AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43202


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43202.t1 MTR_7g018610 97.876 1177 21 3 1 1173 1 1177 0.0 2300
MS.gene43202.t1 MTR_7g018610 97.706 1177 21 4 1 1173 1 1175 0.0 2291
MS.gene43202.t1 MTR_6g015285 37.879 1254 647 22 1 1173 1 1203 0.0 644
MS.gene43202.t1 MTR_6g015285 39.581 1099 568 16 1 1038 1 1064 0.0 630
MS.gene43202.t1 MTR_4g097580 31.148 793 505 10 44 811 48 824 1.69e-79 283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43202.t1 AT1G67230 45.234 1196 568 24 1 1173 1 1132 0.0 876
MS.gene43202.t1 AT1G13220 42.237 876 441 13 1 821 1 866 0.0 567
MS.gene43202.t1 AT1G13220 43.674 822 429 10 24 821 42 853 0.0 566
MS.gene43202.t1 AT1G68790 36.045 1143 602 23 44 1173 59 1085 1.77e-166 522
MS.gene43202.t1 AT5G65770 32.453 795 493 10 42 811 56 831 1.94e-82 291
MS.gene43202.t1 AT5G65770 32.453 795 493 10 42 811 56 831 1.94e-82 291
MS.gene43202.t1 AT5G65780 32.005 803 494 11 42 811 56 839 5.98e-79 281
MS.gene43202.t1 AT5G65770 31.630 822 491 12 42 811 56 858 7.69e-79 281
MS.gene43202.t1 AT1G13220 43.194 382 167 6 1 332 1 382 8.74e-76 256

Find 246 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTGATGTTGATAATTTA+AGG 0.105323 7.2:-78994302 MS.gene43202:CDS
CACGATTTGGGTGTGATTTC+GGG 0.141724 7.2:-78998768 MS.gene43202:CDS
GTAATATCACCAACCAATTT+TGG 0.165400 7.2:+78994480 None:intergenic
AGAAGAGTTGTTGAGAATTA+AGG 0.185276 7.2:-78995372 MS.gene43202:CDS
TGTTGAAAATGGTGGAAATT+TGG 0.229829 7.2:-78998724 MS.gene43202:CDS
GGTGCCTTCTCTTCCAAAAT+TGG 0.236620 7.2:-78994493 MS.gene43202:CDS
TCACGATTTGGGTGTGATTT+CGG 0.251207 7.2:-78998769 MS.gene43202:CDS
GCTCCTCTTGATTGAGAAAA+AGG 0.265758 7.2:-78997275 MS.gene43202:CDS
TGCTGTCCAGCCTTTGAATT+GGG 0.292145 7.2:+78994057 None:intergenic
TCTGCTGATTTCAGCAAGTT+TGG 0.292306 7.2:+78996769 None:intergenic
CTGCTGTCCAGCCTTTGAAT+TGG 0.294591 7.2:+78994056 None:intergenic
ATGTAAATCTGGATTCTTCT+AGG 0.298411 7.2:-78994443 MS.gene43202:CDS
TACCTTCTCATTTAGAGTTA+TGG 0.310383 7.2:+78996306 None:intergenic
AGGACAGGCGTTCCCTTCTA+AGG 0.317735 7.2:+78996693 None:intergenic
AAAGAGGCCGAAGCCTTTCT+TGG 0.325981 7.2:-78993970 MS.gene43202:CDS
AAATCATTTCTCCACAGTTC+TGG 0.341753 7.2:+78994568 None:intergenic
TTATGAGTACCAATTCAATA+TGG 0.343768 7.2:-78997299 MS.gene43202:CDS
AAATTTGGATCGTGAGGTTT+TGG 0.348861 7.2:-78998709 MS.gene43202:CDS
GCAGGAGTTTGAGATTGAAT+TGG 0.350661 7.2:-78995702 MS.gene43202:CDS
TTGCCCTGTTTGTCAATAGA+AGG 0.352754 7.2:+78994114 None:intergenic
GGGGACTTTGTATCAGTTGC+AGG 0.356364 7.2:+78994402 None:intergenic
GAAAGAGTTCAGAGATTGAT+AGG 0.360477 7.2:-78996748 MS.gene43202:CDS
CTCAGGAATCTGCCCTTAGA+AGG 0.363111 7.2:-78996706 MS.gene43202:CDS
AGGTACTGCCTCAGCAGCTT+TGG 0.363569 7.2:+78993942 None:intergenic
AGTGGGTCGGGTCACGATTT+GGG 0.363771 7.2:-78998780 MS.gene43202:CDS
GAGTGGGTCGGGTCACGATT+TGG 0.373382 7.2:-78998781 MS.gene43202:CDS
AGAGTCATTTGCTGCTGAAA+TGG 0.375118 7.2:-78995015 MS.gene43202:CDS
ATTTGCTGCTGAAATGGAAT+TGG 0.376060 7.2:-78995009 MS.gene43202:CDS
TTCCCCACTGATGTTTCACC+AGG 0.377440 7.2:+78992795 None:intergenic
TGAACCTTCTATTGACAAAC+AGG 0.379095 7.2:-78994118 MS.gene43202:CDS
CTCACTCAAAGCCCTGTTGT+TGG 0.379330 7.2:+78992941 None:intergenic
CATCAGTGGGGAAGAAGCTT+TGG 0.384117 7.2:-78992785 MS.gene43202:CDS
GATACAAAGTCCCCTGTTCC+TGG 0.388035 7.2:-78994393 MS.gene43202:CDS
AGATGGATTGAGGGATAGAT+TGG 0.390864 7.2:-78995657 MS.gene43202:CDS
TATGAGTACCAATTCAATAT+GGG 0.393717 7.2:-78997298 MS.gene43202:CDS
GAATCCTCAGCAATTCCATT+TGG 0.394656 7.2:+78993886 None:intergenic
AAAGGGAAAGGTGTTGAAAA+TGG 0.396303 7.2:-78998735 MS.gene43202:CDS
AGTTTCAAACCTTGAGAAAG+AGG 0.399946 7.2:-78998679 MS.gene43202:intron
TCAGTGCCAGGAACATTTGC+TGG 0.400507 7.2:+78994237 None:intergenic
TTCCTGGTGGAACTGTCTCT+TGG 0.402119 7.2:-78994377 MS.gene43202:CDS
ATCACATGACCTGGAATCTC+AGG 0.404024 7.2:-78996723 MS.gene43202:CDS
GGGCAGATTCCTGAGATTCC+AGG 0.404911 7.2:+78996714 None:intergenic
AAGAGGCCGAAGCCTTTCTT+GGG 0.407370 7.2:-78993969 MS.gene43202:CDS
AGAAGTGGCTAATAGAGAAA+TGG 0.409470 7.2:-78994796 MS.gene43202:CDS
CGAATTTGCGGAAGCGAAAC+CGG 0.410471 7.2:-78993816 MS.gene43202:CDS
TCTCAAAATCCAAAAGCAAT+TGG 0.412401 7.2:+78994946 None:intergenic
GATTTGCCAGCAAATGTTCC+TGG 0.414943 7.2:-78994243 MS.gene43202:CDS
GTTTGTCAATAGAAGGTTCA+TGG 0.415304 7.2:+78994121 None:intergenic
GGATTCCCCAAGAAAGGCTT+CGG 0.419227 7.2:+78993963 None:intergenic
GGAGGAGAAGGTTGCAAAAC+GGG 0.424735 7.2:-78995597 MS.gene43202:CDS
GGGTGGTTCTGATGTAAATC+TGG 0.425959 7.2:-78994454 MS.gene43202:CDS
AAAGCTGCTGAGGCAGTACC+TGG 0.426199 7.2:-78993940 MS.gene43202:CDS
GAGACAGTTCCACCAGGAAC+AGG 0.429518 7.2:+78994381 None:intergenic
CAAAGCCCTGTTGTTGGTTG+TGG 0.430245 7.2:+78992947 None:intergenic
AGCTTTGGATTCCCCAAGAA+AGG 0.435296 7.2:+78993957 None:intergenic
AAGAGACCTTCGAAAGAGAA+TGG 0.438310 7.2:-78995208 MS.gene43202:CDS
AGAGGAGCCCCATATTGAAT+TGG 0.438408 7.2:+78997290 None:intergenic
CCTTCTCTTCCAAAATTGGT+TGG 0.443220 7.2:-78994489 MS.gene43202:CDS
ATGATACCACAACCAACAAC+AGG 0.444094 7.2:-78992953 MS.gene43202:CDS
ATTGAGAATTCTTTGACCCT+TGG 0.444420 7.2:+78996468 None:intergenic
CAAGGTCCTTCTCTTTCTGC+CGG 0.444826 7.2:+78996407 None:intergenic
TATATCAGAATGTCCTTCAC+TGG 0.448958 7.2:+78993750 None:intergenic
TCATTGCCAGATTGTACCCT+TGG 0.449589 7.2:+78994165 None:intergenic
GTTTCACCGGCAGTTTGTGC+CGG 0.453390 7.2:+78993685 None:intergenic
TCAAAAGGCTGCTGCTCCTC+CGG 0.454168 7.2:-78993704 MS.gene43202:CDS
CTAAGCAAAGAGAGGACTTA+CGG 0.458343 7.2:-78996531 MS.gene43202:CDS
TAAGCAAAGAGAGGACTTAC+GGG 0.468534 7.2:-78996530 MS.gene43202:CDS
CGAGCTGAGTCAAGATATAG+TGG 0.470843 7.2:-78997233 MS.gene43202:CDS
AGAAGGCGAAGTCAGTCATA+TGG 0.470890 7.2:-78995618 MS.gene43202:CDS
CGAAGAAGAGAAGTTAAAGA+AGG 0.472293 7.2:-78995096 MS.gene43202:CDS
TGACCCGACCCACTCTTATT+CGG 0.472811 7.2:+78998789 None:intergenic
AGACTATTTACAGAGGGAGT+TGG 0.472916 7.2:-78995057 MS.gene43202:CDS
GCTCCTCCGGCACAAACTGC+CGG 0.480835 7.2:-78993691 MS.gene43202:CDS
ATCAAAGAAGTAAATTAGAG+AGG 0.484787 7.2:-78994761 MS.gene43202:CDS
GGCATCAGCAGAGCGTAACT+TGG 0.485348 7.2:+78996790 None:intergenic
TAACTTGAGATGATTGAATC+CGG 0.487203 7.2:+78993797 None:intergenic
TTGGGTGTGATTTCGGGTGA+AGG 0.488305 7.2:-78998762 MS.gene43202:CDS
AGTCAAAGTCAAAGCTTTGA+AGG 0.488491 7.2:-78995519 MS.gene43202:CDS
CAGCCTCCCAATTCAAAGGC+TGG 0.488988 7.2:-78994063 MS.gene43202:CDS
AGCAACACGCCGAATAAGAG+TGG 0.491392 7.2:-78998798 MS.gene43202:CDS
ACGCCGAATAAGAGTGGGTC+GGG 0.493724 7.2:-78998792 MS.gene43202:CDS
CTCGGCCTGCATCTTCTCCA+CGG 0.496136 7.2:+78992859 None:intergenic
TCTGCTTCATTCTCAGTGCC+AGG 0.496408 7.2:+78994225 None:intergenic
TGGTGGAAATTTGGATCGTG+AGG 0.496464 7.2:-78998715 MS.gene43202:CDS
TCAAATTGAAAGTGAGAGAG+AGG 0.498535 7.2:-78995444 MS.gene43202:CDS
ATGAGAATACTCTGCAATGA+AGG 0.499512 7.2:+78996673 None:intergenic
AGAGACCTTCGAAAGAGAAT+GGG 0.500478 7.2:-78995207 MS.gene43202:CDS
CAAATTATATCTTGTTTCAC+CGG 0.504465 7.2:+78993672 None:intergenic
