Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012333.t1 | GAU24300.1 | 86.2 | 210 | 27 | 1 | 1 | 210 | 35 | 242 | 3.80E-99 | 370.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012333.t1 | O74978 | 45.2 | 155 | 85 | 0 | 38 | 192 | 92 | 246 | 2.8e-34 | 146.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012333.t1 | A0A2Z6ML98 | 86.2 | 210 | 27 | 1 | 1 | 210 | 35 | 242 | 2.8e-99 | 370.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012333.t1 | MTR_4g127330 | 93.855 | 179 | 11 | 0 | 1 | 179 | 1 | 179 | 1.70e-124 | 349 |
| MS.gene012333.t1 | MTR_1g108290 | 88.205 | 195 | 21 | 1 | 16 | 210 | 20 | 212 | 3.15e-119 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012333.t1 | AT5G04600 | 62.304 | 191 | 71 | 1 | 20 | 209 | 28 | 218 | 6.51e-91 | 266 |
Find 39 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGGAAAATCAAGACATTT+TGG | 0.197189 | 8.4:-7303127 | MS.gene012333:CDS |
| ACTTCGAACTTTATCTTCTT+TGG | 0.221836 | 8.4:+7301507 | None:intergenic |
| GGCAATTCTCAATCTCTTAA+TGG | 0.261298 | 8.4:+7303162 | None:intergenic |
| CATGTCGTTCCCGTTCAATT+TGG | 0.309401 | 8.4:+7301854 | None:intergenic |
| CAGCCGTTGGATTGTGGTCC+TGG | 0.355366 | 8.4:-7303366 | MS.gene012333:CDS |
| GTGCATGGCTTTCTTTGCCT+TGG | 0.362218 | 8.4:+7303535 | None:intergenic |
| AACTTTATCTTCTTTGGAGC+AGG | 0.403899 | 8.4:+7301513 | None:intergenic |
| ATGCGAGCAATGTACAGAAC+AGG | 0.435394 | 8.4:+7303303 | None:intergenic |
| CAATTATCGTTACAAGCCTC+TGG | 0.449754 | 8.4:-7301884 | MS.gene012333:CDS |
| TAATTAGTAACTTACAAATT+GGG | 0.454040 | 8.4:+7302989 | None:intergenic |
| GGACTCTCTCCAAATTGAAC+GGG | 0.463008 | 8.4:-7301863 | MS.gene012333:CDS |
| TTATCTTCTTTGGAGCAGGC+TGG | 0.486343 | 8.4:+7301517 | None:intergenic |
| GCAGCAGCAGCAGGGTGAGA+TGG | 0.504318 | 8.4:+7303485 | None:intergenic |
| ATTTAAGTTCAGGAAGTTTG+CGG | 0.507275 | 8.4:+7303343 | None:intergenic |
| AAAACGTCGTAAAATGATAG+AGG | 0.508535 | 8.4:-7301674 | MS.gene012333:CDS |
| TACATTGCTCGCATTCCACA+CGG | 0.516540 | 8.4:-7303294 | MS.gene012333:CDS |
| TTGTCTCAGCCGTTGGATTG+TGG | 0.523207 | 8.4:-7303372 | MS.gene012333:intron |
| ACTTCCTGAACTTAAATCCC+TGG | 0.525683 | 8.4:-7303337 | MS.gene012333:CDS |
| GCCATTTCAGGAAAGAACAT+TGG | 0.534975 | 8.4:-7301740 | MS.gene012333:intron |
| AGTTCAGGAAGTTTGCGGCC+AGG | 0.544607 | 8.4:+7303348 | None:intergenic |
| TTAAGAGATTGAGAATTGCC+AGG | 0.546505 | 8.4:-7303159 | MS.gene012333:CDS |
| CCATGCACAAGAGTTTGAAA+AGG | 0.560682 | 8.4:-7303520 | MS.gene012333:CDS |
| TCTTCTTTGGAGCAGGCTGG+AGG | 0.568236 | 8.4:+7301520 | None:intergenic |
