AlfalfaGEDB | MS.gene065652

M. sativa cultivar XinJiangDaYe / MS.gene065652

KEGG: K14838
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065652.t1	XP_003592542.1	97.7	213	5	0	1	213	1	213	3.30E-114	421

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065652.t1	O74978	47.1	155	82	0	40	194	92	246	3.4e-35	149.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065652.t1	G7IAS2	97.7	213	5	0	1	213	1	213	2.4e-114	421.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049824	MS.gene065652	0.845879	3.08E-59	-1.69E-46
MS.gene049825	MS.gene065652	0.867269	1.55E-65	-1.69E-46
MS.gene049873	MS.gene065652	0.862652	4.35E-64	-1.69E-46
MS.gene050303	MS.gene065652	0.808081	3.69E-50	-1.69E-46
MS.gene051700	MS.gene065652	0.817615	3.01E-52	-1.69E-46
MS.gene05188	MS.gene065652	0.811317	7.44E-51	-1.69E-46
MS.gene053226	MS.gene065652	0.816042	6.78E-52	-1.69E-46
MS.gene053294	MS.gene065652	0.802546	5.33E-49	-1.69E-46
MS.gene055555	MS.gene065652	0.808136	3.59E-50	-1.69E-46
MS.gene055808	MS.gene065652	0.836179	1.09E-56	-1.69E-46
MS.gene056091	MS.gene065652	0.841607	4.29E-58	-1.69E-46
MS.gene056403	MS.gene065652	0.838788	2.34E-57	-1.69E-46
MS.gene056605	MS.gene065652	0.81336	2.66E-51	-1.69E-46
MS.gene058911	MS.gene065652	0.801404	9.15E-49	-1.69E-46
MS.gene05954	MS.gene065652	0.819714	1.00E-52	-1.69E-46
MS.gene059935	MS.gene065652	0.8289	6.95E-55	-1.69E-46
MS.gene06001	MS.gene065652	0.826297	2.93E-54	-1.69E-46
MS.gene060429	MS.gene065652	0.815022	1.14E-51	-1.69E-46
MS.gene060586	MS.gene065652	0.810681	1.02E-50	-1.69E-46
MS.gene060763	MS.gene065652	0.817062	4.01E-52	-1.69E-46
MS.gene060830	MS.gene065652	0.839089	1.95E-57	-1.69E-46
MS.gene06094	MS.gene065652	0.809376	1.95E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene065652	MS.gene81068	PPI
MS.gene050985	MS.gene065652	PPI
MS.gene065652	MS.gene46475	PPI
MS.gene065652	MS.gene43350	PPI
MS.gene004704	MS.gene065652	PPI
MS.gene065652	MS.gene073150	PPI
MS.gene32092	MS.gene065652	PPI
MS.gene51111	MS.gene065652	PPI
MS.gene065652	MS.gene08488	PPI
MS.gene81498	MS.gene065652	PPI
MS.gene065652	MS.gene002204	PPI
MS.gene065652	MS.gene99599	PPI
MS.gene065652	MS.gene061835	PPI
MS.gene065652	MS.gene039132	PPI
MS.gene017623	MS.gene065652	PPI
MS.gene065652	MS.gene81001	PPI
MS.gene063385	MS.gene065652	PPI
MS.gene044537	MS.gene065652	PPI
MS.gene065652	MS.gene41329	PPI
MS.gene065652	MS.gene059878	PPI
MS.gene065652	MS.gene044819	PPI
MS.gene70551	MS.gene065652	PPI
MS.gene065652	MS.gene045580	PPI
MS.gene065652	MS.gene060638	PPI
MS.gene061905	MS.gene065652	PPI
MS.gene065652	MS.gene77667	PPI
MS.gene065652	MS.gene041557	PPI
MS.gene065652	MS.gene053790	PPI
MS.gene065652	MS.gene64512	PPI
MS.gene065652	MS.gene80570	PPI
MS.gene065652	MS.gene91244	PPI
MS.gene065652	MS.gene002038	PPI
MS.gene065652	MS.gene30325	PPI
MS.gene065652	MS.gene071916	PPI
MS.gene065652	MS.gene90945	PPI
MS.gene065652	MS.gene07808	PPI
MS.gene006154	MS.gene065652	PPI
MS.gene065652	MS.gene44231	PPI
MS.gene047421	MS.gene065652	PPI
MS.gene065652	MS.gene028002	PPI
MS.gene065652	MS.gene69611	PPI
MS.gene065652	MS.gene057738	PPI
MS.gene065652	MS.gene020215	PPI
MS.gene065652	MS.gene060923	PPI
MS.gene065652	MS.gene20153	PPI
MS.gene065652	MS.gene98461	PPI
MS.gene065652	MS.gene031378	PPI
