Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64670.t1 | RHN80631.1 | 92.3 | 927 | 71 | 0 | 2 | 928 | 68 | 994 | 0.00E+00 | 1547.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64670.t1 | Q9NW13 | 41.7 | 494 | 263 | 9 | 246 | 726 | 112 | 593 | 3.4e-55 | 218.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64670.t1 | G7I6T9 | 92.3 | 927 | 71 | 0 | 2 | 928 | 36 | 962 | 0.0e+00 | 1547.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene64670 | 0.802513 | 5.41E-49 | -1.69E-46 |
MS.gene049159 | MS.gene64670 | 0.8067 | 7.24E-50 | -1.69E-46 |
MS.gene049254 | MS.gene64670 | 0.846 | 2.86E-59 | -1.69E-46 |
MS.gene049343 | MS.gene64670 | 0.817713 | 2.86E-52 | -1.69E-46 |
MS.gene049404 | MS.gene64670 | 0.818109 | 2.33E-52 | -1.69E-46 |
MS.gene049435 | MS.gene64670 | 0.801108 | 1.05E-48 | -1.69E-46 |
MS.gene049501 | MS.gene64670 | 0.82654 | 2.57E-54 | -1.69E-46 |
MS.gene049567 | MS.gene64670 | 0.803744 | 3.01E-49 | -1.69E-46 |
MS.gene049711 | MS.gene64670 | 0.806819 | 6.84E-50 | -1.69E-46 |
MS.gene049824 | MS.gene64670 | 0.819472 | 1.14E-52 | -1.69E-46 |
MS.gene049825 | MS.gene64670 | 0.826247 | 3.01E-54 | -1.69E-46 |
MS.gene049850 | MS.gene64670 | 0.812766 | 3.59E-51 | -1.69E-46 |
MS.gene049873 | MS.gene64670 | 0.816808 | 4.57E-52 | -1.69E-46 |
MS.gene050026 | MS.gene64670 | 0.823593 | 1.27E-53 | -1.69E-46 |
MS.gene050156 | MS.gene64670 | 0.802026 | 6.82E-49 | -1.69E-46 |
MS.gene050303 | MS.gene64670 | 0.80689 | 6.60E-50 | -1.69E-46 |
MS.gene050355 | MS.gene64670 | 0.829351 | 5.40E-55 | -1.69E-46 |
MS.gene050442 | MS.gene64670 | 0.821281 | 4.39E-53 | -1.69E-46 |
MS.gene050559 | MS.gene64670 | 0.8249 | 6.28E-54 | -1.69E-46 |
MS.gene050561 | MS.gene64670 | 0.822535 | 2.25E-53 | -1.69E-46 |
MS.gene050562 | MS.gene64670 | 0.819441 | 1.16E-52 | -1.69E-46 |
MS.gene050719 | MS.gene64670 | 0.837027 | 6.62E-57 | -1.69E-46 |
MS.gene050721 | MS.gene64670 | 0.834302 | 3.24E-56 | -1.69E-46 |
MS.gene050724 | MS.gene64670 | 0.815983 | 6.99E-52 | -1.69E-46 |
MS.gene050759 | MS.gene64670 | 0.802331 | 5.90E-49 | -1.69E-46 |
MS.gene050780 | MS.gene64670 | 0.808152 | 3.56E-50 | -1.69E-46 |
MS.gene050844 | MS.gene64670 | 0.818407 | 1.99E-52 | -1.69E-46 |
MS.gene051198 | MS.gene64670 | 0.833169 | 6.22E-56 | -1.69E-46 |
MS.gene051210 | MS.gene64670 | 0.801442 | 8.99E-49 | -1.69E-46 |
MS.gene051247 | MS.gene64670 | 0.812409 | 4.30E-51 | -1.69E-46 |
MS.gene051700 | MS.gene64670 | 0.80629 | 8.84E-50 | -1.69E-46 |
MS.gene051744 | MS.gene64670 | 0.876857 | 1.00E-68 | -1.69E-46 |
MS.gene052020 | MS.gene64670 | 0.807602 | 4.66E-50 | -1.69E-46 |
MS.gene052208 | MS.gene64670 | 0.804539 | 2.06E-49 | -1.69E-46 |
MS.gene052384 | MS.gene64670 | 0.830007 | 3.74E-55 | -1.69E-46 |
MS.gene052519 | MS.gene64670 | 0.825386 | 4.82E-54 | -1.69E-46 |
MS.gene052582 | MS.gene64670 | 0.84077 | 7.12E-58 | -1.69E-46 |
MS.gene052584 | MS.gene64670 | 0.857349 | 1.73E-62 | -1.69E-46 |
MS.gene052586 | MS.gene64670 | 0.810012 | 1.42E-50 | -1.69E-46 |
MS.gene052896 | MS.gene64670 | 0.804748 | 1.86E-49 | -1.69E-46 |
MS.gene053226 | MS.gene64670 | 0.868046 | 8.73E-66 | -1.69E-46 |
