% |
| ! | TAACCAAAGCACTACTGGCT+TGG | - | chr3.3:35412533-35412552 | None:intergenic | 45.0% |
| ! | TTGCAGACGCTTGATAATCC+TGG | - | chr3.3:35416174-35416193 | None:intergenic | 45.0% |
| ! | TTTGGGTGGGGTGGTTTTTA+GGG | + | chr3.3:35412770-35412789 | MS.gene29775:intron | 45.0% |
| !! | ACAAAGGCGTCGTATATAGG+TGG | - | chr3.3:35412981-35413000 | None:intergenic | 45.0% |
| !! | ACTCTAGAGCTGAGTATCTC+TGG | + | chr3.3:35414658-35414677 | MS.gene29775:CDS | 45.0% |
| !! | ATTCGGTGTTTGTATCTGCG+AGG | - | chr3.3:35412584-35412603 | None:intergenic | 45.0% |
| !! | GAGATCATTGGTGCTGCTAA+AGG | + | chr3.3:35417524-35417543 | MS.gene29775:CDS | 45.0% |
| !!! | GGCGTTTTGGTGTCTATTTG+GGG | + | chr3.3:35412939-35412958 | MS.gene29775:intron | 45.0% |
| !!! | GGTGCTGCTAAAGGCATTTT+TGG | + | chr3.3:35417533-35417552 | MS.gene29775:CDS | 45.0% |
| !!! | GTGGCGTTTTGGTGTCTATT+TGG | + | chr3.3:35412937-35412956 | MS.gene29775:intron | 45.0% |
| !!! | ATTTAAAATTTTCAATTTTA+AGG | - | chr3.3:35415405-35415424 | None:intergenic | 5.0% |
| !!! | ATTTTTATTTTTTTTGTTTT+AGG | + | chr3.3:35413842-35413861 | MS.gene29775:intron | 5.0% |
| ACCACATGGACCACTTGTAG+TGG | + | chr3.3:35415266-35415285 | MS.gene29775:CDS | 50.0% | |
| AGCTTGTAGGGATCACCACA+TGG | + | chr3.3:35415252-35415271 | MS.gene29775:CDS | 50.0% | |
| CATAAGAGGAGCAGCTCATG+AGG | + | chr3.3:35417482-35417501 | MS.gene29775:CDS | 50.0% | |
| CCACATGGACCACTTGTAGT+GGG | + | chr3.3:35415267-35415286 | MS.gene29775:CDS | 50.0% | |
| CTCATGAGCTGCTCCTCTTA+TGG | - | chr3.3:35417484-35417503 | None:intergenic | 50.0% | |
| CTGTACTTGGAATCACCTGC+TGG | + | chr3.3:35413367-35413386 | MS.gene29775:CDS | 50.0% | |
| CTTCATTAGGGAGAGTAGGG+AGG | + | chr3.3:35415994-35416013 | MS.gene29775:intron | 50.0% | |
| CTTCCAAGCCAGTAGTGCTT+TGG | + | chr3.3:35412527-35412546 | MS.gene29775:CDS | 50.0% | |
| GAAGGTAGGTCTTGGTTACG+TGG | + | chr3.3:35412915-35412934 | MS.gene29775:intron | 50.0% | |
| GCAGATAGGGAATCCTCTTC+TGG | + | chr3.3:35414617-35414636 | MS.gene29775:intron | 50.0% | |
| GCGCTTAAATGTGTGAAGCG+CGG | + | chr3.3:35414309-35414328 | MS.gene29775:intron | 50.0% | |
| GCTCCAACAGAAGAACAACC+AGG | - | chr3.3:35413156-35413175 | None:intergenic | 50.0% | |
| GCTGAGTATCTCTGGTCTCA+TGG | + | chr3.3:35414666-35414685 | MS.gene29775:CDS | 50.0% | |
| GGTTGTTCTTCTGTTGGAGC+TGG | + | chr3.3:35413156-35413175 | MS.gene29775:CDS | 50.0% | |
| GTCTCTGTTCGTCTTGTGCA+GGG | + | chr3.3:35413022-35413041 | MS.gene29775:intron | 50.0% | |
| TAGGAGAAACCAACACCAGC+AGG | - | chr3.3:35413385-35413404 | None:intergenic | 50.0% | |
| TCTCTCCCTCTTGCTAAACC+AGG | - | chr3.3:35415157-35415176 | None:intergenic | 50.0% | |
| TTAGGCGGTGATGTTGGTGT+TGG | + | chr3.3:35412871-35412890 | MS.gene29775:intron | 50.0% | |
| TTGGAATCACCTGCTGGTGT+TGG | + | chr3.3:35413373-35413392 | MS.gene29775:CDS | 50.0% | |
| ! | CTTTGGGTGGGGTGGTTTTT+AGG | + | chr3.3:35412769-35412788 | MS.gene29775:intron | 50.0% |
| ! | GAGGCTCCATTTTCACAACC+AGG | + | chr3.3:35417501-35417520 | MS.gene29775:CDS | 50.0% |
| ! | TCCATAAGGTGTCACCTCAG+AGG | - | chr3.3:35414966-35414985 | None:intergenic | 50.0% |
| ! | TGGTTTTTCTTTGGGTGGGG+TGG | + | chr3.3:35412761-35412780 | MS.gene29775:intron | 50.0% |
| ! | TGTTGGAGCTGGAGCTTTTG+TGG | + | chr3.3:35413167-35413186 | MS.gene29775:CDS | 50.0% |
| !! | ACCTCTGAGGTGACACCTTA+TGG | + | chr3.3:35414962-35414981 | MS.gene29775:intron | 50.0% |
| !! | TTGGGTGGGGTGGTTTTTAG+GGG | + | chr3.3:35412771-35412790 | MS.gene29775:intron | 50.0% |
| !! | TTGGTTACGTGGTGGCGTTT+TGG | + | chr3.3:35412926-35412945 | MS.gene29775:intron | 50.0% |
| AGCAGCACCAATGATCTCCC+TGG | - | chr3.3:35417522-35417541 | None:intergenic | 55.0% | |