| TCCACACGGGTTCTACGAGA+TGG | 0.570256 | 8.4:-7303280 | MS.gene012333:CDS |
| CATAGAATTTGAATCTCCTG+AGG | 0.575091 | 8.4:-7303101 | MS.gene012333:CDS |
| GAGCATTGAGATGGGGACCA+AGG | 0.576294 | 8.4:-7303552 | None:intergenic |
| TGGACTCTCTCCAAATTGAA+CGG | 0.577893 | 8.4:-7301864 | MS.gene012333:CDS |
| GGGACATTCATAATCAATGC+CGG | 0.584899 | 8.4:+7301648 | None:intergenic |
| CGGGTTCTACGAGATGGAGA+TGG | 0.590555 | 8.4:-7303274 | MS.gene012333:CDS |
| CGTAAAATGATAGAGGCTGC+CGG | 0.596257 | 8.4:-7301667 | MS.gene012333:CDS |
| TTGGGATGAACATCTTCTGA+AGG | 0.613448 | 8.4:+7303007 | None:intergenic |
| TGCGAGCAATGTACAGAACA+GGG | 0.622218 | 8.4:+7303304 | None:intergenic |
| CGGCCAGGACCACAATCCAA+CGG | 0.630149 | 8.4:+7303363 | None:intergenic |
| TGAACGGGAACGACATGACA+AGG | 0.640978 | 8.4:-7301848 | MS.gene012333:intron |
| ACATTGCTCGCATTCCACAC+GGG | 0.659129 | 8.4:-7303293 | MS.gene012333:CDS |
| TTCTACGAGATGGAGATGGA+TGG | 0.665561 | 8.4:-7303270 | MS.gene012333:intron |
| TCCATCTCGTAGAACCCGTG+TGG | 0.670939 | 8.4:+7303279 | None:intergenic |
| TCAATTTGGAGAGAGTCCAG+AGG | 0.681598 | 8.4:+7301868 | None:intergenic |
| GCGAGCAATGTACAGAACAG+GGG | 0.718926 | 8.4:+7303305 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTATTAAAAAAAAAAAAG+AGG | - | chr8.4:7302702-7302721 | MS.gene012333:intron | 10.0% |
| !! | ACTATTCATTTATATATAAG+AGG | - | chr8.4:7302730-7302749 | MS.gene012333:intron | 15.0% |
| !! | ATAATCATAAAGATGTTTAT+CGG | + | chr8.4:7302290-7302309 | None:intergenic | 15.0% |
| !! | ATATGTGTTTATCAATTTAT+TGG | - | chr8.4:7301830-7301849 | MS.gene012333:intron | 15.0% |
| !! | TAATTAGTAACTTACAAATT+GGG | + | chr8.4:7302059-7302078 | None:intergenic | 15.0% |
| !! | TTTAACTAGAATTATTTGAA+AGG | - | chr8.4:7302221-7302240 | MS.gene012333:intron | 15.0% |
| !!! | TTTTGTAATTGTATTTTGTA+CGG | + | chr8.4:7302962-7302981 | None:intergenic | 15.0% |
| !! | AAAATAAGAAATTCTATTGG+AGG | - | chr8.4:7302175-7302194 | MS.gene012333:intron | 20.0% |
| !! | AACAGCAATTAGATATAATA+TGG | + | chr8.4:7303493-7303512 | None:intergenic | 20.0% |
| !! | GAAACAAATCATTTAAACTT+AGG | + | chr8.4:7303075-7303094 | None:intergenic | 20.0% |
| !! | GAGAAAATAAGAAATTCTAT+TGG | - | chr8.4:7302172-7302191 | MS.gene012333:intron | 20.0% |
| !! | GATAAACATCTTTATGATTA+TGG | - | chr8.4:7302289-7302308 | MS.gene012333:intron | 20.0% |
| !! | GTAATTAGTAACTTACAAAT+TGG | + | chr8.4:7302060-7302079 | None:intergenic | 20.0% |
| !!! | AAAAGTCTCTCATTTATTTT+GGG | + | chr8.4:7302394-7302413 | None:intergenic | 20.0% |
