Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30995.t1 | RHN69901.1 | 95 | 423 | 10 | 4 | 1 | 416 | 71 | 489 | 2.30E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30995.t1 | Q9FLF4 | 50.8 | 427 | 181 | 6 | 8 | 416 | 5 | 420 | 9.0e-109 | 395.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30995.t1 | G7JAZ3 | 95.0 | 423 | 10 | 4 | 1 | 416 | 1 | 419 | 1.6e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene30995 | -0.830214 | 3.33E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene30995 | 0.813588 | 2.37E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene30995 | -0.809696 | 1.67E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene30995 | -0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene30995 | 0.816476 | 5.42E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene30995 | -0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene30995 | 0.970909 | 2.44E-132 | -1.69E-46 |
| MS.gene049320 | MS.gene30995 | -0.81364 | 2.31E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene30995 | -0.821317 | 4.30E-53 | -1.69E-46 |
| MS.gene050129 | MS.gene30995 | 0.836014 | 1.20E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene30995 | -0.80874 | 2.67E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene30995 | -0.8043 | 2.31E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene30995 | -0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene30995 | 0.846891 | 1.63E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene30995 | -0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene30995 | -0.852579 | 4.21E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene30995 | -0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene30995 | -0.818114 | 2.32E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene30995 | -0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene30995 | -0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene30995 | -0.8401 | 1.07E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene30995 | -0.841346 | 5.02E-58 | -1.69E-46 |
| MS.gene050883 | MS.gene30995 | 0.835879 | 1.30E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene30995 | -0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene30995 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene30995 | 0.801341 | 9.42E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene30995 | 0.835332 | 1.79E-56 | -1.69E-46 |
| MS.gene051946 | MS.gene30995 | 0.864849 | 9.04E-65 | -1.69E-46 |
| MS.gene052164 | MS.gene30995 | -0.837253 | 5.80E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene30995 | -0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene30995 | -0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene30995 | -0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene052566 | MS.gene30995 | 0.824873 | 6.38E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene30995 | -0.806878 | 6.64E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene30995 | -0.811158 | 8.05E-51 | -1.69E-46 |
| MS.gene052937 | MS.gene30995 | 0.80818 | 3.52E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene30995 | -0.810418 | 1.16E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene30995 | -0.835747 | 1.40E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene30995 | 0.833241 | 5.97E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene30995 | 0.824569 | 7.52E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene30995 | 0.810706 | 1.01E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene30995 | -0.816347 | 5.79E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene30995 | -0.822324 | 2.52E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene30995 | 0.803751 | 3.00E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene30995 | -0.829133 | 6.10E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene30995 | -0.843275 | 1.55E-58 | -1.69E-46 |
