Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39336.t1 | RHN38812.1 | 89.9 | 534 | 54 | 0 | 1 | 534 | 1 | 534 | 5.40E-150 | 541.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39336.t1 | O80792 | 45.3 | 106 | 45 | 2 | 51 | 149 | 76 | 175 | 1.8e-16 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39336.t1 | A0A396GAR2 | 89.9 | 534 | 54 | 0 | 1 | 534 | 1 | 534 | 3.9e-150 | 541.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39336 | 0.834071 | 3.70E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene39336 | 0.846913 | 1.61E-59 | -1.69E-46 |
| MS.gene049233 | MS.gene39336 | 0.81763 | 2.98E-52 | -1.69E-46 |
| MS.gene049260 | MS.gene39336 | 0.827339 | 1.65E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene39336 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene39336 | 0.813576 | 2.39E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene39336 | 0.816713 | 4.80E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene39336 | 0.813832 | 2.10E-51 | -1.69E-46 |
| MS.gene049389 | MS.gene39336 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene39336 | 0.865141 | 7.32E-65 | -1.69E-46 |
| MS.gene049910 | MS.gene39336 | 0.832407 | 9.62E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene39336 | 0.801 | 1.11E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene39336 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene39336 | 0.802822 | 4.68E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene39336 | 0.855473 | 6.16E-62 | -1.69E-46 |
| MS.gene050227 | MS.gene39336 | 0.849155 | 3.88E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene39336 | 0.847034 | 1.49E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene39336 | 0.899545 | 1.78E-77 | -1.69E-46 |
| MS.gene050330 | MS.gene39336 | -0.826203 | 3.09E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene39336 | 0.854771 | 9.86E-62 | -1.69E-46 |
| MS.gene050560 | MS.gene39336 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene39336 | -0.801691 | 7.99E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene39336 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene39336 | 0.824979 | 6.02E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene39336 | 0.82713 | 1.85E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene39336 | 0.819026 | 1.44E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene39336 | 0.815743 | 7.91E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene39336 | 0.833886 | 4.12E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene39336 | 0.838544 | 2.70E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene39336 | 0.840072 | 1.08E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene39336 | 0.871358 | 7.26E-67 | -1.69E-46 |
| MS.gene051983 | MS.gene39336 | 0.860499 | 1.98E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene39336 | -0.841199 | 5.49E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene39336 | 0.822268 | 2.59E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene39336 | 0.871736 | 5.44E-67 | -1.69E-46 |
| MS.gene052207 | MS.gene39336 | 0.836578 | 8.62E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene39336 | 0.829173 | 5.97E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene39336 | 0.808053 | 3.74E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene39336 | 0.842476 | 2.53E-58 | -1.69E-46 |
| MS.gene05316 | MS.gene39336 | 0.814363 | 1.60E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene39336 | 0.802612 | 5.17E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene39336 | 0.811407 | 7.11E-51 | -1.69E-46 |
| MS.gene053559 | MS.gene39336 | 0.810642 | 1.04E-50 | -1.69E-46 |
| MS.gene053577 | MS.gene39336 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene39336 | 0.888644 | 4.92E-73 | -1.69E-46 |
| MS.gene053928 | MS.gene39336 | 0.84893 | 4.48E-60 | -1.69E-46 |
| MS.gene054010 | MS.gene39336 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene39336 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene39336 | 0.80615 | 9.46E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene39336 | 0.843854 | 1.08E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene39336 | 0.820601 | 6.29E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene39336 | 0.804783 | 1.83E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene39336 | 0.84603 | 2.81E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene39336 | 0.830641 | 2.62E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene39336 | 0.829383 | 5.31E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene39336 | 0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene39336 | 0.863532 | 2.33E-64 | -1.69E-46 |
| MS.gene054942 | MS.gene39336 | 0.841131 | 5.72E-58 | -1.69E-46 |
| MS.gene054983 | MS.gene39336 | 0.831528 | 1.59E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene39336 | 0.811507 | 6.76E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene39336 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene39336 | 0.843989 | 9.98E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene39336 | 0.856322 | 3.48E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene39336 | 0.847372 | 1.21E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene39336 | 0.856417 | 3.26E-62 | -1.69E-46 |