GATGCTCCAAGGGTACAATC+TGG 0.504742 7.2:-78994171 MS.gene43202:CDS
GAAGTTAAAGAAGGAGAAGC+AGG 0.504767 7.2:-78995087 MS.gene43202:CDS
AGTTTGTGTGCGCTTCACTC+TGG 0.505186 7.2:+78994008 None:intergenic
TATGCTGTCCTCATTCTCAT+TGG 0.505205 7.2:+78993406 None:intergenic
GCAGAATCAGTTAGAGCAGA+AGG 0.506854 7.2:-78994895 MS.gene43202:CDS
AGAGAATCTACGGAAAGCCT+TGG 0.507101 7.2:-78997140 MS.gene43202:CDS
TGATTCTATGAGAATGAACT+TGG 0.507907 7.2:-78996189 MS.gene43202:CDS
AGATATCTTGAAAATCTTAG+AGG 0.509236 7.2:+78994341 None:intergenic
TCTGTTAGAGACGTGTCTGC+TGG 0.509888 7.2:-78993521 MS.gene43202:CDS
AACCTCGCAGAGGAGGGGTA+AGG 0.510103 7.2:-78994032 MS.gene43202:CDS
ACCCAAAAGGAGGCGTCAAA+AGG 0.512112 7.2:-78993719 MS.gene43202:CDS
GAGACAAAGGATAGAAATGC+AGG 0.514070 7.2:-78994700 MS.gene43202:CDS
CTCATCCCATTCTCTTTCGA+AGG 0.514494 7.2:+78995202 None:intergenic
AGAAGCGAGAAGAGAATCTA+CGG 0.516172 7.2:-78997150 MS.gene43202:CDS
TCATCTCAAGTTACTGCTAG+TGG 0.517945 7.2:-78993787 MS.gene43202:CDS
TATCAATTTCTTGAGAGAAG+TGG 0.520279 7.2:-78994811 MS.gene43202:CDS
ACAGAAAGAGCTGCTGATGA+AGG 0.520326 7.2:-78995255 MS.gene43202:CDS
TGGAGAAGAAAGACTGGCCA+AGG 0.520532 7.2:-78996485 MS.gene43202:CDS
CAGCAGAAACCTCGCAGAGG+AGG 0.522746 7.2:-78994039 MS.gene43202:CDS
AAGTCAAAGCTTTGAAGGAA+AGG 0.523077 7.2:-78995514 MS.gene43202:CDS
GAGAATCTACGGAAAGCCTT+GGG 0.523272 7.2:-78997139 MS.gene43202:CDS
AGCATGAAATTGATCAGTAC+AGG 0.524522 7.2:-78995280 MS.gene43202:CDS
TGTTTACGCCGCAGAGATTG+TGG 0.525245 7.2:-78998830 MS.gene43202:CDS
AGTCAAAGCTTTGAAGGAAA+GGG 0.526644 7.2:-78995513 MS.gene43202:CDS
TGCTGAGGATTCTGCCAACA+TGG 0.527102 7.2:-78993875 MS.gene43202:CDS
AGGATCATGACGCTGAGTAC+AGG 0.527292 7.2:-78992890 MS.gene43202:CDS
TGCTGACATTGAGAATATAG+AGG 0.528955 7.2:-78994514 MS.gene43202:CDS
AAGAGAGGACTTACGGGAGT+GGG 0.533479 7.2:-78996524 MS.gene43202:CDS
AGAAACAAACCTCTTTCTCA+AGG 0.534819 7.2:+78998670 None:intergenic
TGATTTGAAAAGAGCAGATG+TGG 0.537195 7.2:-78995177 MS.gene43202:CDS
GTGAAACAAGATATAATTTG+AGG 0.538936 7.2:-78993669 MS.gene43202:CDS
TCGGCCTGCATCTTCTCCAC+GGG 0.540067 7.2:+78992860 None:intergenic
GAAGAATGTGCTTCAACAGA+AGG 0.541498 7.2:-78995144 MS.gene43202:CDS
TCAAAGAAGTAAATTAGAGA+GGG 0.545878 7.2:-78994760 MS.gene43202:CDS
TGAATCGAGGAAGTTATTCG+AGG 0.547105 7.2:-78994859 MS.gene43202:CDS
GTTGGTCGTGCAAATGATGC+AGG 0.547233 7.2:-78993476 MS.gene43202:CDS
TGGAGGAGAAGGTTGCAAAA+CGG 0.548667 7.2:-78995598 MS.gene43202:CDS
TCACCGGCAGTTTGTGCCGG+AGG 0.549746 7.2:+78993688 None:intergenic
AGTGGCTAATAGAGAAATGG+AGG 0.550159 7.2:-78994793 MS.gene43202:CDS
TGCTCTTGATGTGAAGAAGC+AGG 0.551066 7.2:-78995720 MS.gene43202:CDS
AAAGAGAGGACTTACGGGAG+TGG 0.551953 7.2:-78996525 MS.gene43202:CDS
GGACAGCATAGACATTGATC+AGG 0.552465 7.2:-78993393 MS.gene43202:intron
TCATTTGTTTGCTCTATCTG+AGG 0.553618 7.2:-78997176 MS.gene43202:CDS
GAAGGACATTCTGATATACC+AGG 0.554133 7.2:-78993745 MS.gene43202:CDS
TACGCCGCAGAGATTGTGGT+CGG 0.554350 7.2:-78998826 MS.gene43202:CDS
GAGGGATAGATTGGTAGAAG+TGG 0.555534 7.2:-78995648 MS.gene43202:CDS
AAAGAAAGTGAGGGAGAGGT+TGG 0.556256 7.2:-78993494 MS.gene43202:CDS
CTGATGTTTCACCAGGGTGT+TGG 0.556472 7.2:+78992802 None:intergenic
ACCTCGCAGAGGAGGGGTAA+GGG 0.559557 7.2:-78994031 MS.gene43202:CDS
GTAGAAGTGGAAAAGAAAGA+AGG 0.560274 7.2:-78995635 MS.gene43202:CDS
TGTAAAAGCTGTTATCAAAG+AGG 0.560513 7.2:-78993986 MS.gene43202:CDS
GGGACTTTGTATCAGTTGCA+GGG 0.561590 7.2:+78994403 None:intergenic
AATACTCTGCAATGAAGGAC+AGG 0.561629 7.2:+78996678 None:intergenic
TGGGGAATCCAAAGCTGCTG+AGG 0.561772 7.2:-78993950 MS.gene43202:CDS
TGTTGATAATTTAAGGAGTG+TGG 0.561846 7.2:-78994295 MS.gene43202:CDS
CGGCAAAGAAAGTGAGGGAG+AGG 0.562852 7.2:-78993498 MS.gene43202:CDS
AAAAGACTTGGGGAAAGAGA+AGG 0.563118 7.2:-78995468 MS.gene43202:CDS
AGCAGAAACCTCGCAGAGGA+GGG 0.564586 7.2:-78994038 MS.gene43202:CDS
ATGATATTGACAAAATATGC+CGG 0.567449 7.2:-78996426 MS.gene43202:CDS
TGTCCAGCCTTTGAATTGGG+AGG 0.568976 7.2:+78994060 None:intergenic
TCAGAGGGAACAATTTATTG+TGG 0.569855 7.2:-78994634 MS.gene43202:CDS
GGAGTTGGAAACTCTTAAGC+TGG 0.570832 7.2:-78995042 MS.gene43202:CDS
GAACTTGGATCTCAAAGAGA+AGG 0.572626 7.2:-78996174 MS.gene43202:CDS
GCAGGATGGAGAAGAAAGAC+TGG 0.573855 7.2:-78996491 MS.gene43202:CDS
GGGAAAGGTGTTGAAAATGG+TGG 0.575849 7.2:-78998732 MS.gene43202:CDS
CATCTCAAGTTACTGCTAGT+GGG 0.576262 7.2:-78993786 MS.gene43202:CDS
GAATCCCGTGGAGAAGATGC+AGG 0.578649 7.2:-78992864 MS.gene43202:CDS
GAAAACATGTTGAGAGACAA+AGG 0.580461 7.2:-78994713 MS.gene43202:CDS
TCAAGATATAGTGGAAGTCA+AGG 0.580825 7.2:-78997224 MS.gene43202:CDS
AACCATAACTCTAAATGAGA+AGG 0.582109 7.2:-78996308 MS.gene43202:intron
AGTCAGTCATATGGAGGAGA+AGG 0.582966 7.2:-78995609 MS.gene43202:CDS
GAAGCTCAAGGAGAAAGAGA+AGG 0.583188 7.2:-78995549 MS.gene43202:CDS
TGATAGGAAATCACATGACC+TGG 0.584702 7.2:-78996732 MS.gene43202:CDS
ATTTCGGGTGAAGGTTCGAA+AGG 0.585429 7.2:-78998753 MS.gene43202:CDS
GGCAGTACCTGGGGAATCTG+TGG 0.585573 7.2:-78993929 MS.gene43202:CDS
CGGCATTACCAATGAGAATG+AGG 0.586526 7.2:-78993414 MS.gene43202:CDS
ATTGGTTGGTGATATTACAC+AGG 0.587007 7.2:-78994475 MS.gene43202:CDS
GAGTTATGGTTGCAAGCCTG+CGG 0.588211 7.2:+78996320 None:intergenic
AGCTGCTGAGGCAGTACCTG+GGG 0.588585 7.2:-78993938 MS.gene43202:CDS
CTGACTTTCAGAATCCATGT+TGG 0.589632 7.2:+78993861 None:intergenic
ATGAGTACCAATTCAATATG+GGG 0.590969 7.2:-78997297 MS.gene43202:CDS
ATATACCAGGGAGACCCAAA+AGG 0.593016 7.2:-78993732 MS.gene43202:CDS
TTTACAGCCTCCCAATTCAA+AGG 0.593274 7.2:-78994067 MS.gene43202:CDS
GAACGGAACGGCAGAAGACG+TGG 0.593320 7.2:-78992913 MS.gene43202:CDS
TCAGGAATCTGCCCTTAGAA+GGG 0.594482 7.2:-78996705 MS.gene43202:CDS
AGAGAAGGAGTTATCTGCAT+GGG 0.595016 7.2:-78996159 MS.gene43202:CDS
TGCTGGCGGCAAAGAAAGTG+AGG 0.595064 7.2:-78993504 MS.gene43202:CDS
CGCAGAGATTGTGGTCGGGT+CGG 0.596230 7.2:-78998821 MS.gene43202:CDS
ACGCCGCAGAGATTGTGGTC+GGG 0.596613 7.2:-78998825 MS.gene43202:CDS
GGACAGGCGTTCCCTTCTAA+GGG 0.597417 7.2:+78996694 None:intergenic
ACACTCTTTCTCAACACCCA+AGG 0.599622 7.2:+78997123 None:intergenic
CGATCATCCACAGATTCCCC+AGG 0.600197 7.2:+78993922 None:intergenic
TCCCCACTGATGTTTCACCA+GGG 0.600929 7.2:+78992796 None:intergenic
CACCCTGGTGAAACATCAGT+GGG 0.600985 7.2:-78992798 MS.gene43202:CDS
CCTCTGTAAATAGTCTTCTG+TGG 0.604444 7.2:+78995064 None:intergenic
TTCAAGTGACTGAGGAGGAG+AGG 0.608445 7.2:-78995334 MS.gene43202:CDS
ATATCAGAATGTCCTTCACT+GGG 0.610474 7.2:+78993751 None:intergenic
GGACTTTGTATCAGTTGCAG+GGG 0.610592 7.2:+78994404 None:intergenic
AGACAGTTCCACCAGGAACA+GGG 0.610781 7.2:+78994382 None:intergenic
GCAGAAACCTCGCAGAGGAG+GGG 0.611342 7.2:-78994037 MS.gene43202:CDS
CCTTCTCATTCACATTCAGT+CGG 0.613350 7.2:-78993434 MS.gene43202:CDS
AAAGACTTGGGGAAAGAGAA+GGG 0.614927 7.2:-78995467 MS.gene43202:CDS
GGAGAAGTCTCTAAAGTCTG+AGG 0.615604 7.2:-78995492 MS.gene43202:CDS
TGGGAGAAGAAACTGCAGGA+TGG 0.615865 7.2:-78996505 MS.gene43202:CDS
AAAGAGAGCAGAGAAGCTCA+AGG 0.616731 7.2:-78995561 MS.gene43202:CDS
GCCCTTACCCCTCCTCTGCG+AGG 0.617154 7.2:+78994030 None:intergenic
