AlfalfaGEDB | MS.gene92970

M. sativa cultivar XinJiangDaYe / MS.gene92970

KEGG: K14838
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92970.t1	XP_003592542.1	97.2	213	6	0	1	213	1	213	7.30E-114	419.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92970.t1	O74978	47.1	155	82	0	40	194	92	246	3.4e-35	149.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92970.t1	G7IAS2	97.2	213	6	0	1	213	1	213	5.3e-114	419.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049580	MS.gene92970	0.805887	1.07E-49	-1.69E-46
MS.gene049824	MS.gene92970	0.855159	7.61E-62	-1.69E-46
MS.gene049825	MS.gene92970	0.881102	3.17E-70	-1.69E-46
MS.gene049873	MS.gene92970	0.885761	6.15E-72	-1.69E-46
MS.gene050277	MS.gene92970	0.83872	2.43E-57	-1.69E-46
MS.gene050303	MS.gene92970	0.828348	9.45E-55	-1.69E-46
MS.gene050427	MS.gene92970	0.828795	7.37E-55	-1.69E-46
MS.gene050916	MS.gene92970	0.846215	2.50E-59	-1.69E-46
MS.gene051330	MS.gene92970	0.835983	1.22E-56	-1.69E-46
MS.gene05134	MS.gene92970	0.810937	8.99E-51	-1.69E-46
MS.gene051700	MS.gene92970	0.820304	7.36E-53	-1.69E-46
MS.gene051746	MS.gene92970	0.810632	1.05E-50	-1.69E-46
MS.gene05188	MS.gene92970	0.827801	1.28E-54	-1.69E-46
MS.gene051903	MS.gene92970	0.834843	2.37E-56	-1.69E-46
MS.gene052947	MS.gene92970	0.852258	5.19E-61	-1.69E-46
MS.gene053122	MS.gene92970	0.8252	5.34E-54	-1.69E-46
MS.gene053195	MS.gene92970	0.804236	2.38E-49	-1.69E-46
MS.gene053226	MS.gene92970	0.824803	6.62E-54	-1.69E-46
MS.gene053294	MS.gene92970	0.843449	1.39E-58	-1.69E-46
MS.gene053401	MS.gene92970	0.847377	1.20E-59	-1.69E-46
MS.gene054328	MS.gene92970	0.812419	4.28E-51	-1.69E-46
MS.gene05548	MS.gene92970	0.809179	2.15E-50	-1.69E-46
MS.gene055555	MS.gene92970	0.870005	2.02E-66	-1.69E-46
MS.gene055808	MS.gene92970	0.904009	1.92E-79	-1.69E-46
MS.gene056075	MS.gene92970	0.823708	1.20E-53	-1.69E-46
MS.gene056091	MS.gene92970	0.890121	1.31E-73	-1.69E-46
MS.gene056403	MS.gene92970	0.833715	4.55E-56	-1.69E-46
MS.gene056605	MS.gene92970	0.828985	6.63E-55	-1.69E-46
MS.gene056631	MS.gene92970	0.851049	1.14E-60	-1.69E-46
MS.gene05689	MS.gene92970	0.81942	1.17E-52	-1.69E-46
MS.gene056986	MS.gene92970	0.811122	8.20E-51	-1.69E-46
MS.gene057094	MS.gene92970	0.802904	4.50E-49	-1.69E-46
MS.gene057705	MS.gene92970	0.847015	1.51E-59	-1.69E-46
MS.gene05953	MS.gene92970	0.82064	6.16E-53	-1.69E-46
MS.gene05954	MS.gene92970	0.858391	8.51E-63	-1.69E-46
MS.gene059935	MS.gene92970	0.860851	1.55E-63	-1.69E-46
MS.gene06001	MS.gene92970	0.862336	5.45E-64	-1.69E-46
MS.gene06011	MS.gene92970	0.807131	5.87E-50	-1.69E-46
MS.gene060365	MS.gene92970	0.801897	7.25E-49	-1.69E-46
MS.gene060429	MS.gene92970	0.869035	4.18E-66	-1.69E-46
MS.gene060586	MS.gene92970	0.829618	4.65E-55	-1.69E-46
MS.gene060763	MS.gene92970	0.834658	2.64E-56	-1.69E-46
MS.gene060830	MS.gene92970	0.883714	3.55E-71	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene92970	MS.gene034607	PPI
MS.gene92970	MS.gene45646	PPI
MS.gene92970	MS.gene045818	PPI
MS.gene92970	MS.gene047421	PPI
MS.gene92970	MS.gene54912	PPI
MS.gene92970	MS.gene047734	PPI
MS.gene92970	MS.gene79877	PPI
MS.gene92970	MS.gene045377	PPI
MS.gene049030	MS.gene92970	PPI
MS.gene92970	MS.gene064028	PPI
MS.gene92970	MS.gene030304	PPI
MS.gene92970	MS.gene75054	PPI
MS.gene92970	MS.gene001917	PPI
MS.gene92970	MS.gene000480	PPI
MS.gene92970	MS.gene003492	PPI