| MS.gene055604 | MS.gene39336 | 0.84213 | 3.12E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene39336 | 0.824036 | 1.00E-53 | -1.69E-46 |
| MS.gene055859 | MS.gene39336 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene39336 | 0.849063 | 4.11E-60 | -1.69E-46 |
| MS.gene056612 | MS.gene39336 | 0.832431 | 9.49E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene39336 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene39336 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene39336 | 0.831288 | 1.82E-55 | -1.69E-46 |
| MS.gene056902 | MS.gene39336 | 0.835207 | 1.92E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene39336 | 0.857024 | 2.16E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene39336 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene39336 | 0.879221 | 1.49E-69 | -1.69E-46 |
| MS.gene057245 | MS.gene39336 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene057439 | MS.gene39336 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene057448 | MS.gene39336 | 0.829893 | 3.99E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene39336 | 0.812445 | 4.22E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene39336 | 0.832702 | 8.13E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene39336 | 0.884751 | 1.47E-71 | -1.69E-46 |
| MS.gene057749 | MS.gene39336 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene39336 | 0.88503 | 1.16E-71 | -1.69E-46 |
| MS.gene05811 | MS.gene39336 | 0.895107 | 1.31E-75 | -1.69E-46 |
| MS.gene058142 | MS.gene39336 | 0.879236 | 1.47E-69 | -1.69E-46 |
| MS.gene058276 | MS.gene39336 | 0.827766 | 1.31E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene39336 | 0.806691 | 7.27E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene39336 | 0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene39336 | 0.823269 | 1.52E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene39336 | 0.81321 | 2.87E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene39336 | 0.821368 | 4.19E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene39336 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene39336 | 0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene39336 | 0.829516 | 4.93E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene39336 | 0.820901 | 5.37E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene39336 | 0.860531 | 1.94E-63 | -1.69E-46 |
| MS.gene058949 | MS.gene39336 | 0.832435 | 9.47E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene39336 | 0.885437 | 8.14E-72 | -1.69E-46 |
| MS.gene059128 | MS.gene39336 | 0.806655 | 7.40E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene39336 | 0.811888 | 5.59E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene39336 | 0.803485 | 3.41E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene39336 | 0.824275 | 8.82E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene39336 | 0.837645 | 4.60E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene39336 | 0.850942 | 1.22E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene39336 | 0.830906 | 2.26E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene39336 | 0.853484 | 2.32E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene39336 | 0.816225 | 6.17E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene39336 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene39336 | 0.819669 | 1.03E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene39336 | 0.876553 | 1.27E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene39336 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene059899 | MS.gene39336 | 0.837971 | 3.79E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene39336 | 0.819059 | 1.42E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene39336 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene39336 | 0.84344 | 1.40E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene39336 | 0.802348 | 5.86E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene39336 | 0.821746 | 3.43E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39336.t1 | MTR_0874s0010 | 94.156 | 154 | 9 | 0 | 381 | 534 | 1 | 154 | 6.05e-96 | 288 |
| MS.gene39336.t1 | MTR_8g097000 | 44.118 | 102 | 53 | 1 | 51 | 152 | 31 | 128 | 6.13e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39336.t1 | AT2G37920 | 80.282 | 142 | 28 | 0 | 43 | 184 | 42 | 183 | 1.81e-81 | 254 |
| MS.gene39336.t1 | AT2G07750 | 47.170 | 106 | 43 | 3 | 51 | 149 | 76 | 175 | 2.07e-19 | 92.8 |
| MS.gene39336.t1 | AT1G63250 | 47.000 | 100 | 52 | 1 | 51 | 149 | 26 | 125 | 8.72e-19 | 90.5 |
Find 180 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCTCCTTTGAATTA+TGG | 0.136407 | 8.2:+81367755 | MS.gene39336:CDS |
| TAAGAGTTGCTTGGCCTTCT+TGG | 0.154488 | 8.2:-81367342 | None:intergenic |
| ATTATTCTTCTTTGAATTCT+AGG | 0.168750 | 8.2:+81368218 | MS.gene39336:CDS |
| GAAGGCCAAGCAACTCTTAA+AGG | 0.203226 | 8.2:+81367346 | MS.gene39336:CDS |
| CTTCTTCTCCTTTGAATTAT+GGG | 0.214225 | 8.2:+81367756 | MS.gene39336:CDS |
| TTTATGTCAAAGGGTGTTAA+TGG | 0.247197 | 8.2:+81368490 | MS.gene39336:CDS |
| AGCCTGGTGGGTTTGACCTT+TGG | 0.261376 | 8.2:+81367534 | MS.gene39336:CDS |