MS.gene032998	MS.gene065652	PPI
MS.gene047734	MS.gene065652	PPI
MS.gene065652	MS.gene66352	PPI
MS.gene065652	MS.gene038784	PPI
MS.gene065652	MS.gene77514	PPI
MS.gene98889	MS.gene065652	PPI
MS.gene065652	MS.gene035331	PPI
MS.gene039474	MS.gene065652	PPI
MS.gene069038	MS.gene065652	PPI
MS.gene037902	MS.gene065652	PPI
MS.gene07810	MS.gene065652	PPI
MS.gene065652	MS.gene55890	PPI
MS.gene065652	MS.gene60693	PPI
MS.gene065652	MS.gene059880	PPI
MS.gene86675	MS.gene065652	PPI
MS.gene065652	MS.gene88918	PPI
MS.gene065652	MS.gene99779	PPI
MS.gene95644	MS.gene065652	PPI
MS.gene065652	MS.gene072064	PPI
MS.gene065652	MS.gene034607	PPI
MS.gene065652	MS.gene88081	PPI
MS.gene065652	MS.gene40020	PPI
MS.gene065652	MS.gene29719	PPI
MS.gene065652	MS.gene23276	PPI
MS.gene54912	MS.gene065652	PPI
MS.gene065652	MS.gene031692	PPI
MS.gene065652	MS.gene94183	PPI
MS.gene065652	MS.gene011230	PPI
MS.gene065652	MS.gene064028	PPI
MS.gene051451	MS.gene065652	PPI
MS.gene09845	MS.gene065652	PPI
MS.gene065652	MS.gene006618	PPI
MS.gene065652	MS.gene75054	PPI
MS.gene018599	MS.gene065652	PPI
MS.gene065652	MS.gene75690	PPI
MS.gene065652	MS.gene047206	PPI
MS.gene065652	MS.gene057307	PPI
MS.gene065652	MS.gene029415	PPI
MS.gene018553	MS.gene065652	PPI
MS.gene065652	MS.gene036487	PPI
MS.gene065652	MS.gene59319	PPI
MS.gene065652	MS.gene012126	PPI
MS.gene065652	MS.gene90360	PPI
MS.gene065652	MS.gene73825	PPI
MS.gene065652	MS.gene95472	PPI
MS.gene065652	MS.gene32091	PPI
MS.gene065652	MS.gene040601	PPI
MS.gene065652	MS.gene75537	PPI
MS.gene065652	MS.gene003735	PPI
MS.gene065652	MS.gene39294	PPI
MS.gene065652	MS.gene000625	PPI
MS.gene004705	MS.gene065652	PPI
MS.gene065652	MS.gene95471	PPI
MS.gene065652	MS.gene065146	PPI
MS.gene065652	MS.gene47347	PPI
MS.gene45646	MS.gene065652	PPI
MS.gene065652	MS.gene010453	PPI
MS.gene065652	MS.gene01172	PPI
MS.gene065652	MS.gene59228	PPI
MS.gene065652	MS.gene00612	PPI
MS.gene065652	MS.gene37379	PPI
MS.gene065652	MS.gene77392	PPI
MS.gene065652	MS.gene045818	PPI
MS.gene065652	MS.gene79877	PPI
MS.gene065652	MS.gene045377	PPI
MS.gene89671	MS.gene065652	PPI
MS.gene065652	MS.gene030304	PPI
MS.gene065652	MS.gene25010	PPI
MS.gene065652	MS.gene001917	PPI
MS.gene065652	MS.gene000480	PPI
MS.gene065652	MS.gene003492	PPI
MS.gene065652	MS.gene067072	PPI
MS.gene065652	MS.gene40019	PPI
MS.gene065652	MS.gene80786	PPI
MS.gene065652	MS.gene40564	PPI
MS.gene065652	MS.gene022752	PPI
MS.gene065652	MS.gene94588	PPI
MS.gene53720	MS.gene065652	PPI
MS.gene065652	MS.gene059726	PPI
MS.gene049030	MS.gene065652	PPI
MS.gene065652	MS.gene52105	PPI
MS.gene065652	MS.gene003490	PPI
MS.gene065652	MS.gene045180	PPI
MS.gene065652	MS.gene064459	PPI
MS.gene065652	MS.gene034931	PPI
MS.gene065652	MS.gene68238	PPI
MS.gene065652	MS.gene39195	PPI
MS.gene06169	MS.gene065652	PPI
MS.gene07704	MS.gene065652	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065652.t1	MTR_1g108290	97.653	213	5	0	1	213	1	213	7.79e-155	427
MS.gene065652.t1	MTR_4g127330	86.885	183	18	3	1	181	1	179	1.02e-111	317

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065652.t1	AT5G04600	62.887	194	68	2	21	213	30	220	3.06e-91	267

Find 36 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCGGAAAATCAAGACATTT+TGG	0.167780	1.4:-83164499	MS.gene065652:CDS