MS.gene053995 | MS.gene64670 | 0.816829 | 4.52E-52 | -1.69E-46 |
MS.gene054468 | MS.gene64670 | 0.801309 | 9.57E-49 | -1.69E-46 |
MS.gene054576 | MS.gene64670 | 0.82735 | 1.64E-54 | -1.69E-46 |
MS.gene054651 | MS.gene64670 | 0.846022 | 2.82E-59 | -1.69E-46 |
MS.gene054657 | MS.gene64670 | 0.804878 | 1.75E-49 | -1.69E-46 |
MS.gene054775 | MS.gene64670 | 0.826232 | 3.04E-54 | -1.69E-46 |
MS.gene055166 | MS.gene64670 | 0.84809 | 7.65E-60 | -1.69E-46 |
MS.gene055512 | MS.gene64670 | 0.823417 | 1.40E-53 | -1.69E-46 |
MS.gene055513 | MS.gene64670 | 0.800766 | 1.24E-48 | -1.69E-46 |
MS.gene055586 | MS.gene64670 | 0.831028 | 2.10E-55 | -1.69E-46 |
MS.gene055589 | MS.gene64670 | 0.820261 | 7.53E-53 | -1.69E-46 |
MS.gene055778 | MS.gene64670 | 0.846962 | 1.56E-59 | -1.69E-46 |
MS.gene055818 | MS.gene64670 | 0.815406 | 9.40E-52 | -1.69E-46 |
MS.gene05604 | MS.gene64670 | 0.812639 | 3.83E-51 | -1.69E-46 |
MS.gene056050 | MS.gene64670 | 0.841271 | 5.26E-58 | -1.69E-46 |
MS.gene056091 | MS.gene64670 | 0.807872 | 4.09E-50 | -1.69E-46 |
MS.gene056162 | MS.gene64670 | 0.80163 | 8.23E-49 | -1.69E-46 |
MS.gene056174 | MS.gene64670 | 0.806612 | 7.56E-50 | -1.69E-46 |
MS.gene056366 | MS.gene64670 | 0.808103 | 3.65E-50 | -1.69E-46 |
MS.gene056403 | MS.gene64670 | 0.816278 | 6.01E-52 | -1.69E-46 |
MS.gene056506 | MS.gene64670 | 0.838732 | 2.41E-57 | -1.69E-46 |
MS.gene05659 | MS.gene64670 | 0.811979 | 5.34E-51 | -1.69E-46 |
MS.gene056605 | MS.gene64670 | 0.809064 | 2.28E-50 | -1.69E-46 |
MS.gene05686 | MS.gene64670 | 0.831628 | 1.50E-55 | -1.69E-46 |
MS.gene056986 | MS.gene64670 | 0.800798 | 1.22E-48 | -1.69E-46 |
MS.gene057026 | MS.gene64670 | 0.830091 | 3.57E-55 | -1.69E-46 |
MS.gene057027 | MS.gene64670 | 0.80147 | 8.87E-49 | -1.69E-46 |
MS.gene057034 | MS.gene64670 | 0.801346 | 9.40E-49 | -1.69E-46 |
MS.gene057314 | MS.gene64670 | 0.861473 | 1.00E-63 | -1.69E-46 |
MS.gene057360 | MS.gene64670 | 0.806138 | 9.51E-50 | -1.69E-46 |
MS.gene057444 | MS.gene64670 | 0.805562 | 1.26E-49 | -1.69E-46 |
MS.gene057869 | MS.gene64670 | 0.805515 | 1.29E-49 | -1.69E-46 |
MS.gene057915 | MS.gene64670 | 0.845955 | 2.94E-59 | -1.69E-46 |
MS.gene058010 | MS.gene64670 | 0.809107 | 2.23E-50 | -1.69E-46 |
MS.gene058037 | MS.gene64670 | 0.842221 | 2.95E-58 | -1.69E-46 |
MS.gene058625 | MS.gene64670 | 0.833562 | 4.97E-56 | -1.69E-46 |
MS.gene058829 | MS.gene64670 | 0.838493 | 2.78E-57 | -1.69E-46 |
MS.gene058979 | MS.gene64670 | 0.834645 | 2.66E-56 | -1.69E-46 |
MS.gene059272 | MS.gene64670 | 0.809615 | 1.73E-50 | -1.69E-46 |
MS.gene05954 | MS.gene64670 | 0.825015 | 5.90E-54 | -1.69E-46 |
MS.gene059625 | MS.gene64670 | 0.836036 | 1.18E-56 | -1.69E-46 |
MS.gene059725 | MS.gene64670 | 0.805637 | 1.21E-49 | -1.69E-46 |
MS.gene05979 | MS.gene64670 | 0.800064 | 1.72E-48 | -1.69E-46 |
MS.gene059842 | MS.gene64670 | 0.806346 | 8.60E-50 | -1.69E-46 |
MS.gene059935 | MS.gene64670 | 0.827811 | 1.27E-54 | -1.69E-46 |
MS.gene060101 | MS.gene64670 | 0.807553 | 4.78E-50 | -1.69E-46 |
MS.gene060429 | MS.gene64670 | 0.803221 | 3.87E-49 | -1.69E-46 |
MS.gene060521 | MS.gene64670 | 0.82443 | 8.11E-54 | -1.69E-46 |