| TGATGAGCAGCTCAAGGTTT+TGG | 0.278740 | 8.2:+81367496 | MS.gene39336:CDS |
| TTTATTCCAAAGGGTGTAGA+TGG | 0.302620 | 8.2:+81368295 | MS.gene39336:CDS |
| ATACTATGAACAACCCCTTT+AGG | 0.307915 | 8.2:-81367620 | None:intergenic |
| AGATTCCGAAGTTTATGATA+TGG | 0.326680 | 8.2:+81368645 | MS.gene39336:CDS |
| GATGGCAATTTCGGGAATAA+AGG | 0.329120 | 8.2:+81368373 | MS.gene39336:CDS |
| TGGAACTGATCGACATCTTC+TGG | 0.338243 | 8.2:-81368073 | None:intergenic |
| ATGGGAGTAGGTATTCATTA+GGG | 0.344079 | 8.2:+81368167 | MS.gene39336:CDS |
| AAGGGTGTTAATGGGTCTAA+TGG | 0.352119 | 8.2:+81368499 | MS.gene39336:CDS |
| GAATAATGATCTTCATTATC+TGG | 0.357045 | 8.2:-81368202 | None:intergenic |
| CTGCTAGGTACTTTCCTAAA+GGG | 0.358672 | 8.2:+81367606 | MS.gene39336:CDS |
| TGTCTGAGTTGGAGAGGCCT+TGG | 0.363814 | 8.2:+81367432 | MS.gene39336:CDS |
| CGTTCTTCTCATTTGAGTAC+TGG | 0.365356 | 8.2:+81367989 | MS.gene39336:CDS |
| AATGGGAGTAGGTATTCATT+AGG | 0.365746 | 8.2:+81368166 | MS.gene39336:CDS |
| TCCATTGCAGGCAGGAGATA+TGG | 0.367211 | 8.2:+81368571 | MS.gene39336:CDS |
| CTAGCAGAAGGCAACTCATC+AGG | 0.379311 | 8.2:-81367590 | None:intergenic |
| GTCTGAGTTGGAGAGGCCTT+GGG | 0.382992 | 8.2:+81367433 | MS.gene39336:CDS |
| TCACTAGTAACCTTCATATA+AGG | 0.389583 | 8.2:-81367647 | None:intergenic |
| GAGGAAGAGGGCTGAGCTTA+AGG | 0.397779 | 8.2:+81367403 | MS.gene39336:CDS |
| AGAGGGAGTAATTCCATTGC+AGG | 0.400461 | 8.2:+81368559 | MS.gene39336:CDS |
| GATTCCGAAGTTTATGATAT+GGG | 0.401573 | 8.2:+81368646 | MS.gene39336:CDS |
| GATGTTGTTCGGTCCCTTGA+TGG | 0.402228 | 8.2:+81367962 | MS.gene39336:CDS |
| CCAACGATGGTGATGCTGTT+AGG | 0.403084 | 8.2:+81368416 | MS.gene39336:CDS |
| ATGGCAATTTCGGGAATAAA+GGG | 0.411540 | 8.2:+81368374 | MS.gene39336:CDS |
| GCTTTGATAGAGAACAACTT+AGG | 0.416712 | 8.2:-81367473 | None:intergenic |
| GGCAGTCAATTGCAAAAGAA+TGG | 0.424682 | 8.2:+81367797 | MS.gene39336:CDS |
| GTTCTTCTCATTTGAGTACT+AGG | 0.424850 | 8.2:+81368107 | MS.gene39336:CDS |
| TTGGAAGATGGTGGCGGTGA+AGG | 0.425938 | 8.2:+81367695 | MS.gene39336:CDS |
| TGCCACTTGGACACCCCACC+TGG | 0.430845 | 8.2:-81367302 | None:intergenic |
| CTTAAAGGCGCGACTGTGCC+GGG | 0.433268 | 8.2:+81367361 | MS.gene39336:CDS |
| GCTGATAGGTTTCAGAAGCC+TGG | 0.437802 | 8.2:+81367518 | MS.gene39336:CDS |
| TGATGACTTGTTGGTGGAAC+CGG | 0.438809 | 8.2:+81367667 | MS.gene39336:CDS |
| TTATGTCAAAGGGTGTTAAT+GGG | 0.439277 | 8.2:+81368491 | MS.gene39336:CDS |
| GTTGGTGGAACCGGATGTTT+TGG | 0.441447 | 8.2:+81367676 | MS.gene39336:CDS |
| TTGAATGGCAGAACAAGAAC+AGG | 0.441966 | 8.2:+81367195 | MS.gene39336:CDS |
| ACCCCACCTGGATACGTCCT+TGG | 0.442899 | 8.2:-81367290 | None:intergenic |
| GTTGGAGAGGCCTTGGGAGG+TGG | 0.450649 | 8.2:+81367439 | MS.gene39336:CDS |
| TCCTTGGCCCACCACCCATT+CGG | 0.453379 | 8.2:-81367274 | None:intergenic |
| TCCGACCCATCTACACCCTT+TGG | 0.454564 | 8.2:-81368301 | None:intergenic |
| CTTTGATAGAGAACAACTTA+GGG | 0.454597 | 8.2:-81367472 | None:intergenic |
| AGGGTGTTAATGGGTCTAAT+GGG | 0.454713 | 8.2:+81368500 | MS.gene39336:CDS |
| TCTTAAAGGCGCGACTGTGC+CGG | 0.457990 | 8.2:+81367360 | MS.gene39336:CDS |
| ATGGTGGCGGTGAAGGGTAT+TGG | 0.462116 | 8.2:+81367702 | MS.gene39336:CDS |
| TCTGCTAGGTACTTTCCTAA+AGG | 0.464717 | 8.2:+81367605 | MS.gene39336:CDS |
| GGTGGGCCAAGGACGTATCC+AGG | 0.467611 | 8.2:+81367284 | MS.gene39336:CDS |
| GCTGTTAGGTCTAATGAATC+TGG | 0.468651 | 8.2:+81368430 | MS.gene39336:CDS |
| TCTTTGAATTCTAGGAGGAA+TGG | 0.471020 | 8.2:+81368226 | MS.gene39336:CDS |
| TTTCATATATTTGCCGCTCC+CGG | 0.471772 | 8.2:-81367379 | None:intergenic |
| TCTCCTTCACATGCGAGGAA+TGG | 0.479275 | 8.2:+81368340 | MS.gene39336:CDS |
| CGTTCAACTGTGATCCGAAT+GGG | 0.479445 | 8.2:+81367260 | MS.gene39336:CDS |
| TTCTCCTTTGAATTATGGGA+GGG | 0.482281 | 8.2:+81367760 | MS.gene39336:CDS |
| GGAAGGAAGTTTATTCCAAA+GGG | 0.482831 | 8.2:+81368286 | MS.gene39336:CDS |
| TATGCAGGAAGAGATGCTTC+TGG | 0.484105 | 8.2:+81368526 | MS.gene39336:CDS |
| TCCGAATGGGTGGTGGGCCA+AGG | 0.486021 | 8.2:+81367273 | MS.gene39336:CDS |
| TCGCGCCTTTAAGAGTTGCT+TGG | 0.492554 | 8.2:-81367351 | None:intergenic |
| CATACGCTTCCATTGCCACT+TGG | 0.496238 | 8.2:-81367315 | None:intergenic |
| GGCTTCTCAACCACCTCCCA+AGG | 0.496571 | 8.2:-81367449 | None:intergenic |
| CGTGGTGGATTGAGAAAGAA+TGG | 0.497408 | 8.2:+81368148 | MS.gene39336:CDS |
| GTTCTTCTCATTTGAGTACT+GGG | 0.500842 | 8.2:+81367990 | MS.gene39336:CDS |
| AGGCGCGACTGTGCCGGGAG+CGG | 0.501425 | 8.2:+81367366 | MS.gene39336:CDS |
| GACCTTTGGACTGAAAATGA+TGG | 0.501676 | 8.2:+81367548 | MS.gene39336:CDS |
| TGGAAAGAGGTTTATGTCAA+AGG | 0.502932 | 8.2:+81368480 | MS.gene39336:CDS |
| TGGAAGATGGTGGCGGTGAA+GGG | 0.503158 | 8.2:+81367696 | MS.gene39336:CDS |
| GCAGTCAATTGCAAAAGAAT+GGG | 0.505020 | 8.2:+81367798 | MS.gene39336:CDS |
| TAGCAGAAGGCAACTCATCA+GGG | 0.507988 | 8.2:-81367589 | None:intergenic |
| TAGTATCAAGCCTTATATGA+AGG | 0.508811 | 8.2:+81367637 | MS.gene39336:CDS |
| CTTCTCCTTTGAATTATGGG+AGG | 0.510533 | 8.2:+81367759 | MS.gene39336:CDS |
| GGCCAAGGACGTATCCAGGT+GGG | 0.513034 | 8.2:+81367288 | MS.gene39336:CDS |
| GGTTACTAGTGATGACTTGT+TGG | 0.513129 | 8.2:+81367658 | MS.gene39336:CDS |
| GATATGGGTTTACAACAAGA+TGG | 0.513338 | 8.2:+81368661 | MS.gene39336:CDS |