CACAGAAGACTATTTACAGA+GGG 0.618469 7.2:-78995063 MS.gene43202:CDS
GAGTGAGGAGGTGAACGGAA+CGG 0.619144 7.2:-78992925 MS.gene43202:CDS
GAAAGAGAAGGACCTTGAAG+AGG 0.619562 7.2:-78996401 MS.gene43202:CDS
AAGAAGATGATGTAAACCGC+AGG 0.621584 7.2:-78996336 MS.gene43202:CDS
CAACAACAGGGCTTTGAGTG+AGG 0.621846 7.2:-78992940 MS.gene43202:CDS
GGTGAAGGTTCGAAAGGGAA+AGG 0.623390 7.2:-78998747 MS.gene43202:CDS
AAGCTGCTGAGGCAGTACCT+GGG 0.623754 7.2:-78993939 MS.gene43202:CDS
TACTTTGTCTAAGCAAAGAG+AGG 0.624461 7.2:-78996539 MS.gene43202:CDS
ACAAGAAGCTGAAAAGTCAG+AGG 0.625087 7.2:-78994650 MS.gene43202:CDS
GAAGGAGTTATCTGCATGGG+AGG 0.626936 7.2:-78996156 MS.gene43202:CDS
TGTGTGTCAACAGCTCGAGA+AGG 0.630124 7.2:-78996927 MS.gene43202:intron
AGCCAAGAGACAGTTCCACC+AGG 0.631412 7.2:+78994375 None:intergenic
CTTCAAAGTTGCCAGAACTG+TGG 0.635143 7.2:-78994579 MS.gene43202:CDS
GACAGTTCCACCAGGAACAG+GGG 0.636095 7.2:+78994383 None:intergenic
TTTCGGGTGAAGGTTCGAAA+GGG 0.639773 7.2:-78998752 MS.gene43202:CDS
CATGAAGATGATCCCAGTGA+AGG 0.640893 7.2:-78993763 MS.gene43202:CDS
ACACCCTGGTGAAACATCAG+TGG 0.644855 7.2:-78992799 MS.gene43202:CDS
TGAAGGAAGCTGATGACTTG+AGG 0.645209 7.2:-78995238 MS.gene43202:CDS
AGGCGAAGTCAGTCATATGG+AGG 0.648246 7.2:-78995615 MS.gene43202:CDS
GATTCTTCTAGGCAAAACAC+TGG 0.650413 7.2:-78994432 MS.gene43202:CDS
AAGAGAAGGAGTTATCTGCA+TGG 0.660294 7.2:-78996160 MS.gene43202:CDS
ACAAAGTCCCCTGTTCCTGG+TGG 0.660422 7.2:-78994390 MS.gene43202:CDS
TACCAGGGAGACCCAAAAGG+AGG 0.660471 7.2:-78993729 MS.gene43202:CDS
CAAGAAGCTGAAAAGTCAGA+GGG 0.661238 7.2:-78994649 MS.gene43202:CDS
CAACAGGGCTTTGAGTGAGG+AGG 0.662596 7.2:-78992937 MS.gene43202:CDS
GCAACACGCCGAATAAGAGT+GGG 0.662764 7.2:-78998797 MS.gene43202:CDS
TCGTCTTCAAGTGACTGAGG+AGG 0.663898 7.2:-78995339 MS.gene43202:CDS
CACGCCGAATAAGAGTGGGT+CGG 0.664235 7.2:-78998793 MS.gene43202:CDS
CCGACTGAATGTGAATGAGA+AGG 0.671274 7.2:+78993434 None:intergenic
ACAAAGGATAGAAATGCAGG+AGG 0.673597 7.2:-78994697 MS.gene43202:CDS
TTGGTTGGTGATATTACACA+GGG 0.673883 7.2:-78994474 MS.gene43202:CDS
TAATCGTCTTCAAGTGACTG+AGG 0.674329 7.2:-78995342 MS.gene43202:CDS
AATATGCCGGCAGAAAGAGA+AGG 0.681781 7.2:-78996413 MS.gene43202:CDS
AGAGGCCGAAGCCTTTCTTG+GGG 0.682821 7.2:-78993968 MS.gene43202:CDS
GGAGTGGGAGAAGAAACTGC+AGG 0.684810 7.2:-78996509 MS.gene43202:CDS
GCTGGCGGCAAAGAAAGTGA+GGG 0.686739 7.2:-78993503 MS.gene43202:CDS
GTTAGAGACGTGTCTGCTGG+CGG 0.688691 7.2:-78993518 MS.gene43202:CDS
GATGAAGATTACCAACACCC+TGG 0.689003 7.2:-78992813 MS.gene43202:CDS
TGATACCACAACCAACAACA+GGG 0.689866 7.2:-78992952 MS.gene43202:CDS
GTTGGTGATATTACACAGGG+TGG 0.690670 7.2:-78994471 MS.gene43202:CDS
AAGGACATTCTGATATACCA+GGG 0.691467 7.2:-78993744 MS.gene43202:CDS
GAGTACAGGAGTGAATCCCG+TGG 0.702405 7.2:-78992876 MS.gene43202:CDS
GCTTTGAGTGAGGAGGTGAA+CGG 0.702832 7.2:-78992930 MS.gene43202:CDS
GGAGAAGAAAGACTGGCCAA+GGG 0.705549 7.2:-78996484 MS.gene43202:CDS
GGACAGCAGAAACCTCGCAG+AGG 0.711606 7.2:-78994042 MS.gene43202:CDS
CCACAGAAGACTATTTACAG+AGG 0.714817 7.2:-78995064 MS.gene43202:CDS
CGGAACGGCAGAAGACGTGG+AGG 0.721254 7.2:-78992910 MS.gene43202:CDS
GAACCTTCTATTGACAAACA+GGG 0.739896 7.2:-78994117 MS.gene43202:CDS
TCACATCAAGAGCAGCACTG+TGG 0.757468 7.2:+78995729 None:intergenic
ATCTGGCAATGATATCACAG+AGG 0.768401 7.2:-78994154 MS.gene43202:CDS
CGACCCGACCACAATCTCTG+CGG 0.777421 7.2:+78998822 None:intergenic
ACCCTGGTGAAACATCAGTG+GGG 0.794696 7.2:-78992797 MS.gene43202:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATCAAAAAATAAGA+AGG + chr7.2:78995504-78995523 None:intergenic 10.0%
!!! AAAATTTGATTTTAAAAACT+AGG + chr7.2:78993758-78993777 None:intergenic 10.0%
!!! ATTATTTTTTCTGTTAATTT+TGG - chr7.2:78995516-78995535 MS.gene43202:CDS 10.0%
!!! GTGTTTTTTTTTTTTTTTTT+TGG - chr7.2:78993710-78993729 MS.gene43202:CDS 10.0%
!! ATAATCTAAAAATGGAAAAA+TGG - chr7.2:78995663-78995682 MS.gene43202:CDS 15.0%
!!! AAAAAAATTCCTTTTGAATT+TGG - chr7.2:78993063-78993082 MS.gene43202:intron 15.0%
!!! CTTTTTGAATAATCTAAAAA+TGG - chr7.2:78995655-78995674 MS.gene43202:CDS 15.0%
!! AAAATGTTCAAAATTGAAAG+AGG + chr7.2:78994961-78994980 None:intergenic 20.0%
!! AATTCAAATTCTTAAACTGA+AGG + chr7.2:78998323-78998342 None:intergenic 20.0%
!! ATGATATATAACTGAAGTAA+AGG + chr7.2:78993829-78993848 None:intergenic 20.0%
!! CACATACAAAAACAATAAAA+CGG + chr7.2:78997985-78998004 None:intergenic 20.0%
!! GAAAAATTATAACTTATGCA+AGG + chr7.2:78994095-78994114 None:intergenic 20.0%
!! TTCAGTTTAAGAATTTGAAT+TGG - chr7.2:78998322-78998341 MS.gene43202:intron 20.0%
!!! AAAAGAAAATCTTTTGAAGA+TGG - chr7.2:78995924-78995943 MS.gene43202:intron 20.0%
!!! AATCTGATGTTGATAATTTA+AGG - chr7.2:78997296-78997315 MS.gene43202:CDS 20.0%
!!! ATCAGATTCAATCTTTTTAA+TGG + chr7.2:78997284-78997303 None:intergenic 20.0%
!!! ATTTATGGAATATTTTGACT+TGG - chr7.2:78993313-78993332 MS.gene43202:intron 20.0%
!!! ATTTTAATTTCCGTTTAGTT+TGG - chr7.2:78993773-78993792 MS.gene43202:CDS 20.0%
!!! TAGTGAACTTTGAAAATTTA+TGG - chr7.2:78993298-78993317 MS.gene43202:intron 20.0%
!!! TCAGATTCAATCTTTTTAAT+GGG + chr7.2:78997283-78997302 None:intergenic 20.0%
!!! TCTTCATTAGTTTTATCAAA+AGG + chr7.2:78997337-78997356 None:intergenic 20.0%
!!! TTCTAGTACTTTTTTCTTTA+TGG - chr7.2:78993544-78993563 MS.gene43202:intron 20.0%
!!! TTTAAGAATTTGAGAGATTT+TGG - chr7.2:78998542-78998561 MS.gene43202:intron 20.0%
!!! TTTATTTTTATTGATGAGAC+AGG - chr7.2:78995019-78995038 MS.gene43202:CDS 20.0%
! AAAAAGACTTATTTGAATCG+AGG - chr7.2:78996726-78996745 MS.gene43202:CDS 25.0%
! AAACAATAAAACGGAAATCA+AGG + chr7.2:78997976-78997995 None:intergenic 25.0%
! AACAATAAAACGGAAATCAA+GGG + chr7.2:78997975-78997994 None:intergenic 25.0%
! AGAAAGAATTCTTAAACTGA+AGG + chr7.2:78998470-78998489 None:intergenic 25.0%
! AGATATCTTGAAAATCTTAG+AGG + chr7.2:78997260-78997279 None:intergenic 25.0%
! ATAAAGACTATCCATAGATA+AGG + chr7.2:78994586-78994605 None:intergenic 25.0%
! ATCAAAGAAGTAAATTAGAG+AGG - chr7.2:78996837-78996856 MS.gene43202:CDS 25.0%
! ATGATATTGACAAAATATGC+CGG - chr7.2:78995172-78995191 MS.gene43202:CDS 25.0%
! CACACAAGTTTACAAATATT+AGG + chr7.2:78994657-78994676 None:intergenic 25.0%
! GATATGGACAAATTAAAATG+TGG + chr7.2:78995373-78995392 None:intergenic 25.0%
! GTGAAACAAGATATAATTTG+AGG - chr7.2:78997929-78997948 MS.gene43202:intron 25.0%
! TATGAGTACCAATTCAATAT+GGG - chr7.2:78994300-78994319 MS.gene43202:CDS 25.0%
! TCAAAGAAGTAAATTAGAGA+GGG - chr7.2:78996838-78996857 MS.gene43202:CDS 25.0%
! TTATGAGTACCAATTCAATA+TGG - chr7.2:78994299-78994318 MS.gene43202:CDS 25.0%
!! ATAAGAAAGTTTCCTGTTTT+GGG - chr7.2:78998406-78998425 MS.gene43202:intron 25.0%
!! CAAATTATATCTTGTTTCAC+CGG + chr7.2:78997929-78997948 None:intergenic 25.0%
!! CTTTGTAATTTGTATTCTCA+TGG - chr7.2:78994992-78995011 MS.gene43202:CDS 25.0%
!! GGATTAAACAAGATTTTAGA+GGG - chr7.2:78993731-78993750 MS.gene43202:CDS 25.0%
!! GTACACTCTTTTATGTTTAT+GGG - chr7.2:78993580-78993599 MS.gene43202:intron 25.0%
!! TACACTCTTTTATGTTTATG+GGG - chr7.2:78993581-78993600 MS.gene43202:intron 25.0%
!! TATAAGAAAGTTTCCTGTTT+TGG - chr7.2:78998405-78998424 MS.gene43202:intron 25.0%