TAATTAGTAACTTACATTCT+AGG	0.218865	1.4:+83164268	None:intergenic
TCTTCGAACTTTATCTTCTT+TGG	0.223112	1.4:+83162866	None:intergenic
GAGAATTTCCAGAAACAAAA+AGG	0.266924	1.4:-83165015	MS.gene065652:intron
CATGTCGCTCTCGTTCAATT+TGG	0.309167	1.4:+83163211	None:intergenic
GGAAATTCTCAATCTCTTGA+TGG	0.321409	1.4:+83165028	None:intergenic
TTCTCCAATGGTTTAAGTTC+AGG	0.362939	1.4:+83165251	None:intergenic
TAGCCGTTGGAAGGCGGTCC+TGG	0.397743	1.4:-83165284	MS.gene065652:CDS
ATCCGACCAATATACAAAAC+AGG	0.406291	1.4:+83165221	None:intergenic
TGAAGAAGAAGAGTTTGAAA+AGG	0.462994	1.4:-83165439	MS.gene065652:CDS
TTATCTTCTTTGGAGCAGAC+TGG	0.474297	1.4:+83162876	None:intergenic
ACTTCCTGAACTTAAACCAT+TGG	0.494074	1.4:-83165255	MS.gene065652:CDS
TTCAATTTGGATAGTGTCCA+AGG	0.507498	1.4:+83163224	None:intergenic
CAAATAATTGTGCATAGTAT+CGG	0.509713	1.4:+83164342	None:intergenic
GAAGAAGAAGAGTTTGAAAA+GGG	0.512040	1.4:-83165438	MS.gene065652:CDS
CAATTACCGCTACAAGCCCT+TGG	0.527491	1.4:-83163241	MS.gene065652:CDS
AAATCAGCAGCATGCTCAGA+TGG	0.536864	1.4:+83165395	None:intergenic
AGTTCAGGAAGTTTGCGACC+AGG	0.549597	1.4:+83165266	None:intergenic
ATTATTTCAGGAAAGAACAT+TGG	0.557020	1.4:-83163099	MS.gene065652:intron
CGACCAGGACCGCCTTCCAA+CGG	0.564287	1.4:+83165281	None:intergenic
CTAGGATGAACATGTTCTGA+AGG	0.579983	1.4:+83164286	None:intergenic
TCCACATGGCTTCTATGAGA+AGG	0.596594	1.4:-83165198	MS.gene065652:CDS
ACAGGGGAAGAATTCTCCAA+TGG	0.598445	1.4:+83165239	None:intergenic
TATATTGGTCGGATTCCACA+TGG	0.600538	1.4:-83165212	MS.gene065652:CDS
TCAATTTGGATAGTGTCCAA+GGG	0.607262	1.4:+83163225	None:intergenic
TGGCTTCTATGAGAAGGAGA+TGG	0.607853	1.4:-83165192	MS.gene065652:CDS
TTGGTGTAGCCGTTGGAAGG+CGG	0.623788	1.4:-83165290	MS.gene065652:intron
TCTTCTTTGGAGCAGACTGG+AGG	0.628446	1.4:+83162879	None:intergenic
TGAACGAGAGCGACATGACA+AGG	0.631947	1.4:-83163205	MS.gene065652:intron
TCCGACCAATATACAAAACA+GGG	0.634212	1.4:+83165222	None:intergenic
TGATACCAAAATGGGGACGA+AGG	0.634975	1.4:-83165474	None:intergenic
TTCTATGAGAAGGAGATGGA+AGG	0.635681	1.4:-83165188	MS.gene065652:intron
CATAGAATTTGAATCTCCCG+AGG	0.652311	1.4:-83164473	MS.gene065652:intron
TCCTTCTCATAGAAGCCATG+TGG	0.660737	1.4:+83165197	None:intergenic
TAGTGTCCAAGGGCTTGTAG+CGG	0.693975	1.4:+83163235	None:intergenic
CCGACCAATATACAAAACAG+GGG	0.732963	1.4:+83165223	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATTAATTAAAATTAAA+AGG	+	chr1.4:83163501-83163520	None:intergenic	0.0%
!!	AAATACAAATAGTGTTATAT+TGG	+	chr1.4:83164683-83164702	None:intergenic	15.0%
!!	ATCAAGAAGAATAAATTAAA+AGG	-	chr1.4:83165032-83165051	MS.gene065652:CDS	15.0%
!!	CTATCAATATTAATCAAAAA+AGG	+	chr1.4:83163781-83163800	None:intergenic	15.0%
!!!	CTAATTATTGTTATTATTTC+AGG	-	chr1.4:83165215-83165234	MS.gene065652:CDS	15.0%
!!!	TCAATTTTTTTTGTTGTTAA+TGG	-	chr1.4:83162987-83163006	MS.gene065652:intron	15.0%
!!!	TTTAATTTTTTTGGAACTAA+TGG	-	chr1.4:83164957-83164976	MS.gene065652:intron	15.0%
!!	AAGAAGAATAAATTAAAAGG+TGG	-	chr1.4:83165035-83165054	MS.gene065652:CDS	20.0%
!!	AGAAGAATAAATTAAAAGGT+GGG	-	chr1.4:83165036-83165055	MS.gene065652:CDS	20.0%
!!	ATATCAGATTAACATGATTA+TGG	-	chr1.4:83164299-83164318	MS.gene065652:CDS	20.0%
!!	TAAACAAATTATTTAACCTC+AGG	+	chr1.4:83164999-83165018	None:intergenic	20.0%
