AlfalfaGEDB | MS.gene029547

M. sativa cultivar XinJiangDaYe / MS.gene029547

KEGG: K14838
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene029547.t1	XP_003592542.1	96.7	213	7	0	1	213	1	213	2.80E-113	417.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene029547.t1	O74978	46.5	155	83	0	40	194	92	246	9.9e-35	148.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene029547.t1	G7IAS2	96.7	213	7	0	1	213	1	213	2.0e-113	417.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene029547	MS.gene81001	PPI
MS.gene029547	MS.gene66352	PPI
MS.gene029547	MS.gene038784	PPI
MS.gene029547	MS.gene77514	PPI
MS.gene047734	MS.gene029547	PPI
MS.gene79877	MS.gene029547	PPI
MS.gene029547	MS.gene035331	PPI
MS.gene069038	MS.gene029547	PPI
MS.gene029547	MS.gene60693	PPI
MS.gene68238	MS.gene029547	PPI
MS.gene45646	MS.gene029547	PPI
MS.gene029547	MS.gene77667	PPI
MS.gene029547	MS.gene88918	PPI
MS.gene029547	MS.gene99779	PPI
MS.gene029547	MS.gene91244	PPI
MS.gene029547	MS.gene072064	PPI
MS.gene029547	MS.gene034607	PPI
MS.gene95644	MS.gene029547	PPI
MS.gene029547	MS.gene40020	PPI
MS.gene029547	MS.gene29719	PPI
MS.gene029547	MS.gene23276	PPI
MS.gene029547	MS.gene031692	PPI
MS.gene039132	MS.gene029547	PPI
MS.gene029547	MS.gene011230	PPI
MS.gene029547	MS.gene064028	PPI
MS.gene029547	MS.gene006618	PPI
MS.gene040601	MS.gene029547	PPI
MS.gene045580	MS.gene029547	PPI
MS.gene029547	MS.gene75690	PPI
MS.gene029547	MS.gene047206	PPI
MS.gene029547	MS.gene057307	PPI
MS.gene029547	MS.gene029415	PPI
MS.gene018553	MS.gene029547	PPI
MS.gene029547	MS.gene012126	PPI
MS.gene59319	MS.gene029547	PPI
MS.gene031378	MS.gene029547	PPI
MS.gene029547	MS.gene73825	PPI
MS.gene029547	MS.gene95472	PPI
MS.gene029547	MS.gene32091	PPI
MS.gene029547	MS.gene003735	PPI
MS.gene029547	MS.gene39294	PPI
MS.gene029547	MS.gene95471	PPI
MS.gene029547	MS.gene065146	PPI
MS.gene004705	MS.gene029547	PPI
MS.gene029547	MS.gene47347	PPI
MS.gene049030	MS.gene029547	PPI
MS.gene029547	MS.gene010453	PPI
MS.gene029547	MS.gene01172	PPI
MS.gene029547	MS.gene59228	PPI
MS.gene029547	MS.gene00612	PPI
MS.gene06169	MS.gene029547	PPI
MS.gene41329	MS.gene029547	PPI
MS.gene07704	MS.gene029547	PPI
MS.gene029547	MS.gene045818	PPI
MS.gene050985	MS.gene029547	PPI
MS.gene029547	MS.gene045377	PPI
MS.gene004704	MS.gene029547	PPI
MS.gene029547	MS.gene030304	PPI
MS.gene32092	MS.gene029547	PPI
MS.gene89671	MS.gene029547	PPI
MS.gene029547	MS.gene75054	PPI
MS.gene81498	MS.gene029547	PPI
MS.gene029547	MS.gene001917	PPI
MS.gene029547	MS.gene000480	PPI
MS.gene07808	MS.gene029547	PPI
MS.gene029547	MS.gene003492	PPI
MS.gene029547	MS.gene94588	PPI
MS.gene029547	MS.gene067072	PPI
MS.gene017623	MS.gene029547	PPI
MS.gene029547	MS.gene40019	PPI
MS.gene029547	MS.gene80786	PPI
MS.gene029547	MS.gene90360	PPI
MS.gene063385	MS.gene029547	PPI
MS.gene044537	MS.gene029547	PPI
MS.gene029547	MS.gene75537	PPI
MS.gene029547	MS.gene000625	PPI
MS.gene70551	MS.gene029547	PPI
MS.gene029547	MS.gene40564	PPI
MS.gene55890	MS.gene029547	PPI
MS.gene029547	MS.gene022752	PPI