| MS.gene054959 | MS.gene30995 | 0.807938 | 3.96E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene30995 | 0.801875 | 7.32E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene30995 | -0.826046 | 3.36E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene30995 | -0.840971 | 6.30E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene30995 | -0.837554 | 4.85E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene30995 | -0.84148 | 4.63E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene30995 | -0.809058 | 2.28E-50 | -1.69E-46 |
| MS.gene056310 | MS.gene30995 | 0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene056311 | MS.gene30995 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene056313 | MS.gene30995 | 0.810604 | 1.06E-50 | -1.69E-46 |
| MS.gene056408 | MS.gene30995 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene30995 | -0.844212 | 8.70E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene30995 | -0.845029 | 5.24E-59 | -1.69E-46 |
| MS.gene056550 | MS.gene30995 | 0.826074 | 3.31E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene30995 | 0.878682 | 2.31E-69 | -1.69E-46 |
| MS.gene058157 | MS.gene30995 | -0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene30995 | 0.822051 | 2.91E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene30995 | 0.802147 | 6.44E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene30995 | 0.815679 | 8.17E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene30995 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene30995 | -0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene30995 | -0.808647 | 2.79E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene30995 | -0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene30995 | -0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene30995 | -0.847786 | 9.28E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene30995 | -0.823693 | 1.21E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene30995 | 0.807683 | 4.48E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene30995 | -0.817208 | 3.72E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene30995 | -0.825457 | 4.64E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene30995 | -0.830608 | 2.67E-55 | -1.69E-46 |
| MS.gene060337 | MS.gene30995 | 0.808343 | 3.24E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene30995 | -0.815126 | 1.08E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene30995 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene30995 | -0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene30995 | -0.8127 | 3.72E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene30995 | -0.813418 | 2.59E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene30995 | -0.850683 | 1.45E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene30995 | -0.815204 | 1.04E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30995.t1 | MTR_3g095730 | 95.035 | 423 | 10 | 4 | 1 | 416 | 1 | 419 | 0.0 | 797 |
| MS.gene30995.t1 | MTR_8g092870 | 66.509 | 424 | 128 | 5 | 1 | 416 | 1 | 418 | 0.0 | 550 |
| MS.gene30995.t1 | MTR_7g106340 | 30.326 | 399 | 257 | 10 | 11 | 394 | 6 | 398 | 2.88e-37 | 140 |
| MS.gene30995.t1 | MTR_6g071340 | 26.777 | 422 | 267 | 14 | 11 | 405 | 3 | 409 | 9.16e-37 | 139 |
| MS.gene30995.t1 | MTR_5g077510 | 26.790 | 433 | 267 | 17 | 11 | 416 | 33 | 442 | 1.13e-36 | 139 |
| MS.gene30995.t1 | MTR_5g015210 | 29.851 | 402 | 253 | 7 | 1 | 398 | 58 | 434 | 8.51e-36 | 137 |
| MS.gene30995.t1 | MTR_5g048050 | 26.303 | 422 | 269 | 14 | 11 | 405 | 23 | 429 | 2.03e-33 | 130 |
| MS.gene30995.t1 | MTR_2g087350 | 27.949 | 390 | 265 | 8 | 11 | 394 | 4 | 383 | 9.77e-31 | 122 |
| MS.gene30995.t1 | MTR_1g056880 | 28.182 | 440 | 265 | 15 | 11 | 416 | 5 | 427 | 3.93e-29 | 118 |
| MS.gene30995.t1 | MTR_1g056870 | 28.182 | 440 | 265 | 15 | 11 | 416 | 5 | 427 | 2.29e-28 | 116 |
| MS.gene30995.t1 | MTR_1g017770 | 27.089 | 395 | 257 | 9 | 13 | 398 | 45 | 417 | 3.82e-28 | 115 |
| MS.gene30995.t1 | MTR_3g065080 | 23.515 | 421 | 281 | 12 | 11 | 409 | 34 | 435 | 5.42e-28 | 115 |
| MS.gene30995.t1 | MTR_4g063800 | 28.967 | 397 | 241 | 14 | 12 | 393 | 254 | 624 | 2.05e-27 | 115 |
| MS.gene30995.t1 | MTR_2g018010 | 25.935 | 428 | 252 | 14 | 1 | 396 | 280 | 674 | 4.44e-26 | 111 |