| GAGAAGAACGCTCCCCATCA+TGG | 0.513359 | 8.2:-81367859 | None:intergenic |
| GGATTCAGAAAGAATGAAAG+TGG | 0.514070 | 8.2:+81368037 | MS.gene39336:CDS |
| GAGAAGAACGCTCCCCATCA+TGG | 0.514183 | 8.2:-81368093 | None:intergenic |
| TCGTTCAACTGTGATCCGAA+TGG | 0.514392 | 8.2:+81367259 | MS.gene39336:CDS |
| GGGTCTAATGGGATGTATGC+AGG | 0.514728 | 8.2:+81368511 | MS.gene39336:CDS |
| TCCATATCTCCTGCCTGCAA+TGG | 0.515308 | 8.2:-81368572 | None:intergenic |
| GTGGCAATGGAAGCGTATGC+AGG | 0.517535 | 8.2:+81367319 | MS.gene39336:CDS |
| TGCTAGGTACTTTCCTAAAG+GGG | 0.520755 | 8.2:+81367607 | MS.gene39336:CDS |
| AGAATGAGGAAGCACGGGAA+TGG | 0.520786 | 8.2:+81368265 | MS.gene39336:CDS |
| ATTCATTAGGGGATGTTGAT+CGG | 0.523054 | 8.2:+81368179 | MS.gene39336:CDS |
| GTGGGGTGTCCAAGTGGCAA+TGG | 0.524560 | 8.2:+81367306 | MS.gene39336:CDS |
| ATGTTGATCGGTCCCATGAT+GGG | 0.525367 | 8.2:+81367846 | MS.gene39336:CDS |
| ATTTGTCAGAGGATGTTGTT+CGG | 0.528186 | 8.2:+81367951 | MS.gene39336:CDS |
| CTGATGAGTTGCCTTCTGCT+AGG | 0.530521 | 8.2:+81367591 | MS.gene39336:CDS |
| ATGTCGATCAGTTCCATGAT+GGG | 0.532019 | 8.2:+81368080 | MS.gene39336:CDS |
| GGAAAGAGGTTTATGTCAAA+GGG | 0.535087 | 8.2:+81368481 | MS.gene39336:CDS |
| AATGTTGATCGGTCCCATGA+TGG | 0.535818 | 8.2:+81367845 | MS.gene39336:CDS |
| AGAAGAACGCTCCCCATCAT+GGG | 0.538589 | 8.2:-81367858 | None:intergenic |
| GAGAAGAACGCTCTCCATCA+AGG | 0.539033 | 8.2:-81367976 | None:intergenic |
| CCACCATCTTCCAAAACATC+CGG | 0.541453 | 8.2:-81367686 | None:intergenic |
| GATGTCGATCAGTTCCATGA+TGG | 0.542056 | 8.2:+81368079 | MS.gene39336:CDS |
| GATAGGTTTCAGAAGCCTGG+TGG | 0.543185 | 8.2:+81367521 | MS.gene39336:CDS |
| TGAGGAAGCACGGGAATGGA+AGG | 0.547129 | 8.2:+81368269 | MS.gene39336:CDS |
| TAAGGCTGCTGTGTCTGAGT+TGG | 0.547223 | 8.2:+81367421 | MS.gene39336:CDS |
| ATAGGTTTCAGAAGCCTGGT+GGG | 0.552605 | 8.2:+81367522 | MS.gene39336:CDS |
| GGGAGGGATGAAGTGAATGT+TGG | 0.555148 | 8.2:+81367776 | MS.gene39336:CDS |
| GGAGTAATTCCATTGCAGGC+AGG | 0.555506 | 8.2:+81368563 | MS.gene39336:CDS |
| TGCAAAAGAATGGGAATGGA+AGG | 0.556742 | 8.2:+81367807 | MS.gene39336:CDS |
| GCCAAGGACGTATCCAGGTG+GGG | 0.557287 | 8.2:+81367289 | MS.gene39336:CDS |
| ACTGTGATCCGAATGGGTGG+TGG | 0.557980 | 8.2:+81367266 | MS.gene39336:CDS |
| TGGAAGGAAGTTTATTCCAA+AGG | 0.560885 | 8.2:+81368285 | MS.gene39336:CDS |
| GGAGGAAGGACAGTGGAAAG+AGG | 0.564139 | 8.2:+81368467 | MS.gene39336:CDS |
| AAATATATGAAATGAGGAAG+AGG | 0.565243 | 8.2:+81367390 | MS.gene39336:CDS |
| GTCCAAAGGTCAAACCCACC+AGG | 0.565839 | 8.2:-81367536 | None:intergenic |
| ATGCTAGAATGAGGAAGCAC+GGG | 0.570036 | 8.2:+81368260 | MS.gene39336:CDS |
| CTGCTGTGTCTGAGTTGGAG+AGG | 0.570591 | 8.2:+81367426 | MS.gene39336:CDS |
| GCTCCATTCCTCGCATGTGA+AGG | 0.570651 | 8.2:-81368343 | None:intergenic |
| TAAACCCATATCATAAACTT+CGG | 0.571619 | 8.2:-81368650 | None:intergenic |
| TCCAAAGGGTGTAGATGGGT+CGG | 0.572590 | 8.2:+81368300 | MS.gene39336:CDS |
| CAATTGCAAAAGAATGGGAA+TGG | 0.574372 | 8.2:+81367803 | MS.gene39336:CDS |
| GATTGAGAAAGAATGGGAGT+AGG | 0.578988 | 8.2:+81368155 | MS.gene39336:CDS |
| GAATAAAGGGAGTGCAAGGA+GGG | 0.580424 | 8.2:+81368387 | MS.gene39336:CDS |
| GGGCCAAGGACGTATCCAGG+TGG | 0.582577 | 8.2:+81367287 | MS.gene39336:CDS |
| CAAATATTGATGCTAGAATG+AGG | 0.585058 | 8.2:+81368251 | MS.gene39336:CDS |
| TTATTCCAAAGGGTGTAGAT+GGG | 0.587028 | 8.2:+81368296 | MS.gene39336:CDS |
| TGATATTAGATCGAGGAGGA+AGG | 0.587125 | 8.2:+81368453 | MS.gene39336:CDS |
| CAAAGCTGATGAGCAGCTCA+AGG | 0.588229 | 8.2:+81367490 | MS.gene39336:CDS |
| GTTCTTCTCCTTCACATGCG+AGG | 0.590332 | 8.2:+81368335 | MS.gene39336:CDS |
| GAAGCGTATGCAGGCCAAGA+AGG | 0.590653 | 8.2:+81367328 | MS.gene39336:CDS |
| GATGTTGATGATTGTGAGGG+TGG | 0.591087 | 8.2:+81367731 | MS.gene39336:CDS |
| ATTCTTCTTTGAATTCTAGG+AGG | 0.595094 | 8.2:+81368221 | MS.gene39336:CDS |
| GATGCTAGAATGAGGAAGCA+CGG | 0.598567 | 8.2:+81368259 | MS.gene39336:CDS |
| TACTAGTGATGACTTGTTGG+TGG | 0.599018 | 8.2:+81367661 | MS.gene39336:CDS |
| CCTAACAGCATCACCATCGT+TGG | 0.599436 | 8.2:-81368416 | None:intergenic |
| TCATCCCTCCCATAATTCAA+AGG | 0.599683 | 8.2:-81367764 | None:intergenic |
| AAAAGAACGGGAATGGAAGG+AGG | 0.599763 | 8.2:+81367927 | MS.gene39336:CDS |
| AGAAGAACGCTCTCCATCAA+GGG | 0.602854 | 8.2:-81367975 | None:intergenic |
| AAGACCGAGTTGAATGTTCG+TGG | 0.604006 | 8.2:+81368130 | MS.gene39336:CDS |
| TTCAAACAATGCTTCACGAA+GGG | 0.605338 | 8.2:+81368612 | MS.gene39336:CDS |
| TGGAAGGAGGTATTTGTCAG+AGG | 0.606269 | 8.2:+81367940 | MS.gene39336:CDS |
| TGAGTTGGAGAGGCCTTGGG+AGG | 0.608070 | 8.2:+81367436 | MS.gene39336:CDS |
| CGGTGAAGGGTATTGGTCAG+AGG | 0.608666 | 8.2:+81367709 | MS.gene39336:CDS |
| ATGAGTGAATTGAATGTTCG+TGG | 0.610536 | 8.2:+81367896 | MS.gene39336:CDS |
| TCAGAAAGAATGAAAGTGGG+AGG | 0.610800 | 8.2:+81368041 | MS.gene39336:CDS |
| AATATATGAAATGAGGAAGA+GGG | 0.611111 | 8.2:+81367391 | MS.gene39336:CDS |
| TTAGGAAAGTACCTAGCAGA+AGG | 0.611161 | 8.2:-81367602 | None:intergenic |
| AGCGGCAAATATATGAAATG+AGG | 0.611343 | 8.2:+81367384 | MS.gene39336:CDS |
| CTGTGATCCGAATGGGTGGT+GGG | 0.612200 | 8.2:+81367267 | MS.gene39336:CDS |