MS.gene060572 | MS.gene64670 | 0.817077 | 3.97E-52 | -1.69E-46 |
MS.gene060637 | MS.gene64670 | 0.8196 | 1.07E-52 | -1.69E-46 |
MS.gene060690 | MS.gene64670 | 0.80622 | 9.15E-50 | -1.69E-46 |
MS.gene060935 | MS.gene64670 | 0.807802 | 4.23E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64670.t1 | MTR_1g080390 | 95.469 | 927 | 42 | 0 | 2 | 928 | 36 | 962 | 0.0 | 1813 |
MS.gene64670.t1 | MTR_4g118630 | 40.000 | 75 | 45 | 0 | 250 | 324 | 50 | 124 | 1.13e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64670.t1 | AT2G21440 | 47.700 | 1000 | 419 | 20 | 2 | 928 | 35 | 1003 | 0.0 | 783 |
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCTTCCTTTGGTTCTTT+TGG | 0.103039 | 5.2:-67932627 | None:intergenic |
TCTGTTTCCTTGGAAGTTTC+AGG | 0.151548 | 5.2:-67936902 | None:intergenic |
TGCTTCTGGGATGGGTATTT+TGG | 0.157301 | 5.2:+67937204 | MS.gene64670:CDS |
CGTTACGAAGTTTCAGTTTC+TGG | 0.161347 | 5.2:-67938382 | None:intergenic |
CCTTGTTCGCTATTTGAATT+TGG | 0.165477 | 5.2:-67938551 | None:intergenic |
TTAACAGTTTCCTTGGATTT+TGG | 0.171316 | 5.2:-67936824 | None:intergenic |
ACTGAATCTTTGTTCTTCTT+TGG | 0.190926 | 5.2:-67938869 | None:intergenic |
GGGGTTCTCTTTCTGTCTTT+TGG | 0.201997 | 5.2:-67938615 | None:intergenic |
AAGAAAGAAGACGCGATATT+TGG | 0.226860 | 5.2:+67938791 | MS.gene64670:CDS |
TCAACTGCCAATACTGCTTC+TGG | 0.228699 | 5.2:+67937190 | MS.gene64670:CDS |
GGTAAAGGGTAGACCATTAA+AGG | 0.229384 | 5.2:+67937225 | MS.gene64670:CDS |
GTTGCTAGAACTGTTATATT+TGG | 0.244405 | 5.2:+67933045 | MS.gene64670:CDS |
AGAGCCTTTAAAACCTTTAA+TGG | 0.253378 | 5.2:-67937238 | None:intergenic |
TTTCATCTGCGGGGCCTGTA+TGG | 0.269359 | 5.2:+67934669 | MS.gene64670:CDS |
GATAAAGACAGCGGATTATC+TGG | 0.273260 | 5.2:+67932582 | MS.gene64670:CDS |
AGGCCAAAGAAAATGAAATA+AGG | 0.273524 | 5.2:+67934639 | MS.gene64670:intron |
AAACTCAATGGATCGAAGTT+TGG | 0.305477 | 5.2:+67934975 | MS.gene64670:CDS |
TCCACAATGGGCCGATGTTC+AGG | 0.311484 | 5.2:-67938341 | None:intergenic |
CACTTCGGAATTTGTACTCT+TGG | 0.314322 | 5.2:-67938636 | None:intergenic |
ACTTCGGAATTTGTACTCTT+GGG | 0.316199 | 5.2:-67938635 | None:intergenic |
TCTACGCAACATCGTGGTTT+TGG | 0.321066 | 5.2:+67931249 | MS.gene64670:CDS |
TAACCAACCTGCCGAATTAC+AGG | 0.332513 | 5.2:-67937862 | None:intergenic |
CAATCACAACCTTCTTCCTT+TGG | 0.333819 | 5.2:-67932636 | None:intergenic |
TGTCAGAAACCTTCCTTTCA+AGG | 0.342388 | 5.2:+67934534 | MS.gene64670:CDS |
CAAATCATCTTCTGTTTCCT+TGG | 0.348953 | 5.2:-67936912 | None:intergenic |
ATTATTTACAGATTCATCTT+TGG | 0.350195 | 5.2:-67936771 | None:intergenic |
GTCGTCTCATAGCTGTTGAT+TGG | 0.358840 | 5.2:+67935000 | MS.gene64670:CDS |
AACTCAATGGATCGAAGTTT+GGG | 0.358983 | 5.2:+67934976 | MS.gene64670:CDS |
TTGCCCGCCGAAGACACTTT+TGG | 0.361409 | 5.2:-67938677 | None:intergenic |
ATAGTTCCATTGAAAGTAAT+AGG | 0.371133 | 5.2:+67938756 | MS.gene64670:CDS |
TTGTTTCATGGTTACTCAAA+AGG | 0.372314 | 5.2:+67931136 | MS.gene64670:CDS |
AAGCAGGGGAAAAGGTTTCT+AGG | 0.374787 | 5.2:+67938840 | MS.gene64670:CDS |
TGCACCCTTAACAGTTTCCT+TGG | 0.378021 | 5.2:-67936831 | None:intergenic |