!!	TAATTAGTAACTTACATTCT+AGG	+	chr1.4:83164061-83164080	None:intergenic	20.0%
!!!	ACATCTTATATTTTAACACA+AGG	+	chr1.4:83164590-83164609	None:intergenic	20.0%
!!!	AGAAAACAAGAAATTTTAAG+AGG	-	chr1.4:83164197-83164216	MS.gene065652:intron	20.0%
!!!	ATAAGCCTCTAATTTATTTT+GGG	+	chr1.4:83164424-83164443	None:intergenic	20.0%
!!!	ATGTTAATCTGATATTTTGA+GGG	+	chr1.4:83164294-83164313	None:intergenic	20.0%
!!!	ATTTTTTGGTTTTGTTTTGT+AGG	-	chr1.4:83163946-83163965	MS.gene065652:intron	20.0%
!!!	GTTTTTTTTTTCTCTTATGT+TGG	-	chr1.4:83164156-83164175	MS.gene065652:intron	20.0%
!!!	TCCATATGTATTTTTGTTTA+AGG	-	chr1.4:83164097-83164116	MS.gene065652:intron	20.0%
!!!	TTTTTTAATGTTTAACAGAC+CGG	-	chr1.4:83163809-83163828	MS.gene065652:intron	20.0%
!	AGAGATCAAAATAAACATGA+TGG	+	chr1.4:83164399-83164418	None:intergenic	25.0%
!	ATTATTTCAGGAAAGAACAT+TGG	-	chr1.4:83165227-83165246	MS.gene065652:CDS	25.0%
!	CAAATAATTGTGCATAGTAT+CGG	+	chr1.4:83163987-83164006	None:intergenic	25.0%
!	CATCAAAATTATAGTTCTCA+TGG	+	chr1.4:83163437-83163456	None:intergenic	25.0%
!	GCAATATATATCAATGAAGA+TGG	+	chr1.4:83163757-83163776	None:intergenic	25.0%
!	GCCTTAAACAAAAATACATA+TGG	+	chr1.4:83164101-83164120	None:intergenic	25.0%
!	TATATATCAATGAAGATGGA+AGG	+	chr1.4:83163753-83163772	None:intergenic	25.0%
!	TGAAATCATGAAGGAAAATA+GGG	-	chr1.4:83164640-83164659	MS.gene065652:intron	25.0%
!	TGACATAATTAAACAGTTTC+AGG	+	chr1.4:83164785-83164804	None:intergenic	25.0%
!	TTGAAATCATGAAGGAAAAT+AGG	-	chr1.4:83164639-83164658	MS.gene065652:intron	25.0%
!!	AGAAAAACAAATTTTACCTC+GGG	+	chr1.4:83163872-83163891	None:intergenic	25.0%
!!	ATTTTTCTTTGTAGATGGAA+AGG	-	chr1.4:83165059-83165078	MS.gene065652:intron	25.0%
!!	CAGAAAAACAAATTTTACCT+CGG	+	chr1.4:83163873-83163892	None:intergenic	25.0%
!!	CATAAGCCTCTAATTTATTT+TGG	+	chr1.4:83164425-83164444	None:intergenic	25.0%
!!	CATGTTAATCTGATATTTTG+AGG	+	chr1.4:83164295-83164314	None:intergenic	25.0%
!!	GGAATTCTATCCTTTTTATT+TGG	-	chr1.4:83163628-83163647	MS.gene065652:intron	25.0%
!!	TCATTTGTATTTTGTTAGTC+TGG	-	chr1.4:83165168-83165187	MS.gene065652:intron	25.0%
!!	TCCTTTTATCTCTAAACAAA+CGG	+	chr1.4:83164739-83164758	None:intergenic	25.0%
!!	TTTTCAAATGACTGATATGT+TGG	+	chr1.4:83164911-83164930	None:intergenic	25.0%
!!!	ATATTCTAGAATCATAGGAA+AGG	-	chr1.4:83164243-83164262	MS.gene065652:intron	25.0%
!!!	CTTATATTTTAACACAAGGT+TGG	+	chr1.4:83164586-83164605	None:intergenic	25.0%
!!!	GATTATTTGTTGCTTGATTT+TGG	-	chr1.4:83163017-83163036	MS.gene065652:CDS	25.0%
!!!	TAAGCCTCTAATTTATTTTG+GGG	+	chr1.4:83164423-83164442	None:intergenic	25.0%
!!!	TGTGTTGTGATTTTGATTTT+TGG	-	chr1.4:83163898-83163917	MS.gene065652:intron	25.0%
!!!	TTCTATCCTTTTTATTTGGT+TGG	-	chr1.4:83163632-83163651	MS.gene065652:intron	25.0%
!!!	TTGTTTGTGCTGATATTTTT+TGG	-	chr1.4:83163932-83163951	MS.gene065652:intron	25.0%
!!!	TTTGTTTTTGCAGCTTATTT+TGG	-	chr1.4:83163264-83163283	MS.gene065652:intron	25.0%
	AAATTATTTAACCTCAGGCA+TGG	+	chr1.4:83164994-83165013	None:intergenic	30.0%
	ACAACTAATCAGTCAAAGAA+AGG	+	chr1.4:83165365-83165384	None:intergenic	30.0%
	ACCGTTTGTTTAGAGATAAA+AGG	-	chr1.4:83164735-83164754	MS.gene065652:intron	30.0%
	AGTTTCCCTAACTACTATTT+GGG	+	chr1.4:83164468-83164487	None:intergenic	30.0%