MS.gene92970	MS.gene75690	PPI
MS.gene92970	MS.gene067072	PPI
MS.gene06169	MS.gene92970	PPI
MS.gene92970	MS.gene40019	PPI
MS.gene92970	MS.gene80786	PPI
MS.gene92970	MS.gene90360	PPI
MS.gene92970	MS.gene73825	PPI
MS.gene92970	MS.gene040601	PPI
MS.gene92970	MS.gene75537	PPI
MS.gene92970	MS.gene39294	PPI
MS.gene92970	MS.gene81498	PPI
MS.gene92970	MS.gene000625	PPI
MS.gene92970	MS.gene40564	PPI
MS.gene92970	MS.gene065146	PPI
MS.gene92970	MS.gene94588	PPI
MS.gene92970	MS.gene059726	PPI
MS.gene92970	MS.gene003490	PPI
MS.gene89671	MS.gene92970	PPI
MS.gene92970	MS.gene47347	PPI
MS.gene92970	MS.gene064459	PPI
MS.gene92970	MS.gene051451	PPI
MS.gene92970	MS.gene68238	PPI
MS.gene92970	MS.gene39195	PPI
MS.gene92970	MS.gene37379	PPI
MS.gene92970	MS.gene77392	PPI
MS.gene92970	MS.gene81068	PPI
MS.gene92970	MS.gene46475	PPI
MS.gene92970	MS.gene073150	PPI
MS.gene92970	MS.gene018599	PPI
MS.gene53720	MS.gene92970	PPI
MS.gene92970	MS.gene08488	PPI
MS.gene92970	MS.gene25010	PPI
MS.gene92970	MS.gene002204	PPI
MS.gene92970	MS.gene004705	PPI
MS.gene92970	MS.gene99599	PPI
MS.gene92970	MS.gene061835	PPI
MS.gene92970	MS.gene037902	PPI
MS.gene92970	MS.gene98889	PPI
MS.gene92970	MS.gene09845	PPI
MS.gene92970	MS.gene41329	PPI
MS.gene92970	MS.gene059878	PPI
MS.gene92970	MS.gene044819	PPI
MS.gene050985	MS.gene92970	PPI
MS.gene92970	MS.gene045580	PPI
MS.gene92970	MS.gene060638	PPI
MS.gene92970	MS.gene022752	PPI
MS.gene92970	MS.gene52105	PPI
MS.gene92970	MS.gene045180	PPI
MS.gene51111	MS.gene92970	PPI
MS.gene92970	MS.gene041557	PPI
MS.gene92970	MS.gene053790	PPI
MS.gene92970	MS.gene64512	PPI
MS.gene92970	MS.gene034931	PPI
MS.gene92970	MS.gene80570	PPI
MS.gene92970	MS.gene91244	PPI
MS.gene92970	MS.gene30325	PPI
MS.gene92970	MS.gene071916	PPI
MS.gene92970	MS.gene90945	PPI
MS.gene063385	MS.gene92970	PPI
MS.gene044537	MS.gene92970	PPI
MS.gene92970	MS.gene07808	PPI
MS.gene039474	MS.gene92970	PPI
MS.gene92970	MS.gene44231	PPI
MS.gene92970	MS.gene07810	PPI
MS.gene92970	MS.gene028002	PPI
MS.gene92970	MS.gene057738	PPI
MS.gene92970	MS.gene020215	PPI
MS.gene92970	MS.gene060923	PPI
MS.gene92970	MS.gene43350	PPI
MS.gene92970	MS.gene20153	PPI
MS.gene92970	MS.gene017623	PPI
MS.gene92970	MS.gene98461	PPI
MS.gene92970	MS.gene039132	PPI
MS.gene92970	MS.gene81001	PPI
MS.gene92970	MS.gene006154	PPI
MS.gene92970	MS.gene038784	PPI
MS.gene92970	MS.gene77514	PPI
MS.gene92970	MS.gene035331	PPI
MS.gene92970	MS.gene32092	PPI
MS.gene92970	MS.gene032998	PPI
MS.gene92970	MS.gene55890	PPI
MS.gene92970	MS.gene60693	PPI
MS.gene92970	MS.gene88081	PPI
MS.gene92970	MS.gene77667	PPI
MS.gene92970	MS.gene88918	PPI
MS.gene92970	MS.gene99779	PPI
MS.gene92970	MS.gene072064	PPI
MS.gene92970	MS.gene018553	PPI
MS.gene92970	MS.gene002038	PPI
MS.gene92970	MS.gene40020	PPI
MS.gene92970	MS.gene70551	PPI
MS.gene92970	MS.gene29719	PPI
MS.gene92970	MS.gene23276	PPI
MS.gene92970	MS.gene031692	PPI
MS.gene92970	MS.gene061905	PPI
MS.gene92970	MS.gene94183	PPI
MS.gene92970	MS.gene011230	PPI
MS.gene069038	MS.gene92970	PPI
MS.gene92970	MS.gene006618	PPI
MS.gene92970	MS.gene69611	PPI
MS.gene92970	MS.gene047206	PPI
MS.gene92970	MS.gene057307	PPI
MS.gene92970	MS.gene029415	PPI
MS.gene86675	MS.gene92970	PPI
MS.gene92970	MS.gene07704	PPI
MS.gene92970	MS.gene036487	PPI
MS.gene92970	MS.gene59319	PPI
MS.gene92970	MS.gene031378	PPI
MS.gene95644	MS.gene92970	PPI