| MS.gene30995.t1 | MTR_4g485520 | 26.796 | 362 | 219 | 13 | 10 | 351 | 102 | 437 | 1.70e-25 | 108 |
| MS.gene30995.t1 | MTR_4g485520 | 26.796 | 362 | 219 | 13 | 10 | 351 | 270 | 605 | 2.74e-25 | 108 |
| MS.gene30995.t1 | MTR_1g056840 | 26.818 | 440 | 245 | 16 | 11 | 416 | 5 | 401 | 9.54e-24 | 102 |
| MS.gene30995.t1 | MTR_7g059405 | 25.990 | 404 | 247 | 13 | 13 | 397 | 264 | 634 | 1.58e-23 | 103 |
| MS.gene30995.t1 | MTR_4g051515 | 25.666 | 413 | 280 | 14 | 11 | 406 | 4 | 406 | 2.49e-23 | 101 |
| MS.gene30995.t1 | MTR_3g096370 | 29.787 | 282 | 175 | 8 | 11 | 279 | 8 | 279 | 7.83e-23 | 99.8 |
| MS.gene30995.t1 | MTR_4g085720 | 25.871 | 402 | 267 | 12 | 7 | 396 | 8 | 390 | 1.56e-22 | 99.0 |
| MS.gene30995.t1 | MTR_1g094215 | 26.790 | 377 | 223 | 12 | 13 | 363 | 64 | 413 | 1.97e-21 | 96.3 |
| MS.gene30995.t1 | MTR_1g056910 | 24.623 | 398 | 281 | 11 | 11 | 400 | 4 | 390 | 3.93e-21 | 95.1 |
| MS.gene30995.t1 | MTR_1g094215 | 27.200 | 375 | 224 | 13 | 13 | 363 | 247 | 596 | 4.01e-21 | 96.3 |
| MS.gene30995.t1 | MTR_7g078330 | 25.215 | 349 | 232 | 12 | 11 | 351 | 272 | 599 | 1.92e-19 | 90.9 |
| MS.gene30995.t1 | MTR_4g028960 | 49.275 | 69 | 35 | 0 | 11 | 79 | 278 | 346 | 5.65e-19 | 89.7 |
| MS.gene30995.t1 | MTR_4g107010 | 26.796 | 362 | 219 | 14 | 14 | 351 | 281 | 620 | 1.47e-18 | 88.6 |
| MS.gene30995.t1 | MTR_3g078160 | 23.775 | 408 | 260 | 12 | 14 | 396 | 276 | 657 | 1.12e-17 | 85.9 |
| MS.gene30995.t1 | MTR_3g078160 | 23.775 | 408 | 260 | 12 | 14 | 396 | 276 | 657 | 1.29e-17 | 85.5 |
| MS.gene30995.t1 | MTR_4g091880 | 53.623 | 69 | 31 | 1 | 13 | 80 | 5 | 73 | 3.31e-17 | 82.8 |
| MS.gene30995.t1 | MTR_4g091880 | 53.623 | 69 | 31 | 1 | 13 | 80 | 5 | 73 | 3.33e-17 | 83.2 |
| MS.gene30995.t1 | MTR_5g083030 | 24.267 | 375 | 229 | 12 | 9 | 351 | 289 | 640 | 3.59e-17 | 84.3 |
| MS.gene30995.t1 | MTR_7g053260 | 44.286 | 70 | 39 | 0 | 11 | 80 | 76 | 145 | 8.36e-16 | 79.3 |
| MS.gene30995.t1 | MTR_1g069845 | 42.029 | 69 | 40 | 0 | 11 | 79 | 122 | 190 | 1.09e-15 | 79.3 |
| MS.gene30995.t1 | MTR_7g117890 | 25.000 | 320 | 198 | 10 | 17 | 329 | 259 | 543 | 1.16e-15 | 79.7 |
| MS.gene30995.t1 | MTR_7g097020 | 43.662 | 71 | 40 | 0 | 11 | 81 | 239 | 309 | 2.05e-15 | 79.0 |
| MS.gene30995.t1 | MTR_1g069845 | 42.029 | 69 | 40 | 0 | 11 | 79 | 243 | 311 | 2.16e-15 | 78.6 |
| MS.gene30995.t1 | MTR_1g069845 | 42.029 | 69 | 40 | 0 | 11 | 79 | 239 | 307 | 2.19e-15 | 78.6 |
| MS.gene30995.t1 | MTR_5g034440 | 50.769 | 65 | 32 | 0 | 17 | 81 | 284 | 348 | 9.78e-15 | 76.6 |
| MS.gene30995.t1 | MTR_3g078160 | 48.438 | 64 | 33 | 0 | 14 | 77 | 276 | 339 | 8.05e-14 | 73.6 |
| MS.gene30995.t1 | MTR_7g116600 | 48.485 | 66 | 34 | 0 | 14 | 79 | 79 | 144 | 1.22e-13 | 72.8 |
| MS.gene30995.t1 | MTR_3g085610 | 41.176 | 68 | 40 | 0 | 14 | 81 | 281 | 348 | 1.22e-13 | 73.2 |
| MS.gene30995.t1 | MTR_1g093965 | 52.632 | 57 | 27 | 0 | 26 | 82 | 1 | 57 | 3.89e-13 | 68.2 |
| MS.gene30995.t1 | MTR_3g466220 | 41.667 | 72 | 42 | 0 | 11 | 82 | 231 | 302 | 1.12e-12 | 70.5 |
| MS.gene30995.t1 | MTR_3g466220 | 41.667 | 72 | 42 | 0 | 11 | 82 | 210 | 281 | 1.14e-12 | 70.5 |
| MS.gene30995.t1 | MTR_2g011140 | 50.000 | 60 | 30 | 0 | 17 | 76 | 19 | 78 | 2.08e-12 | 68.6 |
| MS.gene30995.t1 | MTR_1g093995 | 50.877 | 57 | 28 | 0 | 26 | 82 | 1 | 57 | 2.49e-12 | 65.9 |
| MS.gene30995.t1 | MTR_7g077780 | 42.029 | 69 | 40 | 0 | 14 | 82 | 827 | 895 | 2.93e-12 | 68.9 |
| MS.gene30995.t1 | MTR_1g079450 | 40.845 | 71 | 42 | 0 | 9 | 79 | 59 | 129 | 5.37e-12 | 67.8 |
| MS.gene30995.t1 | MTR_8g077205 | 43.478 | 69 | 39 | 0 | 11 | 79 | 161 | 229 | 7.80e-12 | 67.4 |
| MS.gene30995.t1 | MTR_8g077205 | 43.478 | 69 | 39 | 0 | 11 | 79 | 273 | 341 | 9.02e-12 | 67.4 |
| MS.gene30995.t1 | MTR_8g080280 | 38.235 | 68 | 42 | 0 | 14 | 81 | 283 | 350 | 1.12e-11 | 67.0 |
| MS.gene30995.t1 | MTR_3g008270 | 45.455 | 66 | 35 | 1 | 14 | 79 | 731 | 795 | 1.51e-11 | 66.6 |
| MS.gene30995.t1 | MTR_5g020570 | 39.130 | 69 | 42 | 0 | 11 | 79 | 271 | 339 | 1.77e-11 | 66.6 |