!! TATCAGTGTTATTGAACATA+TGG - chr7.2:78993855-78993874 MS.gene43202:CDS 25.0%
!! TGATATAGTAGCTTTTCAAT+TGG - chr7.2:78998234-78998253 MS.gene43202:intron 25.0%
!! TGGATTAAACAAGATTTTAG+AGG - chr7.2:78993730-78993749 MS.gene43202:CDS 25.0%
!! TGTACACTCTTTTATGTTTA+TGG - chr7.2:78993579-78993598 MS.gene43202:intron 25.0%
!! TTTAGTCATTAATGTTGCTT+TGG - chr7.2:78993475-78993494 MS.gene43202:CDS 25.0%
!!! AATTTTGACGTTTTGTTGTA+CGG - chr7.2:78993956-78993975 MS.gene43202:CDS 25.0%
!!! GATTTTTTCATGATTGGTTT+TGG - chr7.2:78993645-78993664 MS.gene43202:intron 25.0%
!!! TCTTTTTGTTTAGTTGCTTT+AGG - chr7.2:78993365-78993384 MS.gene43202:intron 25.0%
!!! TTTCTGTTAATTTTGGAGAT+GGG - chr7.2:78995523-78995542 MS.gene43202:CDS 25.0%
!!! TTTGGGTTGTTAATAAGTTT+TGG - chr7.2:78998423-78998442 MS.gene43202:intron 25.0%
!!! TTTGGTGTGTTAATAAGTTT+TGG - chr7.2:78998560-78998579 MS.gene43202:intron 25.0%
!!! TTTTCTGTTAATTTTGGAGA+TGG - chr7.2:78995522-78995541 MS.gene43202:CDS 25.0%
AAAGATAACACATTGGACAT+TGG - chr7.2:78995620-78995639 MS.gene43202:CDS 30.0%
AAATCTTAAACTTCCCATGA+CGG + chr7.2:78993255-78993274 None:intergenic 30.0%
AACCATAACTCTAAATGAGA+AGG - chr7.2:78995290-78995309 MS.gene43202:CDS 30.0%
ACTTATTAACAACCCAAAAC+AGG + chr7.2:78998421-78998440 None:intergenic 30.0%
AGAAGAGTTGTTGAGAATTA+AGG - chr7.2:78996226-78996245 MS.gene43202:intron 30.0%
AGGATAAATAAGCAAAGCAA+AGG + chr7.2:78994145-78994164 None:intergenic 30.0%
ATGAGTACCAATTCAATATG+GGG - chr7.2:78994301-78994320 MS.gene43202:CDS 30.0%
ATGTAAATCTGGATTCTTCT+AGG - chr7.2:78997155-78997174 MS.gene43202:CDS 30.0%
ATGTCCAATGTGTTATCTTT+CGG + chr7.2:78995620-78995639 None:intergenic 30.0%
CTCTCAAATTCTTAAACTGA+AGG + chr7.2:78998538-78998557 None:intergenic 30.0%
GGATAAATAAGCAAAGCAAA+GGG + chr7.2:78994144-78994163 None:intergenic 30.0%
GTTGTATCAAACCTTATCTA+TGG - chr7.2:78994572-78994591 MS.gene43202:CDS 30.0%
TAACTTGAGATGATTGAATC+CGG + chr7.2:78997804-78997823 None:intergenic 30.0%
TAGGTGAATACTTCTATGTT+TGG - chr7.2:78994036-78994055 MS.gene43202:CDS 30.0%
TATCAATTTCTTGAGAGAAG+TGG - chr7.2:78996787-78996806 MS.gene43202:CDS 30.0%
TCACTAAACAATTATGAAGC+AGG + chr7.2:78993284-78993303 None:intergenic 30.0%
TCTCAAAATCCAAAAGCAAT+TGG + chr7.2:78996655-78996674 None:intergenic 30.0%
TCTTTCGGATAAGCAAAATT+TGG + chr7.2:78995605-78995624 None:intergenic 30.0%
TGATTCTATGAGAATGAACT+TGG - chr7.2:78995409-78995428 MS.gene43202:CDS 30.0%
TGTAAAAGCTGTTATCAAAG+AGG - chr7.2:78997612-78997631 MS.gene43202:intron 30.0%
TGTTCAAAATTGAAAGAGGA+TGG + chr7.2:78994957-78994976 None:intergenic 30.0%
TTATCCGAAAGATAACACAT+TGG - chr7.2:78995613-78995632 MS.gene43202:CDS 30.0%
! AACTTTTGTGTGTGAATTTC+TGG - chr7.2:78993394-78993413 MS.gene43202:CDS 30.0%
! AAGCTATATGTTACTTGTTC+CGG - chr7.2:78998380-78998399 MS.gene43202:intron 30.0%
! AAGGGTATATACATTTCACA+TGG + chr7.2:78994126-78994145 None:intergenic 30.0%
! GTAATATCACCAACCAATTT+TGG + chr7.2:78997121-78997140 None:intergenic 30.0%
! TACCTTCTCATTTAGAGTTA+TGG + chr7.2:78995295-78995314 None:intergenic 30.0%
! TGAGAAAAACCAATTGCTTT+TGG - chr7.2:78996643-78996662 MS.gene43202:intron 30.0%
! TGTTGAAAATGGTGGAAATT+TGG - chr7.2:78992874-78992893 MS.gene43202:CDS 30.0%
!! TGTTGATAATTTAAGGAGTG+TGG - chr7.2:78997303-78997322 MS.gene43202:CDS 30.0%
!! TTGAAAAGTATTCCAGCATA+TGG - chr7.2:78995752-78995771 MS.gene43202:CDS 30.0%
!!! AATCTTTTGAAGATGGATTG+AGG - chr7.2:78995931-78995950 MS.gene43202:intron 30.0%
!!! ATCTTTTGAAGATGGATTGA+GGG - chr7.2:78995932-78995951 MS.gene43202:intron 30.0%
!!! GCAAGAATATACTTTTTCTC+TGG + chr7.2:78995480-78995499 None:intergenic 30.0%
AAAAAAGAACGGCGAATTTG+CGG - chr7.2:78997770-78997789 MS.gene43202:intron 35.0%
AAAAACATCAATGCACACCA+TGG + chr7.2:78998039-78998058 None:intergenic 35.0%
AAAACATCAATGCACACCAT+GGG + chr7.2:78998038-78998057 None:intergenic 35.0%
AAAGTCTGAGGAAAAAGACT+TGG - chr7.2:78996118-78996137 MS.gene43202:intron 35.0%
AAATCATTTCTCCACAGTTC+TGG + chr7.2:78997033-78997052 None:intergenic 35.0%
AAGGACATTCTGATATACCA+GGG - chr7.2:78997854-78997873 MS.gene43202:intron 35.0%
AAGTCTGAGGAAAAAGACTT+GGG - chr7.2:78996119-78996138 MS.gene43202:intron 35.0%
ACCAACACTCCAAATTCAAA+AGG + chr7.2:78993075-78993094 None:intergenic 35.0%
AGAAACAAACCTCTTTCTCA+AGG + chr7.2:78992931-78992950 None:intergenic 35.0%
AGAAGTGGCTAATAGAGAAA+TGG - chr7.2:78996802-78996821 MS.gene43202:CDS 35.0%
AGCATGAAATTGATCAGTAC+AGG - chr7.2:78996318-78996337 MS.gene43202:CDS 35.0%
AGTTTCAAACCTTGAGAAAG+AGG - chr7.2:78992919-78992938 MS.gene43202:CDS 35.0%
ATAACACATTGGACATTGGT+TGG - chr7.2:78995624-78995643 MS.gene43202:CDS 35.0%
ATATCAGAATGTCCTTCACT+GGG + chr7.2:78997850-78997869 None:intergenic 35.0%
ATGAGAATACTCTGCAATGA+AGG + chr7.2:78994928-78994947 None:intergenic 35.0%
ATTGAGAATTCTTTGACCCT+TGG + chr7.2:78995133-78995152 None:intergenic 35.0%
CACAGAAGACTATTTACAGA+GGG - chr7.2:78996535-78996554 MS.gene43202:CDS 35.0%
CAGGAAACTTTCTTATAGAC+CGG + chr7.2:78998402-78998421 None:intergenic 35.0%
CAGTTTCACTCCAAACTAAA+CGG + chr7.2:78993786-78993805 None:intergenic 35.0%
CGAAGAAGAGAAGTTAAAGA+AGG - chr7.2:78996502-78996521 MS.gene43202:CDS 35.0%
GAAAACATGTTGAGAGACAA+AGG - chr7.2:78996885-78996904 MS.gene43202:CDS 35.0%
GAAACCACCTGAAAAAAGAA+CGG - chr7.2:78997759-78997778 MS.gene43202:intron 35.0%
GAAAGAGTTCAGAGATTGAT+AGG - chr7.2:78994850-78994869 MS.gene43202:CDS 35.0%
GAACCTTCTATTGACAAACA+GGG - chr7.2:78997481-78997500 MS.gene43202:intron 35.0%
GACACAGAAAACGAATAATC+AGG + chr7.2:78994275-78994294 None:intergenic 35.0%
GTAGAAGTGGAAAAGAAAGA+AGG - chr7.2:78995963-78995982 MS.gene43202:intron 35.0%
GTTTGTCAATAGAAGGTTCA+TGG + chr7.2:78997480-78997499 None:intergenic 35.0%
TACTTTGTCTAAGCAAAGAG+AGG - chr7.2:78995059-78995078 MS.gene43202:CDS 35.0%
TATATCAGAATGTCCTTCAC+TGG + chr7.2:78997851-78997870 None:intergenic 35.0%
TCAAATTGAAAGTGAGAGAG+AGG - chr7.2:78996154-78996173 MS.gene43202:CDS 35.0%
TCAGAGGGAACAATTTATTG+TGG - chr7.2:78996964-78996983 MS.gene43202:intron 35.0%
TCATTTGTTTGCTCTATCTG+AGG - chr7.2:78994422-78994441 MS.gene43202:CDS 35.0%
TCTTGATTGAGAAAAAGGAG+TGG - chr7.2:78994328-78994347 MS.gene43202:CDS 35.0%
TGAACCTTCTATTGACAAAC+AGG - chr7.2:78997480-78997499 MS.gene43202:intron 35.0%
TGATTTGAAAAGAGCAGATG+TGG - chr7.2:78996421-78996440 MS.gene43202:CDS 35.0%
TGCTGACATTGAGAATATAG+AGG - chr7.2:78997084-78997103 MS.gene43202:intron 35.0%
TTAGCGAATTGAACTAGACT+TGG - chr7.2:78993223-78993242 MS.gene43202:intron 35.0%
TTCATTCAGAAGACACAATG+AGG + chr7.2:78994165-78994184 None:intergenic 35.0%
TTCTTTGCTAAATTTCAGCC+TGG - chr7.2:78995809-78995828 MS.gene43202:intron 35.0%
! AAATTTGGATCGTGAGGTTT+TGG - chr7.2:78992889-78992908 MS.gene43202:CDS 35.0%
! ACTCCTTTTTCTCAATCAAG+AGG + chr7.2:78994329-78994348 None:intergenic 35.0%
! AGTCAAAGTCAAAGCTTTGA+AGG - chr7.2:78996079-78996098 MS.gene43202:intron 35.0%
! ATGATTCTTTTGATGCTCCA+AGG - chr7.2:78997416-78997435 MS.gene43202:intron 35.0%
! ATTTGCTGCTGAAATGGAAT+TGG - chr7.2:78996589-78996608 MS.gene43202:intron 35.0%