CTATTAAGCATCCCCTTTCA+AGG | 0.383007 | 5.2:+67933136 | MS.gene64670:CDS |
CACCATGACTCTGGCCATCT+TGG | 0.383423 | 5.2:-67938712 | None:intergenic |
GCTGAAACCCCTTCGGCAGC+TGG | 0.384100 | 5.2:-67937459 | None:intergenic |
AGAACCCTTGTGTGAGAACT+TGG | 0.390972 | 5.2:-67938942 | None:intergenic |
CTCTGAAGCAGGAGCATCAT+TGG | 0.391724 | 5.2:-67935054 | None:intergenic |
AAAATCCAAGGAAACTGTTA+AGG | 0.392787 | 5.2:+67936826 | MS.gene64670:CDS |
AGCGTAAACTCCTGCATTGT+CGG | 0.396945 | 5.2:-67938468 | None:intergenic |
CACCGCCAAGCCAGAGAAAT+CGG | 0.405483 | 5.2:+67933102 | MS.gene64670:CDS |
AAATCGTTGCTTCACTTCTT+CGG | 0.405889 | 5.2:-67936978 | None:intergenic |
ATCTAATTCAAAGGGAAGAT+TGG | 0.406524 | 5.2:-67936954 | None:intergenic |
ACCATGAAACAACGTCTAAC+AGG | 0.407399 | 5.2:-67931125 | None:intergenic |
ACCTGTTAGACGTTGTTTCA+TGG | 0.408406 | 5.2:+67931124 | MS.gene64670:CDS |
GAACAAACTTTCAGTGAAGT+TGG | 0.409004 | 5.2:+67931101 | MS.gene64670:CDS |
AAAGGCTCTGGACAGGAAAT+CGG | 0.409354 | 5.2:+67937252 | MS.gene64670:CDS |
AAGCTTCCATTTCTGAGTCT+TGG | 0.414414 | 5.2:-67934509 | None:intergenic |
AGACCACCGCAATCTTTACT+TGG | 0.416144 | 5.2:+67937315 | MS.gene64670:CDS |
CCAAGCAAACACCTGTAATT+CGG | 0.424020 | 5.2:+67937851 | MS.gene64670:CDS |
TTCATCTGCGGGGCCTGTAT+GGG | 0.425013 | 5.2:+67934670 | MS.gene64670:CDS |
GGCCAAAGAAAATGAAATAA+GGG | 0.433746 | 5.2:+67934640 | MS.gene64670:intron |
TTGGTCACTTGGTGGAGAAC+AGG | 0.437156 | 5.2:-67937031 | None:intergenic |
TCCTGTGTGCAGTCTTTCGA+AGG | 0.439780 | 5.2:+67934815 | MS.gene64670:intron |
CGAACCGTTCTTCAGCTCAA+TGG | 0.446543 | 5.2:-67932306 | None:intergenic |
ACACACAGTGCCGATTTCTC+TGG | 0.447857 | 5.2:-67933112 | None:intergenic |
TGCCGATTTCTCTGGCTTGG+CGG | 0.449281 | 5.2:-67933104 | None:intergenic |
CAACTGCCAATACTGCTTCT+GGG | 0.451408 | 5.2:+67937191 | MS.gene64670:CDS |
AATCTAAACAGCTTAGGAAA+TGG | 0.456031 | 5.2:+67938990 | MS.gene64670:CDS |
CTAGGACATACTTGGTCACT+TGG | 0.461965 | 5.2:-67937042 | None:intergenic |
CAGAAGATCATTCCTTGAAA+GGG | 0.462491 | 5.2:-67933148 | None:intergenic |
GCCAATACTGCTTCTGGGAT+GGG | 0.465705 | 5.2:+67937196 | MS.gene64670:CDS |
GCGTAAACTCCTGCATTGTC+GGG | 0.469405 | 5.2:-67938467 | None:intergenic |
TTGTCTTGTGAATTCTGCTA+TGG | 0.470061 | 5.2:+67933068 | MS.gene64670:CDS |
CCAAGAACAAGCAGGGGAAA+AGG | 0.470314 | 5.2:+67938832 | MS.gene64670:CDS |
ACCCATCCCAGAAGCAGTAT+TGG | 0.471074 | 5.2:-67937197 | None:intergenic |
CCGAATTACAGGTGTTTGCT+TGG | 0.472209 | 5.2:-67937851 | None:intergenic |
TTTGGGCACGCCAACTTGGT+GGG | 0.473129 | 5.2:+67933807 | MS.gene64670:CDS |
ACTGTTTGGGCACGCCAACT+TGG | 0.473827 | 5.2:+67933803 | MS.gene64670:CDS |
CGTTCTTCAGCTCAATGGCT+TGG | 0.475932 | 5.2:-67932301 | None:intergenic |
CAGGCGATTCGAAAACTCAA+TGG | 0.479592 | 5.2:+67934963 | MS.gene64670:intron |
AGAAAGTCCAAAAGTGTCTT+CGG | 0.480875 | 5.2:+67938670 | MS.gene64670:CDS |
TGCAGGCGTCCACGAGGGAC+TGG | 0.480915 | 5.2:+67937124 | MS.gene64670:intron |
AGAGTTCTTAACAATAATCC+TGG | 0.483615 | 5.2:+67938092 | MS.gene64670:CDS |
TGCCAATACTGCTTCTGGGA+TGG | 0.486395 | 5.2:+67937195 | MS.gene64670:CDS |
TGTTTCATGGTTACTCAAAA+GGG | 0.486741 | 5.2:+67931137 | MS.gene64670:CDS |