MS.gene92970	MS.gene012126	PPI
MS.gene92970	MS.gene95472	PPI
MS.gene92970	MS.gene32091	PPI
MS.gene92970	MS.gene66352	PPI
MS.gene92970	MS.gene003735	PPI
MS.gene92970	MS.gene59228	PPI
MS.gene92970	MS.gene95471	PPI
MS.gene92970	MS.gene059880	PPI
MS.gene92970	MS.gene010453	PPI
MS.gene92970	MS.gene01172	PPI
MS.gene92970	MS.gene004704	PPI
MS.gene92970	MS.gene00612	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92970.t1	MTR_1g108290	97.183	213	6	0	1	213	1	213	4.71e-154	425
MS.gene92970.t1	MTR_4g127330	86.339	183	19	3	1	181	1	179	5.26e-111	315

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92970.t1	AT5G04600	62.887	194	68	2	21	213	30	220	3.23e-91	267

Find 37 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCGGAAAATCAAGACATTT+TGG	0.167780	1.2:-80498824	MS.gene92970:CDS
TAATTAGTAACTTACATTCT+AGG	0.218865	1.2:+80498593	None:intergenic
GAGAATTTCCAGAAATAAAA+AGG	0.220241	1.2:-80499364	MS.gene92970:intron
TCTTCGAACTTTATCTTCTT+TGG	0.223112	1.2:+80497189	None:intergenic
TTTGTTTATGCAGCTTATTT+TGG	0.258280	1.2:-80499411	MS.gene92970:intron
CATGTCGCTCTCGTTCAATT+TGG	0.309167	1.2:+80497535	None:intergenic
GGAAATTCTCAATCTCTTGA+TGG	0.321409	1.2:+80499377	None:intergenic
TTCTCCAATGGTTTAAGTTC+AGG	0.362939	1.2:+80499597	None:intergenic
TGAAGAAGAAGAGTTTGAAA+AGG	0.405744	1.2:-80499783	MS.gene92970:CDS
ATCCGACCAATATACAAAAC+AGG	0.406291	1.2:+80499567	None:intergenic
GAAGAAGAAGAGTTTGAAAA+GGG	0.411573	1.2:-80499782	MS.gene92970:CDS
TAGCCGTTGGAAGGTGGTCC+TGG	0.447393	1.2:-80499630	MS.gene92970:CDS
TTATCTTCTTTGGAGCAGAC+TGG	0.474297	1.2:+80497199	None:intergenic
ACTTCCTGAACTTAAACCAT+TGG	0.494074	1.2:-80499601	MS.gene92970:CDS
TTCAATTTGGATAGTGTCCA+AGG	0.507498	1.2:+80497548	None:intergenic
CAAATAATTGTGCATAGTAT+CGG	0.509713	1.2:+80498667	None:intergenic
CAATTACCGCTACAAGCCCT+TGG	0.527491	1.2:-80497565	MS.gene92970:CDS
AAATCAGCAGCATGCTCAGA+TGG	0.536864	1.2:+80499739	None:intergenic
AGTTCAGGAAGTTTGCGACC+AGG	0.549597	1.2:+80499612	None:intergenic
ATTATTTCAGGAAAGAACAT+TGG	0.557020	1.2:-80497423	MS.gene92970:intron
CTAGGATGAACATGTTCTGA+AGG	0.579983	1.2:+80498611	None:intergenic
TCCACATGGCTTCTATGAGA+AGG	0.596594	1.2:-80499544	MS.gene92970:CDS
TTGGTGTAGCCGTTGGAAGG+TGG	0.596969	1.2:-80499636	MS.gene92970:intron
ACAGGGGAAGAATTCTCCAA+TGG	0.598445	1.2:+80499585	None:intergenic
CGACCAGGACCACCTTCCAA+CGG	0.599267	1.2:+80499627	None:intergenic
TATATTGGTCGGATTCCACA+TGG	0.600538	1.2:-80499558	MS.gene92970:CDS
TCAATTTGGATAGTGTCCAA+GGG	0.607262	1.2:+80497549	None:intergenic
TGGCTTCTATGAGAAGGAGA+TGG	0.607853	1.2:-80499538	MS.gene92970:CDS
TCTTCTTTGGAGCAGACTGG+AGG	0.628446	1.2:+80497202	None:intergenic
TGAACGAGAGCGACATGACA+AGG	0.631947	1.2:-80497529	MS.gene92970:intron
TCCGACCAATATACAAAACA+GGG	0.634212	1.2:+80499568	None:intergenic
TGATACCAAAATGGGGACGA+AGG	0.634975	1.2:-80499818	None:intergenic
TTCTATGAGAAGGAGATGGA+AGG	0.635681	1.2:-80499534	MS.gene92970:intron
CATAGAATTTGAATCTCCCG+AGG	0.652311	1.2:-80498798	MS.gene92970:intron
TCCTTCTCATAGAAGCCATG+TGG	0.660737	1.2:+80499543	None:intergenic
TAGTGTCCAAGGGCTTGTAG+CGG	0.693975	1.2:+80497559	None:intergenic
CCGACCAATATACAAAACAG+GGG	0.732963	1.2:+80499569	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATACAAATAGTGTTATAT+TGG	+	chr1.2:80499026-80499045	None:intergenic	15.0%
!!	ATCAAGAAGAATAAATTAAA+AGG	-	chr1.2:80499375-80499394	MS.gene92970:CDS	15.0%