MS.gene029547	MS.gene059726	PPI
MS.gene029547	MS.gene003490	PPI
MS.gene061905	MS.gene029547	PPI
MS.gene53720	MS.gene029547	PPI
MS.gene045180	MS.gene029547	PPI
MS.gene029547	MS.gene064459	PPI
MS.gene029547	MS.gene034931	PPI
MS.gene029547	MS.gene39195	PPI
MS.gene029547	MS.gene37379	PPI
MS.gene029547	MS.gene77392	PPI
MS.gene029547	MS.gene81068	PPI
MS.gene006154	MS.gene029547	PPI
MS.gene029547	MS.gene46475	PPI
MS.gene047421	MS.gene029547	PPI
MS.gene029547	MS.gene073150	PPI
MS.gene029547	MS.gene08488	PPI
MS.gene029547	MS.gene25010	PPI
MS.gene029547	MS.gene002204	PPI
MS.gene029547	MS.gene99599	PPI
MS.gene51111	MS.gene029547	PPI
MS.gene032998	MS.gene029547	PPI
MS.gene80570	MS.gene029547	PPI
MS.gene98889	MS.gene029547	PPI
MS.gene059880	MS.gene029547	PPI
MS.gene94183	MS.gene029547	PPI
MS.gene039474	MS.gene029547	PPI
MS.gene029547	MS.gene059878	PPI
MS.gene029547	MS.gene044819	PPI
MS.gene88081	MS.gene029547	PPI
MS.gene037902	MS.gene029547	PPI
MS.gene07810	MS.gene029547	PPI
MS.gene029547	MS.gene060638	PPI
MS.gene029547	MS.gene52105	PPI
MS.gene86675	MS.gene029547	PPI
MS.gene029547	MS.gene041557	PPI
MS.gene029547	MS.gene053790	PPI
MS.gene029547	MS.gene64512	PPI
MS.gene029547	MS.gene002038	PPI
MS.gene029547	MS.gene30325	PPI
MS.gene029547	MS.gene071916	PPI
MS.gene061835	MS.gene029547	PPI
MS.gene54912	MS.gene029547	PPI
MS.gene029547	MS.gene90945	PPI
MS.gene029547	MS.gene44231	PPI
MS.gene029547	MS.gene028002	PPI
MS.gene029547	MS.gene69611	PPI
MS.gene051451	MS.gene029547	PPI
MS.gene029547	MS.gene057738	PPI
MS.gene029547	MS.gene020215	PPI
MS.gene09845	MS.gene029547	PPI
MS.gene029547	MS.gene060923	PPI
MS.gene029547	MS.gene43350	PPI
MS.gene029547	MS.gene20153	PPI
MS.gene036487	MS.gene029547	PPI
MS.gene018599	MS.gene029547	PPI
MS.gene029547	MS.gene98461	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene029547.t1	MTR_1g108290	96.714	213	7	0	1	213	1	213	1.76e-152	421
MS.gene029547.t1	MTR_4g127330	85.792	183	20	3	1	181	1	179	1.81e-109	311

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene029547.t1	AT5G04600	62.371	194	69	2	21	213	30	220	7.38e-90	263

Find 35 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCGGAAAATCAAGACATTT+TGG	0.167780	1.3:-73879877	MS.gene029547:CDS
TCTTCAAACTTTATCTTCTT+TGG	0.198223	1.3:+73878240	None:intergenic
TAATTAGTAACTTACATTCT+AGG	0.218865	1.3:+73879646	None:intergenic
GAGAATTTCCAGAAATAAAA+AGG	0.220241	1.3:-73880420	MS.gene029547:intron
TTTGTTTATGCAGCTTATTT+TGG	0.258280	1.3:-73880467	MS.gene029547:intron
GGAAATTCTCAATCTCTTGA+TGG	0.321409	1.3:+73880433	None:intergenic
TTCTCCAATGGTTTAAGTTC+AGG	0.362939	1.3:+73880653	None:intergenic
TGAAGAAGAAGAGTTTGAAA+AGG	0.405744	1.3:-73880839	MS.gene029547:CDS
ATCCGACCAATATACAAAAC+AGG	0.406291	1.3:+73880623	None:intergenic
GAAGAAGAAGAGTTTGAAAA+GGG	0.411573	1.3:-73880838	MS.gene029547:CDS
TAGCCGTTGGAAGGTGGTCC+TGG	0.447393	1.3:-73880686	MS.gene029547:CDS
TTATCTTCTTTGGAGCAGAC+TGG	0.474297	1.3:+73878250	None:intergenic
TTCAATTTCGAGAGTGTCCA+AGG	0.477137	1.3:+73878595	None:intergenic