| ATCACAGGGGAGAGCTATGC+AGG | + | chr3.3:35414093-35414112 | MS.gene29775:CDS | 55.0% | |
| CATTAGGGAGAGTAGGGAGG+AGG | + | chr3.3:35415997-35416016 | MS.gene29775:intron | 55.0% | |
| CCCACTACAAGTGGTCCATG+TGG | - | chr3.3:35415270-35415289 | None:intergenic | 55.0% | |
| CCGCACAACAATCTCCATCG+CGG | + | chr3.3:35415870-35415889 | MS.gene29775:intron | 55.0% | |
| CCGCGATGGAGATTGTTGTG+CGG | - | chr3.3:35415873-35415892 | None:intergenic | 55.0% | |
| GGGCCTGGTTGTTCTTCTGT+TGG | + | chr3.3:35413150-35413169 | MS.gene29775:intron | 55.0% | |
| GGTAGGTCTTGGTTACGTGG+TGG | + | chr3.3:35412918-35412937 | MS.gene29775:intron | 55.0% | |
| GGTCTCTGTTCGTCTTGTGC+AGG | + | chr3.3:35413021-35413040 | MS.gene29775:intron | 55.0% | |
| ! | GCTGGAGCTTTTGTGGAGCA+TGG | + | chr3.3:35413174-35413193 | MS.gene29775:CDS | 55.0% |
| !! | AGCACTACTGGCTTGGAAGC+TGG | - | chr3.3:35412526-35412545 | None:intergenic | 55.0% |
| AGGGAGGAGGACCCTTAGAG+CGG | + | chr3.3:35416010-35416029 | MS.gene29775:intron | 60.0% | |
| !! | GGCGGTGATGTTGGTGTTGG+TGG | + | chr3.3:35412874-35412893 | MS.gene29775:intron | 60.0% |
| GGGAGGAGGACCCTTAGAGC+GGG | + | chr3.3:35416011-35416030 | MS.gene29775:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 35412467 | 35417584 | 35412467 | ID=MS.gene29775 |
| chr3.3 | mRNA | 35412467 | 35417584 | 35412467 | ID=MS.gene29775.t1;Parent=MS.gene29775 |
| chr3.3 | exon | 35412467 | 35412559 | 35412467 | ID=MS.gene29775.t1.exon1;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35412467 | 35412559 | 35412467 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35413151 | 35413252 | 35413151 | ID=MS.gene29775.t1.exon2;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35413151 | 35413252 | 35413151 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35413356 | 35413451 | 35413356 | ID=MS.gene29775.t1.exon3;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35413356 | 35413451 | 35413356 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35414022 | 35414114 | 35414022 | ID=MS.gene29775.t1.exon4;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35414022 | 35414114 | 35414022 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35414189 | 35414259 | 35414189 | ID=MS.gene29775.t1.exon5;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35414189 | 35414259 | 35414189 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35414621 | 35414815 | 35414621 | ID=MS.gene29775.t1.exon6;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35414621 | 35414815 | 35414621 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35414989 | 35415075 | 35414989 | ID=MS.gene29775.t1.exon7;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35414989 | 35415075 | 35414989 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35415164 | 35415288 | 35415164 | ID=MS.gene29775.t1.exon8;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35415164 | 35415288 | 35415164 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35416537 | 35416629 | 35416537 | ID=MS.gene29775.t1.exon9;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35416537 | 35416629 | 35416537 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35416720 | 35416837 | 35416720 | ID=MS.gene29775.t1.exon10;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35416720 | 35416837 | 35416720 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| chr3.3 | exon | 35417435 | 35417584 | 35417435 | ID=MS.gene29775.t1.exon11;Parent=MS.gene29775.t1 |
| chr3.3 | CDS | 35417435 | 35417584 | 35417435 | ID=cds.MS.gene29775.t1;Parent=MS.gene29775.t1 |
| Gene Sequence |
| Protein sequence |