GTTTGGGCACGCCAACTTGG+TGG | 0.487001 | 5.2:+67933806 | MS.gene64670:CDS |
CAGTGCCGATTTCTCTGGCT+TGG | 0.490360 | 5.2:-67933107 | None:intergenic |
AGCATCAATCAACCTTGATC+CGG | 0.491692 | 5.2:-67932401 | None:intergenic |
GATTTCTTTAGGACAACAAA+AGG | 0.498067 | 5.2:+67936565 | MS.gene64670:intron |
CAAGGTGGTAAAGTGCCAAA+TGG | 0.499530 | 5.2:+67938569 | MS.gene64670:CDS |
TCGTCTCATAGCTGTTGATT+GGG | 0.499678 | 5.2:+67935001 | MS.gene64670:CDS |
AAGAACAGCCTTCTTGCAGC+AGG | 0.499780 | 5.2:-67933694 | None:intergenic |
TTCTCACACAAGGGTTCTCA+AGG | 0.501028 | 5.2:+67938947 | MS.gene64670:CDS |
TAGGAGGGACTTATTCTTGA+CGG | 0.501393 | 5.2:+67937432 | MS.gene64670:intron |
AGGGAGCCAAGACTCAGAAA+TGG | 0.503890 | 5.2:+67934503 | MS.gene64670:intron |
GAAAGTAATAGGAAAATCTC+AGG | 0.503966 | 5.2:+67938767 | MS.gene64670:CDS |
GTAATTTAGCACCATGACTC+TGG | 0.504247 | 5.2:-67938721 | None:intergenic |
AGAAATATCTGAAACCTTGT+CGG | 0.504739 | 5.2:-67936876 | None:intergenic |
TACAGATTCATCTTTGGCAG+AGG | 0.505508 | 5.2:-67936765 | None:intergenic |
GGGAAAAGGTTTCTAGGAAA+AGG | 0.509364 | 5.2:+67938846 | MS.gene64670:CDS |
TGAAAATCGAAGATCAAAAC+CGG | 0.510715 | 5.2:+67932382 | MS.gene64670:CDS |
ATGCAAAACCAAGAACAAGC+AGG | 0.511718 | 5.2:+67938824 | MS.gene64670:CDS |
TCTTCGGTATCTAATTCAAA+GGG | 0.513395 | 5.2:-67936962 | None:intergenic |
CTTCGGAATTTGTACTCTTG+GGG | 0.515980 | 5.2:-67938634 | None:intergenic |
GCAGAAGATCATTCCTTGAA+AGG | 0.517219 | 5.2:-67933149 | None:intergenic |
TCAAGAGCAAACTCCACAAT+GGG | 0.517340 | 5.2:-67938353 | None:intergenic |
TCAACAGATCGAACCTTGAA+AGG | 0.517773 | 5.2:-67934547 | None:intergenic |
ACGGTTCGTTGGTTGGTGAC+CGG | 0.518037 | 5.2:+67932321 | MS.gene64670:CDS |
GGAATGAATACCTCCCATAC+AGG | 0.518282 | 5.2:-67934683 | None:intergenic |
CGAAGATCAAAACCGGATCA+AGG | 0.520422 | 5.2:+67932389 | MS.gene64670:CDS |
ACTGACAAAGAATCTGATCA+AGG | 0.522199 | 5.2:+67936635 | MS.gene64670:CDS |
ATCAGTGGCTGAAACCCCTT+CGG | 0.522666 | 5.2:-67937466 | None:intergenic |
TTCTTCGGTATCTAATTCAA+AGG | 0.523243 | 5.2:-67936963 | None:intergenic |
GACGGAACTCCAGCTGCCGA+AGG | 0.523716 | 5.2:+67937450 | MS.gene64670:CDS |
CAATGATGCTCCTGCTTCAG+AGG | 0.523848 | 5.2:+67935055 | MS.gene64670:CDS |
CAGATCGAACCTTGAAAGGA+AGG | 0.524767 | 5.2:-67934543 | None:intergenic |
GAAATATTTATAGTTTGGAA+AGG | 0.525585 | 5.2:+67937695 | MS.gene64670:intron |
TTGTAATGACGCAGCAGATG+AGG | 0.526196 | 5.2:+67932808 | MS.gene64670:CDS |
GAACAAAGATTCAGTAGGGA+AGG | 0.527716 | 5.2:+67938877 | MS.gene64670:CDS |
AAATCCAAGGAAACTGTTAA+GGG | 0.531440 | 5.2:+67936827 | MS.gene64670:CDS |
CCAAAAGAACCAAAGGAAGA+AGG | 0.533227 | 5.2:+67932627 | MS.gene64670:CDS |
AAGACGCGATATTTGGAAAG+AGG | 0.533754 | 5.2:+67938798 | MS.gene64670:CDS |
AAGAAGAACAAAGATTCAGT+AGG | 0.534680 | 5.2:+67938872 | MS.gene64670:CDS |
AAATTACCTTCCTCTGAAGC+AGG | 0.535871 | 5.2:-67935065 | None:intergenic |
TGCATTATCAGCTGCTTCCG+CGG | 0.535875 | 5.2:-67937164 | None:intergenic |
TGTAATGACGCAGCAGATGA+GGG | 0.537350 | 5.2:+67932809 | MS.gene64670:CDS |
TTCCCAGGCCTGCTGCAAGA+AGG | 0.537740 | 5.2:+67933686 | MS.gene64670:intron |