| MS.gene30995.t1 | MTR_1g100820 | 43.284 | 67 | 38 | 0 | 13 | 79 | 648 | 714 | 1.79e-11 | 66.6 |
| MS.gene30995.t1 | MTR_1g100820 | 43.284 | 67 | 38 | 0 | 13 | 79 | 646 | 712 | 1.84e-11 | 66.6 |
| MS.gene30995.t1 | MTR_5g020570 | 39.130 | 69 | 42 | 0 | 11 | 79 | 286 | 354 | 2.11e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30995.t1 | AT5G64660 | 50.935 | 428 | 179 | 7 | 8 | 416 | 5 | 420 | 3.27e-138 | 402 |
| MS.gene30995.t1 | AT5G09800 | 51.781 | 421 | 181 | 8 | 5 | 416 | 2 | 409 | 1.54e-129 | 379 |
| MS.gene30995.t1 | AT3G18710 | 49.289 | 422 | 182 | 13 | 11 | 416 | 10 | 415 | 1.73e-123 | 364 |
| MS.gene30995.t1 | AT2G35930 | 27.041 | 392 | 277 | 6 | 6 | 394 | 5 | 390 | 1.20e-35 | 135 |
| MS.gene30995.t1 | AT3G52450 | 26.905 | 420 | 269 | 10 | 7 | 394 | 1 | 414 | 4.02e-33 | 129 |
| MS.gene30995.t1 | AT1G66160 | 24.685 | 397 | 264 | 10 | 11 | 395 | 31 | 404 | 1.22e-32 | 128 |
| MS.gene30995.t1 | AT3G19380 | 27.320 | 388 | 256 | 10 | 7 | 381 | 8 | 382 | 3.40e-32 | 126 |
| MS.gene30995.t1 | AT3G49810 | 26.943 | 386 | 256 | 8 | 13 | 394 | 64 | 427 | 3.92e-29 | 118 |
| MS.gene30995.t1 | AT1G49780 | 27.059 | 425 | 284 | 9 | 7 | 416 | 8 | 421 | 5.66e-28 | 114 |
| MS.gene30995.t1 | AT5G37490 | 25.926 | 405 | 268 | 11 | 11 | 400 | 29 | 416 | 6.70e-26 | 109 |
| MS.gene30995.t1 | AT3G46510 | 28.249 | 354 | 216 | 12 | 13 | 351 | 256 | 586 | 8.13e-26 | 110 |
| MS.gene30995.t1 | AT3G54850 | 27.778 | 360 | 211 | 13 | 13 | 351 | 248 | 579 | 2.27e-24 | 105 |
| MS.gene30995.t1 | AT2G28830 | 26.034 | 411 | 251 | 14 | 14 | 400 | 185 | 566 | 6.22e-24 | 104 |
| MS.gene30995.t1 | AT1G23030 | 25.735 | 408 | 252 | 17 | 11 | 402 | 239 | 611 | 6.77e-24 | 104 |
| MS.gene30995.t1 | AT1G66160 | 22.922 | 397 | 255 | 11 | 11 | 395 | 31 | 388 | 7.96e-23 | 100 |
| MS.gene30995.t1 | AT1G71020 | 28.904 | 301 | 174 | 11 | 11 | 291 | 93 | 373 | 6.79e-22 | 97.8 |
| MS.gene30995.t1 | AT1G71020 | 28.904 | 301 | 174 | 11 | 11 | 291 | 241 | 521 | 1.26e-21 | 97.8 |
| MS.gene30995.t1 | AT1G29340 | 25.400 | 437 | 260 | 15 | 1 | 405 | 293 | 695 | 4.81e-21 | 96.3 |
| MS.gene30995.t1 | AT4G21350 | 24.936 | 393 | 257 | 10 | 9 | 392 | 1 | 364 | 2.60e-20 | 92.4 |
| MS.gene30995.t1 | AT3G11840 | 23.310 | 429 | 273 | 10 | 11 | 393 | 8 | 426 | 1.36e-19 | 90.9 |
| MS.gene30995.t1 | AT5G42340 | 27.798 | 277 | 176 | 10 | 11 | 280 | 288 | 547 | 2.81e-19 | 90.5 |
| MS.gene30995.t1 | AT5G65920 | 53.731 | 67 | 31 | 0 | 13 | 79 | 60 | 126 | 6.38e-18 | 85.9 |
| MS.gene30995.t1 | AT5G65920 | 26.904 | 197 | 139 | 2 | 198 | 394 | 232 | 423 | 1.64e-11 | 66.2 |
| MS.gene30995.t1 | AT5G65920 | 53.731 | 67 | 31 | 0 | 13 | 79 | 60 | 126 | 6.38e-18 | 85.9 |
| MS.gene30995.t1 | AT5G65920 | 26.904 | 197 | 139 | 2 | 198 | 394 | 232 | 423 | 1.64e-11 | 66.2 |
| MS.gene30995.t1 | AT5G01830 | 50.746 | 67 | 33 | 0 | 13 | 79 | 274 | 340 | 1.53e-17 | 85.5 |
| MS.gene30995.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 200 | 271 | 1.31e-16 | 82.4 |
| MS.gene30995.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 236 | 307 | 1.88e-16 | 82.0 |
| MS.gene30995.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 236 | 307 | 1.88e-16 | 82.0 |
| MS.gene30995.t1 | AT3G07360 | 43.478 | 69 | 39 | 0 | 11 | 79 | 72 | 140 | 2.65e-15 | 77.8 |
| MS.gene30995.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.45e-14 | 73.9 |
| MS.gene30995.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.45e-14 | 73.9 |
| MS.gene30995.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.45e-14 | 73.9 |
| MS.gene30995.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 1.02e-13 | 73.2 |
| MS.gene30995.t1 | AT1G24330 | 42.647 | 68 | 39 | 0 | 14 | 81 | 276 | 343 | 2.00e-13 | 72.8 |
| MS.gene30995.t1 | AT1G24330 | 42.647 | 68 | 39 | 0 | 14 | 81 | 276 | 343 | 2.00e-13 | 72.8 |
| MS.gene30995.t1 | AT1G01660 | 43.939 | 66 | 37 | 0 | 14 | 79 | 498 | 563 | 2.38e-13 | 72.4 |
| MS.gene30995.t1 | AT1G01660 | 43.939 | 66 | 37 | 0 | 14 | 79 | 499 | 564 | 2.43e-13 | 72.0 |
| MS.gene30995.t1 | AT1G10560 | 25.839 | 298 | 185 | 10 | 19 | 296 | 294 | 575 | 3.38e-13 | 72.0 |