ACTTCCTGAACTTAAACCAT+TGG	0.494074	1.3:-73880657	MS.gene029547:CDS
CAATTACCGCTACAAGCCCT+TGG	0.527491	1.3:-73878612	MS.gene029547:CDS
AAATCAGCAGCATGCTCAGA+TGG	0.536864	1.3:+73880795	None:intergenic
AGTTCAGGAAGTTTGCGACC+AGG	0.549597	1.3:+73880668	None:intergenic
ATTATTTCAGGAAAGAACAT+TGG	0.557020	1.3:-73878470	MS.gene029547:intron
CTAGGATGAACATGTTCTGA+AGG	0.579983	1.3:+73879664	None:intergenic
TCCACATGGCTTCTATGAGA+AGG	0.596594	1.3:-73880600	MS.gene029547:CDS
TTGGTGTAGCCGTTGGAAGG+TGG	0.596969	1.3:-73880692	MS.gene029547:intron
ACAGGGGAAGAATTCTCCAA+TGG	0.598445	1.3:+73880641	None:intergenic
CGACCAGGACCACCTTCCAA+CGG	0.599267	1.3:+73880683	None:intergenic
TATATTGGTCGGATTCCACA+TGG	0.600538	1.3:-73880614	MS.gene029547:CDS
TGGCTTCTATGAGAAGGAGA+TGG	0.607853	1.3:-73880594	MS.gene029547:CDS
TCTTCTTTGGAGCAGACTGG+AGG	0.628446	1.3:+73878253	None:intergenic
TGAACGAGAGCGACATGACA+AGG	0.631947	1.3:-73878576	MS.gene029547:intron
TCAATTTCGAGAGTGTCCAA+GGG	0.633895	1.3:+73878596	None:intergenic
TCCGACCAATATACAAAACA+GGG	0.634212	1.3:+73880624	None:intergenic
TGATACCAAAATGGGGACGA+AGG	0.634975	1.3:-73880874	None:intergenic
TTCTATGAGAAGGAGATGGA+AGG	0.635681	1.3:-73880590	MS.gene029547:intron
CATAGAATTTGAATCTCCCG+AGG	0.652311	1.3:-73879851	MS.gene029547:intron
TCCTTCTCATAGAAGCCATG+TGG	0.660737	1.3:+73880599	None:intergenic
GAGTGTCCAAGGGCTTGTAG+CGG	0.685180	1.3:+73878606	None:intergenic
CCGACCAATATACAAAACAG+GGG	0.732963	1.3:+73880625	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATACAAATAGTATTATAT+TGG	+	chr1.3:73880086-73880105	None:intergenic	10.0%
!!	ATCAAGAAGAATAAATTAAA+AGG	-	chr1.3:73880435-73880454	MS.gene029547:CDS	15.0%
!!	GTTATCAATATTAATCAAAA+AGG	+	chr1.3:73879164-73879183	None:intergenic	15.0%
!!!	CTAATTATTGTTATTATTTC+AGG	-	chr1.3:73880618-73880637	MS.gene029547:CDS	15.0%
!!!	TTTAATTTTTTTGGAACTAA+TGG	-	chr1.3:73880360-73880379	MS.gene029547:intron	15.0%
!!	AAATCATAAAGAAGGAAAAT+AGG	-	chr1.3:73880042-73880061	MS.gene029547:intron	20.0%
!!	AAGAAGAATAAATTAAAAGG+TGG	-	chr1.3:73880438-73880457	MS.gene029547:CDS	20.0%
!!	AATCATAAAGAAGGAAAATA+GGG	-	chr1.3:73880043-73880062	MS.gene029547:intron	20.0%
!!	AGAAGAATAAATTAAAAGGT+GGG	-	chr1.3:73880439-73880458	MS.gene029547:CDS	20.0%
!!	ATATCAGATTAACATGATTA+TGG	-	chr1.3:73879695-73879714	MS.gene029547:CDS	20.0%
!!	TAAACAAATTATTTAACCTC+AGG	+	chr1.3:73880402-73880421	None:intergenic	20.0%
!!	TAATTAGTAACTTACATTCT+AGG	+	chr1.3:73879457-73879476	None:intergenic	20.0%
!!!	AGAAAAATAAATTTTACCTC+GGG	+	chr1.3:73879268-73879287	None:intergenic	20.0%
!!!	AGAAAACAAGAAATTTTAAG+AGG	-	chr1.3:73879593-73879612	MS.gene029547:intron	20.0%
!!!	ATAAGCCTCTAATTTATTTT+GGG	+	chr1.3:73879825-73879844	None:intergenic	20.0%
!!!	ATGTTAATCTGATATTTTGA+TGG	+	chr1.3:73879690-73879709	None:intergenic	20.0%
!!!	CAGAAAAATAAATTTTACCT+CGG	+	chr1.3:73879269-73879288	None:intergenic	20.0%
!!!	TCCATATGTATTTTTGTTTA+AGG	-	chr1.3:73879493-73879512	MS.gene029547:intron	20.0%
!!!	TTTGTTTGAAATCATAAAGA+AGG	-	chr1.3:73880034-73880053	MS.gene029547:intron	20.0%
!!!	TTTTTTTATGTTTAACAGAC+CGG	-	chr1.3:73879205-73879224	MS.gene029547:intron	20.0%