| !!! | ATTGTATTTTGTACGATATA+TGG | + | chr8.4:7302857-7302876 | None:intergenic | 20.0% |
| !!! | TAAAAGTCTCTCATTTATTT+TGG | + | chr8.4:7302395-7302414 | None:intergenic | 20.0% |
| !!! | TACAGTTTAAGTTTTTTTGA+AGG | - | chr8.4:7301806-7301825 | MS.gene012333:intron | 20.0% |
| !!! | TATTCTTCTTGATGATATTT+AGG | + | chr8.4:7303101-7303120 | None:intergenic | 20.0% |
| !!! | TTACTAATTACTTCTTTTGT+AGG | - | chr8.4:7302069-7302088 | MS.gene012333:intron | 20.0% |
| !!! | TTTTACAGTTAATGTTATGT+TGG | + | chr8.4:7302886-7302905 | None:intergenic | 20.0% |
| !!! | TTTTGTATTTTGTGCTATTA+TGG | - | chr8.4:7303246-7303265 | MS.gene012333:intron | 20.0% |
| ! | CAAAAATGAATTTGAACTGA+TGG | - | chr8.4:7303033-7303052 | MS.gene012333:CDS | 25.0% |
| ! | CTAGAATTATTTGAAAGGAA+AGG | - | chr8.4:7302226-7302245 | MS.gene012333:intron | 25.0% |
| ! | TTTGTTAGAAATCAGAATGA+AGG | - | chr8.4:7302615-7302634 | MS.gene012333:intron | 25.0% |
| !! | TGCTGTTTGTATTGATATAT+TGG | - | chr8.4:7302675-7302694 | MS.gene012333:intron | 25.0% |
| AAAACGTCGTAAAATGATAG+AGG | - | chr8.4:7303371-7303390 | MS.gene012333:intron | 30.0% | |
| AATCAGTTGTTATGGAAAGA+AGG | - | chr8.4:7302821-7302840 | MS.gene012333:intron | 30.0% | |
| AATTTCCTTCCTTAACATTG+TGG | + | chr8.4:7302467-7302486 | None:intergenic | 30.0% | |
| ACTTCGAACTTTATCTTCTT+TGG | + | chr8.4:7303541-7303560 | None:intergenic | 30.0% | |
| AGATACCATACTCTAATAGT+TGG | - | chr8.4:7302423-7302442 | MS.gene012333:intron | 30.0% | |
| AGGAAATTCTAATAGTTGGT+AGG | - | chr8.4:7302479-7302498 | MS.gene012333:intron | 30.0% | |
| AGGAAGGAAATTCTAATAGT+TGG | - | chr8.4:7302475-7302494 | MS.gene012333:intron | 30.0% | |
| ATGGTTAAAAATTCGAGTCA+TGG | + | chr8.4:7303474-7303493 | None:intergenic | 30.0% | |
| ATGTTTATCGGATATCTAGA+GGG | + | chr8.4:7302278-7302297 | None:intergenic | 30.0% | |
| ATTTCCTTCCTTAACATTGT+GGG | + | chr8.4:7302466-7302485 | None:intergenic | 30.0% | |
| GTAACAGAACTATGTATTCA+AGG | - | chr8.4:7302918-7302937 | MS.gene012333:intron | 30.0% | |
| TATCATATCCCACAATGTTA+AGG | - | chr8.4:7302455-7302474 | MS.gene012333:intron | 30.0% | |
| TGGTGCTCTGTTTAAAAAAA+AGG | - | chr8.4:7303266-7303285 | MS.gene012333:intron | 30.0% | |
| TTAAAAATTCGAGTCATGGA+TGG | + | chr8.4:7303470-7303489 | None:intergenic | 30.0% | |
| TTGTACGGTATATCATTGTA+TGG | + | chr8.4:7302947-7302966 | None:intergenic | 30.0% | |
| ! | AACACAAAAAGTTGATTGAC+AGG | - | chr8.4:7303331-7303350 | MS.gene012333:CDS | 30.0% |
| ! | ACACAAAAAGTTGATTGACA+GGG | - | chr8.4:7303332-7303351 | MS.gene012333:CDS | 30.0% |