!!	GTTATCAATATTAATCAAAA+AGG	+	chr1.2:80498111-80498130	None:intergenic	15.0%
!!!	CTAATTATTGTTATTATTTC+AGG	-	chr1.2:80499558-80499577	MS.gene92970:CDS	15.0%
!!!	TTTAATTTTTTTGGAACTAA+TGG	-	chr1.2:80499300-80499319	MS.gene92970:intron	15.0%
!!!	TTTTTTTTTTTCTCTTATGT+TGG	-	chr1.2:80498499-80498518	MS.gene92970:intron	15.0%
!!	AAGAAGAATAAATTAAAAGG+TGG	-	chr1.2:80499378-80499397	MS.gene92970:CDS	20.0%
!!	AGAAGAATAAATTAAAAGGT+GGG	-	chr1.2:80499379-80499398	MS.gene92970:CDS	20.0%
!!	ATATCAGATTAACATGATTA+TGG	-	chr1.2:80498642-80498661	MS.gene92970:CDS	20.0%
!!	TAAACAAATTATTTAACCTC+AGG	+	chr1.2:80499342-80499361	None:intergenic	20.0%
!!	TAATTAGTAACTTACATTCT+AGG	+	chr1.2:80498403-80498422	None:intergenic	20.0%
!!!	AGAAAAATAAATTTTACCTC+GGG	+	chr1.2:80498214-80498233	None:intergenic	20.0%
!!!	AGAAAACAAGAAATTTTAAG+AGG	-	chr1.2:80498540-80498559	MS.gene92970:intron	20.0%
!!!	ATAAGCCTCTAATTTATTTT+GGG	+	chr1.2:80498767-80498786	None:intergenic	20.0%
!!!	ATGTTAATCTGATATTTTGA+GGG	+	chr1.2:80498637-80498656	None:intergenic	20.0%
!!!	ATTTTTTGGTTTTGTTTTGT+AGG	-	chr1.2:80498288-80498307	MS.gene92970:intron	20.0%
!!!	CAGAAAAATAAATTTTACCT+CGG	+	chr1.2:80498215-80498234	None:intergenic	20.0%
!!!	TCCATATGTATTTTTGTTTA+AGG	-	chr1.2:80498439-80498458	MS.gene92970:intron	20.0%
!!!	TTTTTTTATGTTTAACAGAC+CGG	-	chr1.2:80498151-80498170	MS.gene92970:intron	20.0%
!	AGAGATCAAAATAAACATGA+TGG	+	chr1.2:80498742-80498761	None:intergenic	25.0%
!	ATTATTTCAGGAAAGAACAT+TGG	-	chr1.2:80499570-80499589	MS.gene92970:CDS	25.0%
!	CAAATAATTGTGCATAGTAT+CGG	+	chr1.2:80498329-80498348	None:intergenic	25.0%
!	GAGAATTTCCAGAAATAAAA+AGG	-	chr1.2:80497629-80497648	MS.gene92970:intron	25.0%
!	GCCTTAAACAAAAATACATA+TGG	+	chr1.2:80498443-80498462	None:intergenic	25.0%
!	TATATATCAATGAAGATCGA+AGG	+	chr1.2:80498083-80498102	None:intergenic	25.0%
!	TGAAATCATGAAGGAAAATA+GGG	-	chr1.2:80498983-80499002	MS.gene92970:intron	25.0%
!	TGACATAATTAAACAGTTTC+AGG	+	chr1.2:80499128-80499147	None:intergenic	25.0%
!	TGTTTCAGTCTAATGTATAT+TGG	-	chr1.2:80497800-80497819	MS.gene92970:intron	25.0%
!	TTGAAATCATGAAGGAAAAT+AGG	-	chr1.2:80498982-80499001	MS.gene92970:intron	25.0%
!!	ATTTTTCTTTGTAGATGGAA+AGG	-	chr1.2:80499402-80499421	MS.gene92970:intron	25.0%
!!	CATAAGCCTCTAATTTATTT+TGG	+	chr1.2:80498768-80498787	None:intergenic	25.0%
!!	CATGTTAATCTGATATTTTG+AGG	+	chr1.2:80498638-80498657	None:intergenic	25.0%
!!	TCATTTGTATTTTGTTAGTC+TGG	-	chr1.2:80499511-80499530	MS.gene92970:intron	25.0%
!!	TCCTTTTATCTCTAAACAAA+CGG	+	chr1.2:80499082-80499101	None:intergenic	25.0%
!!	TTTGTTTATGCAGCTTATTT+TGG	-	chr1.2:80497582-80497601	MS.gene92970:intron	25.0%
!!	TTTTCAAATGACTGATATGT+TGG	+	chr1.2:80499254-80499273	None:intergenic	25.0%
!!!	ACATCTTATATTTTAACGCA+AGG	+	chr1.2:80498933-80498952	None:intergenic	25.0%
!!!	ATTTTCTAGAATCATAGGAA+AGG	-	chr1.2:80498586-80498605	MS.gene92970:intron	25.0%
!!!	CATCGAAATTATAGTTCTAA+TGG	+	chr1.2:80497765-80497784	None:intergenic	25.0%
!!!	GATTATTTGTTGCTTGATTT+TGG	-	chr1.2:80497338-80497357	MS.gene92970:CDS	25.0%
!!!	GGAATTCTATCGTTTTTATT+TGG	-	chr1.2:80497957-80497976	MS.gene92970:intron	25.0%
!!!	TAAGCCTCTAATTTATTTTG+GGG	+	chr1.2:80498766-80498785	None:intergenic	25.0%
!!!	TCTCAATTTTTTGTTGTTGA+TGG	-	chr1.2:80497308-80497327	MS.gene92970:intron	25.0%
!!!	TGTGTTGTGATTTTGATTTT+TGG	-	chr1.2:80498240-80498259	MS.gene92970:intron	25.0%