!	AGAGATCAAAATAAACATGA+TGG	+	chr1.3:73879800-73879819	None:intergenic	25.0%
!	ATTATTTCAGGAAAGAACAT+TGG	-	chr1.3:73880630-73880649	MS.gene029547:CDS	25.0%
!	GAGAATTTCCAGAAATAAAA+AGG	-	chr1.3:73878680-73878699	MS.gene029547:intron	25.0%
!	GCCTTAAACAAAAATACATA+TGG	+	chr1.3:73879497-73879516	None:intergenic	25.0%
!	TATATATCAATGAAGATCGA+AGG	+	chr1.3:73879136-73879155	None:intergenic	25.0%
!	TCTTCAAACTTTATCTTCTT+TGG	+	chr1.3:73880863-73880882	None:intergenic	25.0%
!	TGTTTCAGTCTAATGTATAT+TGG	-	chr1.3:73878853-73878872	MS.gene029547:intron	25.0%
!!	AGTTTTCCTAACTACTATTT+GGG	+	chr1.3:73879868-73879887	None:intergenic	25.0%
!!	ATTTTTCTTTGTAGATGGAA+AGG	-	chr1.3:73880462-73880481	MS.gene029547:intron	25.0%
!!	CATAAGCCTCTAATTTATTT+TGG	+	chr1.3:73879826-73879845	None:intergenic	25.0%
!!	TAGTTTTCCTAACTACTATT+TGG	+	chr1.3:73879869-73879888	None:intergenic	25.0%
!!	TCATTTGTATTTTGTTAGTC+TGG	-	chr1.3:73880571-73880590	MS.gene029547:intron	25.0%
!!	TGCTTTTATCTCTAAACAAA+CGG	+	chr1.3:73880142-73880161	None:intergenic	25.0%
!!	TTTGTTTATGCAGCTTATTT+TGG	-	chr1.3:73878633-73878652	MS.gene029547:intron	25.0%
!!	TTTTCAAATGACTGATATGT+TGG	+	chr1.3:73880314-73880333	None:intergenic	25.0%
!!!	AATCTGATATTTTGATGGAT+AGG	+	chr1.3:73879685-73879704	None:intergenic	25.0%
!!!	ACATCTTACATTTTAACACA+AGG	+	chr1.3:73879990-73880009	None:intergenic	25.0%
!!!	ATTTTCTAGAATCATAGGAA+AGG	-	chr1.3:73879639-73879658	MS.gene029547:intron	25.0%
!!!	CATCGAAATTATAGTTCTAA+TGG	+	chr1.3:73878818-73878837	None:intergenic	25.0%
!!!	GATTATTTGTTGCTTGATTT+TGG	-	chr1.3:73878389-73878408	MS.gene029547:CDS	25.0%
!!!	GGAATTCTATCGTTTTTATT+TGG	-	chr1.3:73879010-73879029	MS.gene029547:intron	25.0%
!!!	GTTTTTTGGTTTTGTTTTGT+AGG	-	chr1.3:73879342-73879361	MS.gene029547:intron	25.0%
!!!	GTTTTTTTTTTCTCTTGTGT+TGG	-	chr1.3:73879552-73879571	MS.gene029547:intron	25.0%
!!!	TAAGCCTCTAATTTATTTTG+GGG	+	chr1.3:73879824-73879843	None:intergenic	25.0%
!!!	TCTCAATTTTTTGTTGTTGA+TGG	-	chr1.3:73878359-73878378	MS.gene029547:intron	25.0%
!!!	TGTGTTGTGATTTTGATTTT+TGG	-	chr1.3:73879294-73879313	MS.gene029547:intron	25.0%
!!!	TTCTATCGTTTTTATTTGGT+TGG	-	chr1.3:73879014-73879033	MS.gene029547:intron	25.0%
	AAAACGACGTAAAAAGATAG+AGG	-	chr1.3:73880696-73880715	MS.gene029547:intron	30.0%
	AAATTATTTAACCTCAGGCA+TGG	+	chr1.3:73880397-73880416	None:intergenic	30.0%
	ACAACTAATCAGTCAAAGAA+AGG	+	chr1.3:73880768-73880787	None:intergenic	30.0%
	ACCTAAAACAAGTAACTAGA+AGG	+	chr1.3:73879075-73879094	None:intergenic	30.0%
	ATAGAATTCCTGATACACAA+AGG	+	chr1.3:73879000-73879019	None:intergenic	30.0%
	ATTGGAAGAACACAAAAAGT+TGG	-	chr1.3:73880648-73880667	MS.gene029547:CDS	30.0%
	GAAGAAGAAGAGTTTGAAAA+GGG	-	chr1.3:73878262-73878281	MS.gene029547:CDS	30.0%
	GATTAACATGATTATGGCTA+TGG	-	chr1.3:73879701-73879720	MS.gene029547:CDS	30.0%
	GTACATCATTATATAGCCTT+AGG	+	chr1.3:73880270-73880289	None:intergenic	30.0%
	TCTTCCCCAAAATAAATTAG+AGG	-	chr1.3:73879817-73879836	MS.gene029547:intron	30.0%
	TGAAGAAGAAGAGTTTGAAA+AGG	-	chr1.3:73878261-73878280	MS.gene029547:CDS	30.0%