| ! | ACTGGAAAATCAAGACATTT+TGG | - | chr8.4:7301918-7301937 | MS.gene012333:intron | 30.0% |
| ! | ATCTAATTGCTGTTACAGAT+GGG | - | chr8.4:7303499-7303518 | MS.gene012333:CDS | 30.0% |
| ! | ATTTAAGTTCAGGAAGTTTG+CGG | + | chr8.4:7301705-7301724 | None:intergenic | 30.0% |
| ! | GTAAAGCTTTTCTTTGTAGA+TGG | - | chr8.4:7303130-7303149 | MS.gene012333:CDS | 30.0% |
| ! | GTATTTTGTACGATATATGG+TGG | + | chr8.4:7302854-7302873 | None:intergenic | 30.0% |
| ! | TATCTAATTGCTGTTACAGA+TGG | - | chr8.4:7303498-7303517 | MS.gene012333:CDS | 30.0% |
| ! | TTTTCCAGTCTTTTTATTCC+TGG | + | chr8.4:7301907-7301926 | None:intergenic | 30.0% |
| !! | TTGGTTTTTGCAGCTTATTT+TGG | - | chr8.4:7301849-7301868 | MS.gene012333:CDS | 30.0% |
| !!! | TCTCATTTATTTTGGGAGAA+GGG | + | chr8.4:7302387-7302406 | None:intergenic | 30.0% |
| AAGATGTAAGAGGACATATC+TGG | - | chr8.4:7302578-7302597 | MS.gene012333:intron | 35.0% | |
| ACCATACTCTAATAGTTGGT+AGG | - | chr8.4:7302427-7302446 | MS.gene012333:intron | 35.0% | |
| ATATCCCACAATGTTAAGGA+AGG | - | chr8.4:7302459-7302478 | MS.gene012333:intron | 35.0% | |
| ATTGCCAGGAATAAAAAGAC+TGG | - | chr8.4:7301900-7301919 | MS.gene012333:intron | 35.0% | |
| CATAGAATTTGAATCTCCTG+AGG | - | chr8.4:7301944-7301963 | MS.gene012333:intron | 35.0% | |
| CATATCTGGTCAATCAGTTT+AGG | - | chr8.4:7302592-7302611 | MS.gene012333:intron | 35.0% | |
| GATGATACTGTCAAAGTTGT+AGG | - | chr8.4:7302323-7302342 | MS.gene012333:intron | 35.0% | |
| GATGTTTATCGGATATCTAG+AGG | + | chr8.4:7302279-7302298 | None:intergenic | 35.0% | |
| GGCAATTCTCAATCTCTTAA+TGG | + | chr8.4:7301886-7301905 | None:intergenic | 35.0% | |
| TACGGTATATCATTGTATGG+CGG | + | chr8.4:7302944-7302963 | None:intergenic | 35.0% | |
| TCCAATGTTCTTTCCTGAAA+TGG | + | chr8.4:7303309-7303328 | None:intergenic | 35.0% | |
| TCCTACCAACTATTAGAGTA+TGG | + | chr8.4:7302431-7302450 | None:intergenic | 35.0% | |
| TTAAGAGATTGAGAATTGCC+AGG | - | chr8.4:7301886-7301905 | MS.gene012333:CDS | 35.0% | |
| TTTCAGACATGTGGTGTATT+TGG | + | chr8.4:7302520-7302539 | None:intergenic | 35.0% | |
| ! | ACAAGGTATTTAGTGTGATG+AGG | - | chr8.4:7303214-7303233 | MS.gene012333:intron | 35.0% |
| ! | TTCATTATTGCTGCCATTTC+AGG | - | chr8.4:7303293-7303312 | MS.gene012333:CDS | 35.0% |
| !! | AACTTTATCTTCTTTGGAGC+AGG | + | chr8.4:7303535-7303554 | None:intergenic | 35.0% |
| !! | TTTTCCAGGGATTTAAGTTC+AGG | + | chr8.4:7301715-7301734 | None:intergenic | 35.0% |
| !!! | CTCTCATTTATTTTGGGAGA+AGG | + | chr8.4:7302388-7302407 | None:intergenic | 35.0% |