!!!	TTCTATCGTTTTTATTTGGT+TGG	-	chr1.2:80497961-80497980	MS.gene92970:intron	25.0%
!!!	TTGTTTGTGCTGATATTTTT+TGG	-	chr1.2:80498274-80498293	MS.gene92970:intron	25.0%
	AAAAAAAAGCTCACAATCTC+GGG	+	chr1.2:80499685-80499704	None:intergenic	30.0%
	AAATTATTTAACCTCAGGCA+TGG	+	chr1.2:80499337-80499356	None:intergenic	30.0%
	ACAACTAATCAGTCAAAGAA+AGG	+	chr1.2:80499709-80499728	None:intergenic	30.0%
	ACCGTTTGTTTAGAGATAAA+AGG	-	chr1.2:80499078-80499097	MS.gene92970:intron	30.0%
	ACCTAAAACAAGTAACTAGA+AGG	+	chr1.2:80498022-80498041	None:intergenic	30.0%
	AGTTTCCCTAACTACTATTT+GGG	+	chr1.2:80498811-80498830	None:intergenic	30.0%
	ATAGAATTCCTGATACACAA+AGG	+	chr1.2:80497947-80497966	None:intergenic	30.0%
	ATTTCTTTAAGTGCTTCAAC+TGG	+	chr1.2:80499166-80499185	None:intergenic	30.0%
	CAAAAAAAAGCTCACAATCT+CGG	+	chr1.2:80499686-80499705	None:intergenic	30.0%
	CACTTAAAGAAATCAGAAGT+CGG	-	chr1.2:80499173-80499192	MS.gene92970:intron	30.0%
	CATGAGAAAAGATCAAGAAA+TGG	+	chr1.2:80499741-80499760	None:intergenic	30.0%
	GAAGAAGAAGAGTTTGAAAA+GGG	-	chr1.2:80497211-80497230	MS.gene92970:CDS	30.0%
	GATTAACATGATTATGGCTA+TGG	-	chr1.2:80498648-80498667	MS.gene92970:CDS	30.0%
	GTACATCATTATATAGCCTT+AGG	+	chr1.2:80499210-80499229	None:intergenic	30.0%
	TAGTTTCCCTAACTACTATT+TGG	+	chr1.2:80498812-80498831	None:intergenic	30.0%
	TCTTCCCCAAAATAAATTAG+AGG	-	chr1.2:80498759-80498778	MS.gene92970:intron	30.0%
	TCTTCGAACTTTATCTTCTT+TGG	+	chr1.2:80499807-80499826	None:intergenic	30.0%
	TGAAGAAGAAGAGTTTGAAA+AGG	-	chr1.2:80497210-80497229	MS.gene92970:CDS	30.0%
!	AACATGATGATGATGATTTG+TGG	-	chr1.2:80497703-80497722	MS.gene92970:intron	30.0%
!	CAGTTTGTTTGAAATCATGA+AGG	-	chr1.2:80498974-80498993	MS.gene92970:intron	30.0%
!!	AATCTGATATTTTGAGGGAT+AGG	+	chr1.2:80498632-80498651	None:intergenic	30.0%
!!	GAGCTTAACCTTTTTATTTC+TGG	+	chr1.2:80497640-80497659	None:intergenic	30.0%
!!!	CTTATATTTTAACGCAAGGT+TGG	+	chr1.2:80498929-80498948	None:intergenic	30.0%
	AAAGCGACGTAAAAAGATAG+AGG	-	chr1.2:80499636-80499655	MS.gene92970:intron	35.0%
	AAGATGTAAGCTGACATATC+TGG	-	chr1.2:80498946-80498965	MS.gene92970:intron	35.0%
	ACCATACCCAAATAGTAGTT+AGG	-	chr1.2:80498802-80498821	MS.gene92970:CDS	35.0%
	ACTTCCTGAACTTAAACCAT+TGG	-	chr1.2:80497392-80497411	MS.gene92970:CDS	35.0%
	AGAGGCTTATGAAATAGATG+AGG	-	chr1.2:80498777-80498796	MS.gene92970:intron	35.0%
	ATCCGACCAATATACAAAAC+AGG	+	chr1.2:80497429-80497448	None:intergenic	35.0%
	CCATACCCAAATAGTAGTTA+GGG	-	chr1.2:80498803-80498822	MS.gene92970:CDS	35.0%
	GATGATACTGTCAAAGTTGT+AGG	-	chr1.2:80498682-80498701	MS.gene92970:CDS	35.0%
	GGAAATTCTCAATCTCTTGA+TGG	+	chr1.2:80497619-80497638	None:intergenic	35.0%
	TAAGAGGATCAACAATCCTT+GGG	-	chr1.2:80498556-80498575	MS.gene92970:intron	35.0%
	TCAATTTGGATAGTGTCCAA+GGG	+	chr1.2:80499447-80499466	None:intergenic	35.0%
	TCCGACCAATATACAAAACA+GGG	+	chr1.2:80497428-80497447	None:intergenic	35.0%
	TGTCAAAGTTGTAGGATTGT+GGG	-	chr1.2:80498690-80498709	MS.gene92970:intron	35.0%
	TTAAGAGGATCAACAATCCT+TGG	-	chr1.2:80498555-80498574	MS.gene92970:intron	35.0%
	TTCAATTTGGATAGTGTCCA+AGG	+	chr1.2:80499448-80499467	None:intergenic	35.0%
!	ACCGGAAAATCAAGACATTT+TGG	-	chr1.2:80498169-80498188	MS.gene92970:intron	35.0%
!	ATGTGGGGTATTTGGTTAAA+AGG	+	chr1.2:80498874-80498893	None:intergenic	35.0%
!	ATTGGAAGAGCACAAAAAGT+TGG	-	chr1.2:80499588-80499607	MS.gene92970:CDS	35.0%