| MS.gene30995.t1 | AT1G27910 | 42.647 | 68 | 39 | 0 | 14 | 81 | 280 | 347 | 2.41e-12 | 69.3 |
| MS.gene30995.t1 | AT5G18330 | 23.864 | 352 | 243 | 10 | 11 | 355 | 63 | 396 | 1.41e-11 | 66.2 |
| MS.gene30995.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 234 | 296 | 2.13e-11 | 66.2 |
| MS.gene30995.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 234 | 296 | 2.13e-11 | 66.2 |
| MS.gene30995.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 237 | 299 | 2.15e-11 | 66.2 |
| MS.gene30995.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 45 | 107 | 2.74e-11 | 65.9 |
| MS.gene30995.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 45 | 107 | 2.74e-11 | 65.9 |
Find 88 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGAAACTGGTGAAAAT+TGG | 0.295758 | 3.3:+79298444 | MS.gene30995:CDS |
| AGGCATAATATGTGAAGTTT+TGG | 0.306287 | 3.3:-79298859 | None:intergenic |
| GTCTAACCAGCGTTGGATAC+TGG | 0.313560 | 3.3:-79297758 | None:intergenic |
| AACGGTGTTAGGTTTGGTTC+TGG | 0.333260 | 3.3:+79298128 | MS.gene30995:CDS |
| CCAATCTCCATAAATCAAAA+AGG | 0.335548 | 3.3:-79298879 | None:intergenic |
| TTCATAACGTCGAGTGAGAT+TGG | 0.354545 | 3.3:-79297694 | None:intergenic |
| GAACAGACTTTAACGGTGTT+AGG | 0.356980 | 3.3:+79298117 | MS.gene30995:CDS |
| ACACCGGTGCAAAGACTAAC+AGG | 0.363281 | 3.3:-79297721 | None:intergenic |
| ATTTCTTGAACAGACTTTAA+CGG | 0.373579 | 3.3:+79298110 | MS.gene30995:CDS |
| ACGGTTAGGTACAAAATCTT+TGG | 0.375445 | 3.3:-79297824 | None:intergenic |
| AGTTTCTGTTTGTTCCGTTT+CGG | 0.376803 | 3.3:-79298432 | None:intergenic |
| TAAACCGAACCGGTTTAAAC+CGG | 0.401538 | 3.3:-79297968 | None:intergenic |
| GACTTTAACGGTGTTAGGTT+TGG | 0.408394 | 3.3:+79298122 | MS.gene30995:CDS |
| GAACCGAATCGGTCCAGATC+TGG | 0.410843 | 3.3:-79297864 | None:intergenic |
| TCAAGAAAACTAACCATTAA+CGG | 0.410858 | 3.3:-79298066 | None:intergenic |
| GAAACGGAACAAACAGAAAC+TGG | 0.418763 | 3.3:+79298434 | MS.gene30995:CDS |
| CTAATTTCGCGAGAAAAGTT+CGG | 0.427400 | 3.3:-79298032 | None:intergenic |
| GAAGCAGTTACGATGGCTAA+TGG | 0.436021 | 3.3:+79298717 | MS.gene30995:CDS |
| GTGTGAAGACGCGGGGTTTG+TGG | 0.454044 | 3.3:+79298590 | MS.gene30995:CDS |
| TAGCCTCATCCGGTTTAAAC+CGG | 0.457213 | 3.3:+79297959 | MS.gene30995:CDS |
| GGGAAGTATTTGCATGGTGG+CGG | 0.461122 | 3.3:-79297800 | None:intergenic |
| CGAAGATAGATTCAGCAATT+CGG | 0.463703 | 3.3:-79298349 | None:intergenic |
| TCATAACGTCGAGTGAGATT+GGG | 0.470373 | 3.3:-79297693 | None:intergenic |
| CTTTCGTGATTAAACCGAAC+CGG | 0.470487 | 3.3:-79297978 | None:intergenic |
| CATCCAGATCTGGACCGATT+CGG | 0.478094 | 3.3:+79297861 | MS.gene30995:CDS |
| GGTTCATCACCGGGTCGAAC+CGG | 0.478104 | 3.3:+79297882 | MS.gene30995:CDS |
| TACATAGTCTCATCCAGATC+TGG | 0.479419 | 3.3:+79297851 | MS.gene30995:CDS |
| CTAAGTCGGTGATGGTTTGA+AGG | 0.487003 | 3.3:-79297939 | None:intergenic |
| GGAAGTATTTGCATGGTGGC+GGG | 0.489867 | 3.3:-79297799 | None:intergenic |
| GAAGGTGACCGTGGTGGAGA+AGG | 0.494216 | 3.3:+79298515 | MS.gene30995:CDS |
| GGACCGATTCGGTTCATCAC+CGG | 0.498704 | 3.3:+79297872 | MS.gene30995:CDS |
| TGAGATTGGGCATTTGAAGA+AGG | 0.502277 | 3.3:-79297680 | None:intergenic |
| GATTGGGCATTTGAAGAAGG+TGG | 0.504488 | 3.3:-79297677 | None:intergenic |
| GACCGATTCGGTTCATCACC+GGG | 0.508430 | 3.3:+79297873 | MS.gene30995:CDS |
| TTGAAGAACCTTGTGTTGAA+AGG | 0.511575 | 3.3:+79298174 | MS.gene30995:CDS |
| TCATCCGGTTTAAACCGGTT+CGG | 0.515676 | 3.3:+79297964 | MS.gene30995:CDS |
| CGGCGATACTGAATAAGATT+CGG | 0.518377 | 3.3:+79298613 | MS.gene30995:CDS |
| GGTGGAGAAGGCGTTGAAGC+TGG | 0.521064 | 3.3:+79298527 | MS.gene30995:CDS |
| ATCAGCTTCGAATCATTCTC+CGG | 0.528248 | 3.3:-79298372 | None:intergenic |
| GTTAGGTACAAAATCTTTGG+TGG | 0.531775 | 3.3:-79297821 | None:intergenic |
| TGTTCTTTCCTTTCAACACA+AGG | 0.541607 | 3.3:-79298182 | None:intergenic |
| AGACTATGTAGAGTACGGTT+AGG | 0.544129 | 3.3:-79297838 | None:intergenic |
| ATCACCGACTTAGCCTCATC+CGG | 0.544356 | 3.3:+79297949 | MS.gene30995:CDS |
| AACAACTCTTTCTCTAACCA+TGG | 0.546792 | 3.3:-79297635 | None:intergenic |
| TCCCCTGTTAGTCTTTGCAC+CGG | 0.548826 | 3.3:+79297718 | MS.gene30995:CDS |