| !!! | GCAGCTTATTTTGGACAATT+CGG | - | chr8.4:7301858-7301877 | MS.gene012333:CDS | 35.0% |
| !!! | TTTGGTCTTTTTCAGACATG+TGG | + | chr8.4:7302529-7302548 | None:intergenic | 35.0% |
| AACTGATTGCAGATGGCTTT+AGG | + | chr8.4:7302809-7302828 | None:intergenic | 40.0% | |
| ACTTCCTGAACTTAAATCCC+TGG | - | chr8.4:7301708-7301727 | MS.gene012333:CDS | 40.0% | |
| AGGCAAAAAAGCTCACAATC+TGG | + | chr8.4:7303422-7303441 | None:intergenic | 40.0% | |
| ATTGGAGGATCAACAATCCT+TGG | - | chr8.4:7302190-7302209 | MS.gene012333:intron | 40.0% | |
| CAATTATCGTTACAAGCCTC+TGG | - | chr8.4:7303161-7303180 | MS.gene012333:CDS | 40.0% | |
| CCATAACAACTGATTGCAGA+TGG | + | chr8.4:7302816-7302835 | None:intergenic | 40.0% | |
| CCATCTGCAATCAGTTGTTA+TGG | - | chr8.4:7302813-7302832 | MS.gene012333:intron | 40.0% | |
| CCATGCACAAGAGTTTGAAA+AGG | - | chr8.4:7301525-7301544 | MS.gene012333:CDS | 40.0% | |
| CCTCTTACATCTTACACACA+AGG | + | chr8.4:7302571-7302590 | None:intergenic | 40.0% | |
| CCTTGTGTGTAAGATGTAAG+AGG | - | chr8.4:7302568-7302587 | MS.gene012333:intron | 40.0% | |
| CTTACATCTTACACACAAGG+CGG | + | chr8.4:7302568-7302587 | None:intergenic | 40.0% | |
| GCAAAAAAGCTCACAATCTG+GGG | + | chr8.4:7303420-7303439 | None:intergenic | 40.0% | |
| GCCATTTCAGGAAAGAACAT+TGG | - | chr8.4:7303305-7303324 | MS.gene012333:CDS | 40.0% | |
| GGCAAAAAAGCTCACAATCT+GGG | + | chr8.4:7303421-7303440 | None:intergenic | 40.0% | |
| GGGAAAATGATTGAGAGCTT+TGG | + | chr8.4:7302547-7302566 | None:intergenic | 40.0% | |
| GGGACATTCATAATCAATGC+CGG | + | chr8.4:7303400-7303419 | None:intergenic | 40.0% | |
| GTACCACAAAAACCTGAAGA+AGG | + | chr8.4:7302019-7302038 | None:intergenic | 40.0% | |
| TATCGGATATCTAGAGGGAT+AGG | + | chr8.4:7302273-7302292 | None:intergenic | 40.0% | |
| TGGACTCTCTCCAAATTGAA+CGG | - | chr8.4:7303181-7303200 | MS.gene012333:CDS | 40.0% | |
| TGTTATGGAAAGAAGGCTCA+AGG | - | chr8.4:7302828-7302847 | MS.gene012333:intron | 40.0% | |
| TTACATCTTACACACAAGGC+GGG | + | chr8.4:7302567-7302586 | None:intergenic | 40.0% | |
| TTGGGATGAACATCTTCTGA+AGG | + | chr8.4:7302041-7302060 | None:intergenic | 40.0% | |
| ! | CCTTTTCAAACTCTTGTGCA+TGG | + | chr8.4:7301528-7301547 | None:intergenic | 40.0% |
| ! | GCAACAATTTTTGCAACCTC+AGG | + | chr8.4:7301963-7301982 | None:intergenic | 40.0% |
| ! | GCTTTTCTTTGTAGATGGAG+AGG | - | chr8.4:7303135-7303154 | MS.gene012333:CDS | 40.0% |
| !! | ACACCTTCTTCAGGTTTTTG+TGG | - | chr8.4:7302013-7302032 | MS.gene012333:intron | 40.0% |
| !!! | AACAGGGGAAGTATTTTCCA+GGG | + | chr8.4:7301728-7301747 | None:intergenic | 40.0% |