	ATAGAATTCCTGATACACAA+AGG	+	chr1.4:83163618-83163637	None:intergenic	30.0%
	ATTTCTTTAAGTGCTTCAAC+TGG	+	chr1.4:83164823-83164842	None:intergenic	30.0%
	CAAGAACCAACCAAATAAAA+AGG	+	chr1.4:83163641-83163660	None:intergenic	30.0%
	CACTTAAAGAAATCAGAAGT+CGG	-	chr1.4:83164830-83164849	MS.gene065652:intron	30.0%
	CATGAGAAAAGATCAAGAAA+TGG	+	chr1.4:83165397-83165416	None:intergenic	30.0%
	GAAGAAGAAGAGTTTGAAAA+GGG	-	chr1.4:83162888-83162907	MS.gene065652:CDS	30.0%
	GAGAATTTCCAGAAACAAAA+AGG	-	chr1.4:83163311-83163330	MS.gene065652:intron	30.0%
	GATTAACATGATTATGGCTA+TGG	-	chr1.4:83164305-83164324	MS.gene065652:CDS	30.0%
	GTACATCATTATATAGCCTT+AGG	+	chr1.4:83164867-83164886	None:intergenic	30.0%
	TAGTTTCCCTAACTACTATT+TGG	+	chr1.4:83164469-83164488	None:intergenic	30.0%
	TCTTCCCCAAAATAAATTAG+AGG	-	chr1.4:83164416-83164435	MS.gene065652:intron	30.0%
	TCTTCGAACTTTATCTTCTT+TGG	+	chr1.4:83165463-83165482	None:intergenic	30.0%
	TGAAGAAGAAGAGTTTGAAA+AGG	-	chr1.4:83162887-83162906	MS.gene065652:CDS	30.0%
!	CAGTTTGTTTGAAATCATGA+AGG	-	chr1.4:83164631-83164650	MS.gene065652:intron	30.0%
!!	AATCTGATATTTTGAGGGAT+AGG	+	chr1.4:83164289-83164308	None:intergenic	30.0%
	AAAGCGACGTAAAAAGATAG+AGG	-	chr1.4:83165293-83165312	MS.gene065652:intron	35.0%
	AAGATGTAAGCTGACATATC+TGG	-	chr1.4:83164603-83164622	MS.gene065652:intron	35.0%
	ACCATACCCAAATAGTAGTT+AGG	-	chr1.4:83164459-83164478	MS.gene065652:intron	35.0%
	ACTTCCTGAACTTAAACCAT+TGG	-	chr1.4:83163071-83163090	MS.gene065652:CDS	35.0%
	AGAGGCTTATGAAATAGATG+AGG	-	chr1.4:83164434-83164453	MS.gene065652:intron	35.0%
	ATCCGACCAATATACAAAAC+AGG	+	chr1.4:83163108-83163127	None:intergenic	35.0%
	CAAAAAAAGCTCACAATCTC+GGG	+	chr1.4:83165342-83165361	None:intergenic	35.0%
	CCATACCCAAATAGTAGTTA+GGG	-	chr1.4:83164460-83164479	MS.gene065652:intron	35.0%
	GATGATACTGTCAAAGTTGT+AGG	-	chr1.4:83164339-83164358	MS.gene065652:CDS	35.0%
	GCAAAAAAAGCTCACAATCT+CGG	+	chr1.4:83165343-83165362	None:intergenic	35.0%
	GGAAATTCTCAATCTCTTGA+TGG	+	chr1.4:83163301-83163320	None:intergenic	35.0%
	TAAGAGGATCAACAATCCTT+GGG	-	chr1.4:83164213-83164232	MS.gene065652:intron	35.0%
	TACTAAAACAAGTAGCTCGA+AGG	+	chr1.4:83163693-83163712	None:intergenic	35.0%
	TCAATTTGGATAGTGTCCAA+GGG	+	chr1.4:83165104-83165123	None:intergenic	35.0%
	TCCGACCAATATACAAAACA+GGG	+	chr1.4:83163107-83163126	None:intergenic	35.0%
	TGTCAAAGTTGTAGGATTGT+GGG	-	chr1.4:83164347-83164366	MS.gene065652:CDS	35.0%
	TTAAGAGGATCAACAATCCT+TGG	-	chr1.4:83164212-83164231	MS.gene065652:intron	35.0%
	TTCAATTTGGATAGTGTCCA+AGG	+	chr1.4:83165105-83165124	None:intergenic	35.0%
!	ACCGGAAAATCAAGACATTT+TGG	-	chr1.4:83163827-83163846	MS.gene065652:intron	35.0%
!	ATGTGGGGTATTTGGTTAAA+AGG	+	chr1.4:83164531-83164550	None:intergenic	35.0%
!	ATTGGAAGAGCACAAAAAGT+TGG	-	chr1.4:83165245-83165264	MS.gene065652:CDS	35.0%
!	CATACAACGAAAAGAAGTGT+AGG	+	chr1.4:83163344-83163363	None:intergenic	35.0%
!	CCCAAAATGTCTTGATTTTC+CGG	+	chr1.4:83163831-83163850	None:intergenic	35.0%
!	CCGGAAAATCAAGACATTTT+GGG	-	chr1.4:83163828-83163847	MS.gene065652:intron	35.0%
!	GTGGGATTTTTCTTTGTAGA+TGG	-	chr1.4:83165054-83165073	MS.gene065652:intron	35.0%
!	TCTTCCCCTGTTTTGTATAT+TGG	-	chr1.4:83163099-83163118	MS.gene065652:intron	35.0%