| TAGCAATCTCAAAACCGAAA+CGG | 0.555669 | 3.3:+79298418 | MS.gene30995:CDS |
| ACAGCGTCTTCAACGAGTGA+AGG | 0.557046 | 3.3:+79298555 | MS.gene30995:CDS |
| GAGAAAAGTTCGGTTCTGAT+CGG | 0.560096 | 3.3:-79298022 | None:intergenic |
| GTACACATTTGTCGAACTTG+TGG | 0.562241 | 3.3:-79298780 | None:intergenic |
| GACCCGGTGATGAACCGAAT+CGG | 0.567434 | 3.3:-79297875 | None:intergenic |
| AAGAGAGATGTGTGAAGACG+CGG | 0.568054 | 3.3:+79298581 | MS.gene30995:CDS |
| AGAGAGATGTGTGAAGACGC+GGG | 0.574075 | 3.3:+79298582 | MS.gene30995:CDS |
| ATTGGGCATTTGAAGAAGGT+GGG | 0.577047 | 3.3:-79297676 | None:intergenic |
| TTGGATACTGGAACGGTCGT+AGG | 0.577907 | 3.3:-79297746 | None:intergenic |
| AGCGATGAATTTCAAAACCC+TGG | 0.578181 | 3.3:-79298277 | None:intergenic |
| CAGCGTCTTCAACGAGTGAA+GGG | 0.578889 | 3.3:+79298556 | MS.gene30995:CDS |
| GGATGAGACTATGTAGAGTA+CGG | 0.580632 | 3.3:-79297843 | None:intergenic |
| ATTGCTGAATCTATCTTCGC+CGG | 0.591644 | 3.3:+79298353 | MS.gene30995:CDS |
| TACCGTCGTCTAACCAGCGT+TGG | 0.592830 | 3.3:-79297765 | None:intergenic |
| GAACCGGTTTAAACCGGATG+AGG | 0.595940 | 3.3:-79297962 | None:intergenic |
| TGTTCATTAGAAAGAACTGA+AGG | 0.601064 | 3.3:-79297913 | None:intergenic |
| GTGAAACGACCGGTTCGACC+CGG | 0.612430 | 3.3:-79297891 | None:intergenic |
| AGAACTGAAGGTGAAACGAC+CGG | 0.616111 | 3.3:-79297901 | None:intergenic |
| GGATGAGGCTAAGTCGGTGA+TGG | 0.616650 | 3.3:-79297947 | None:intergenic |
| TTAGGTACAAAATCTTTGGT+GGG | 0.617972 | 3.3:-79297820 | None:intergenic |
| TAAACCGGATGAGGCTAAGT+CGG | 0.629808 | 3.3:-79297953 | None:intergenic |
| ACAAGTTCGACAAATGTGTA+CGG | 0.630403 | 3.3:+79298782 | MS.gene30995:CDS |
| TTCAAGAATCACAACCACCA+GGG | 0.633736 | 3.3:+79298260 | MS.gene30995:CDS |
| TGAAGACGCGGGGTTTGTGG+CGG | 0.634262 | 3.3:+79298593 | MS.gene30995:CDS |
| GGAACGGTCGTAGGTGACAC+CGG | 0.634285 | 3.3:-79297737 | None:intergenic |
| TTTGGTGGGAAGTATTTGCA+TGG | 0.634607 | 3.3:-79297806 | None:intergenic |
| AGAGTCTAATACGAGCGTGA+AGG | 0.640411 | 3.3:+79298497 | MS.gene30995:CDS |
| GAATGTATCGAACGTTGCGA+CGG | 0.642403 | 3.3:+79298635 | MS.gene30995:CDS |
| ATTCAAGAATCACAACCACC+AGG | 0.646164 | 3.3:+79298259 | MS.gene30995:CDS |
| AGCACGCAGTAACGACGCTG+TGG | 0.651564 | 3.3:+79298658 | MS.gene30995:CDS |
| GAGAGATGTGTGAAGACGCG+GGG | 0.656707 | 3.3:+79298583 | MS.gene30995:CDS |
| GGTGGGAAGTATTTGCATGG+TGG | 0.659091 | 3.3:-79297803 | None:intergenic |
| GGAGAAGGCGTTGAAGCTGG+TGG | 0.660376 | 3.3:+79298530 | MS.gene30995:CDS |
| TACGAGCGTGAAGGTGACCG+TGG | 0.665169 | 3.3:+79298506 | MS.gene30995:CDS |
| AGCACAAGAAGCAGTTACGA+TGG | 0.668634 | 3.3:+79298710 | MS.gene30995:CDS |
| ACCAGCGTTGGATACTGGAA+CGG | 0.669208 | 3.3:-79297753 | None:intergenic |
| CACCGGTGCAAAGACTAACA+GGG | 0.672559 | 3.3:-79297720 | None:intergenic |
| GAGCGTGAAGGTGACCGTGG+TGG | 0.673784 | 3.3:+79298509 | MS.gene30995:CDS |
| ACCGTTCCAGTATCCAACGC+TGG | 0.677562 | 3.3:+79297752 | MS.gene30995:CDS |
| ACCGGTGCAAAGACTAACAG+GGG | 0.687573 | 3.3:-79297719 | None:intergenic |
| GATGAATTTCAAAACCCTGG+TGG | 0.695060 | 3.3:-79298274 | None:intergenic |
| CTTCAACGCCTTCTCCACCA+CGG | 0.698423 | 3.3:-79298523 | None:intergenic |
| ATCCAACGCTGGTTAGACGA+CGG | 0.729186 | 3.3:+79297763 | MS.gene30995:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTTCTTGAACAGACTTTAA+CGG | + | chr3.3:79298110-79298129 | MS.gene30995:CDS | 25.0% |
| ! | GAACAAAAACAAAAAATGCT+TGG | + | chr3.3:79298200-79298219 | MS.gene30995:CDS | 25.0% |
| ! | TCAAGAAAACTAACCATTAA+CGG | - | chr3.3:79298069-79298088 | None:intergenic | 25.0% |
| !!! | ATGGTTCTTGTTTTACAAAA+AGG | + | chr3.3:79298228-79298247 | MS.gene30995:CDS | 25.0% |
| AAACAGAAACTGGTGAAAAT+TGG | + | chr3.3:79298444-79298463 | MS.gene30995:CDS | 30.0% | |
| CAAAAAATGCTTGGATTCAA+TGG | + | chr3.3:79298209-79298228 | MS.gene30995:CDS | 30.0% | |
| GAAAAAATTGAAGATCGTGA+AGG | + | chr3.3:79298150-79298169 | MS.gene30995:CDS | 30.0% | |
| TGTTCATTAGAAAGAACTGA+AGG | - | chr3.3:79297916-79297935 | None:intergenic | 30.0% | |