! TAACACATTGGACATTGGTT+GGG - chr7.2:78995625-78995644 MS.gene43202:CDS 35.0%
! TATACCACATTGTTGCTTAG+TGG - chr7.2:78994059-78994078 MS.gene43202:CDS 35.0%
! TCAAGATATAGTGGAAGTCA+AGG - chr7.2:78994374-78994393 MS.gene43202:CDS 35.0%
! TGATTCTTTTGATGCTCCAA+GGG - chr7.2:78997417-78997436 MS.gene43202:intron 35.0%
! TTTTATGTTTATGGGGACTG+AGG - chr7.2:78993588-78993607 MS.gene43202:intron 35.0%
! TTTTCCAAATGGAATTGCTG+AGG - chr7.2:78997708-78997727 MS.gene43202:intron 35.0%
!! AAAGGGAAAGGTGTTGAAAA+TGG - chr7.2:78992863-78992882 MS.gene43202:CDS 35.0%
!! AAGTCAAAGCTTTGAAGGAA+AGG - chr7.2:78996084-78996103 MS.gene43202:intron 35.0%
!! AGTCAAAGCTTTGAAGGAAA+GGG - chr7.2:78996085-78996104 MS.gene43202:intron 35.0%
!! ATTGGTTGGTGATATTACAC+AGG - chr7.2:78997123-78997142 MS.gene43202:CDS 35.0%
!! TAGCTTGTTATGATGTTCCA+AGG - chr7.2:78993420-78993439 MS.gene43202:CDS 35.0%
!! TCCTTTTGAATTTGGAGTGT+TGG - chr7.2:78993071-78993090 MS.gene43202:intron 35.0%
!! TTGGTTGGTGATATTACACA+GGG - chr7.2:78997124-78997143 MS.gene43202:CDS 35.0%
!! TTTTGTGTGTGAATTTCTGG+TGG - chr7.2:78993397-78993416 MS.gene43202:CDS 35.0%
!!! AAATTCGCCGTTCTTTTTTC+AGG + chr7.2:78997769-78997788 None:intergenic 35.0%
!!! ACCTAGTTTTAATGACGTGT+CGG + chr7.2:78994021-78994040 None:intergenic 35.0%
!!! ATGTTGGTGTTGATCAGTTT+TGG - chr7.2:78998352-78998371 MS.gene43202:intron 35.0%
!!! CATTTTGAGCTTTTTCAGCT+AGG + chr7.2:78996625-78996644 None:intergenic 35.0%
!!! GTCGAGGATTTTTTCATGAT+TGG - chr7.2:78993639-78993658 MS.gene43202:intron 35.0%
!!! GTGTGCATTGATGTTTTTAG+TGG - chr7.2:78998041-78998060 MS.gene43202:intron 35.0%
!!! TGCTTTTGGATTTTGAGATG+CGG - chr7.2:78996657-78996676 MS.gene43202:intron 35.0%
!!! TGGGTGTGTTTTGAAGTTTT+GGG - chr7.2:78993015-78993034 MS.gene43202:intron 35.0%
AAAAGACTTGGGGAAAGAGA+AGG - chr7.2:78996130-78996149 MS.gene43202:intron 40.0%
AAAGACTTGGGGAAAGAGAA+GGG - chr7.2:78996131-78996150 MS.gene43202:intron 40.0%
AAGAAGATGATGTAAACCGC+AGG - chr7.2:78995262-78995281 MS.gene43202:CDS 40.0%
AAGAGAAGGAGTTATCTGCA+TGG - chr7.2:78995438-78995457 MS.gene43202:CDS 40.0%
AAGAGACCTTCGAAAGAGAA+TGG - chr7.2:78996390-78996409 MS.gene43202:CDS 40.0%
AATACTCTGCAATGAAGGAC+AGG + chr7.2:78994923-78994942 None:intergenic 40.0%
ACAAAGGATAGAAATGCAGG+AGG - chr7.2:78996901-78996920 MS.gene43202:CDS 40.0%
ACAAGAAGCTGAAAAGTCAG+AGG - chr7.2:78996948-78996967 MS.gene43202:intron 40.0%
AGAACCAGCACAAAACAGTT+AGG + chr7.2:78993528-78993547 None:intergenic 40.0%
AGAAGCGAGAAGAGAATCTA+CGG - chr7.2:78994448-78994467 MS.gene43202:CDS 40.0%
AGACTATTTACAGAGGGAGT+TGG - chr7.2:78996541-78996560 MS.gene43202:CDS 40.0%
AGAGAAGGAGTTATCTGCAT+GGG - chr7.2:78995439-78995458 MS.gene43202:CDS 40.0%
AGAGACCTTCGAAAGAGAAT+GGG - chr7.2:78996391-78996410 MS.gene43202:CDS 40.0%
AGTCTGAGGAAAAAGACTTG+GGG - chr7.2:78996120-78996139 MS.gene43202:intron 40.0%
AGTGGCTAATAGAGAAATGG+AGG - chr7.2:78996805-78996824 MS.gene43202:CDS 40.0%
ATCTGGCAATGATATCACAG+AGG - chr7.2:78997444-78997463 MS.gene43202:intron 40.0%
ATGATACCACAACCAACAAC+AGG - chr7.2:78998645-78998664 MS.gene43202:intron 40.0%
CAAGAAGCTGAAAAGTCAGA+GGG - chr7.2:78996949-78996968 MS.gene43202:intron 40.0%
CAGCACAAAACAGTTAGGAT+AGG + chr7.2:78993523-78993542 None:intergenic 40.0%
CATCTCAAGTTACTGCTAGT+GGG - chr7.2:78997812-78997831 MS.gene43202:intron 40.0%
CCACAGAAGACTATTTACAG+AGG - chr7.2:78996534-78996553 MS.gene43202:CDS 40.0%
CCTCTGTAAATAGTCTTCTG+TGG + chr7.2:78996537-78996556 None:intergenic 40.0%
CCTTCTCATTCACATTCAGT+CGG - chr7.2:78998164-78998183 MS.gene43202:intron 40.0%
CCTTCTCTTCCAAAATTGGT+TGG - chr7.2:78997109-78997128 MS.gene43202:intron 40.0%
CTAAGCAAAGAGAGGACTTA+CGG - chr7.2:78995067-78995086 MS.gene43202:CDS 40.0%
CTAGTTCAATTCGCTAAGTG+TGG + chr7.2:78993220-78993239 None:intergenic 40.0%
CTCTAAACTATGCATGTCCT+TGG + chr7.2:78993440-78993459 None:intergenic 40.0%
CTGACTTTCAGAATCCATGT+TGG + chr7.2:78997740-78997759 None:intergenic 40.0%
GAACTTGGATCTCAAAGAGA+AGG - chr7.2:78995424-78995443 MS.gene43202:CDS 40.0%
GAAGAATGTGCTTCAACAGA+AGG - chr7.2:78996454-78996473 MS.gene43202:CDS 40.0%
GAAGGACATTCTGATATACC+AGG - chr7.2:78997853-78997872 MS.gene43202:intron 40.0%
GAAGTTAAAGAAGGAGAAGC+AGG - chr7.2:78996511-78996530 MS.gene43202:CDS 40.0%
GAATCCTCAGCAATTCCATT+TGG + chr7.2:78997715-78997734 None:intergenic 40.0%
GAGACAAAGGATAGAAATGC+AGG - chr7.2:78996898-78996917 MS.gene43202:CDS 40.0%
GATTCTTCTAGGCAAAACAC+TGG - chr7.2:78997166-78997185 MS.gene43202:CDS 40.0%
GCTCCTCTTGATTGAGAAAA+AGG - chr7.2:78994323-78994342 MS.gene43202:CDS 40.0%
TAAGCAAAGAGAGGACTTAC+GGG - chr7.2:78995068-78995087 MS.gene43202:CDS 40.0%
TAATCGTCTTCAAGTGACTG+AGG - chr7.2:78996256-78996275 MS.gene43202:intron 40.0%
TATGCTGTCCTCATTCTCAT+TGG + chr7.2:78998195-78998214 None:intergenic 40.0%
TCATCCACTAAGCAACAATG+TGG + chr7.2:78994066-78994085 None:intergenic 40.0%
TCATCTCAAGTTACTGCTAG+TGG - chr7.2:78997811-78997830 MS.gene43202:intron 40.0%
TGAATCGAGGAAGTTATTCG+AGG - chr7.2:78996739-78996758 MS.gene43202:CDS 40.0%
TGATACCACAACCAACAACA+GGG - chr7.2:78998646-78998665 MS.gene43202:intron 40.0%
TGATAGGAAATCACATGACC+TGG - chr7.2:78994866-78994885 MS.gene43202:CDS 40.0%
TTATGCGTTATGCCATATGC+TGG + chr7.2:78995767-78995786 None:intergenic 40.0%
TTCAATTCGCTAAGTGTGGT+CGG + chr7.2:78993216-78993235 None:intergenic 40.0%
TTGAATTGGCAGTGAGATGT+TGG - chr7.2:78998336-78998355 MS.gene43202:intron 40.0%
TTGCCCTGTTTGTCAATAGA+AGG + chr7.2:78997487-78997506 None:intergenic 40.0%
TTGTTCTTAGACAGCGTTGT+GGG - chr7.2:78992996-78993015 MS.gene43202:intron 40.0%
TTTACAGCCTCCCAATTCAA+AGG - chr7.2:78997531-78997550 MS.gene43202:intron 40.0%
! AACACATTGGACATTGGTTG+GGG - chr7.2:78995626-78995645 MS.gene43202:CDS 40.0%
! AGAGTCATTTGCTGCTGAAA+TGG - chr7.2:78996583-78996602 MS.gene43202:intron 40.0%
! CTATCCTAACTGTTTTGTGC+TGG - chr7.2:78993521-78993540 MS.gene43202:CDS 40.0%
! CTTCTCTGCTCTCTTTTCTA+AGG + chr7.2:78996033-78996052 None:intergenic 40.0%
! GACTTTTCAGCTTCTTGTTG+AGG + chr7.2:78996946-78996965 None:intergenic 40.0%
! GCAGGAGTTTGAGATTGAAT+TGG - chr7.2:78995896-78995915 MS.gene43202:intron 40.0%
! GTTTTGTGCTTCTATTGTCG+AGG - chr7.2:78993623-78993642 MS.gene43202:intron 40.0%
! TCACGATTTGGGTGTGATTT+CGG - chr7.2:78992829-78992848 MS.gene43202:CDS 40.0%
! TGTTCTTTTGTGCCTCTTCA+AGG + chr7.2:78995212-78995231 None:intergenic 40.0%
!! AGATGGATTGAGGGATAGAT+TGG - chr7.2:78995941-78995960 MS.gene43202:intron 40.0%
!! CCAACCAATTTTGGAAGAGA+AGG + chr7.2:78997112-78997131 None:intergenic 40.0%
!! CGTGAGACTGATTTTCCAAA+TGG - chr7.2:78997697-78997716 MS.gene43202:intron 40.0%
!! TCTGCTGATTTCAGCAAGTT+TGG + chr7.2:78994832-78994851 None:intergenic 40.0%
!!! GTGAATGAGAAGGTTTTGAG+TGG + chr7.2:78998157-78998176 None:intergenic 40.0%
!!! GTGGGTGTGTTTTGAAGTTT+TGG - chr7.2:78993014-78993033 MS.gene43202:intron 40.0%
AAAGAAAGTGAGGGAGAGGT+TGG - chr7.2:78998104-78998123 MS.gene43202:intron 45.0%
AAAGAGAGCAGAGAAGCTCA+AGG - chr7.2:78996037-78996056 MS.gene43202:intron 45.0%