!	CCCAAAATGTCTTGATTTTC+CGG	+	chr1.2:80498173-80498192	None:intergenic	35.0%
!	CCGGAAAATCAAGACATTTT+GGG	-	chr1.2:80498170-80498189	MS.gene92970:intron	35.0%
!	GTGGGATTTTTCTTTGTAGA+TGG	-	chr1.2:80499397-80499416	MS.gene92970:CDS	35.0%
!	TCTTCCCCTGTTTTGTATAT+TGG	-	chr1.2:80497420-80497439	MS.gene92970:intron	35.0%
!	TTCTCCAATGGTTTAAGTTC+AGG	+	chr1.2:80497399-80497418	None:intergenic	35.0%
!!	ATCAGAAGTCGGTTTTCTTA+AGG	-	chr1.2:80499184-80499203	MS.gene92970:intron	35.0%
!!	GCCTTCTAGTTACTTGTTTT+AGG	-	chr1.2:80498018-80498037	MS.gene92970:intron	35.0%
!!!	GCAGCTTATTTTGGACAATT+TGG	-	chr1.2:80497591-80497610	MS.gene92970:intron	35.0%
	ACACAAAGGCTTAACCTTTG+AGG	+	chr1.2:80497933-80497952	None:intergenic	40.0%
	AGGTTAAGCCTTTGTGTATC+AGG	-	chr1.2:80497936-80497955	MS.gene92970:intron	40.0%
	CATAGAATTTGAATCTCCCG+AGG	-	chr1.2:80498195-80498214	MS.gene92970:intron	40.0%
	CATATCGTGCAATGTTCAGA+AGG	-	chr1.2:80498833-80498852	MS.gene92970:intron	40.0%
	CCCTAACTACTATTTGGGTA+TGG	+	chr1.2:80498806-80498825	None:intergenic	40.0%
	CCGACCAATATACAAAACAG+GGG	+	chr1.2:80497427-80497446	None:intergenic	40.0%
	CTAGGATGAACATGTTCTGA+AGG	+	chr1.2:80498385-80498404	None:intergenic	40.0%
	CTGTCAAAGTTGTAGGATTG+TGG	-	chr1.2:80498689-80498708	MS.gene92970:intron	40.0%
	GTACCACAAAAACCTGTAGT+AGG	+	chr1.2:80498363-80498382	None:intergenic	40.0%
	GTCAAAGTTGTAGGATTGTG+GGG	-	chr1.2:80498691-80498710	MS.gene92970:intron	40.0%
	TATACTAAATGCCATGCCTG+AGG	-	chr1.2:80499323-80499342	MS.gene92970:intron	40.0%
	TATATTGGTCGGATTCCACA+TGG	-	chr1.2:80497435-80497454	MS.gene92970:intron	40.0%
	TTCTATGAGAAGGAGATGGA+AGG	-	chr1.2:80497459-80497478	MS.gene92970:intron	40.0%
	TTTAAGTGCTTCAACTGGCT+AGG	+	chr1.2:80499161-80499180	None:intergenic	40.0%
	TTTAGCACCCATTTCCTCAA+AGG	-	chr1.2:80497916-80497935	MS.gene92970:intron	40.0%
	TTTGAGGAAATGGGTGCTAA+AGG	+	chr1.2:80497917-80497936	None:intergenic	40.0%
!	AACAAGTAACTAGAAGGCAC+AGG	+	chr1.2:80498016-80498035	None:intergenic	40.0%
!	ACAAGGTATCTAGTGTGATG+AGG	-	chr1.2:80499481-80499500	MS.gene92970:intron	40.0%
!	ACACCTACTACAGGTTTTTG+TGG	-	chr1.2:80498357-80498376	MS.gene92970:intron	40.0%
!	AGGCTTAACCTTTGAGGAAA+TGG	+	chr1.2:80497927-80497946	None:intergenic	40.0%
!	CCCCTGTTTTGTATATTGGT+CGG	-	chr1.2:80497424-80497443	MS.gene92970:intron	40.0%
!	CTATGTCTAATTGCTGTTGC+AGG	-	chr1.2:80499761-80499780	MS.gene92970:CDS	40.0%
!	GAAAGCATAACCAACCTAGA+AGG	+	chr1.2:80498717-80498736	None:intergenic	40.0%
!	GCTTTTTGAACACCTACTAC+AGG	-	chr1.2:80498348-80498367	MS.gene92970:intron	40.0%
!	GGCTTAACCTTTGAGGAAAT+GGG	+	chr1.2:80497926-80497945	None:intergenic	40.0%
!!	TTATCTTCTTTGGAGCAGAC+TGG	+	chr1.2:80499797-80499816	None:intergenic	40.0%
!!!	GGGGGATTTTCTAGAATCAT+AGG	-	chr1.2:80498581-80498600	MS.gene92970:intron	40.0%
!!!	TGAGCATGCTGCTGATTTTT+TGG	-	chr1.2:80497259-80497278	MS.gene92970:intron	40.0%
!!!	TTGCTCTTTTTCAGGCATGT+GGG	+	chr1.2:80498890-80498909	None:intergenic	40.0%
!!!	TTTGCTCTTTTTCAGGCATG+TGG	+	chr1.2:80498891-80498910	None:intergenic	40.0%
	AAATCAGCAGCATGCTCAGA+TGG	+	chr1.2:80497257-80497276	None:intergenic	45.0%
	ACAGGGGAAGAATTCTCCAA+TGG	+	chr1.2:80497411-80497430	None:intergenic	45.0%
	AGGATCAACAATCCTTGGGT+GGG	-	chr1.2:80498560-80498579	MS.gene92970:intron	45.0%
	CATGTCGCTCTCGTTCAATT+TGG	+	chr1.2:80499461-80499480	None:intergenic	45.0%
	CGTAAAAAGATAGAGGCTGC+TGG	-	chr1.2:80499643-80499662	MS.gene92970:intron	45.0%