AATGATAAACCCGACAATGC+AGG | 0.540063 | 5.2:+67938458 | MS.gene64670:CDS |
TTCTTTCGATGATATCACTT+CGG | 0.542100 | 5.2:-67938651 | None:intergenic |
TTCTAAGCCTGAAACTTCCA+AGG | 0.542108 | 5.2:+67936895 | MS.gene64670:CDS |
AAGGGTTCTCAAGGAAATGA+TGG | 0.544012 | 5.2:+67938956 | MS.gene64670:CDS |
CCTGTGTGCAGTCTTTCGAA+GGG | 0.545229 | 5.2:+67934816 | MS.gene64670:intron |
GACACAATAGAGGGCAATGA+AGG | 0.546836 | 5.2:+67932534 | MS.gene64670:intron |
GATGCTCCTGCTTCAGAGGA+AGG | 0.546927 | 5.2:+67935059 | MS.gene64670:CDS |
GGACATACTTGGTCACTTGG+TGG | 0.548184 | 5.2:-67937039 | None:intergenic |
TGCAAAACCAAGAACAAGCA+GGG | 0.550150 | 5.2:+67938825 | MS.gene64670:CDS |
CTGAAGAACGGTTCGTTGGT+TGG | 0.551214 | 5.2:+67932314 | MS.gene64670:CDS |
AAAGAACAAGCCAAAATCCA+AGG | 0.552898 | 5.2:+67936814 | MS.gene64670:CDS |
ACGGAACTCCAGCTGCCGAA+GGG | 0.553197 | 5.2:+67937451 | MS.gene64670:CDS |
TCATTGACCACAGAAACCTT+CGG | 0.555563 | 5.2:+67938317 | MS.gene64670:intron |
TTGGGCACGCCAACTTGGTG+GGG | 0.556141 | 5.2:+67933808 | MS.gene64670:CDS |
GCAAACACCTGTAATTCGGC+AGG | 0.559184 | 5.2:+67937855 | MS.gene64670:CDS |
GGCACGCCAACTTGGTGGGG+AGG | 0.559247 | 5.2:+67933811 | MS.gene64670:CDS |
TTCAGTTCCAAAAGAACCAA+AGG | 0.560178 | 5.2:+67932620 | MS.gene64670:CDS |
ATTCAAGAAAAGCGACTCCA+CGG | 0.563574 | 5.2:-67938037 | None:intergenic |
AGTCCAAAAGTGTCTTCGGC+GGG | 0.563911 | 5.2:+67938674 | MS.gene64670:CDS |
ACTTTACCTCCCCACCAAGT+TGG | 0.564510 | 5.2:-67933817 | None:intergenic |
AGAAGAACAAAGATTCAGTA+GGG | 0.570029 | 5.2:+67938873 | MS.gene64670:CDS |
GAAAGATGGCAGGAAAGGAA+AGG | 0.571880 | 5.2:+67937992 | MS.gene64670:CDS |
ATCTGCGGGGCCTGTATGGG+AGG | 0.572499 | 5.2:+67934673 | MS.gene64670:CDS |
CAGGAAATCGGCTCATGACA+AGG | 0.573330 | 5.2:+67937264 | MS.gene64670:CDS |
TCCTGAACATCGGCCCATTG+TGG | 0.574904 | 5.2:+67938340 | MS.gene64670:CDS |
GGGCCGATGTTCAGGACCGA+AGG | 0.576328 | 5.2:-67938333 | None:intergenic |
TGAGCTGAAGAACGGTTCGT+TGG | 0.581661 | 5.2:+67932310 | MS.gene64670:CDS |
CATGGTGCTAAATTACATGA+AGG | 0.582212 | 5.2:+67938728 | MS.gene64670:CDS |
CCAAATTCAAATAGCGAACA+AGG | 0.584745 | 5.2:+67938551 | MS.gene64670:CDS |
CTGACAAAGAATCTGATCAA+GGG | 0.585118 | 5.2:+67936636 | MS.gene64670:CDS |
TAAGAACTCTCAACGCAACA+AGG | 0.587382 | 5.2:-67938079 | None:intergenic |
CCGCAATCTTTACTTGGCGA+AGG | 0.588434 | 5.2:+67937321 | MS.gene64670:CDS |
CGGAACTCCAGCTGCCGAAG+GGG | 0.589924 | 5.2:+67937452 | MS.gene64670:CDS |
AAAGCTACAGTATCAGCAGC+GGG | 0.590881 | 5.2:+67938406 | MS.gene64670:CDS |
AATGCAGGAGTTTACGCTCA+TGG | 0.594723 | 5.2:+67938473 | MS.gene64670:CDS |
TGACAAACCAGCAAAAGACT+TGG | 0.595099 | 5.2:+67938526 | MS.gene64670:CDS |
TTCAAGAAAAGCGACTCCAC+GGG | 0.595349 | 5.2:-67938036 | None:intergenic |
AACCAAGATGGCCAGAGTCA+TGG | 0.597159 | 5.2:+67938710 | MS.gene64670:CDS |
AGGAATGATCTTCTGCAGCA+TGG | 0.605435 | 5.2:+67933156 | MS.gene64670:CDS |
TACCCTGTGTCGGACTTCTG+TGG | 0.606080 | 5.2:-67934704 | None:intergenic |
TAATGACGCAGCAGATGAGG+GGG | 0.606529 | 5.2:+67932811 | MS.gene64670:CDS |
ATTCCACAGAAGTCCGACAC+AGG | 0.608649 | 5.2:+67934701 | MS.gene64670:CDS |