!	AACATGATGATGATGATTTG+TGG	-	chr1.3:73878754-73878773	MS.gene029547:intron	30.0%
!!	CTTACATTTTAACACAAGGT+AGG	+	chr1.3:73879986-73880005	None:intergenic	30.0%
!!	GAGCTTAACCTTTTTATTTC+TGG	+	chr1.3:73878691-73878710	None:intergenic	30.0%
!!!	TTGTTTGTGCTGATGTTTTT+TGG	-	chr1.3:73879328-73879347	MS.gene029547:intron	30.0%
	AAGATGTAAGCTGACATATC+TGG	-	chr1.3:73880003-73880022	MS.gene029547:intron	35.0%
	ACCATACCCAAATAGTAGTT+AGG	-	chr1.3:73879859-73879878	MS.gene029547:CDS	35.0%
	ACTGTCAATGTCAAAGTTGT+AGG	-	chr1.3:73879741-73879760	MS.gene029547:intron	35.0%
	ACTTCCTGAACTTAAACCAT+TGG	-	chr1.3:73878443-73878462	MS.gene029547:CDS	35.0%
	ATCCGACCAATATACAAAAC+AGG	+	chr1.3:73878480-73878499	None:intergenic	35.0%
	ATGTCAAAGTTGTAGGATTG+TGG	-	chr1.3:73879748-73879767	MS.gene029547:intron	35.0%
	CACTTAAAGAAACCAGAAGT+CGG	-	chr1.3:73880233-73880252	MS.gene029547:intron	35.0%
	CGAAAAAAACTCACAATCTC+GGG	+	chr1.3:73880745-73880764	None:intergenic	35.0%
	GAAAAAAACTCACAATCTCG+GGG	+	chr1.3:73880744-73880763	None:intergenic	35.0%
	GCGAAAAAAACTCACAATCT+CGG	+	chr1.3:73880746-73880765	None:intergenic	35.0%
	GGAAATTCTCAATCTCTTGA+TGG	+	chr1.3:73878670-73878689	None:intergenic	35.0%
	GTAGGTAGCAAAAATTGTTG+CGG	-	chr1.3:73879360-73879379	MS.gene029547:intron	35.0%
	GTTTCTTTAAGTGCTTCAAC+TGG	+	chr1.3:73880226-73880245	None:intergenic	35.0%
	TAAGAGGATCAACAATCCTT+GGG	-	chr1.3:73879609-73879628	MS.gene029547:intron	35.0%
	TAGAGGCTTATGAAAAGATG+AGG	-	chr1.3:73879834-73879853	MS.gene029547:intron	35.0%
	TCCGACCAATATACAAAACA+GGG	+	chr1.3:73878479-73878498	None:intergenic	35.0%
	TCCTAACTACTATTTGGGTA+TGG	+	chr1.3:73879863-73879882	None:intergenic	35.0%
	TGTCAAAGTTGTAGGATTGT+GGG	-	chr1.3:73879749-73879768	MS.gene029547:intron	35.0%
	TTAAGAGGATCAACAATCCT+TGG	-	chr1.3:73879608-73879627	MS.gene029547:intron	35.0%
!	ACCGGAAAATCAAGACATTT+TGG	-	chr1.3:73879223-73879242	MS.gene029547:intron	35.0%
!	ATGTGGGGTATTTGGTTAAA+AGG	+	chr1.3:73879931-73879950	None:intergenic	35.0%
!	CCCAAAATGTCTTGATTTTC+CGG	+	chr1.3:73879227-73879246	None:intergenic	35.0%
!	CCGGAAAATCAAGACATTTT+GGG	-	chr1.3:73879224-73879243	MS.gene029547:intron	35.0%
!	GAACACAAAAAGTTGGTTGA+TGG	-	chr1.3:73880655-73880674	MS.gene029547:CDS	35.0%
!	GTGGGATTTTTCTTTGTAGA+TGG	-	chr1.3:73880457-73880476	MS.gene029547:CDS	35.0%
!	TCTTCCCCTGTTTTGTATAT+TGG	-	chr1.3:73878471-73878490	MS.gene029547:intron	35.0%
!	TTCTCCAATGGTTTAAGTTC+AGG	+	chr1.3:73878450-73878469	None:intergenic	35.0%
!!	GCCTTCTAGTTACTTGTTTT+AGG	-	chr1.3:73879071-73879090	MS.gene029547:intron	35.0%
!!!	GCAGCTTATTTTGGACAATT+TGG	-	chr1.3:73878642-73878661	MS.gene029547:intron	35.0%
	ACACAAAGGCTTAACCTTTG+AGG	+	chr1.3:73878986-73879005	None:intergenic	40.0%
	AGGTTAAGCCTTTGTGTATC+AGG	-	chr1.3:73878989-73879008	MS.gene029547:intron	40.0%
	CATAGAATTTGAATCTCCCG+AGG	-	chr1.3:73879249-73879268	MS.gene029547:intron	40.0%
	CCGACCAATATACAAAACAG+GGG	+	chr1.3:73878478-73878497	None:intergenic	40.0%
	CTAGGATGAACATGTTCTGA+AGG	+	chr1.3:73879439-73879458	None:intergenic	40.0%