	TCCACATGGCTTCTATGAGA+AGG	-	chr1.2:80497449-80497468	MS.gene92970:intron	45.0%
	TCCTTCTCATAGAAGCCATG+TGG	+	chr1.2:80497453-80497472	None:intergenic	45.0%
	TGGCTTCTATGAGAAGGAGA+TGG	-	chr1.2:80497455-80497474	MS.gene92970:intron	45.0%
	TTGACAGTATCATCACGCTG+TGG	+	chr1.2:80498676-80498695	None:intergenic	45.0%
!	CGAGAGCTTTGCTCTTTTTC+AGG	+	chr1.2:80498898-80498917	None:intergenic	45.0%
!	GTCTAATTGCTGTTGCAGGT+GGG	-	chr1.2:80499765-80499784	MS.gene92970:CDS	45.0%
!	TGTCTAATTGCTGTTGCAGG+TGG	-	chr1.2:80499764-80499783	MS.gene92970:CDS	45.0%
!	TTTCAGGCATGTGGGGTATT+TGG	+	chr1.2:80498882-80498901	None:intergenic	45.0%
!!	ATTTTGGTGTAGCCGTTGGA+AGG	-	chr1.2:80497354-80497373	MS.gene92970:CDS	45.0%
!!	CTTGATTTTGGTGTAGCCGT+TGG	-	chr1.2:80497350-80497369	MS.gene92970:CDS	45.0%
!!	GTCGGTTTTCTTAAGGCCTA+AGG	-	chr1.2:80499191-80499210	MS.gene92970:intron	45.0%
!!!	TGCTCTTTTTCAGGCATGTG+GGG	+	chr1.2:80498889-80498908	None:intergenic	45.0%
!!!	AGAATTATTTTTAATTTTTT+TGG	-	chr1.2:80499291-80499310	MS.gene92970:intron	5.0%
	AGTTCAGGAAGTTTGCGACC+AGG	+	chr1.2:80497384-80497403	None:intergenic	50.0%
	ATCAACAATCCTTGGGTGGG+GGG	-	chr1.2:80498563-80498582	MS.gene92970:intron	50.0%
	CAATTACCGCTACAAGCCCT+TGG	-	chr1.2:80499428-80499447	MS.gene92970:intron	50.0%
	GAGGATCAACAATCCTTGGG+TGG	-	chr1.2:80498559-80498578	MS.gene92970:intron	50.0%
	GATCAACAATCCTTGGGTGG+GGG	-	chr1.2:80498562-80498581	MS.gene92970:intron	50.0%
	GGATCAACAATCCTTGGGTG+GGG	-	chr1.2:80498561-80498580	MS.gene92970:intron	50.0%
	TAGTGTCCAAGGGCTTGTAG+CGG	+	chr1.2:80499437-80499456	None:intergenic	50.0%
	TGAACGAGAGCGACATGACA+AGG	-	chr1.2:80499464-80499483	MS.gene92970:intron	50.0%
!!	TCTTCTTTGGAGCAGACTGG+AGG	+	chr1.2:80499794-80499813	None:intergenic	50.0%
	CTAGAAAATCCCCCCACCCA+AGG	+	chr1.2:80498575-80498594	None:intergenic	55.0%
	GATTGTGGGGCCTTCTAGGT+TGG	-	chr1.2:80498704-80498723	MS.gene92970:intron	55.0%
	GTAGGATTGTGGGGCCTTCT+AGG	-	chr1.2:80498700-80498719	MS.gene92970:intron	55.0%
	TTGGTGTAGCCGTTGGAAGG+TGG	-	chr1.2:80497357-80497376	MS.gene92970:CDS	55.0%
	CGACCAGGACCACCTTCCAA+CGG	+	chr1.2:80497369-80497388	None:intergenic	60.0%
	TAGCCGTTGGAAGGTGGTCC+TGG	-	chr1.2:80497363-80497382	MS.gene92970:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	80497185	80499830	80497185	ID=MS.gene92970
chr1.2	mRNA	80497185	80499830	80497185	ID=MS.gene92970.t1;Parent=MS.gene92970
chr1.2	exon	80499735	80499830	80499735	ID=MS.gene92970.t1.exon1;Parent=MS.gene92970.t1
chr1.2	CDS	80499735	80499830	80499735	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80499535	80499649	80499535	ID=MS.gene92970.t1.exon2;Parent=MS.gene92970.t1
chr1.2	CDS	80499535	80499649	80499535	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80499365	80499420	80499365	ID=MS.gene92970.t1.exon3;Parent=MS.gene92970.t1
chr1.2	CDS	80499365	80499420	80499365	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80498799	80498846	80498799	ID=MS.gene92970.t1.exon4;Parent=MS.gene92970.t1
chr1.2	CDS	80498799	80498846	80498799	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80498608	80498705	80498608	ID=MS.gene92970.t1.exon5;Parent=MS.gene92970.t1
chr1.2	CDS	80498608	80498705	80498608	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80497530	80497599	80497530	ID=MS.gene92970.t1.exon6;Parent=MS.gene92970.t1