| AGAGGATGTTGATGATTGTG+AGG | 0.615555 | 8.2:+81367727 | MS.gene39336:CDS |
| TGTTGATCGGTCCCATGATG+GGG | 0.620284 | 8.2:+81367847 | MS.gene39336:CDS |
| AGCAACCTGACTCTACAAGC+TGG | 0.620354 | 8.2:+81368707 | MS.gene39336:CDS |
| ATCACAGTTGAACGAGAAGG+TGG | 0.621729 | 8.2:-81367251 | None:intergenic |
| ATTTGTCAGATAATGTTGAT+CGG | 0.624654 | 8.2:+81367834 | MS.gene39336:CDS |
| GGAATAAAGGGAGTGCAAGG+AGG | 0.625678 | 8.2:+81368386 | MS.gene39336:CDS |
| GTGGTGGATTGAGAAAGAAT+GGG | 0.626874 | 8.2:+81368149 | MS.gene39336:CDS |
| CGGATCACAGTTGAACGAGA+AGG | 0.627012 | 8.2:-81367254 | None:intergenic |
| CAGGAATGTGCTGTCCCTCA+CGG | 0.627917 | 8.2:+81367214 | MS.gene39336:CDS |
| AAAAGAATGGGAATGGAAGG+AGG | 0.632027 | 8.2:+81367810 | MS.gene39336:CDS |
| ATCCAGGTGGGGTGTCCAAG+TGG | 0.634467 | 8.2:+81367300 | MS.gene39336:CDS |
| TTGATAGAGAACAACTTAGG+GGG | 0.634929 | 8.2:-81367470 | None:intergenic |
| TCGGGAATAAAGGGAGTGCA+AGG | 0.635659 | 8.2:+81368383 | MS.gene39336:CDS |
| ATGGAATTACTCCCTCTCTG+TGG | 0.636479 | 8.2:-81368553 | None:intergenic |
| TGGGAGTAGGTATTCATTAG+GGG | 0.639409 | 8.2:+81368168 | MS.gene39336:CDS |
| GATTCAGAAAGAATGAAAGT+GGG | 0.640798 | 8.2:+81368038 | MS.gene39336:CDS |
| AGAAGTGAACTGAATGTTCG+TGG | 0.644976 | 8.2:+81368013 | MS.gene39336:CDS |
| ACCGAGTTGAATGTTCGTGG+TGG | 0.650259 | 8.2:+81368133 | MS.gene39336:CDS |
| TGTCGATCAGTTCCATGATG+GGG | 0.663175 | 8.2:+81368081 | MS.gene39336:CDS |
| TCAACTGTGATCCGAATGGG+TGG | 0.663322 | 8.2:+81367263 | MS.gene39336:CDS |
| CTTCTGGCAAACCACAGAGA+GGG | 0.664375 | 8.2:+81368542 | MS.gene39336:CDS |
| AGCAGAAGGCAACTCATCAG+GGG | 0.664647 | 8.2:-81367588 | None:intergenic |
| TTTGATAGAGAACAACTTAG+GGG | 0.666749 | 8.2:-81367471 | None:intergenic |
| TCCACCACGAACATTCAACT+CGG | 0.667563 | 8.2:-81368134 | None:intergenic |
| AGTGAATTGAATGTTCGTGG+TGG | 0.669207 | 8.2:+81367899 | MS.gene39336:CDS |
| TGACAGTTGTTGTACCACGT+TGG | 0.678494 | 8.2:-81367144 | None:intergenic |
| AGATCGAGGAGGAAGGACAG+TGG | 0.678732 | 8.2:+81368460 | MS.gene39336:CDS |
| CTTCAAACAATGCTTCACGA+AGG | 0.679253 | 8.2:+81368611 | MS.gene39336:CDS |
| GAGGATGTTGATGATTGTGA+GGG | 0.685932 | 8.2:+81367728 | MS.gene39336:CDS |
| GATATGGAAAATATACTCAG+AGG | 0.693542 | 8.2:+81368587 | MS.gene39336:CDS |
| GCTTCTGGCAAACCACAGAG+AGG | 0.700235 | 8.2:+81368541 | MS.gene39336:CDS |
| AATCTGGTGATATTAGATCG+AGG | 0.719396 | 8.2:+81368446 | MS.gene39336:CDS |
| AGTGAACTGAATGTTCGTGG+TGG | 0.720003 | 8.2:+81368016 | MS.gene39336:CDS |
| TCAGGGGTTTGAAACAACTG+TGG | 0.722897 | 8.2:-81367572 | None:intergenic |
| GAATGTGTTATTCGCCAACG+TGG | 0.736711 | 8.2:+81367130 | MS.gene39336:CDS |
| CTGGTGATATTAGATCGAGG+AGG | 0.764359 | 8.2:+81368449 | MS.gene39336:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCTTCTTTGAATTCT+AGG | + | chr8.2:81368218-81368237 | MS.gene39336:CDS | 20.0% |
| !!! | AATCTTTATCAAGTTTTGAA+TGG | + | chr8.2:81367180-81367199 | MS.gene39336:CDS | 20.0% |
| ! | AAATATATGAAATGAGGAAG+AGG | + | chr8.2:81367390-81367409 | MS.gene39336:CDS | 25.0% |
| ! | AATATATGAAATGAGGAAGA+GGG | + | chr8.2:81367391-81367410 | MS.gene39336:CDS | 25.0% |
| ! | ATTTGTCAGATAATGTTGAT+CGG | + | chr8.2:81367834-81367853 | MS.gene39336:CDS | 25.0% |
| ! | GAATAATGATCTTCATTATC+TGG | - | chr8.2:81368205-81368224 | None:intergenic | 25.0% |
| ! | TAAACCCATATCATAAACTT+CGG | - | chr8.2:81368653-81368672 | None:intergenic | 25.0% |
| AGATTCCGAAGTTTATGATA+TGG | + | chr8.2:81368645-81368664 | MS.gene39336:CDS | 30.0% | |
| ATTCTTCTTTGAATTCTAGG+AGG | + | chr8.2:81368221-81368240 | MS.gene39336:CDS | 30.0% | |
| CAAATATTGATGCTAGAATG+AGG | + | chr8.2:81368251-81368270 | MS.gene39336:CDS | 30.0% | |
| CTTCTTCTCCTTTGAATTAT+GGG | + | chr8.2:81367756-81367775 | MS.gene39336:CDS | 30.0% | |
| CTTTGATAGAGAACAACTTA+GGG | - | chr8.2:81367475-81367494 | None:intergenic | 30.0% | |
| GATATGGAAAATATACTCAG+AGG | + | chr8.2:81368587-81368606 | MS.gene39336:CDS | 30.0% | |
| GATTCAGAAAGAATGAAAGT+GGG | + | chr8.2:81368038-81368057 | MS.gene39336:CDS | 30.0% | |
| GATTCCGAAGTTTATGATAT+GGG | + | chr8.2:81368646-81368665 | MS.gene39336:CDS | 30.0% | |
| TCACTAGTAACCTTCATATA+AGG | - | chr8.2:81367650-81367669 | None:intergenic | 30.0% | |
| TCTTCTTCTCCTTTGAATTA+TGG | + | chr8.2:81367755-81367774 | MS.gene39336:CDS | 30.0% | |
| TTTGATAGAGAACAACTTAG+GGG | - | chr8.2:81367474-81367493 | None:intergenic | 30.0% | |
| ! | TAGTATCAAGCCTTATATGA+AGG | + | chr8.2:81367637-81367656 | MS.gene39336:CDS | 30.0% |
| !! | TTATGTCAAAGGGTGTTAAT+GGG | + | chr8.2:81368491-81368510 | MS.gene39336:CDS | 30.0% |
| !! | TTTATGTCAAAGGGTGTTAA+TGG | + | chr8.2:81368490-81368509 | MS.gene39336:CDS | 30.0% |
| AATCTGGTGATATTAGATCG+AGG | + | chr8.2:81368446-81368465 | MS.gene39336:CDS | 35.0% | |
| AATGGGAGTAGGTATTCATT+AGG | + | chr8.2:81368166-81368185 | MS.gene39336:CDS | 35.0% | |
| AGCGGCAAATATATGAAATG+AGG | + | chr8.2:81367384-81367403 | MS.gene39336:CDS | 35.0% | |
| ATACTATGAACAACCCCTTT+AGG | - | chr8.2:81367623-81367642 | None:intergenic | 35.0% | |
| ATGAGTGAATTGAATGTTCG+TGG | + | chr8.2:81367896-81367915 | MS.gene39336:CDS | 35.0% | |
| ATGGCAATTTCGGGAATAAA+GGG | + | chr8.2:81368374-81368393 | MS.gene39336:CDS | 35.0% | |