!	TTCTCCAATGGTTTAAGTTC+AGG	+	chr1.4:83163078-83163097	None:intergenic	35.0%
!!	ATCAGAAGTCGGTTTTCTTA+AGG	-	chr1.4:83164841-83164860	MS.gene065652:intron	35.0%
!!	GAGCTTAACCTTTTTGTTTC+TGG	+	chr1.4:83163322-83163341	None:intergenic	35.0%
!!!	GCAGCTTATTTTGGACAATT+TGG	-	chr1.4:83163273-83163292	MS.gene065652:intron	35.0%
	AGGTAAAGCCTTTGTGTATC+AGG	-	chr1.4:83163607-83163626	MS.gene065652:intron	40.0%
	CATAGAATTTGAATCTCCCG+AGG	-	chr1.4:83163853-83163872	MS.gene065652:intron	40.0%
	CCCTAACTACTATTTGGGTA+TGG	+	chr1.4:83164463-83164482	None:intergenic	40.0%
	CCGACCAATATACAAAACAG+GGG	+	chr1.4:83163106-83163125	None:intergenic	40.0%
	CTAGGATGAACATGTTCTGA+AGG	+	chr1.4:83164043-83164062	None:intergenic	40.0%
	CTGTCAAAGTTGTAGGATTG+TGG	-	chr1.4:83164346-83164365	MS.gene065652:CDS	40.0%
	GTACCACAAAAACCTGTAGT+AGG	+	chr1.4:83164021-83164040	None:intergenic	40.0%
	GTCAAAGTTGTAGGATTGTG+GGG	-	chr1.4:83164348-83164367	MS.gene065652:CDS	40.0%
	TATACTAAATGCCATGCCTG+AGG	-	chr1.4:83164980-83164999	MS.gene065652:intron	40.0%
	TATATTGGTCGGATTCCACA+TGG	-	chr1.4:83163114-83163133	MS.gene065652:intron	40.0%
	TTCTATGAGAAGGAGATGGA+AGG	-	chr1.4:83163138-83163157	MS.gene065652:intron	40.0%
	TTTAAGTGCTTCAACTGGCT+AGG	+	chr1.4:83164818-83164837	None:intergenic	40.0%
!	ACAAGGTATCTAGTGTGATG+AGG	-	chr1.4:83165138-83165157	MS.gene065652:intron	40.0%
!	ACACCTACTACAGGTTTTTG+TGG	-	chr1.4:83164015-83164034	MS.gene065652:intron	40.0%
!	CCCCTGTTTTGTATATTGGT+CGG	-	chr1.4:83163103-83163122	MS.gene065652:intron	40.0%
!	CTATGTCTAATTGCTGTTGC+AGG	-	chr1.4:83165417-83165436	MS.gene065652:CDS	40.0%
!	GAAAGCATAACCAACCTAGA+AGG	+	chr1.4:83164374-83164393	None:intergenic	40.0%
!	GCTTTTTGAACACCTACTAC+AGG	-	chr1.4:83164006-83164025	MS.gene065652:intron	40.0%
!!	GGGGGATATTCTAGAATCAT+AGG	-	chr1.4:83164238-83164257	MS.gene065652:intron	40.0%
!!	TTATCTTCTTTGGAGCAGAC+TGG	+	chr1.4:83165453-83165472	None:intergenic	40.0%
!!!	TGAGCATGCTGCTGATTTTT+TGG	-	chr1.4:83162936-83162955	MS.gene065652:intron	40.0%
!!!	TTGCTCTTTTTCAGGCATGT+GGG	+	chr1.4:83164547-83164566	None:intergenic	40.0%
!!!	TTTGCTCTTTTTCAGGCATG+TGG	+	chr1.4:83164548-83164567	None:intergenic	40.0%
	AAATCAGCAGCATGCTCAGA+TGG	+	chr1.4:83162934-83162953	None:intergenic	45.0%
	ACACAAAGGCTTTACCTCTG+AGG	+	chr1.4:83163604-83163623	None:intergenic	45.0%
	ACAGGGGAAGAATTCTCCAA+TGG	+	chr1.4:83163090-83163109	None:intergenic	45.0%
	AGGATCAACAATCCTTGGGT+GGG	-	chr1.4:83164217-83164236	MS.gene065652:intron	45.0%
	CATATCGCGCAATGTTCAGA+AGG	-	chr1.4:83164490-83164509	MS.gene065652:CDS	45.0%
	CATGTCGCTCTCGTTCAATT+TGG	+	chr1.4:83165118-83165137	None:intergenic	45.0%
	CGTAAAAAGATAGAGGCTGC+TGG	-	chr1.4:83165300-83165319	MS.gene065652:intron	45.0%
	TCCACATGGCTTCTATGAGA+AGG	-	chr1.4:83163128-83163147	MS.gene065652:intron	45.0%
	TCCTTCTCATAGAAGCCATG+TGG	+	chr1.4:83163132-83163151	None:intergenic	45.0%
	TCTGAGGAAACAGGTGCTAA+AGG	+	chr1.4:83163588-83163607	None:intergenic	45.0%
	TGGCTTCTATGAGAAGGAGA+TGG	-	chr1.4:83163134-83163153	MS.gene065652:intron	45.0%
	TTGACAGTATCATCACGCTG+TGG	+	chr1.4:83164333-83164352	None:intergenic	45.0%
	TTTAGCACCTGTTTCCTCAG+AGG	-	chr1.4:83163587-83163606	MS.gene065652:intron	45.0%
!	CGAGAGCTTTGCTCTTTTTC+AGG	+	chr1.4:83164555-83164574	None:intergenic	45.0%