	GTACCACAAAAACCTGTAGT+AGG	+	chr1.3:73879417-73879436	None:intergenic	40.0%
	TATACTAAATGCCATGCCTG+AGG	-	chr1.3:73880383-73880402	MS.gene029547:intron	40.0%
	TATATTGGTCGGATTCCACA+TGG	-	chr1.3:73878486-73878505	MS.gene029547:intron	40.0%
	TTCTATGAGAAGGAGATGGA+AGG	-	chr1.3:73878510-73878529	MS.gene029547:intron	40.0%
	TTTAAGTGCTTCAACTGGCT+AGG	+	chr1.3:73880221-73880240	None:intergenic	40.0%
	TTTAGCACCCATTTCCTCAA+AGG	-	chr1.3:73878969-73878988	MS.gene029547:intron	40.0%
	TTTGAGGAAATGGGTGCTAA+AGG	+	chr1.3:73878970-73878989	None:intergenic	40.0%
!	AACAAGTAACTAGAAGGCAC+AGG	+	chr1.3:73879069-73879088	None:intergenic	40.0%
!	ACAAGGTATCTAGTGTGATG+AGG	-	chr1.3:73880541-73880560	MS.gene029547:intron	40.0%
!	ACACCTACTACAGGTTTTTG+TGG	-	chr1.3:73879411-73879430	MS.gene029547:intron	40.0%
!	AGGCTTAACCTTTGAGGAAA+TGG	+	chr1.3:73878980-73878999	None:intergenic	40.0%
!	CCCCTGTTTTGTATATTGGT+CGG	-	chr1.3:73878475-73878494	MS.gene029547:intron	40.0%
!	CGAGAGTTTTGCTCTTTTTC+AGG	+	chr1.3:73879955-73879974	None:intergenic	40.0%
!	CTATGTCTAATTGCTGTTGC+AGG	-	chr1.3:73880817-73880836	MS.gene029547:CDS	40.0%
!	GAAAGCATAACCAACCTAGA+AGG	+	chr1.3:73879775-73879794	None:intergenic	40.0%
!	GCTTTTTGAACACCTACTAC+AGG	-	chr1.3:73879402-73879421	MS.gene029547:intron	40.0%
!	GGCTTAACCTTTGAGGAAAT+GGG	+	chr1.3:73878979-73878998	None:intergenic	40.0%
!!	TCAATTTCGAGAGTGTCCAA+GGG	+	chr1.3:73880507-73880526	None:intergenic	40.0%
!!	TTATCTTCTTTGGAGCAGAC+TGG	+	chr1.3:73880853-73880872	None:intergenic	40.0%
!!	TTCAATTTCGAGAGTGTCCA+AGG	+	chr1.3:73880508-73880527	None:intergenic	40.0%
!!!	GGGGGATTTTCTAGAATCAT+AGG	-	chr1.3:73879634-73879653	MS.gene029547:intron	40.0%
!!!	TGAGCATGCTGCTGATTTTT+TGG	-	chr1.3:73878310-73878329	MS.gene029547:intron	40.0%
!!!	TTGCTCTTTTTCAGGCATGT+GGG	+	chr1.3:73879947-73879966	None:intergenic	40.0%
!!!	TTTGCTCTTTTTCAGGCATG+TGG	+	chr1.3:73879948-73879967	None:intergenic	40.0%
	AAATCAGCAGCATGCTCAGA+TGG	+	chr1.3:73878308-73878327	None:intergenic	45.0%
	ACAGGGGAAGAATTCTCCAA+TGG	+	chr1.3:73878462-73878481	None:intergenic	45.0%
	AGGATCAACAATCCTTGGGT+GGG	-	chr1.3:73879613-73879632	MS.gene029547:intron	45.0%
	CATATCGCGCAATGTTCTGA+AGG	-	chr1.3:73879890-73879909	MS.gene029547:intron	45.0%
	CGTAAAAAGATAGAGGCTGC+TGG	-	chr1.3:73880703-73880722	MS.gene029547:intron	45.0%
	TCCACATGGCTTCTATGAGA+AGG	-	chr1.3:73878500-73878519	MS.gene029547:intron	45.0%
	TCCTTCTCATAGAAGCCATG+TGG	+	chr1.3:73878504-73878523	None:intergenic	45.0%
	TGGCTTCTATGAGAAGGAGA+TGG	-	chr1.3:73878506-73878525	MS.gene029547:intron	45.0%
	TTGACAGTATCATCACGCTG+TGG	+	chr1.3:73879729-73879748	None:intergenic	45.0%
!	GTCTAATTGCTGTTGCAGGT+GGG	-	chr1.3:73880821-73880840	MS.gene029547:CDS	45.0%
!	TGTCTAATTGCTGTTGCAGG+TGG	-	chr1.3:73880820-73880839	MS.gene029547:CDS	45.0%
!	TTTCAGGCATGTGGGGTATT+TGG	+	chr1.3:73879939-73879958	None:intergenic	45.0%
!!	ACCAGAAGTCGGTTTTCTCA+AGG	-	chr1.3:73880244-73880263	MS.gene029547:intron	45.0%
!!	ATTTTGGTGTAGCCGTTGGA+AGG	-	chr1.3:73878405-73878424	MS.gene029547:CDS	45.0%
!!	CTTGATTTTGGTGTAGCCGT+TGG	-	chr1.3:73878401-73878420	MS.gene029547:CDS	45.0%