| AAAAAATCAGCAGCAGCAGC+AGG | + | chr8.4:7301572-7301591 | None:intergenic | 45.0% | |
| AAAAATCAGCAGCAGCAGCA+GGG | + | chr8.4:7301571-7301590 | None:intergenic | 45.0% | |
| AGGATCAACAATCCTTGGCT+GGG | - | chr8.4:7302195-7302214 | MS.gene012333:intron | 45.0% | |
| ATGCGAGCAATGTACAGAAC+AGG | + | chr8.4:7301745-7301764 | None:intergenic | 45.0% | |
| CATGTCGTTCCCGTTCAATT+TGG | + | chr8.4:7303194-7303213 | None:intergenic | 45.0% | |
| CGTAAAATGATAGAGGCTGC+CGG | - | chr8.4:7303378-7303397 | MS.gene012333:intron | 45.0% | |
| GGACTCTCTCCAAATTGAAC+GGG | - | chr8.4:7303182-7303201 | MS.gene012333:CDS | 45.0% | |
| GGATGGTCAAAACAGCTACT+CGG | + | chr8.4:7303453-7303472 | None:intergenic | 45.0% | |
| TACATTGCTCGCATTCCACA+CGG | - | chr8.4:7301751-7301770 | MS.gene012333:intron | 45.0% | |
| TCAATTTGGAGAGAGTCCAG+AGG | + | chr8.4:7303180-7303199 | None:intergenic | 45.0% | |
| TGCGAGCAATGTACAGAACA+GGG | + | chr8.4:7301744-7301763 | None:intergenic | 45.0% | |
| TTCTACGAGATGGAGATGGA+TGG | - | chr8.4:7301775-7301794 | MS.gene012333:intron | 45.0% | |
| ! | ACAGCTACTCGGTGAAAGAA+AGG | + | chr8.4:7303442-7303461 | None:intergenic | 45.0% |
| ! | GCTTTTCGAACACCTTCTTC+AGG | - | chr8.4:7302004-7302023 | MS.gene012333:intron | 45.0% |
| !! | GTTGATTTTGTCTCAGCCGT+TGG | - | chr8.4:7301666-7301685 | MS.gene012333:CDS | 45.0% |
| !! | TTATCTTCTTTGGAGCAGGC+TGG | + | chr8.4:7303531-7303550 | None:intergenic | 45.0% |
| !!! | GAACAGGGGAAGTATTTTCC+AGG | + | chr8.4:7301729-7301748 | None:intergenic | 45.0% |
| !!! | TGCTGCTGCTGCTGATTTTT+TGG | - | chr8.4:7301571-7301590 | MS.gene012333:intron | 45.0% |
| ACATTGCTCGCATTCCACAC+GGG | - | chr8.4:7301752-7301771 | MS.gene012333:intron | 50.0% | |
| ACGAGATGGAGATGGATGGT+AGG | - | chr8.4:7301779-7301798 | MS.gene012333:intron | 50.0% | |
| ATCAACAATCCTTGGCTGGG+GGG | - | chr8.4:7302198-7302217 | MS.gene012333:intron | 50.0% | |
| GAGGATCAACAATCCTTGGC+TGG | - | chr8.4:7302194-7302213 | MS.gene012333:intron | 50.0% | |
| GATCAACAATCCTTGGCTGG+GGG | - | chr8.4:7302197-7302216 | MS.gene012333:intron | 50.0% | |
| GCGAGCAATGTACAGAACAG+GGG | + | chr8.4:7301743-7301762 | None:intergenic | 50.0% | |
| GGATCAACAATCCTTGGCTG+GGG | - | chr8.4:7302196-7302215 | MS.gene012333:intron | 50.0% | |
| GTGCATGGCTTTCTTTGCCT+TGG | + | chr8.4:7301513-7301532 | None:intergenic | 50.0% | |
| TGAACGGGAACGACATGACA+AGG | - | chr8.4:7303197-7303216 | MS.gene012333:intron | 50.0% | |
| TTGTCTCAGCCGTTGGATTG+TGG | - | chr8.4:7301673-7301692 | MS.gene012333:CDS | 50.0% | |