AATATGCCGGCAGAAAGAGA+AGG - chr7.2:78995185-78995204 MS.gene43202:CDS 45.0%
AATGCACACCATGGGTAAGT+TGG + chr7.2:78998030-78998049 None:intergenic 45.0%
ACACTCTTTCTCAACACCCA+AGG + chr7.2:78994478-78994497 None:intergenic 45.0%
ACAGAAAGAGCTGCTGATGA+AGG - chr7.2:78996343-78996362 MS.gene43202:CDS 45.0%
AGAAGGCGAAGTCAGTCATA+TGG - chr7.2:78995980-78995999 MS.gene43202:intron 45.0%
AGAGAATCTACGGAAAGCCT+TGG - chr7.2:78994458-78994477 MS.gene43202:CDS 45.0%
AGAGGAGCCCCATATTGAAT+TGG + chr7.2:78994311-78994330 None:intergenic 45.0%
AGTCAGTCATATGGAGGAGA+AGG - chr7.2:78995989-78996008 MS.gene43202:intron 45.0%
ATATACCAGGGAGACCCAAA+AGG - chr7.2:78997866-78997885 MS.gene43202:intron 45.0%
ATCACATGACCTGGAATCTC+AGG - chr7.2:78994875-78994894 MS.gene43202:CDS 45.0%
ATGCACACCATGGGTAAGTT+GGG + chr7.2:78998029-78998048 None:intergenic 45.0%
CATGAAGATGATCCCAGTGA+AGG - chr7.2:78997835-78997854 MS.gene43202:intron 45.0%
CATTCCTGCATCAGAGGATA+TGG + chr7.2:78995389-78995408 None:intergenic 45.0%
CCGACTGAATGTGAATGAGA+AGG + chr7.2:78998167-78998186 None:intergenic 45.0%
CGAGCTGAGTCAAGATATAG+TGG - chr7.2:78994365-78994384 MS.gene43202:CDS 45.0%
CGGCATTACCAATGAGAATG+AGG - chr7.2:78998184-78998203 MS.gene43202:intron 45.0%
CTCATCCCATTCTCTTTCGA+AGG + chr7.2:78996399-78996418 None:intergenic 45.0%
CTTCAAAGTTGCCAGAACTG+TGG - chr7.2:78997019-78997038 MS.gene43202:intron 45.0%
GAAAGAGAAGGACCTTGAAG+AGG - chr7.2:78995197-78995216 MS.gene43202:CDS 45.0%
GAAGCTCAAGGAGAAAGAGA+AGG - chr7.2:78996049-78996068 MS.gene43202:intron 45.0%
GAATCACATTCCTGCATCAG+AGG + chr7.2:78995395-78995414 None:intergenic 45.0%
GAGAATCTACGGAAAGCCTT+GGG - chr7.2:78994459-78994478 MS.gene43202:CDS 45.0%
GAGGGATAGATTGGTAGAAG+TGG - chr7.2:78995950-78995969 MS.gene43202:intron 45.0%
GATGAAGATTACCAACACCC+TGG - chr7.2:78998785-78998804 MS.gene43202:CDS 45.0%
GATTTGCCAGCAAATGTTCC+TGG - chr7.2:78997355-78997374 MS.gene43202:intron 45.0%
GCAGAATCAGTTAGAGCAGA+AGG - chr7.2:78996703-78996722 MS.gene43202:CDS 45.0%
GCCGACACGTCATTAAAACT+AGG - chr7.2:78994017-78994036 MS.gene43202:CDS 45.0%
GGACAGCATAGACATTGATC+AGG - chr7.2:78998205-78998224 MS.gene43202:intron 45.0%
GGACTTTGTATCAGTTGCAG+GGG + chr7.2:78997197-78997216 None:intergenic 45.0%
GGAGTTGGAAACTCTTAAGC+TGG - chr7.2:78996556-78996575 MS.gene43202:CDS 45.0%
GGGACTTTGTATCAGTTGCA+GGG + chr7.2:78997198-78997217 None:intergenic 45.0%
GGTGCCTTCTCTTCCAAAAT+TGG - chr7.2:78997105-78997124 MS.gene43202:intron 45.0%
GTTGTTCTTAGACAGCGTTG+TGG - chr7.2:78992995-78993014 MS.gene43202:intron 45.0%
TCAGGAATCTGCCCTTAGAA+GGG - chr7.2:78994893-78994912 MS.gene43202:CDS 45.0%
TCATTGCCAGATTGTACCCT+TGG + chr7.2:78997436-78997455 None:intergenic 45.0%
TCTCAACCTACAACGTAACC+AGG + chr7.2:78995830-78995849 None:intergenic 45.0%
TGAAGGAAGCTGATGACTTG+AGG - chr7.2:78996360-78996379 MS.gene43202:CDS 45.0%
TGCTCTTGATGTGAAGAAGC+AGG - chr7.2:78995878-78995897 MS.gene43202:intron 45.0%
TGCTGTCCAGCCTTTGAATT+GGG + chr7.2:78997544-78997563 None:intergenic 45.0%
TGGAGGAGAAGGTTGCAAAA+CGG - chr7.2:78996000-78996019 MS.gene43202:intron 45.0%
TGGTGGAAATTTGGATCGTG+AGG - chr7.2:78992883-78992902 MS.gene43202:CDS 45.0%
TTGTCCATATCCTCTGATGC+AGG - chr7.2:78995382-78995401 MS.gene43202:CDS 45.0%
TTTCAGCCTGGTTACGTTGT+AGG - chr7.2:78995821-78995840 MS.gene43202:intron 45.0%
! ATTTCGGGTGAAGGTTCGAA+AGG - chr7.2:78992845-78992864 MS.gene43202:CDS 45.0%
! CACGATTTGGGTGTGATTTC+GGG - chr7.2:78992830-78992849 MS.gene43202:CDS 45.0%
! TTTCGGGTGAAGGTTCGAAA+GGG - chr7.2:78992846-78992865 MS.gene43202:CDS 45.0%
!! AGCTTTGGATTCCCCAAGAA+AGG + chr7.2:78997644-78997663 None:intergenic 45.0%
!! GGAGAAGTCTCTAAAGTCTG+AGG - chr7.2:78996106-78996125 MS.gene43202:intron 45.0%
!! GGGAAAGGTGTTGAAAATGG+TGG - chr7.2:78992866-78992885 MS.gene43202:CDS 45.0%
!! GGGTGGTTCTGATGTAAATC+TGG - chr7.2:78997144-78997163 MS.gene43202:CDS 45.0%
!! GTTGGTGATATTACACAGGG+TGG - chr7.2:78997127-78997146 MS.gene43202:CDS 45.0%
!!! TTCGCCGTTCTTTTTTCAGG+TGG + chr7.2:78997766-78997785 None:intergenic 45.0%
AAAGAGAGGACTTACGGGAG+TGG - chr7.2:78995073-78995092 MS.gene43202:CDS 50.0%
AAAGAGGCCGAAGCCTTTCT+TGG - chr7.2:78997628-78997647 MS.gene43202:intron 50.0%
AAGAGAGGACTTACGGGAGT+GGG - chr7.2:78995074-78995093 MS.gene43202:CDS 50.0%
AAGAGGCCGAAGCCTTTCTT+GGG - chr7.2:78997629-78997648 MS.gene43202:intron 50.0%
ACACCCTGGTGAAACATCAG+TGG - chr7.2:78998799-78998818 MS.gene43202:CDS 50.0%
ACCCTGGTGAAACATCAGTG+GGG - chr7.2:78998801-78998820 MS.gene43202:CDS 50.0%
AGACAGTTCCACCAGGAACA+GGG + chr7.2:78997219-78997238 None:intergenic 50.0%
AGCAACACGCCGAATAAGAG+TGG - chr7.2:78992800-78992819 MS.gene43202:CDS 50.0%
AGGATCATGACGCTGAGTAC+AGG - chr7.2:78998708-78998727 MS.gene43202:CDS 50.0%
AGGCGAAGTCAGTCATATGG+AGG - chr7.2:78995983-78996002 MS.gene43202:intron 50.0%
AGTTTGTGTGCGCTTCACTC+TGG + chr7.2:78997593-78997612 None:intergenic 50.0%
CAAGGTCCTTCTCTTTCTGC+CGG + chr7.2:78995194-78995213 None:intergenic 50.0%
CACCCTGGTGAAACATCAGT+GGG - chr7.2:78998800-78998819 MS.gene43202:CDS 50.0%
CATCAGTGGGGAAGAAGCTT+TGG - chr7.2:78998813-78998832 MS.gene43202:CDS 50.0%
CGAATTTGCGGAAGCGAAAC+CGG - chr7.2:78997782-78997801 MS.gene43202:intron 50.0%
CTCACTCAAAGCCCTGTTGT+TGG + chr7.2:78998660-78998679 None:intergenic 50.0%
CTCAGGAATCTGCCCTTAGA+AGG - chr7.2:78994892-78994911 MS.gene43202:CDS 50.0%
CTGATGTTTCACCAGGGTGT+TGG + chr7.2:78998799-78998818 None:intergenic 50.0%
CTGCTGTCCAGCCTTTGAAT+TGG + chr7.2:78997545-78997564 None:intergenic 50.0%
GAAGGAGTTATCTGCATGGG+AGG - chr7.2:78995442-78995461 MS.gene43202:CDS 50.0%
GAGTTATGGTTGCAAGCCTG+CGG + chr7.2:78995281-78995300 None:intergenic 50.0%
GATACAAAGTCCCCTGTTCC+TGG - chr7.2:78997205-78997224 MS.gene43202:CDS 50.0%
GCAACACGCCGAATAAGAGT+GGG - chr7.2:78992801-78992820 MS.gene43202:CDS 50.0%
GCAGGATGGAGAAGAAAGAC+TGG - chr7.2:78995107-78995126 MS.gene43202:CDS 50.0%
GGAGGAGAAGGTTGCAAAAC+GGG - chr7.2:78996001-78996020 MS.gene43202:intron 50.0%
GGATTCCCCAAGAAAGGCTT+CGG + chr7.2:78997638-78997657 None:intergenic 50.0%
GGGGACTTTGTATCAGTTGC+AGG + chr7.2:78997199-78997218 None:intergenic 50.0%
GGTGAAGGTTCGAAAGGGAA+AGG - chr7.2:78992851-78992870 MS.gene43202:CDS 50.0%
GTTGGTCGTGCAAATGATGC+AGG - chr7.2:78998122-78998141 MS.gene43202:intron 50.0%
TCACATCAAGAGCAGCACTG+TGG + chr7.2:78995872-78995891 None:intergenic 50.0%
TCAGTGCCAGGAACATTTGC+TGG + chr7.2:78997364-78997383 None:intergenic 50.0%
TCCCCACTGATGTTTCACCA+GGG + chr7.2:78998805-78998824 None:intergenic 50.0%
TCGTCTTCAAGTGACTGAGG+AGG - chr7.2:78996259-78996278 MS.gene43202:intron 50.0%
TCTGCTTCATTCTCAGTGCC+AGG + chr7.2:78997376-78997395 None:intergenic 50.0%
TCTGTTAGAGACGTGTCTGC+TGG - chr7.2:78998077-78998096 MS.gene43202:intron 50.0%
TGACCCGACCCACTCTTATT+CGG + chr7.2:78992812-78992831 None:intergenic 50.0%
TGCACACCATGGGTAAGTTG+GGG + chr7.2:78998028-78998047 None:intergenic 50.0%
TGCTGAGGATTCTGCCAACA+TGG - chr7.2:78997723-78997742 MS.gene43202:intron 50.0%
TGCTTTCCCCAACTTACCCA+TGG - chr7.2:78998019-78998038 MS.gene43202:intron 50.0%