!!!	TGCTCTTTTTCAGGCATGTG+GGG	+	chr1.3:73879946-73879965	None:intergenic	45.0%
!!!	AGAATTATTTTTAATTTTTT+TGG	-	chr1.3:73880351-73880370	MS.gene029547:intron	5.0%
	AGTTCAGGAAGTTTGCGACC+AGG	+	chr1.3:73878435-73878454	None:intergenic	50.0%
	ATCAACAATCCTTGGGTGGG+GGG	-	chr1.3:73879616-73879635	MS.gene029547:intron	50.0%
	CAATTACCGCTACAAGCCCT+TGG	-	chr1.3:73880488-73880507	MS.gene029547:intron	50.0%
	GAGGATCAACAATCCTTGGG+TGG	-	chr1.3:73879612-73879631	MS.gene029547:intron	50.0%
	GATCAACAATCCTTGGGTGG+GGG	-	chr1.3:73879615-73879634	MS.gene029547:intron	50.0%
	GGATCAACAATCCTTGGGTG+GGG	-	chr1.3:73879614-73879633	MS.gene029547:intron	50.0%
	TGAACGAGAGCGACATGACA+AGG	-	chr1.3:73880524-73880543	MS.gene029547:intron	50.0%
	TGTAGGATTGTGGGCCTTCT+AGG	-	chr1.3:73879758-73879777	MS.gene029547:intron	50.0%
!	GCCTTGAGAAAACCGACTTC+TGG	+	chr1.3:73880248-73880267	None:intergenic	50.0%
!!	GTCGGTTTTCTCAAGGCCTA+AGG	-	chr1.3:73880251-73880270	MS.gene029547:intron	50.0%
!!	TCTTCTTTGGAGCAGACTGG+AGG	+	chr1.3:73880850-73880869	None:intergenic	50.0%
	CTAGAAAATCCCCCCACCCA+AGG	+	chr1.3:73879628-73879647	None:intergenic	55.0%
	GAGTGTCCAAGGGCTTGTAG+CGG	+	chr1.3:73880497-73880516	None:intergenic	55.0%
	GGATTGTGGGCCTTCTAGGT+TGG	-	chr1.3:73879762-73879781	MS.gene029547:intron	55.0%
	TTGGTGTAGCCGTTGGAAGG+TGG	-	chr1.3:73878408-73878427	MS.gene029547:CDS	55.0%
	CGACCAGGACCACCTTCCAA+CGG	+	chr1.3:73878420-73878439	None:intergenic	60.0%
	TAGCCGTTGGAAGGTGGTCC+TGG	-	chr1.3:73878414-73878433	MS.gene029547:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	73878236	73880886	73878236	ID=MS.gene029547
chr1.3	mRNA	73878236	73880886	73878236	ID=MS.gene029547.t1;Parent=MS.gene029547
chr1.3	exon	73880791	73880886	73880791	ID=MS.gene029547.t1.exon1;Parent=MS.gene029547.t1
chr1.3	CDS	73880791	73880886	73880791	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73880591	73880705	73880591	ID=MS.gene029547.t1.exon2;Parent=MS.gene029547.t1
chr1.3	CDS	73880591	73880705	73880591	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73880421	73880476	73880421	ID=MS.gene029547.t1.exon3;Parent=MS.gene029547.t1
chr1.3	CDS	73880421	73880476	73880421	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73879852	73879899	73879852	ID=MS.gene029547.t1.exon4;Parent=MS.gene029547.t1
chr1.3	CDS	73879852	73879899	73879852	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73879661	73879758	73879661	ID=MS.gene029547.t1.exon5;Parent=MS.gene029547.t1
chr1.3	CDS	73879661	73879758	73879661	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73878577	73878646	73878577	ID=MS.gene029547.t1.exon6;Parent=MS.gene029547.t1
chr1.3	CDS	73878577	73878646	73878577	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73878372	73878482	73878372	ID=MS.gene029547.t1.exon7;Parent=MS.gene029547.t1
chr1.3	CDS	73878372	73878482	73878372	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1
chr1.3	exon	73878236	73878283	73878236	ID=MS.gene029547.t1.exon8;Parent=MS.gene029547.t1
chr1.3	CDS	73878236	73878283	73878236	ID=cds.MS.gene029547.t1;Parent=MS.gene029547.t1