| ATGGGAGTAGGTATTCATTA+GGG | + | chr8.2:81368167-81368186 | MS.gene39336:CDS | 35.0% | |
| ATTCATTAGGGGATGTTGAT+CGG | + | chr8.2:81368179-81368198 | MS.gene39336:CDS | 35.0% | |
| ATTTGTCAGAGGATGTTGTT+CGG | + | chr8.2:81367951-81367970 | MS.gene39336:CDS | 35.0% | |
| CAATTGCAAAAGAATGGGAA+TGG | + | chr8.2:81367803-81367822 | MS.gene39336:CDS | 35.0% | |
| GATATGGGTTTACAACAAGA+TGG | + | chr8.2:81368661-81368680 | MS.gene39336:CDS | 35.0% | |
| GCAGTCAATTGCAAAAGAAT+GGG | + | chr8.2:81367798-81367817 | MS.gene39336:CDS | 35.0% | |
| GCTTTGATAGAGAACAACTT+AGG | - | chr8.2:81367476-81367495 | None:intergenic | 35.0% | |
| GGAAAGAGGTTTATGTCAAA+GGG | + | chr8.2:81368481-81368500 | MS.gene39336:CDS | 35.0% | |
| GGAAGGAAGTTTATTCCAAA+GGG | + | chr8.2:81368286-81368305 | MS.gene39336:CDS | 35.0% | |
| GGATTCAGAAAGAATGAAAG+TGG | + | chr8.2:81368037-81368056 | MS.gene39336:CDS | 35.0% | |
| GTTCTTCTCATTTGAGTACT+AGG | + | chr8.2:81367990-81368009 | MS.gene39336:CDS | 35.0% | |
| GTTCTTCTCATTTGAGTACT+GGG | + | chr8.2:81367990-81368009 | MS.gene39336:CDS | 35.0% | |
| TGGAAAGAGGTTTATGTCAA+AGG | + | chr8.2:81368480-81368499 | MS.gene39336:CDS | 35.0% | |
| TGGAAGGAAGTTTATTCCAA+AGG | + | chr8.2:81368285-81368304 | MS.gene39336:CDS | 35.0% | |
| TTCAAACAATGCTTCACGAA+GGG | + | chr8.2:81368612-81368631 | MS.gene39336:CDS | 35.0% | |
| TTCTCCTTTGAATTATGGGA+GGG | + | chr8.2:81367760-81367779 | MS.gene39336:CDS | 35.0% | |
| TTGATAGAGAACAACTTAGG+GGG | - | chr8.2:81367473-81367492 | None:intergenic | 35.0% | |
| ! | TCTTTGAATTCTAGGAGGAA+TGG | + | chr8.2:81368226-81368245 | MS.gene39336:CDS | 35.0% |
| ! | TTATTCCAAAGGGTGTAGAT+GGG | + | chr8.2:81368296-81368315 | MS.gene39336:CDS | 35.0% |
| ! | TTTATTCCAAAGGGTGTAGA+TGG | + | chr8.2:81368295-81368314 | MS.gene39336:CDS | 35.0% |
| AAAAGAATGGGAATGGAAGG+AGG | + | chr8.2:81367810-81367829 | MS.gene39336:CDS | 40.0% | |
| AGAAGTGAACTGAATGTTCG+TGG | + | chr8.2:81368013-81368032 | MS.gene39336:CDS | 40.0% | |
| AGTGAATTGAATGTTCGTGG+TGG | + | chr8.2:81367899-81367918 | MS.gene39336:CDS | 40.0% | |
| ATGTCGATCAGTTCCATGAT+GGG | + | chr8.2:81368080-81368099 | MS.gene39336:CDS | 40.0% | |
| CGTTCTTCTCATTTGAGTAC+TGG | + | chr8.2:81367989-81368008 | MS.gene39336:CDS | 40.0% | |
| CTGCTAGGTACTTTCCTAAA+GGG | + | chr8.2:81367606-81367625 | MS.gene39336:CDS | 40.0% | |
| CTTCAAACAATGCTTCACGA+AGG | + | chr8.2:81368611-81368630 | MS.gene39336:CDS | 40.0% | |
| CTTCTCCTTTGAATTATGGG+AGG | + | chr8.2:81367759-81367778 | MS.gene39336:CDS | 40.0% | |
| GACCTTTGGACTGAAAATGA+TGG | + | chr8.2:81367548-81367567 | MS.gene39336:CDS | 40.0% | |
| GATGGCAATTTCGGGAATAA+AGG | + | chr8.2:81368373-81368392 | MS.gene39336:CDS | 40.0% | |
| GATTGAGAAAGAATGGGAGT+AGG | + | chr8.2:81368155-81368174 | MS.gene39336:CDS | 40.0% | |
| GCTGTTAGGTCTAATGAATC+TGG | + | chr8.2:81368430-81368449 | MS.gene39336:CDS | 40.0% | |
| GGATTGAAAAAGAACGGGAA+TGG | + | chr8.2:81367920-81367939 | MS.gene39336:CDS | 40.0% | |
| GGCAGTCAATTGCAAAAGAA+TGG | + | chr8.2:81367797-81367816 | MS.gene39336:CDS | 40.0% | |
| TCAGAAAGAATGAAAGTGGG+AGG | + | chr8.2:81368041-81368060 | MS.gene39336:CDS | 40.0% | |
| TCATCCCTCCCATAATTCAA+AGG | - | chr8.2:81367767-81367786 | None:intergenic | 40.0% | |
| TCTGCTAGGTACTTTCCTAA+AGG | + | chr8.2:81367605-81367624 | MS.gene39336:CDS | 40.0% | |
| TGAAAAAGAACGGGAATGGA+AGG | + | chr8.2:81367924-81367943 | MS.gene39336:CDS | 40.0% | |
| TGATATTAGATCGAGGAGGA+AGG | + | chr8.2:81368453-81368472 | MS.gene39336:CDS | 40.0% | |
| TGCAAAAGAATGGGAATGGA+AGG | + | chr8.2:81367807-81367826 | MS.gene39336:CDS | 40.0% | |
| TGCTAGGTACTTTCCTAAAG+GGG | + | chr8.2:81367607-81367626 | MS.gene39336:CDS | 40.0% | |
| TGGGAGTAGGTATTCATTAG+GGG | + | chr8.2:81368168-81368187 | MS.gene39336:CDS | 40.0% | |
| TTGAATGGCAGAACAAGAAC+AGG | + | chr8.2:81367195-81367214 | MS.gene39336:CDS | 40.0% | |
| TTTCATATATTTGCCGCTCC+CGG | - | chr8.2:81367382-81367401 | None:intergenic | 40.0% | |
| ! | AGGGTGTTAATGGGTCTAAT+GGG | + | chr8.2:81368500-81368519 | MS.gene39336:CDS | 40.0% |
| ! | GGTTACTAGTGATGACTTGT+TGG | + | chr8.2:81367658-81367677 | MS.gene39336:CDS | 40.0% |
| ! | GTCCATCATTTTCAGTCCAA+AGG | - | chr8.2:81367553-81367572 | None:intergenic | 40.0% |
| !! | AAGGGTGTTAATGGGTCTAA+TGG | + | chr8.2:81368499-81368518 | MS.gene39336:CDS | 40.0% |
| !! | AGAGGATGTTGATGATTGTG+AGG | + | chr8.2:81367727-81367746 | MS.gene39336:CDS | 40.0% |
| !! | CGAGTTTTGATGGCAATTTC+GGG | + | chr8.2:81368365-81368384 | MS.gene39336:CDS | 40.0% |
| !! | CGTGGTGGATTGAAAAAGAA+CGG | + | chr8.2:81367914-81367933 | MS.gene39336:CDS | 40.0% |
| !! | GAGGATGTTGATGATTGTGA+GGG | + | chr8.2:81367728-81367747 | MS.gene39336:CDS | 40.0% |
| !! | GCGAGTTTTGATGGCAATTT+CGG | + | chr8.2:81368364-81368383 | MS.gene39336:CDS | 40.0% |
| !! | GTGGTGGATTGAAAAAGAAC+GGG | + | chr8.2:81367915-81367934 | MS.gene39336:CDS | 40.0% |
| !! | GTGGTGGATTGAGAAAGAAT+GGG | + | chr8.2:81368149-81368168 | MS.gene39336:CDS | 40.0% |
| !! | TACTAGTGATGACTTGTTGG+TGG | + | chr8.2:81367661-81367680 | MS.gene39336:CDS | 40.0% |
| !! | TTAGGAAAGTACCTAGCAGA+AGG | - | chr8.2:81367605-81367624 | None:intergenic | 40.0% |
| AAAAGAACGGGAATGGAAGG+AGG | + | chr8.2:81367927-81367946 | MS.gene39336:CDS | 45.0% | |