TGGGAGAAGAAACTGCAGGA+TGG - chr7.2:78995093-78995112 MS.gene43202:CDS 50.0%
TGTCCAGCCTTTGAATTGGG+AGG + chr7.2:78997541-78997560 None:intergenic 50.0%
TGTGTGTCAACAGCTCGAGA+AGG - chr7.2:78994671-78994690 MS.gene43202:CDS 50.0%
TGTTTACGCCGCAGAGATTG+TGG - chr7.2:78992768-78992787 MS.gene43202:CDS 50.0%
TTCAAGTGACTGAGGAGGAG+AGG - chr7.2:78996264-78996283 MS.gene43202:intron 50.0%
TTCCCCACTGATGTTTCACC+AGG + chr7.2:78998806-78998825 None:intergenic 50.0%
TTCCTGGTGGAACTGTCTCT+TGG - chr7.2:78997221-78997240 MS.gene43202:CDS 50.0%
! AGACTTGGTTCTTGCCGTCA+TGG - chr7.2:78993238-78993257 MS.gene43202:intron 50.0%
! AGCCTTTTGACGCCTCCTTT+TGG + chr7.2:78997884-78997903 None:intergenic 50.0%
! CAAAGCCCTGTTGTTGGTTG+TGG + chr7.2:78998654-78998673 None:intergenic 50.0%
! GACTTGGTTCTTGCCGTCAT+GGG - chr7.2:78993239-78993258 MS.gene43202:intron 50.0%
! GATGCTCCAAGGGTACAATC+TGG - chr7.2:78997427-78997446 MS.gene43202:intron 50.0%
! GCCTTTTGACGCCTCCTTTT+GGG + chr7.2:78997883-78997902 None:intergenic 50.0%
! GCTTTGAGTGAGGAGGTGAA+CGG - chr7.2:78998668-78998687 MS.gene43202:intron 50.0%
! GGAGAAGAAAGACTGGCCAA+GGG - chr7.2:78995114-78995133 MS.gene43202:CDS 50.0%
! TGGAGAAGAAAGACTGGCCA+AGG - chr7.2:78995113-78995132 MS.gene43202:CDS 50.0%
! TTGGGTGTGATTTCGGGTGA+AGG - chr7.2:78992836-78992855 MS.gene43202:CDS 50.0%
!! ACCCAAAAGGAGGCGTCAAA+AGG - chr7.2:78997879-78997898 MS.gene43202:intron 50.0%
!! CAACAACAGGGCTTTGAGTG+AGG - chr7.2:78998658-78998677 MS.gene43202:intron 50.0%
!! TCTCTGCTGCTTTCTGAGAC+TGG + chr7.2:78998610-78998629 None:intergenic 50.0%
AAAGCTGCTGAGGCAGTACC+TGG - chr7.2:78997658-78997677 MS.gene43202:intron 55.0%
AAGCTGCTGAGGCAGTACCT+GGG - chr7.2:78997659-78997678 MS.gene43202:intron 55.0%
ACAAAGTCCCCTGTTCCTGG+TGG - chr7.2:78997208-78997227 MS.gene43202:CDS 55.0%
ACGCCGAATAAGAGTGGGTC+GGG - chr7.2:78992806-78992825 MS.gene43202:CDS 55.0%
AGAGGCCGAAGCCTTTCTTG+GGG - chr7.2:78997630-78997649 MS.gene43202:intron 55.0%
AGCAGAAACCTCGCAGAGGA+GGG - chr7.2:78997560-78997579 MS.gene43202:intron 55.0%
AGCCAAGAGACAGTTCCACC+AGG + chr7.2:78997226-78997245 None:intergenic 55.0%
AGGACAGGCGTTCCCTTCTA+AGG + chr7.2:78994908-78994927 None:intergenic 55.0%
AGTGGGTCGGGTCACGATTT+GGG - chr7.2:78992818-78992837 MS.gene43202:CDS 55.0%
CACGCCGAATAAGAGTGGGT+CGG - chr7.2:78992805-78992824 MS.gene43202:CDS 55.0%
CAGCCTCCCAATTCAAAGGC+TGG - chr7.2:78997535-78997554 MS.gene43202:intron 55.0%
CGATCATCCACAGATTCCCC+AGG + chr7.2:78997679-78997698 None:intergenic 55.0%
CGGCAAAGAAAGTGAGGGAG+AGG - chr7.2:78998100-78998119 MS.gene43202:intron 55.0%
GAATCCCGTGGAGAAGATGC+AGG - chr7.2:78998734-78998753 MS.gene43202:CDS 55.0%
GACAGTTCCACCAGGAACAG+GGG + chr7.2:78997218-78997237 None:intergenic 55.0%
GAGACAGTTCCACCAGGAAC+AGG + chr7.2:78997220-78997239 None:intergenic 55.0%
GAGTACAGGAGTGAATCCCG+TGG - chr7.2:78998722-78998741 MS.gene43202:CDS 55.0%
GAGTGAGGAGGTGAACGGAA+CGG - chr7.2:78998673-78998692 MS.gene43202:intron 55.0%
GCTGGCGGCAAAGAAAGTGA+GGG - chr7.2:78998095-78998114 MS.gene43202:intron 55.0%
GGACAGGCGTTCCCTTCTAA+GGG + chr7.2:78994907-78994926 None:intergenic 55.0%
GGAGTGGGAGAAGAAACTGC+AGG - chr7.2:78995089-78995108 MS.gene43202:CDS 55.0%
GGCATCAGCAGAGCGTAACT+TGG + chr7.2:78994811-78994830 None:intergenic 55.0%
GGGCAGATTCCTGAGATTCC+AGG + chr7.2:78994887-78994906 None:intergenic 55.0%
GTTAGAGACGTGTCTGCTGG+CGG - chr7.2:78998080-78998099 MS.gene43202:intron 55.0%
GTTTCACCGGCAGTTTGTGC+CGG + chr7.2:78997916-78997935 None:intergenic 55.0%
TACCAGGGAGACCCAAAAGG+AGG - chr7.2:78997869-78997888 MS.gene43202:intron 55.0%
TACGCCGCAGAGATTGTGGT+CGG - chr7.2:78992772-78992791 MS.gene43202:CDS 55.0%
TCAAAAGGCTGCTGCTCCTC+CGG - chr7.2:78997894-78997913 MS.gene43202:intron 55.0%
TGCTGGCGGCAAAGAAAGTG+AGG - chr7.2:78998094-78998113 MS.gene43202:intron 55.0%
TGGGGAATCCAAAGCTGCTG+AGG - chr7.2:78997648-78997667 MS.gene43202:intron 55.0%
! AGGTACTGCCTCAGCAGCTT+TGG + chr7.2:78997659-78997678 None:intergenic 55.0%
!! CAACAGGGCTTTGAGTGAGG+AGG - chr7.2:78998661-78998680 MS.gene43202:intron 55.0%
AACCTCGCAGAGGAGGGGTA+AGG - chr7.2:78997566-78997585 MS.gene43202:intron 60.0%
ACCTCGCAGAGGAGGGGTAA+GGG - chr7.2:78997567-78997586 MS.gene43202:intron 60.0%
ACGCCGCAGAGATTGTGGTC+GGG - chr7.2:78992773-78992792 MS.gene43202:CDS 60.0%
AGCTGCTGAGGCAGTACCTG+GGG - chr7.2:78997660-78997679 MS.gene43202:intron 60.0%
CAGCAGAAACCTCGCAGAGG+AGG - chr7.2:78997559-78997578 MS.gene43202:intron 60.0%
CGACCCGACCACAATCTCTG+CGG + chr7.2:78992779-78992798 None:intergenic 60.0%
CGCAGAGATTGTGGTCGGGT+CGG - chr7.2:78992777-78992796 MS.gene43202:CDS 60.0%
CGTCGTCGTCGTCGTCAACT+CGG + chr7.2:78998760-78998779 None:intergenic 60.0%
CTCGGCCTGCATCTTCTCCA+CGG + chr7.2:78998742-78998761 None:intergenic 60.0%
GAACGGAACGGCAGAAGACG+TGG - chr7.2:78998685-78998704 MS.gene43202:CDS 60.0%
GAGTGGGTCGGGTCACGATT+TGG - chr7.2:78992817-78992836 MS.gene43202:CDS 60.0%
GCAGAAACCTCGCAGAGGAG+GGG - chr7.2:78997561-78997580 MS.gene43202:intron 60.0%
GGACAGCAGAAACCTCGCAG+AGG - chr7.2:78997556-78997575 MS.gene43202:intron 60.0%
GGCAGTACCTGGGGAATCTG+TGG - chr7.2:78997669-78997688 MS.gene43202:intron 60.0%
TCGGCCTGCATCTTCTCCAC+GGG + chr7.2:78998741-78998760 None:intergenic 60.0%
CGGAACGGCAGAAGACGTGG+AGG - chr7.2:78998688-78998707 MS.gene43202:CDS 65.0%
GCTCCTCCGGCACAAACTGC+CGG - chr7.2:78997907-78997926 MS.gene43202:intron 65.0%
TCACCGGCAGTTTGTGCCGG+AGG + chr7.2:78997913-78997932 None:intergenic 65.0%
!! CGCCTCCTTTTGGGTCTCCC+TGG + chr7.2:78997874-78997893 None:intergenic 65.0%
GCCCTTACCCCTCCTCTGCG+AGG + chr7.2:78997571-78997590 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 78992767 78998853 78992767 ID=MS.gene43202
chr7.2 mRNA 78992767 78998853 78992767 ID=MS.gene43202.t1;Parent=MS.gene43202
chr7.2 exon 78998680 78998853 78998680 ID=MS.gene43202.t1.exon1;Parent=MS.gene43202.t1
chr7.2 CDS 78998680 78998853 78998680 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78997114 78997323 78997114 ID=MS.gene43202.t1.exon2;Parent=MS.gene43202.t1
chr7.2 CDS 78997114 78997323 78997114 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78996683 78996936 78996683 ID=MS.gene43202.t1.exon3;Parent=MS.gene43202.t1
chr7.2 CDS 78996683 78996936 78996683 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78996309 78996579 78996309 ID=MS.gene43202.t1.exon4;Parent=MS.gene43202.t1
chr7.2 CDS 78996309 78996579 78996309 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78996133 78996216 78996133 ID=MS.gene43202.t1.exon5;Parent=MS.gene43202.t1
chr7.2 CDS 78996133 78996216 78996133 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78993658 78995777 78993658 ID=MS.gene43202.t1.exon6;Parent=MS.gene43202.t1
chr7.2 CDS 78993658 78995777 78993658 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78993394 78993559 78993394 ID=MS.gene43202.t1.exon7;Parent=MS.gene43202.t1
chr7.2 CDS 78993394 78993559 78993394 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