chr1.2	CDS	80497530	80497599	80497530	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80497325	80497435	80497325	ID=MS.gene92970.t1.exon7;Parent=MS.gene92970.t1
chr1.2	CDS	80497325	80497435	80497325	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1
chr1.2	exon	80497185	80497232	80497185	ID=MS.gene92970.t1.exon8;Parent=MS.gene92970.t1
chr1.2	CDS	80497185	80497232	80497185	ID=cds.MS.gene92970.t1;Parent=MS.gene92970.t1

Gene Sequence

>MS.gene92970

ATGGGGACGAAGGCAAAGAAAGTTATGAAGAAGAAGAGTTTGAAAAGGGTCAATGCTATTAACAATAAACCATCTGAGCATGCTGCTGATTTTTTGGTATGTTATTGTTCATAACACTTTTTCTCTCAATTTTTTGTTGTTGATGGTGTTTTTGATTATTTGTTGCTTGATTTTGGTGTAGCCGTTGGAAGGTGGTCCTGGTCGCAAACTTCCTGAACTTAAACCATTGGAGAATTCTTCCCCTGTTTTGTATATTGGTCGGATTCCACATGGCTTCTATGAGAAGGAGATGGAAGGTATCTGCTTATACTTTTAGATTATTTTTTTATCTTTATGTTTTCTTAATTTCTAGATTGTTATTTAATTTAACTTGAAAGAATATGTGTTTATGAATTAATTTGTTTATGCAGCTTATTTTGGACAATTTGGAACCATCAAGAGATTGAGAATTTCCAGAAATAAAAAGGTTAAGCTCTTATACTTCTTTTCGTCTTGCTTTGTTTGCTTAGACTTGTATCAACATGATGATGATGATTTGTGGCTTTGCTTTGTTTACTTTATCGAATTACTGTGTCATCCATTAGAACTATAATTTCGATGATAATTTTTCTAGAATGTTTCAGTCTAATGTATATTGGTTATCTTTTAATTTTAATAAATATTTTTGATGAACATTGCAAATTCTTCAAATTTGTTGTTAAGTAGTTCTCATGATACTTAGTTCTTCTGCCTTTAGCACCCATTTCCTCAAAGGTTAAGCCTTTGTGTATCAGGAATTCTATCGTTTTTATTTGGTTGGTTCTTGACTATTTTCTTTGATTTTTGACACCTGTGCCTTCTAGTTACTTGTTTTAGGTAGAATGCTCGATTTCAACAATATTTAGTTAGTTAACTACCTTCGATCTTCATTGATATATATTGCTCCTTTTTGATTAATATTGATAACACATTTTTTTTTTTTTTTTTTTTTTTTATGTTTAACAGACCGGAAAATCAAGACATTTTGGGTTCATAGAATTTGAATCTCCCGAGGTAAAATTTATTTTTCTGATTATTGTGTTGTGATTTTGATTTTTGGTGTATAAACTCTTGTTTGTGCTGATATTTTTTGGTTTTGTTTTGTAGGTAGCAAAAATTGTTGCCGATACTATGCACAATTATTTGCTTTTTGAACACCTACTACAGGTTTTTGTGGTACCTTCAGAACATGTTCATCCTAGAATGTAAGTTACTAATTAACTTGTTAATTCGTTATCCATATGTATTTTTGTTTAAGGCTTCGTAATTTGTTTGTTATATTCTCTTTTCTAGTTGTTTTTTTTTTTCTCTTATGTTGGAAGAGAGAGTTTATTATGAGAAAACAAGAAATTTTAAGAGGATCAACAATCCTTGGGTGGGGGGATTTTCTAGAATCATAGGAAAGGTAAATCAGCTCACAAACTTACCTATCCCTCAAAATATCAGATTAACATGATTATGGCTATGGTTCCACAGCGTGATGATACTGTCAAAGTTGTAGGATTGTGGGGCCTTCTAGGTTGGTTATGCTTTCATCCATCATGTTTATTTTGATCTCTTCCCCAAAATAAATTAGAGGCTTATGAAATAGATGAGGACACCATACCCAAATAGTAGTTAGGGAAACTATCATATCGTGCAATGTTCAGAAGGAAATGTCTAGCACTGCCTTTTAACCAAATACCCCACATGCCTGAAAAAGAGCAAAGCTCTCGAGCATTTTCCAACCTTGCGTTAAAATATAAGATGTAAGCTGACATATCTGGTAAGTCAGTTTGTTTGAAATCATGAAGGAAAATAGGGAAAGTGCAAGAGAAATTCCAATATAACACTATTTGTATTTGAATTAGCTGACTGAAAGCTGATACAGAAGCAACCGTTTGTTTAGAGATAAAAGGAACAGTGATTCGCTTTTGTGCACACCTGAAACTGTTTAATTATGTCAACGAAATAATCCTAGCCAGTTGAAGCACTTAAAGAAATCAGAAGTCGGTTTTCTTAAGGCCTAAGGCTATATAATGATGTACTGTACAGAAAACAATTATAAACCAACATATCAGTCATTTGAAAACAATAGAAGCATGTAGCAGAATTATTTTTAATTTTTTTGGAACTAATGGTATACTAAATGCCATGCCTGAGGTTAAATAATTTGTTTATTTTCTTAACATAATCAAGAAGAATAAATTAAAAGGTGGGATTTTTCTTTGTAGATGGAAAGGATTCAATTACCGCTACAAGCCCTTGGACACTATCCAAATTGAACGAGAGCGACATGACAAGGTATCTAGTGTGATGAGGAAGTATATCATTTGTATTTTGTTAGTCTGGTATTCTGTATAAAAAGAAAATGTACTAATTATTGTTATTATTTCAGGAAAGAACATTGGAAGAGCACAAAAAGTTGGTTGATAGAGTTATGAAACGTGACAAAAAGCGACGTAAAAAGATAGAGGCTGCTGGCATTGATTATGAGTGTCCCGAGATTGTGAGCTTTTTTTTGCCTTTCTTTGACTGATTAGTTGTTTTGATAGTCCATTTCTTGATCTTTTCTCATGCTATGTCTAATTGCTGTTGCAGGTGGGTAACCTCCAGTCTGCTCCAAAGAAGATAAAGTTCGAAGACTGA

Protein sequence

>MS.gene92970.t1

MGTKAKKVMKKKSLKRVNAINNKPSEHAADFLPLEGGPGRKLPELKPLENSSPVLYIGRIPHGFYEKEMEAYFGQFGTIKRLRISRNKKTGKSRHFGFIEFESPEVAKIVADTMHNYLLFEHLLQVFVVPSEHVHPRIWKGFNYRYKPLDTIQIERERHDKERTLEEHKKLVDRVMKRDKKRRKKIEAAGIDYECPEIVGNLQSAPKKIKFED