| AATGTTGATCGGTCCCATGA+TGG | + | chr8.2:81367845-81367864 | MS.gene39336:CDS | 45.0% | |
| AGAAGAACGCTCTCCATCAA+GGG | - | chr8.2:81367978-81367997 | None:intergenic | 45.0% | |
| AGAGGGAGTAATTCCATTGC+AGG | + | chr8.2:81368559-81368578 | MS.gene39336:CDS | 45.0% | |
| AGTGAACTGAATGTTCGTGG+TGG | + | chr8.2:81368016-81368035 | MS.gene39336:CDS | 45.0% | |
| ATAGGTTTCAGAAGCCTGGT+GGG | + | chr8.2:81367522-81367541 | MS.gene39336:CDS | 45.0% | |
| ATCACAGTTGAACGAGAAGG+TGG | - | chr8.2:81367254-81367273 | None:intergenic | 45.0% | |
| ATGGAATTACTCCCTCTCTG+TGG | - | chr8.2:81368556-81368575 | None:intergenic | 45.0% | |
| ATGTTGATCGGTCCCATGAT+GGG | + | chr8.2:81367846-81367865 | MS.gene39336:CDS | 45.0% | |
| CCACCATCTTCCAAAACATC+CGG | - | chr8.2:81367689-81367708 | None:intergenic | 45.0% | |
| CGTTCAACTGTGATCCGAAT+GGG | + | chr8.2:81367260-81367279 | MS.gene39336:CDS | 45.0% | |
| CTGGTGATATTAGATCGAGG+AGG | + | chr8.2:81368449-81368468 | MS.gene39336:CDS | 45.0% | |
| GAAGGCCAAGCAACTCTTAA+AGG | + | chr8.2:81367346-81367365 | MS.gene39336:CDS | 45.0% | |
| GATGCTAGAATGAGGAAGCA+CGG | + | chr8.2:81368259-81368278 | MS.gene39336:CDS | 45.0% | |
| GATGTCGATCAGTTCCATGA+TGG | + | chr8.2:81368079-81368098 | MS.gene39336:CDS | 45.0% | |
| TAGCAGAAGGCAACTCATCA+GGG | - | chr8.2:81367592-81367611 | None:intergenic | 45.0% | |
| TATGCAGGAAGAGATGCTTC+TGG | + | chr8.2:81368526-81368545 | MS.gene39336:CDS | 45.0% | |
| TCCACCACGAACATTCAACT+CGG | - | chr8.2:81368137-81368156 | None:intergenic | 45.0% | |
| TCGTTCAACTGTGATCCGAA+TGG | + | chr8.2:81367259-81367278 | MS.gene39336:CDS | 45.0% | |
| TGACAGTTGTTGTACCACGT+TGG | - | chr8.2:81367147-81367166 | None:intergenic | 45.0% | |
| TGGAACTGATCGACATCTTC+TGG | - | chr8.2:81368076-81368095 | None:intergenic | 45.0% | |
| TGTCGATCAGTTCCATGATG+GGG | + | chr8.2:81368081-81368100 | MS.gene39336:CDS | 45.0% | |
| ! | AAGACCGAGTTGAATGTTCG+TGG | + | chr8.2:81368130-81368149 | MS.gene39336:CDS | 45.0% |
| ! | ATGCTAGAATGAGGAAGCAC+GGG | + | chr8.2:81368260-81368279 | MS.gene39336:CDS | 45.0% |
| ! | GAATAAAGGGAGTGCAAGGA+GGG | + | chr8.2:81368387-81368406 | MS.gene39336:CDS | 45.0% |
| ! | GAATGTGTTATTCGCCAACG+TGG | + | chr8.2:81367130-81367149 | MS.gene39336:CDS | 45.0% |
| ! | TAAGAGTTGCTTGGCCTTCT+TGG | - | chr8.2:81367345-81367364 | None:intergenic | 45.0% |
| ! | TCAGGGGTTTGAAACAACTG+TGG | - | chr8.2:81367575-81367594 | None:intergenic | 45.0% |
| ! | TGATGAGCAGCTCAAGGTTT+TGG | + | chr8.2:81367496-81367515 | MS.gene39336:CDS | 45.0% |
| ! | TTTTGCTACAGTGACCGTGA+GGG | - | chr8.2:81367231-81367250 | None:intergenic | 45.0% |
| !! | AGGAATGGAGCGAGTTTTGA+TGG | + | chr8.2:81368355-81368374 | MS.gene39336:CDS | 45.0% |
| !! | AGGAGGGTTTTATCCAACGA+TGG | + | chr8.2:81368403-81368422 | MS.gene39336:CDS | 45.0% |
| !! | CGTGGTGGATTGAGAAAGAA+TGG | + | chr8.2:81368148-81368167 | MS.gene39336:CDS | 45.0% |
| !! | GATGTTGATGATTGTGAGGG+TGG | + | chr8.2:81367731-81367750 | MS.gene39336:CDS | 45.0% |
| !! | TGATGACTTGTTGGTGGAAC+CGG | + | chr8.2:81367667-81367686 | MS.gene39336:CDS | 45.0% |
| !! | TGGAAGGAGGTATTTGTCAG+AGG | + | chr8.2:81367823-81367842 | MS.gene39336:CDS | 45.0% |
| !!! | AGCTCAAGGTTTTGGCTGAT+AGG | + | chr8.2:81367504-81367523 | MS.gene39336:CDS | 45.0% |
| !!! | GAACCGGATGTTTTGGAAGA+TGG | + | chr8.2:81367683-81367702 | MS.gene39336:CDS | 45.0% |
| !!! | GATGTTTTGGAAGATGGTGG+CGG | + | chr8.2:81367689-81367708 | MS.gene39336:CDS | 45.0% |
| AGAAGAACGCTCCCCATCAT+GGG | - | chr8.2:81367861-81367880 | None:intergenic | 50.0% | |
| AGCAACCTGACTCTACAAGC+TGG | + | chr8.2:81368707-81368726 | MS.gene39336:CDS | 50.0% | |
| AGCAGAAGGCAACTCATCAG+GGG | - | chr8.2:81367591-81367610 | None:intergenic | 50.0% | |
| CAAAGCTGATGAGCAGCTCA+AGG | + | chr8.2:81367490-81367509 | MS.gene39336:CDS | 50.0% | |
| CATACGCTTCCATTGCCACT+TGG | - | chr8.2:81367318-81367337 | None:intergenic | 50.0% | |
| CCTAACAGCATCACCATCGT+TGG | - | chr8.2:81368419-81368438 | None:intergenic | 50.0% | |
| CGGATCACAGTTGAACGAGA+AGG | - | chr8.2:81367257-81367276 | None:intergenic | 50.0% | |
| CTAGCAGAAGGCAACTCATC+AGG | - | chr8.2:81367593-81367612 | None:intergenic | 50.0% | |
| CTGATGAGTTGCCTTCTGCT+AGG | + | chr8.2:81367591-81367610 | MS.gene39336:CDS | 50.0% | |
| CTTCTGGCAAACCACAGAGA+GGG | + | chr8.2:81368542-81368561 | MS.gene39336:CDS | 50.0% | |
| GAGAAGAACGCTCTCCATCA+AGG | - | chr8.2:81367979-81367998 | None:intergenic | 50.0% | |
| GATAGGTTTCAGAAGCCTGG+TGG | + | chr8.2:81367521-81367540 | MS.gene39336:CDS | 50.0% | |
| GATGTTGTTCGGTCCCTTGA+TGG | + | chr8.2:81367962-81367981 | MS.gene39336:CDS | 50.0% | |
| GCTGATAGGTTTCAGAAGCC+TGG | + | chr8.2:81367518-81367537 | MS.gene39336:CDS | 50.0% | |
| GGAGTAATTCCATTGCAGGC+AGG | + | chr8.2:81368563-81368582 | MS.gene39336:CDS | 50.0% | |
| GGGAGGGATGAAGTGAATGT+TGG | + | chr8.2:81367776-81367795 | MS.gene39336:CDS | 50.0% | |
| GGGTCTAATGGGATGTATGC+AGG | + | chr8.2:81368511-81368530 | MS.gene39336:CDS | 50.0% | |
| GTTCTTCTCCTTCACATGCG+AGG | + | chr8.2:81368335-81368354 | MS.gene39336:CDS | 50.0% | |
| TAAGGCTGCTGTGTCTGAGT+TGG | + | chr8.2:81367421-81367440 | MS.gene39336:CDS | 50.0% | |