Gene Sequence

>MS.gene029547

ATGGGGACGAAGGCAAAGAAAGTTATGAAGAAGAAGAGTTTGAAAAGGGTCAATGCTATTAACAATAAACCATCTGAGCATGCTGCTGATTTTTTGGTATGTTATTGTTCATAACACTTTTTCTCTCAATTTTTTGTTGTTGATGGTGTTTTTGATTATTTGTTGCTTGATTTTGGTGTAGCCGTTGGAAGGTGGTCCTGGTCGCAAACTTCCTGAACTTAAACCATTGGAGAATTCTTCCCCTGTTTTGTATATTGGTCGGATTCCACATGGCTTCTATGAGAAGGAGATGGAAGGTATCTGCTTATACTTTTAGATTATTTTTTTATCTTTATGTTTTCTTAATTTCTAGATTGTTATTTAATTTAACTTGAAAGAATATGTGTTTATGAATTAATTTGTTTATGCAGCTTATTTTGGACAATTTGGAACCATCAAGAGATTGAGAATTTCCAGAAATAAAAAGGTTAAGCTCTTATACTTCTTTTCGTCTTGCTTTGTTTGCTTAGACTTGTATCAACATGATGATGATGATTTGTGGCTTTGCTTTGTTTACTTTATCGAATTACTCTGTGTCATCCATTAGAACTATAATTTCGATGATAATTTTTCTAGAATGTTTCAGTCTAATGTATATTGGTTATCTTTTAATTTTAATAAATATTTTTGATGAACATTGCAAATTCTTCAAATTTGTTGTTAAGTAGTTCTCATGATACTTAGTTCTTCTGCCTTTAGCACCCATTTCCTCAAAGGTTAAGCCTTTGTGTATCAGGAATTCTATCGTTTTTATTTGGTTGGTTCTTGACTATTTTCTTTGATTTTTGACACCTGTGCCTTCTAGTTACTTGTTTTAGGTAGAATGCTCGATTTCAACAATATTTAGTTAGTTAACTACCTTCGATCTTCATTGATATATATTGCTCCTTTTTGATTAATATTGATAACACATTTTTTTTTTTTTTTTTTTTTTTTTATGTTTAACAGACCGGAAAATCAAGACATTTTGGGTTCATAGAATTTGAATCTCCCGAGGTAAAATTTATTTTTCTGATTATTGTGTTGTGATTTTGATTTTTGGTGTATAAACTCTTGTTTGTGCTGATGTTTTTTGGTTTTGTTTTGTAGGTAGCAAAAATTGTTGCGGATACTATGCACAATTATTTGCTTTTTGAACACCTACTACAGGTTTTTGTGGTACCTTCAGAACATGTTCATCCTAGAATGTAAGTTACTAATTAACTTGTTAATTCGTTATCCATATGTATTTTTGTTTAAGGCTTCGTAATTAGTCTGTTATATTCTCTTTTCTAGTTGTTTTTTTTTTCTCTTGTGTTGGAAGAGAGAGTTTATTATGAGAAAACAAGAAATTTTAAGAGGATCAACAATCCTTGGGTGGGGGGATTTTCTAGAATCATAGGAAAGGTAAATCAGCTCACAAACTTACCTATCCATCAAAATATCAGATTAACATGATTATGGCTATGGTTCCACAGCGTGATGATACTGTCAATGTCAAAGTTGTAGGATTGTGGGCCTTCTAGGTTGGTTATGCTTTCATCCATCATGTTTATTTTGATCTCTTCCCCAAAATAAATTAGAGGCTTATGAAAAGATGAGGACACCATACCCAAATAGTAGTTAGGAAAACTATCATATCGCGCAATGTTCTGAAGGAAATGTCTAGCACTGCCTTTTAACCAAATACCCCACATGCCTGAAAAAGAGCAAAACTCTCGAGCATTTTCCTACCTTGTGTTAAAATGTAAGATGTAAGCTGACATATCTGGTAAGTCAGTTTGTTTGAAATCATAAAGAAGGAAAATAGGGAAAATGCAAGAGAAATTCCAATATAATACTATTTGTATTTGAATTAGCTGACTGAAAGCTGATACAGAAGCAGCCGTTTGTTTAGAGATAAAAGCAACAGTGATTCGCTTTTGTGCACACTTGAAACTGTTTAATTATGTCAACGAAATAATCCTAGCCAGTTGAAGCACTTAAAGAAACCAGAAGTCGGTTTTCTCAAGGCCTAAGGCTATATAATGATGTACTGTACAGAATGCAATTATAAACCAACATATCAGTCATTTGAAAACAATAGAAGCATGTAGCAGAATTATTTTTAATTTTTTTGGAACTAATGGTATACTAAATGCCATGCCTGAGGTTAAATAATTTGTTTATTTTCTTAACATAATCAAGAAGAATAAATTAAAAGGTGGGATTTTTCTTTGTAGATGGAAAGGATTCAATTACCGCTACAAGCCCTTGGACACTCTCGAAATTGAACGAGAGCGACATGACAAGGTATCTAGTGTGATGAGGAAGTATATCATTTGTATTTTGTTAGTCTGGTGCTCTGTATAAAAAGAAAATGTACTAATTATTGTTATTATTTCAGGAAAGAACATTGGAAGAACACAAAAAGTTGGTTGATGGAGTTATGAAACGTGACAAAAAACGACGTAAAAAGATAGAGGCTGCTGGCATTGATTATGAATGCCCCGAGATTGTGAGTTTTTTTCGCCTTTCTTTGACTGATTAGTTGTTTTGATTGTTGTCTTGATCTTTTCTCATGCTATGTCTAATTGCTGTTGCAGGTGGGTAACCTCCAGTCTGCTCCAAAGAAGATAAAGTTTGAAGACTGA

Protein sequence

>MS.gene029547.t1

MGTKAKKVMKKKSLKRVNAINNKPSEHAADFLPLEGGPGRKLPELKPLENSSPVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRISRNKKTGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVFVVPSEHVHPRIWKGFNYRYKPLDTLEIERERHDKERTLEEHKKLVDGVMKRDKKRRKKIEAAGIDYECPEIVGNLQSAPKKIKFED