!	GTCTAATTGCTGTTGCAGGT+GGG	-	chr1.4:83165421-83165440	MS.gene065652:CDS	45.0%
!	TGTCTAATTGCTGTTGCAGG+TGG	-	chr1.4:83165420-83165439	MS.gene065652:CDS	45.0%
!	TTTCAGGCATGTGGGGTATT+TGG	+	chr1.4:83164539-83164558	None:intergenic	45.0%
!!	ATTTTGGTGTAGCCGTTGGA+AGG	-	chr1.4:83163033-83163052	MS.gene065652:CDS	45.0%
!!	CTTGATTTTGGTGTAGCCGT+TGG	-	chr1.4:83163029-83163048	MS.gene065652:CDS	45.0%
!!	GTCGGTTTTCTTAAGGCCTA+AGG	-	chr1.4:83164848-83164867	MS.gene065652:intron	45.0%
!!!	TGCTCTTTTTCAGGCATGTG+GGG	+	chr1.4:83164546-83164565	None:intergenic	45.0%
!!!	AGAATTATTTTTAATTTTTT+TGG	-	chr1.4:83164948-83164967	MS.gene065652:intron	5.0%
	AGTTCAGGAAGTTTGCGACC+AGG	+	chr1.4:83163063-83163082	None:intergenic	50.0%
	ATCAACAATCCTTGGGTGGG+GGG	-	chr1.4:83164220-83164239	MS.gene065652:intron	50.0%
	CAATTACCGCTACAAGCCCT+TGG	-	chr1.4:83165085-83165104	MS.gene065652:intron	50.0%
	GAGGATCAACAATCCTTGGG+TGG	-	chr1.4:83164216-83164235	MS.gene065652:intron	50.0%
	GATCAACAATCCTTGGGTGG+GGG	-	chr1.4:83164219-83164238	MS.gene065652:intron	50.0%
	GGATCAACAATCCTTGGGTG+GGG	-	chr1.4:83164218-83164237	MS.gene065652:intron	50.0%
	TAGTGTCCAAGGGCTTGTAG+CGG	+	chr1.4:83165094-83165113	None:intergenic	50.0%
	TGAACGAGAGCGACATGACA+AGG	-	chr1.4:83165121-83165140	MS.gene065652:intron	50.0%
!	AACAAGTAGCTCGAAGGCAC+AGG	+	chr1.4:83163687-83163706	None:intergenic	50.0%
!	GGCTTTACCTCTGAGGAAAC+AGG	+	chr1.4:83163597-83163616	None:intergenic	50.0%
!!	TCTTCTTTGGAGCAGACTGG+AGG	+	chr1.4:83165450-83165469	None:intergenic	50.0%
	CTAGAATATCCCCCCACCCA+AGG	+	chr1.4:83164232-83164251	None:intergenic	55.0%
	GATTGTGGGGCCTTCTAGGT+TGG	-	chr1.4:83164361-83164380	MS.gene065652:CDS	55.0%
	GTAGGATTGTGGGGCCTTCT+AGG	-	chr1.4:83164357-83164376	MS.gene065652:CDS	55.0%
	TTGGTGTAGCCGTTGGAAGG+CGG	-	chr1.4:83163036-83163055	MS.gene065652:CDS	55.0%
	CGACCAGGACCGCCTTCCAA+CGG	+	chr1.4:83163048-83163067	None:intergenic	65.0%
	TAGCCGTTGGAAGGCGGTCC+TGG	-	chr1.4:83163042-83163061	MS.gene065652:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	83162862	83165486	83162862	ID=MS.gene065652
chr1.4	mRNA	83162862	83165486	83162862	ID=MS.gene065652.t1;Parent=MS.gene065652
chr1.4	exon	83165391	83165486	83165391	ID=MS.gene065652.t1.exon1;Parent=MS.gene065652.t1
chr1.4	CDS	83165391	83165486	83165391	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83165189	83165303	83165189	ID=MS.gene065652.t1.exon2;Parent=MS.gene065652.t1
chr1.4	CDS	83165189	83165303	83165189	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83165016	83165071	83165016	ID=MS.gene065652.t1.exon3;Parent=MS.gene065652.t1
chr1.4	CDS	83165016	83165071	83165016	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83164474	83164521	83164474	ID=MS.gene065652.t1.exon4;Parent=MS.gene065652.t1
chr1.4	CDS	83164474	83164521	83164474	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83164283	83164380	83164283	ID=MS.gene065652.t1.exon5;Parent=MS.gene065652.t1
chr1.4	CDS	83164283	83164380	83164283	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83163206	83163275	83163206	ID=MS.gene065652.t1.exon6;Parent=MS.gene065652.t1
chr1.4	CDS	83163206	83163275	83163206	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83163001	83163111	83163001	ID=MS.gene065652.t1.exon7;Parent=MS.gene065652.t1