ATCAAGAGCAAACTCCACAA+TGG | 0.611104 | 5.2:-67938354 | None:intergenic |
TTTCTGTTGTTGCCGTTGTG+AGG | 0.616515 | 5.2:-67938431 | None:intergenic |
AAGGAATATATACCCTGTGT+CGG | 0.616888 | 5.2:-67934714 | None:intergenic |
TGACAAAGAATCTGATCAAG+GGG | 0.619765 | 5.2:+67936637 | MS.gene64670:CDS |
TAGATCCAAGTTCTCACACA+AGG | 0.623451 | 5.2:+67938937 | MS.gene64670:CDS |
GTAATGACGCAGCAGATGAG+GGG | 0.624059 | 5.2:+67932810 | MS.gene64670:CDS |
CAAGCCATTGAGCTGAAGAA+CGG | 0.627871 | 5.2:+67932302 | MS.gene64670:CDS |
CCAAATGGAAAATCTCCTCA+AGG | 0.629918 | 5.2:+67938584 | MS.gene64670:CDS |
AAGTCCAAAAGTGTCTTCGG+CGG | 0.636059 | 5.2:+67938673 | MS.gene64670:CDS |
AAGCTGAAAAGTAACCAAGA+TGG | 0.637677 | 5.2:+67938698 | MS.gene64670:CDS |
AGAAGATCATTCCTTGAAAG+GGG | 0.638195 | 5.2:-67933147 | None:intergenic |
AAACCTTCGGTCCTGAACAT+CGG | 0.642171 | 5.2:+67938330 | MS.gene64670:CDS |
CAGCAGCGGGCTCCTCACAA+CGG | 0.643240 | 5.2:+67938419 | MS.gene64670:CDS |
CAAGAACAGCAGTATTCCCG+TGG | 0.650331 | 5.2:+67938020 | MS.gene64670:CDS |
AGATAGTAGTACTACTACTG+AGG | 0.650531 | 5.2:+67936598 | MS.gene64670:CDS |
GCAAAACCAAGAACAAGCAG+GGG | 0.651326 | 5.2:+67938826 | MS.gene64670:CDS |
TAGTGATATTGATAGTGTTG+TGG | 0.658825 | 5.2:+67936664 | MS.gene64670:CDS |
CTCAATGCAGGCGTCCACGA+GGG | 0.661595 | 5.2:+67937119 | MS.gene64670:intron |
TGATATTGATAGTGTTGTGG+AGG | 0.663472 | 5.2:+67936667 | MS.gene64670:CDS |
TTCCACAGAAGTCCGACACA+GGG | 0.667711 | 5.2:+67934702 | MS.gene64670:CDS |
TTAAGAAAACCAGTCCCTCG+TGG | 0.669577 | 5.2:-67937133 | None:intergenic |
TCAGGGTCTACGCAACATCG+TGG | 0.673144 | 5.2:+67931243 | MS.gene64670:intron |
AACATCTAAAGAGTCCGACA+AGG | 0.679032 | 5.2:+67936862 | MS.gene64670:CDS |
ACTCAATGCAGGCGTCCACG+AGG | 0.680693 | 5.2:+67937118 | MS.gene64670:intron |
AAAAGCTACAGTATCAGCAG+CGG | 0.686433 | 5.2:+67938405 | MS.gene64670:CDS |
AAGAACTCTCAACGCAACAA+GGG | 0.697627 | 5.2:-67938078 | None:intergenic |
AGATCCAAGTTCTCACACAA+GGG | 0.701976 | 5.2:+67938938 | MS.gene64670:CDS |
TCGCCAAGTAAAGATTGCGG+TGG | 0.704028 | 5.2:-67937318 | None:intergenic |
AGATTCAGTAGGGAAGGACA+TGG | 0.712089 | 5.2:+67938883 | MS.gene64670:CDS |
AATGGAAAATCTCCTCAAGG+AGG | 0.725686 | 5.2:+67938587 | MS.gene64670:CDS |
CCTTCGCCAAGTAAAGATTG+CGG | 0.731180 | 5.2:-67937321 | None:intergenic |
AATGACGCAGCAGATGAGGG+GGG | 0.732596 | 5.2:+67932812 | MS.gene64670:CDS |
AATTCAAATAGCGAACAAGG+TGG | 0.748003 | 5.2:+67938554 | MS.gene64670:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 67930680 | 67939024 | 67930680 | ID=MS.gene64670 |
chr5.2 | mRNA | 67930680 | 67939024 | 67930680 | ID=MS.gene64670.t1;Parent=MS.gene64670 |
chr5.2 | exon | 67930680 | 67930685 | 67930680 | ID=MS.gene64670.t1.exon1;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67930680 | 67930685 | 67930680 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67931098 | 67931158 | 67931098 | ID=MS.gene64670.t1.exon2;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67931098 | 67931158 | 67931098 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67931247 | 67931283 | 67931247 | ID=MS.gene64670.t1.exon3;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67931247 | 67931283 | 67931247 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67932280 | 67932410 | 67932280 | ID=MS.gene64670.t1.exon4;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67932280 | 67932410 | 67932280 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67932544 | 67932648 | 67932544 | ID=MS.gene64670.t1.exon5;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67932544 | 67932648 | 67932544 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67932744 | 67932852 | 67932744 | ID=MS.gene64670.t1.exon6;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67932744 | 67932852 | 67932744 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67933044 | 67933177 | 67933044 | ID=MS.gene64670.t1.exon7;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67933044 | 67933177 | 67933044 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67933693 | 67933832 | 67933693 | ID=MS.gene64670.t1.exon8;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67933693 | 67933832 | 67933693 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67934505 | 67934555 | 67934505 | ID=MS.gene64670.t1.exon9;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67934505 | 67934555 | 67934505 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67934641 | 67934723 | 67934641 | ID=MS.gene64670.t1.exon10;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67934641 | 67934723 | 67934641 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67934827 | 67934881 | 67934827 | ID=MS.gene64670.t1.exon11;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67934827 | 67934881 | 67934827 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67934966 | 67935080 | 67934966 | ID=MS.gene64670.t1.exon12;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67934966 | 67935080 | 67934966 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67936576 | 67937053 | 67936576 | ID=MS.gene64670.t1.exon13;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67936576 | 67937053 | 67936576 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67937129 | 67937342 | 67937129 | ID=MS.gene64670.t1.exon14;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67937129 | 67937342 | 67937129 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67937435 | 67937505 | 67937435 | ID=MS.gene64670.t1.exon15;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67937435 | 67937505 | 67937435 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67937708 | 67937876 | 67937708 | ID=MS.gene64670.t1.exon16;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67937708 | 67937876 | 67937708 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67937981 | 67938113 | 67937981 | ID=MS.gene64670.t1.exon17;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67937981 | 67938113 | 67937981 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
chr5.2 | exon | 67938330 | 67939024 | 67938330 | ID=MS.gene64670.t1.exon18;Parent=MS.gene64670.t1 |
chr5.2 | CDS | 67938330 | 67939024 | 67938330 | ID=cds.MS.gene64670.t1;Parent=MS.gene64670.t1 |
Gene Sequence |
Protein sequence |