| !! | ATGGCTTTAGGCGCTTCATG+CGG | + | chr8.4:7302797-7302816 | None:intergenic | 50.0% |
| AGTTCAGGAAGTTTGCGGCC+AGG | + | chr8.4:7301700-7301719 | None:intergenic | 55.0% | |
| CGGGTTCTACGAGATGGAGA+TGG | - | chr8.4:7301771-7301790 | MS.gene012333:intron | 55.0% | |
| CTAGTTAAACCCCCCAGCCA+AGG | + | chr8.4:7302210-7302229 | None:intergenic | 55.0% | |
| TCCACACGGGTTCTACGAGA+TGG | - | chr8.4:7301765-7301784 | MS.gene012333:intron | 55.0% | |
| TCCATCTCGTAGAACCCGTG+TGG | + | chr8.4:7301769-7301788 | None:intergenic | 55.0% | |
| TTAGGCGCTTCATGCGGCAA+GGG | + | chr8.4:7302791-7302810 | None:intergenic | 55.0% | |
| TTTAGGCGCTTCATGCGGCA+AGG | + | chr8.4:7302792-7302811 | None:intergenic | 55.0% | |
| !! | TCTTCTTTGGAGCAGGCTGG+AGG | + | chr8.4:7303528-7303547 | None:intergenic | 55.0% |
| CAGCCGTTGGATTGTGGTCC+TGG | - | chr8.4:7301679-7301698 | MS.gene012333:CDS | 60.0% | |
| CGGCCAGGACCACAATCCAA+CGG | + | chr8.4:7301685-7301704 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAGGGTGAGA+TGG | + | chr8.4:7301563-7301582 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 7301503 | 7303564 | 7301503 | ID=MS.gene012333 |
| chr8.4 | mRNA | 7301503 | 7303564 | 7301503 | ID=MS.gene012333.t1;Parent=MS.gene012333 |
| chr8.4 | exon | 7303475 | 7303564 | 7303475 | ID=MS.gene012333.t1.exon1;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7303475 | 7303564 | 7303475 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| chr8.4 | exon | 7303271 | 7303385 | 7303271 | ID=MS.gene012333.t1.exon2;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7303271 | 7303385 | 7303271 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| chr8.4 | exon | 7303004 | 7303205 | 7303004 | ID=MS.gene012333.t1.exon3;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7303004 | 7303205 | 7303004 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| chr8.4 | exon | 7301849 | 7301918 | 7301849 | ID=MS.gene012333.t1.exon4;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7301849 | 7301918 | 7301849 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| chr8.4 | exon | 7301642 | 7301752 | 7301642 | ID=MS.gene012333.t1.exon5;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7301642 | 7301752 | 7301642 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| chr8.4 | exon | 7301503 | 7301550 | 7301503 | ID=MS.gene012333.t1.exon6;Parent=MS.gene012333.t1 |
| chr8.4 | CDS | 7301503 | 7301550 | 7301503 | ID=cds.MS.gene012333.t1;Parent=MS.gene012333.t1 |
| Gene Sequence |
| Protein sequence |