| TTAGGTACAAAATCTTTGGT+GGG | - | chr3.3:79297823-79297842 | None:intergenic | 30.0% | |
| ! | AGGCATAATATGTGAAGTTT+TGG | - | chr3.3:79298862-79298881 | None:intergenic | 30.0% |
| !! | CGGATTTGCTTAAGATTTTT+CGG | + | chr3.3:79298802-79298821 | MS.gene30995:CDS | 30.0% |
| !! | GGATTTGCTTAAGATTTTTC+GGG | + | chr3.3:79298803-79298822 | MS.gene30995:CDS | 30.0% |
| ACAAGTTCGACAAATGTGTA+CGG | + | chr3.3:79298782-79298801 | MS.gene30995:CDS | 35.0% | |
| ACGGTTAGGTACAAAATCTT+TGG | - | chr3.3:79297827-79297846 | None:intergenic | 35.0% | |
| AGTTTCTGTTTGTTCCGTTT+CGG | - | chr3.3:79298435-79298454 | None:intergenic | 35.0% | |
| CGAAGATAGATTCAGCAATT+CGG | - | chr3.3:79298352-79298371 | None:intergenic | 35.0% | |
| CTAATTTCGCGAGAAAAGTT+CGG | - | chr3.3:79298035-79298054 | None:intergenic | 35.0% | |
| GTTAGGTACAAAATCTTTGG+TGG | - | chr3.3:79297824-79297843 | None:intergenic | 35.0% | |
| TAGCAATCTCAAAACCGAAA+CGG | + | chr3.3:79298418-79298437 | MS.gene30995:CDS | 35.0% | |
| TGTTCTTTCCTTTCAACACA+AGG | - | chr3.3:79298185-79298204 | None:intergenic | 35.0% | |
| TTGAAGAACCTTGTGTTGAA+AGG | + | chr3.3:79298174-79298193 | MS.gene30995:CDS | 35.0% | |
| ! | ACTTTTCTCGCGAAATTAGA+CGG | + | chr3.3:79298036-79298055 | MS.gene30995:CDS | 35.0% |
| !!! | AGACGGTTTTATTCCGTTAA+TGG | + | chr3.3:79298053-79298072 | MS.gene30995:CDS | 35.0% |
| AGACTATGTAGAGTACGGTT+AGG | - | chr3.3:79297841-79297860 | None:intergenic | 40.0% | |
| AGCGATGAATTTCAAAACCC+TGG | - | chr3.3:79298280-79298299 | None:intergenic | 40.0% | |
| ATCAGCTTCGAATCATTCTC+CGG | - | chr3.3:79298375-79298394 | None:intergenic | 40.0% | |
| ATTCAAGAATCACAACCACC+AGG | + | chr3.3:79298259-79298278 | MS.gene30995:CDS | 40.0% | |
| ATTGCTGAATCTATCTTCGC+CGG | + | chr3.3:79298353-79298372 | MS.gene30995:CDS | 40.0% | |
| ATTGGGCATTTGAAGAAGGT+GGG | - | chr3.3:79297679-79297698 | None:intergenic | 40.0% | |
| CGGCGATACTGAATAAGATT+CGG | + | chr3.3:79298613-79298632 | MS.gene30995:CDS | 40.0% | |
| CTTTCGTGATTAAACCGAAC+CGG | - | chr3.3:79297981-79298000 | None:intergenic | 40.0% | |
| GAAACGGAACAAACAGAAAC+TGG | + | chr3.3:79298434-79298453 | MS.gene30995:CDS | 40.0% | |
| GAACAGACTTTAACGGTGTT+AGG | + | chr3.3:79298117-79298136 | MS.gene30995:CDS | 40.0% | |
| GATGAATTTCAAAACCCTGG+TGG | - | chr3.3:79298277-79298296 | None:intergenic | 40.0% | |
| GGATGAGACTATGTAGAGTA+CGG | - | chr3.3:79297846-79297865 | None:intergenic | 40.0% | |
| GTACACATTTGTCGAACTTG+TGG | - | chr3.3:79298783-79298802 | None:intergenic | 40.0% | |
| TACATAGTCTCATCCAGATC+TGG | + | chr3.3:79297851-79297870 | MS.gene30995:CDS | 40.0% | |
| TCATAACGTCGAGTGAGATT+GGG | - | chr3.3:79297696-79297715 | None:intergenic | 40.0% | |
| TGAGATTGGGCATTTGAAGA+AGG | - | chr3.3:79297683-79297702 | None:intergenic | 40.0% | |
| TTCAAGAATCACAACCACCA+GGG | + | chr3.3:79298260-79298279 | MS.gene30995:CDS | 40.0% | |
| TTCATAACGTCGAGTGAGAT+TGG | - | chr3.3:79297697-79297716 | None:intergenic | 40.0% | |
| ! | GACTTTAACGGTGTTAGGTT+TGG | + | chr3.3:79298122-79298141 | MS.gene30995:CDS | 40.0% |
| ! | GAGAAAAGTTCGGTTCTGAT+CGG | - | chr3.3:79298025-79298044 | None:intergenic | 40.0% |
| ! | TAAACCGAACCGGTTTAAAC+CGG | - | chr3.3:79297971-79297990 | None:intergenic | 40.0% |
| !! | TTTGGTGGGAAGTATTTGCA+TGG | - | chr3.3:79297809-79297828 | None:intergenic | 40.0% |
| AAGAGAGATGTGTGAAGACG+CGG | + | chr3.3:79298581-79298600 | MS.gene30995:CDS | 45.0% | |
| AGAACTGAAGGTGAAACGAC+CGG | - | chr3.3:79297904-79297923 | None:intergenic | 45.0% | |
| AGAGTCTAATACGAGCGTGA+AGG | + | chr3.3:79298497-79298516 | MS.gene30995:CDS | 45.0% | |
| AGCACAAGAAGCAGTTACGA+TGG | + | chr3.3:79298710-79298729 | MS.gene30995:CDS | 45.0% | |
| GAAGCAGTTACGATGGCTAA+TGG | + | chr3.3:79298717-79298736 | MS.gene30995:CDS | 45.0% | |
| GAATGTATCGAACGTTGCGA+CGG | + | chr3.3:79298635-79298654 | MS.gene30995:CDS | 45.0% | |
| GATTGGGCATTTGAAGAAGG+TGG | - | chr3.3:79297680-79297699 | None:intergenic | 45.0% | |
| TAAACCGGATGAGGCTAAGT+CGG | - | chr3.3:79297956-79297975 | None:intergenic | 45.0% | |
| TAGCCTCATCCGGTTTAAAC+CGG | + | chr3.3:79297959-79297978 | MS.gene30995:CDS | 45.0% | |