| TCAACTGTGATCCGAATGGG+TGG | + | chr8.2:81367263-81367282 | MS.gene39336:CDS | 50.0% | |
| TCCATATCTCCTGCCTGCAA+TGG | - | chr8.2:81368575-81368594 | None:intergenic | 50.0% | |
| TCCATTGCAGGCAGGAGATA+TGG | + | chr8.2:81368571-81368590 | MS.gene39336:CDS | 50.0% | |
| TCTCCTTCACATGCGAGGAA+TGG | + | chr8.2:81368340-81368359 | MS.gene39336:CDS | 50.0% | |
| TGTTGATCGGTCCCATGATG+GGG | + | chr8.2:81367847-81367866 | MS.gene39336:CDS | 50.0% | |
| ! | ACCGAGTTGAATGTTCGTGG+TGG | + | chr8.2:81368133-81368152 | MS.gene39336:CDS | 50.0% |
| ! | AGAATGAGGAAGCACGGGAA+TGG | + | chr8.2:81368265-81368284 | MS.gene39336:CDS | 50.0% |
| ! | CCAACGATGGTGATGCTGTT+AGG | + | chr8.2:81368416-81368435 | MS.gene39336:CDS | 50.0% |
| ! | GGAATAAAGGGAGTGCAAGG+AGG | + | chr8.2:81368386-81368405 | MS.gene39336:CDS | 50.0% |
| ! | GTTTTGCTACAGTGACCGTG+AGG | - | chr8.2:81367232-81367251 | None:intergenic | 50.0% |
| ! | TCCAAAGGGTGTAGATGGGT+CGG | + | chr8.2:81368300-81368319 | MS.gene39336:CDS | 50.0% |
| ! | TCGCGCCTTTAAGAGTTGCT+TGG | - | chr8.2:81367354-81367373 | None:intergenic | 50.0% |
| ! | TCGGGAATAAAGGGAGTGCA+AGG | + | chr8.2:81368383-81368402 | MS.gene39336:CDS | 50.0% |
| !! | GTTGGTGGAACCGGATGTTT+TGG | + | chr8.2:81367676-81367695 | MS.gene39336:CDS | 50.0% |
| !!! | CCGGATGTTTTGGAAGATGG+TGG | + | chr8.2:81367686-81367705 | MS.gene39336:CDS | 50.0% |
| ACTGTGATCCGAATGGGTGG+TGG | + | chr8.2:81367266-81367285 | MS.gene39336:CDS | 55.0% | |
| AGATCGAGGAGGAAGGACAG+TGG | + | chr8.2:81368460-81368479 | MS.gene39336:CDS | 55.0% | |
| CAGGAATGTGCTGTCCCTCA+CGG | + | chr8.2:81367214-81367233 | MS.gene39336:CDS | 55.0% | |
| CTGTGATCCGAATGGGTGGT+GGG | + | chr8.2:81367267-81367286 | MS.gene39336:CDS | 55.0% | |
| GAAGCGTATGCAGGCCAAGA+AGG | + | chr8.2:81367328-81367347 | MS.gene39336:CDS | 55.0% | |
| GAGAAGAACGCTCCCCATCA+TGG | - | chr8.2:81367862-81367881 | None:intergenic | 55.0% | |
| GAGGAAGAGGGCTGAGCTTA+AGG | + | chr8.2:81367403-81367422 | MS.gene39336:CDS | 55.0% | |
| GCTCCATTCCTCGCATGTGA+AGG | - | chr8.2:81368346-81368365 | None:intergenic | 55.0% | |
| GCTTCTGGCAAACCACAGAG+AGG | + | chr8.2:81368541-81368560 | MS.gene39336:CDS | 55.0% | |
| GGAGGAAGGACAGTGGAAAG+AGG | + | chr8.2:81368467-81368486 | MS.gene39336:CDS | 55.0% | |
| GTCCAAAGGTCAAACCCACC+AGG | - | chr8.2:81367539-81367558 | None:intergenic | 55.0% | |
| TCCGACCCATCTACACCCTT+TGG | - | chr8.2:81368304-81368323 | None:intergenic | 55.0% | |
| ! | CTGCTGTGTCTGAGTTGGAG+AGG | + | chr8.2:81367426-81367445 | MS.gene39336:CDS | 55.0% |
| ! | GTCTGAGTTGGAGAGGCCTT+GGG | + | chr8.2:81367433-81367452 | MS.gene39336:CDS | 55.0% |
| ! | GTGGCAATGGAAGCGTATGC+AGG | + | chr8.2:81367319-81367338 | MS.gene39336:CDS | 55.0% |
| ! | TCTTAAAGGCGCGACTGTGC+CGG | + | chr8.2:81367360-81367379 | MS.gene39336:CDS | 55.0% |
| ! | TGAGGAAGCACGGGAATGGA+AGG | + | chr8.2:81368269-81368288 | MS.gene39336:CDS | 55.0% |
| ! | TGTCTGAGTTGGAGAGGCCT+TGG | + | chr8.2:81367432-81367451 | MS.gene39336:CDS | 55.0% |
| !! | AGCCTGGTGGGTTTGACCTT+TGG | + | chr8.2:81367534-81367553 | MS.gene39336:CDS | 55.0% |
| !! | ATGGTGGCGGTGAAGGGTAT+TGG | + | chr8.2:81367702-81367721 | MS.gene39336:CDS | 55.0% |
| !! | CGGTGAAGGGTATTGGTCAG+AGG | + | chr8.2:81367709-81367728 | MS.gene39336:CDS | 55.0% |
| !! | TGGAAGATGGTGGCGGTGAA+GGG | + | chr8.2:81367696-81367715 | MS.gene39336:CDS | 55.0% |
| !! | TTGGAAGATGGTGGCGGTGA+AGG | + | chr8.2:81367695-81367714 | MS.gene39336:CDS | 55.0% |
| ACCCCACCTGGATACGTCCT+TGG | - | chr8.2:81367293-81367312 | None:intergenic | 60.0% | |
| GCCAAGGACGTATCCAGGTG+GGG | + | chr8.2:81367289-81367308 | MS.gene39336:CDS | 60.0% | |
| GGCCAAGGACGTATCCAGGT+GGG | + | chr8.2:81367288-81367307 | MS.gene39336:CDS | 60.0% | |
| GGCTTCTCAACCACCTCCCA+AGG | - | chr8.2:81367452-81367471 | None:intergenic | 60.0% | |
| TCCTTGGCCCACCACCCATT+CGG | - | chr8.2:81367277-81367296 | None:intergenic | 60.0% | |
| ! | ATCCAGGTGGGGTGTCCAAG+TGG | + | chr8.2:81367300-81367319 | MS.gene39336:CDS | 60.0% |
| ! | CTTAAAGGCGCGACTGTGCC+GGG | + | chr8.2:81367361-81367380 | MS.gene39336:CDS | 60.0% |
| ! | GTGGGGTGTCCAAGTGGCAA+TGG | + | chr8.2:81367306-81367325 | MS.gene39336:CDS | 60.0% |
| ! | TGAGTTGGAGAGGCCTTGGG+AGG | + | chr8.2:81367436-81367455 | MS.gene39336:CDS | 60.0% |
| GGGCCAAGGACGTATCCAGG+TGG | + | chr8.2:81367287-81367306 | MS.gene39336:CDS | 65.0% | |
| GGTGGGCCAAGGACGTATCC+AGG | + | chr8.2:81367284-81367303 | MS.gene39336:CDS | 65.0% | |
| GTTGGAGAGGCCTTGGGAGG+TGG | + | chr8.2:81367439-81367458 | MS.gene39336:CDS | 65.0% | |
| ! | TGCCACTTGGACACCCCACC+TGG | - | chr8.2:81367305-81367324 | None:intergenic | 65.0% |
| !! | TCCGAATGGGTGGTGGGCCA+AGG | + | chr8.2:81367273-81367292 | MS.gene39336:CDS | 65.0% |
| AGGCGCGACTGTGCCGGGAG+CGG | + | chr8.2:81367366-81367385 | MS.gene39336:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81367128 | 81368732 | 81367128 | ID=MS.gene39336 |
| chr8.2 | mRNA | 81367128 | 81368732 | 81367128 | ID=MS.gene39336.t1;Parent=MS.gene39336 |
| chr8.2 | exon | 81367128 | 81368732 | 81367128 | ID=MS.gene39336.t1.exon1;Parent=MS.gene39336.t1 |
| chr8.2 | CDS | 81367128 | 81368732 | 81367128 | ID=cds.MS.gene39336.t1;Parent=MS.gene39336.t1 |
| Gene Sequence |
| Protein sequence |