chr1.4	CDS	83163001	83163111	83163001	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1
chr1.4	exon	83162862	83162909	83162862	ID=MS.gene065652.t1.exon8;Parent=MS.gene065652.t1
chr1.4	CDS	83162862	83162909	83162862	ID=cds.MS.gene065652.t1;Parent=MS.gene065652.t1

Gene Sequence

>MS.gene065652

ATGGGGACGAAGGCAAAGAAAGCTATGAAGAAGAAGAGTTTGAAAAGGGTCAATGCTATTAACAATAAACCATCTGAGCATGCTGCTGATTTTTTGGTATGTTATTGTTCATAACACTTTTTCTCTCAATTTTTTTTGTTGTTAATGGTGTTTTTGATTATTTGTTGCTTGATTTTGGTGTAGCCGTTGGAAGGCGGTCCTGGTCGCAAACTTCCTGAACTTAAACCATTGGAGAATTCTTCCCCTGTTTTGTATATTGGTCGGATTCCACATGGCTTCTATGAGAAGGAGATGGAAGGTATTTTCTTATACTTTTAGATTATTTTTTTTTTTATCTTTATGTTTTCTTAATTTCTAGATTGTTATTTAATTTAACTTAGAGAATATGTGTTTATGAATTAATTTGTTTTTGCAGCTTATTTTGGACAATTTGGAACCATCAAGAGATTGAGAATTTCCAGAAACAAAAAGGTTAAGCTCCTACACTTCTTTTCGTTGTATGCTTAGACTTGTATCAACATGATGATGATGATTTATGACTTTGCTTTTACTATATTGAATTACTCTCTCATCCATGAGAACTATAATTTTGATGATAATTTTTCTAGAATGTTTCACTCTAATGTATATTTGTTACCTTTTAATTTTAATTAATATTTTTTATGCACATTGCAAATTCTTCAAATTTGTTGTTATGTAGTTCTCATGATACATAGTTCTTCGCCTTTAGCACCTGTTTCCTCAGAGGTAAAGCCTTTGTGTATCAGGAATTCTATCCTTTTTATTTGGTTGGTTCTTGACTGTTATCTTTGATTTTTGACACCTGTGCCTTCGAGCTACTTGTTTTAGTAGAATACTCGATTTCAACAATGTTTAGTTAGTTAACTACCTTCCATCTTCATTGATATATATTGCTCCTTTTTTGATTAATATTGATAGCACATTTTTTTTTTAATGTTTAACAGACCGGAAAATCAAGACATTTTGGGTTCATAGAATTTGAATCTCCCGAGGTAAAATTTGTTTTTCTGATTATTGTGTTGTGATTTTGATTTTTGGTGTATAAACTCTTGTTTGTGCTGATATTTTTTGGTTTTGTTTTGTAGGTAGCAAAAATTGTTGCCGATACTATGCACAATTATTTGCTTTTTGAACACCTACTACAGGTTTTTGTGGTACCTTCAGAACATGTTCATCCTAGAATGTAAGTTACTAATTAACTTGTTAATTCGTTATCCATATGTATTTTTGTTTAAGGCTTCGTAATTTGTTTGTTATATTCTCTTTTCTAGTTGTTTTTTTTTTCTCTTATGTTGGAAGAGAGAGTTTATTATGAGAAAACAAGAAATTTTAAGAGGATCAACAATCCTTGGGTGGGGGGATATTCTAGAATCATAGGAAAGGTAAATCAGCTCACAAACTTACCTATCCCTCAAAATATCAGATTAACATGATTATGGCTATGGTTCCACAGCGTGATGATACTGTCAAAGTTGTAGGATTGTGGGGCCTTCTAGGTTGGTTATGCTTTCATCCATCATGTTTATTTTGATCTCTTCCCCAAAATAAATTAGAGGCTTATGAAATAGATGAGGACACCATACCCAAATAGTAGTTAGGGAAACTATCATATCGCGCAATGTTCAGAAGGAAATGTCTAGCACTGCCTTTTAACCAAATACCCCACATGCCTGAAAAAGAGCAAAGCTCTCGAGCATTTTCCAACCTTGTGTTAAAATATAAGATGTAAGCTGACATATCTGGTAAGTCAGTTTGTTTGAAATCATGAAGGAAAATAGGGAAAGTGCAAGAGAAATTCCAATATAACACTATTTGTATTTGAATTAGCTGACTGAAAGCTGATACAGAAGCAACCGTTTGTTTAGAGATAAAAGGAACAGTGATTCGCTTTTGTGCACACCTGAAACTGTTTAATTATGTCAACGAAATAATCCTAGCCAGTTGAAGCACTTAAAGAAATCAGAAGTCGGTTTTCTTAAGGCCTAAGGCTATATAATGATGTACTGTACAGAAAACAATTATAAACCAACATATCAGTCATTTGAAAACAATAGAAGCATGTAGCAGAATTATTTTTAATTTTTTTGGAACTAATGGTATACTAAATGCCATGCCTGAGGTTAAATAATTTGTTTATTTTCTTAACATAATCAAGAAGAATAAATTAAAAGGTGGGATTTTTCTTTGTAGATGGAAAGGATTCAATTACCGCTACAAGCCCTTGGACACTATCCAAATTGAACGAGAGCGACATGACAAGGTATCTAGTGTGATGAGGAAGTATATCATTTGTATTTTGTTAGTCTGGTATTCTGTATAAAAAGAAAATGTACTAATTATTGTTATTATTTCAGGAAAGAACATTGGAAGAGCACAAAAAGTTGGTTGATAGAGTTATGAAACGTGACAAAAAGCGACGTAAAAAGATAGAGGCTGCTGGCATTGATTATGAGTGTCCCGAGATTGTGAGCTTTTTTTGCCTTTCTTTGACTGATTAGTTGTTTTGATAGTCCATTTCTTGATCTTTTCTCATGCTATGTCTAATTGCTGTTGCAGGTGGGTAACCTCCAGTCTGCTCCAAAGAAGATAAAGTTCGAAGACTGA

Protein sequence

>MS.gene065652.t1

MGTKAKKAMKKKSLKRVNAINNKPSEHAADFLPLEGGPGRKLPELKPLENSSPVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRISRNKKTGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVFVVPSEHVHPRIWKGFNYRYKPLDTIQIERERHDKERTLEEHKKLVDRVMKRDKKRRKKIEAAGIDYECPEIVGNLQSAPKKIKFED