| TCATCCGGTTTAAACCGGTT+CGG | + | chr3.3:79297964-79297983 | MS.gene30995:CDS | 45.0% | |
| ! | AACGGTGTTAGGTTTGGTTC+TGG | + | chr3.3:79298128-79298147 | MS.gene30995:CDS | 45.0% |
| ! | CTAAGTCGGTGATGGTTTGA+AGG | - | chr3.3:79297942-79297961 | None:intergenic | 45.0% |
| ACACCGGTGCAAAGACTAAC+AGG | - | chr3.3:79297724-79297743 | None:intergenic | 50.0% | |
| ACAGCGTCTTCAACGAGTGA+AGG | + | chr3.3:79298555-79298574 | MS.gene30995:CDS | 50.0% | |
| ACCGGTGCAAAGACTAACAG+GGG | - | chr3.3:79297722-79297741 | None:intergenic | 50.0% | |
| AGAGAGATGTGTGAAGACGC+GGG | + | chr3.3:79298582-79298601 | MS.gene30995:CDS | 50.0% | |
| CACCGGTGCAAAGACTAACA+GGG | - | chr3.3:79297723-79297742 | None:intergenic | 50.0% | |
| CAGCGTCTTCAACGAGTGAA+GGG | + | chr3.3:79298556-79298575 | MS.gene30995:CDS | 50.0% | |
| CATCCAGATCTGGACCGATT+CGG | + | chr3.3:79297861-79297880 | MS.gene30995:CDS | 50.0% | |
| TTGGATACTGGAACGGTCGT+AGG | - | chr3.3:79297749-79297768 | None:intergenic | 50.0% | |
| ! | ACCAGCGTTGGATACTGGAA+CGG | - | chr3.3:79297756-79297775 | None:intergenic | 50.0% |
| ! | ATCCAACGCTGGTTAGACGA+CGG | + | chr3.3:79297763-79297782 | MS.gene30995:CDS | 50.0% |
| ! | GAACCGGTTTAAACCGGATG+AGG | - | chr3.3:79297965-79297984 | None:intergenic | 50.0% |
| ! | GTCTAACCAGCGTTGGATAC+TGG | - | chr3.3:79297761-79297780 | None:intergenic | 50.0% |
| !! | ATCACCGACTTAGCCTCATC+CGG | + | chr3.3:79297949-79297968 | MS.gene30995:CDS | 50.0% |
| !! | GGAAGTATTTGCATGGTGGC+GGG | - | chr3.3:79297802-79297821 | None:intergenic | 50.0% |
| !! | GGGAAGTATTTGCATGGTGG+CGG | - | chr3.3:79297803-79297822 | None:intergenic | 50.0% |
| !! | GGTGGGAAGTATTTGCATGG+TGG | - | chr3.3:79297806-79297825 | None:intergenic | 50.0% |
| !! | TCCCCTGTTAGTCTTTGCAC+CGG | + | chr3.3:79297718-79297737 | MS.gene30995:CDS | 50.0% |
| ACCGTTCCAGTATCCAACGC+TGG | + | chr3.3:79297752-79297771 | MS.gene30995:CDS | 55.0% | |
| CTTCAACGCCTTCTCCACCA+CGG | - | chr3.3:79298526-79298545 | None:intergenic | 55.0% | |
| GAACCGAATCGGTCCAGATC+TGG | - | chr3.3:79297867-79297886 | None:intergenic | 55.0% | |
| GACCCGGTGATGAACCGAAT+CGG | - | chr3.3:79297878-79297897 | None:intergenic | 55.0% | |
| GAGAGATGTGTGAAGACGCG+GGG | + | chr3.3:79298583-79298602 | MS.gene30995:CDS | 55.0% | |
| GGATGAGGCTAAGTCGGTGA+TGG | - | chr3.3:79297950-79297969 | None:intergenic | 55.0% | |
| TACCGTCGTCTAACCAGCGT+TGG | - | chr3.3:79297768-79297787 | None:intergenic | 55.0% | |
| !! | GACCGATTCGGTTCATCACC+GGG | + | chr3.3:79297873-79297892 | MS.gene30995:CDS | 55.0% |
| !! | GGACCGATTCGGTTCATCAC+CGG | + | chr3.3:79297872-79297891 | MS.gene30995:CDS | 55.0% |
| AGCACGCAGTAACGACGCTG+TGG | + | chr3.3:79298658-79298677 | MS.gene30995:CDS | 60.0% | |
| GGAACGGTCGTAGGTGACAC+CGG | - | chr3.3:79297740-79297759 | None:intergenic | 60.0% | |
| GGTTCATCACCGGGTCGAAC+CGG | + | chr3.3:79297882-79297901 | MS.gene30995:CDS | 60.0% | |
| GTGTGAAGACGCGGGGTTTG+TGG | + | chr3.3:79298590-79298609 | MS.gene30995:CDS | 60.0% | |
| TACGAGCGTGAAGGTGACCG+TGG | + | chr3.3:79298506-79298525 | MS.gene30995:CDS | 60.0% | |
| TGAAGACGCGGGGTTTGTGG+CGG | + | chr3.3:79298593-79298612 | MS.gene30995:CDS | 60.0% | |
| ! | GAAGGTGACCGTGGTGGAGA+AGG | + | chr3.3:79298515-79298534 | MS.gene30995:CDS | 60.0% |
| !! | GGAGAAGGCGTTGAAGCTGG+TGG | + | chr3.3:79298530-79298549 | MS.gene30995:CDS | 60.0% |
| !! | GGTGGAGAAGGCGTTGAAGC+TGG | + | chr3.3:79298527-79298546 | MS.gene30995:CDS | 60.0% |
| !! | GTGAAACGACCGGTTCGACC+CGG | - | chr3.3:79297894-79297913 | None:intergenic | 60.0% |
| GAGCGTGAAGGTGACCGTGG+TGG | + | chr3.3:79298509-79298528 | MS.gene30995:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79297637 | 79298887 | 79297637 | ID=MS.gene30995 |
| chr3.3 | mRNA | 79297637 | 79298887 | 79297637 | ID=MS.gene30995.t1;Parent=MS.gene30995 |
| chr3.3 | exon | 79297637 | 79298887 | 79297637 | ID=MS.gene30995.t1.exon1;Parent=MS.gene30995.t1 |
| chr3.3 | CDS | 79297637 | 79298887 | 79297637 | ID=cds.MS.gene30995.t1;Parent=MS.gene30995.t1 |
| Gene Sequence |
| Protein sequence |