chr7.2 exon 78992767 78993009 78992767 ID=MS.gene43202.t1.exon8;Parent=MS.gene43202.t1
chr7.2 CDS 78992767 78993009 78992767 ID=cds.MS.gene43202.t1;Parent=MS.gene43202.t1
Gene Sequence

>MS.gene43202

ATGTTTACGCCGCAGAGATTGTGGTCGGGTCGGAGCAACACGCCGAATAAGAGTGGGTCGGGTCACGATTTGGGTGTGATTTCGGGTGAAGGTTCGAAAGGGAAAGGTGTTGAAAATGGTGGAAATTTGGATCGTGAGGTTTTGGTTGAGAGAGTTTCAAACCTTGAGAAAGAGGTTTGTTTCTTGTTTTTTTTTTTTTAATAATGTTTTGTTTTAATGTTTTTGTTAGTTGTTCTTAGACAGCGTTGTGGGTGTGTTTTGAAGTTTTGGGTAAACACTAGAAAAAAAATTCAAAAAAAAAAATTCCTTTTGAATTTGGAGTGTTGGTTGTTTTTAGATTTTAGTTTGAATTTCTCTGATGTGTAGTTTGAAAGATCTAGAGTTTAATTAGTTGAATCGAAATATGATTTATGATAGAATATTATGACGTAATTTGATGCATGTAACCGACCACACTTAGCGAATTGAACTAGACTTGGTTCTTGCCGTCATGGGAAGTTTAAGATTTTGAAATCCTGCTTCATAATTGTTTAGTGAACTTTGAAAATTTATGGAATATTTTGACTTGGCTGTTTGTGATATTTGCAGAAAGTTTTGTTCTTTTTGTTTAGTTGCTTTAGGTGTTCAAACTTTTGTGTGTGAATTTCTGGTGGTAGCTTGTTATGATGTTCCAAGGACATGCATAGTTTAGAGATAGTAGACAGATAATTTAGTCATTAATGTTGCTTTGGTTGATTTAGATAATAATTCAAACCTATCCTAACTGTTTTGTGCTGGTTCTAGTACTTTTTTCTTTATGGTGATTCAAATAATGTACACTCTTTTATGTTTATGGGGACTGAGGAAGAATGATGTTGTTTTGTGCTTCTATTGTCGAGGATTTTTTCATGATTGGTTTTGGACGTTCGTTGTAAAAAAGTGAAATTTTGTAGTAATGCATAATGTGTTTTTTTTTTTTTTTTTTGGATTAAACAAGATTTTAGAGGGTCCTAGTTTTTAAAATCAAATTTTAATTTCCGTTTAGTTTGGAGTGAAACTGTAAAGTGTTCATTTATCTGTCCTTTACTTCAGTTATATATCATTTACACTATCAGTGTTATTGAACATATGGAGAAACTCATTATTGAGAAGTTATGTGTTTGTTAGTATAGATATGTCAACAAGATTTTTAATGAGATGCATATTAGTTAATTTTGACGTTTTGTTGTACGGAAGTCTAAAGTAGAGAAGCAATATTGTATGCAGTTGTAGCCGACACGTCATTAAAACTAGGTGAATACTTCTATGTTTGGTATACCACATTGTTGCTTAGTGGATGACGACAGCCTTGCATAAGTTATAATTTTTCAAGTGCTGCCATGTGAAATGTATATACCCTTTGCTTTGCTTATTTATCCTCATTGTGTCTTCTGAATGAAGTTAACATTTTTGCGAAGAGTTCATCATTTGTAGTTATATTTTTTATCATCATAAAAATAACATTTTTTTTTTTTTTTTTGATTTGACCTGATTATTCGTTTTCTGTGTCAGCTTTATGAGTACCAATTCAATATGGGGCTCCTCTTGATTGAGAAAAAGGAGTGGAACTCTAACTATAACGAGCTGAGTCAAGATATAGTGGAAGTCAAGGATGCTCTTGAACAAGAAAAAGCAGCTCATTTGTTTGCTCTATCTGAGGCAGAGAAGCGAGAAGAGAATCTACGGAAAGCCTTGGGTGTTGAGAAAGAGTGTGTGCTTGATGTAAGTTTTTTCGACATGAATTTTATATTTTCACTAATTTTTTTCTTAAACGCAAAATCATGTCTGTTGTATCAAACCTTATCTATGGATAGTCTTTATCTGAAACTGTTGATACTTTTCTTATTATTACATTTAAGATTGTTTGTTCCTAATATTTGTAAACTTGTGTGTCAACAGCTCGAGAAGGCTCTACGAGAAATGCGTTCAGAGCATGCAAAGATTAAATTTGCAGCAGACTCAAAGTTAGCTGAAGCAAATGCTTTAATAGCTAGTGTTGAAGAGAAATCTTTAGAAGTAGAAGCCAAGTTACGCTCTGCTGATGCCAAACTTGCTGAAATCAGCAGAAAGAGTTCAGAGATTGATAGGAAATCACATGACCTGGAATCTCAGGAATCTGCCCTTAGAAGGGAACGCCTGTCCTTCATTGCAGAGTATTCTCATAATTATCCATCCTCTTTCAATTTTGAACATTTTTTCAGTTTTTTCTTTGTAATTTGTATTCTCATGGCTAATTTATTTTTATTGATGAGACAGGCAAGAATCTCATGAAAGTACTTTGTCTAAGCAAAGAGAGGACTTACGGGAGTGGGAGAAGAAACTGCAGGATGGAGAAGAAAGACTGGCCAAGGGTCAAAGAATTCTCAATGAAAGAGAGCAGAGAGCTAATGATATTGACAAAATATGCCGGCAGAAAGAGAAGGACCTTGAAGAGGCACAAAAGAACATTGATGCAGCAAATGTTACATTGAGAAGCAAAGAAGATGATGTAAACCGCAGGCTTGCAACCATAACTCTAAATGAGAAGGTAAATATTAATTATAATGTGATATTGATTAGCTATATTTTGTTTGATCTGTCAAACGCCACATTTTAATTTGTCCATATCCTCTGATGCAGGAATGTGATTCTATGAGAATGAACTTGGATCTCAAAGAGAAGGAGTTATCTGCATGGGAGGAAAAACTCAATGCCAGAGAAAAAGTATATTCTTGCACCTTCTTATTTTTTGATTATTTTTTCTGTTAATTTTGGAGATGGGCAGCAAATAATTATGTGTAAATTTTTGAATTTTATTTATTTGTAGCATTTTTGTTTCCAAATTTTGCTTATCCGAAAGATAACACATTGGACATTGGTTGGGGTGTATGCTTTTTGAATAATCTAAAAATGGAAAAATGGCATTTATTGTATGCTTTTTTCAGATCAATAATAAAATCAGTGTCGTGTGAGCATCAATATTTATTATTGAAAAGTATTCCAGCATATGGCATAACGCATAACACTACTATATTTTATTTTCACTTCTTTGCTAAATTTCAGCCTGGTTACGTTGTAGGTTGAGATTCAGAAGCTTGTTGATGACCACAGTGCTGCTCTTGATGTGAAGAAGCAGGAGTTTGAGATTGAATTGGAAGAAAAAAGAAAATCTTTTGAAGATGGATTGAGGGATAGATTGGTAGAAGTGGAAAAGAAAGAAGGCGAAGTCAGTCATATGGAGGAGAAGGTTGCAAAACGGGAGCAAGCCTTAGAAAAGAGAGCAGAGAAGCTCAAGGAGAAAGAGAAGGAACATGAAGTCAAAGTCAAAGCTTTGAAGGAAAGGGAGAAGTCTCTAAAGTCTGAGGAAAAAGACTTGGGGAAAGAGAAGGGTCAAATTGAAAGTGAGAGAGAGGAGTTGCTCAGTCTCAAGTCTGAAGTTGAGAAATTAAGAGCTAACAATGAAGAAGAGTTGTTGAGAATTAAGGAAGAGACTAATCGTCTTCAAGTGACTGAGGAGGAGAGGTCTGAATACATACGTTTGCAGTCACAACTGAAGCATGAAATTGATCAGTACAGGCAACAGAAAGAGCTGCTGATGAAGGAAGCTGATGACTTGAGGCAGCAAAAAGAGACCTTCGAAAGAGAATGGGATGAGCTTGATTTGAAAAGAGCAGATGTGGAGAAAGAGCTGAAGAATGTGCTTCAACAGAAGGAAGAAATTTTAAAACTACAACAAAACGAAGAAGAGAAGTTAAAGAAGGAGAAGCAGGCCACAGAAGACTATTTACAGAGGGAGTTGGAAACTCTTAAGCTGGCTAAAGAGTCATTTGCTGCTGAAATGGAATTGGAAAAGTCAAGCCTAGCTGAAAAAGCTCAAAATGAGAAAAACCAATTGCTTTTGGATTTTGAGATGCGGAGAAAAGAACTTGAAGCTGACATGCAGAATCAGTTAGAGCAGAAGGAAAAAGACTTATTTGAATCGAGGAAGTTATTCGAGGAGAAGAGAGAAAGTGAATTGATCAATATCAATTTCTTGAGAGAAGTGGCTAATAGAGAAATGGAGGAAATGAAACATCAAAGAAGTAAATTAGAGAGGGAGAAACAAGATGCAGATGAGAATAGAAAACATGTTGAGAGACAAAGGATAGAAATGCAGGAGGACATAGATGTACTCGTCGACCTCAACAAGAAGCTGAAAAGTCAGAGGGAACAATTTATTGTGGAGAGAAGTCGCTTTATTGATGTTGTAGAGAAACTTCAAAGTTGCCAGAACTGTGGAGAAATGATTTCTGAATTTGTGCTGTCTGATTTACAATCTTCTGCTGACATTGAGAATATAGAGGTGCCTTCTCTTCCAAAATTGGTTGGTGATATTACACAGGGTGGTTCTGATGTAAATCTGGATTCTTCTAGGCAAAACACTGGAGCATCCCCTGCAACTGATACAAAGTCCCCTGTTCCTGGTGGAACTGTCTCTTGGCTTCGAAAATGCACCTCTAAGATTTTCAAGATATCTCCCATTAAAAAGATTGAATCTGATGTTGATAATTTAAGGAGTGTGGATACTTTGCCTTTTGATAAAACTAATGAAGATTTGCCAGCAAATGTTCCTGGCACTGAGAATGAAGCAGAGTTGTCTTTTGCTATCGCAGATGATTCTTTTGATGCTCCAAGGGTACAATCTGGCAATGATATCACAGAGGTTGAAGCTGACCATGAACCTTCTATTGACAAACAGGGCAACATTGACACTACAGCGACAGATGATTTACAGCCTCCCAATTCAAAGGCTGGACAGCAGAAACCTCGCAGAGGAGGGGTAAGGGCCAGAGTGAAGCGCACACAAACTGTAAAAGCTGTTATCAAAGAGGCCGAAGCCTTTCTTGGGGAATCCAAAGCTGCTGAGGCAGTACCTGGGGAATCTGTGGATGATCGTGAGACTGATTTTCCAAATGGAATTGCTGAGGATTCTGCCAACATGGATTCTGAAAGTCAGAAACCACCTGAAAAAAGAACGGCGAATTTGCGGAAGCGAAACCGGATTCAATCATCTCAAGTTACTGCTAGTGGGCATGAAGATGATCCCAGTGAAGGACATTCTGATATACCAGGGAGACCCAAAAGGAGGCGTCAAAAGGCTGCTGCTCCTCCGGCACAAACTGCCGGTGAAACAAGATATAATTTGAGGCGTCTCAAAACGTGAGTATACCCTTGATTTCCGTTTTATTGTTTTTGTATGTGATAGTTGTCAATGTTGCTTTCCCCAACTTACCCATGGTGTGCATTGATGTTTTTAGTGGTGCGACAACTTCATCTGTTAGAGACGTGTCTGCTGGCGGCAAAGAAAGTGAGGGAGAGGTTGGTCGTGCAAATGATGCAGGAGTAAATATCCACTCAAAACCTTCTCATTCACATTCAGTCGGCATTACCAATGAGAATGAGGACAGCATAGACATTGATCAGGTAAGCTTGATATAGTAGCTTTTCAATTGGAACGCTGCGCATACTTTTATTCTTTATTTTATTTTTATTATTTATTCTTATATTTCAAATTAGCCTTCAGTTTAAGAATTTGAATTGGCAGTGAGATGTTGGTGTTGATCAGTTTTGGATAACAAGCTATATGTTACTTGTTCCGGTCTATAAGAAAGTTTCCTGTTTTGGGTTGTTAATAAGTTTTGGATAACAAGCATTCAAAAAAAGCCTTCAGTTTAAGAATTCTTTCTTTTTTTTTTACTTTATTTATTATTTATTCTTATATTTCAAATTAGCCTTCAGTTTAAGAATTTGAGAGATTTTGGTGTGTTAATAAGTTTTGGATATCTCGCTAAATGTTGCTTGTTCCAGTCTCAGAAAGCAGCAGAGACGCATGATGATTATGATGATACCACAACCAACAACAGGGCTTTGAGTGAGGAGGTGAACGGAACGGCAGAAGACGTGGAGGATCATGACGCTGAGTACAGGAGTGAATCCCGTGGAGAAGATGCAGGCCGAGTTGACGACGACGACGACGAGTTTGATGAAGATTACCAACACCCTGGTGAAACATCAGTGGGGAAGAAGCTTTGGAAATTTTTTACAACATAA

Protein sequence

>MS.gene43202.t1

MFTPQRLWSGRSNTPNKSGSGHDLGVISGEGSKGKGVENGGNLDREVLVERVSNLEKELYEYQFNMGLLLIEKKEWNSNYNELSQDIVEVKDALEQEKAAHLFALSEAEKREENLRKALGVEKECVLDLEKALREMRSEHAKIKFAADSKLAEANALIASVEEKSLEVEAKLRSADAKLAEISRKSSEIDRKSHDLESQESALRRERLSFIAEQESHESTLSKQREDLREWEKKLQDGEERLAKGQRILNEREQRANDIDKICRQKEKDLEEAQKNIDAANVTLRSKEDDVNRRLATITLNEKECDSMRMNLDLKEKELSAWEEKLNAREKVEIQKLVDDHSAALDVKKQEFEIELEEKRKSFEDGLRDRLVEVEKKEGEVSHMEEKVAKREQALEKRAEKLKEKEKEHEVKVKALKEREKSLKSEEKDLGKEKGQIESEREELLSLKSEVEKLRANNEEELLRIKEETNRLQVTEEERSEYIRLQSQLKHEIDQYRQQKELLMKEADDLRQQKETFEREWDELDLKRADVEKELKNVLQQKEEILKLQQNEEEKLKKEKQATEDYLQRELETLKLAKESFAAEMELEKSSLAEKAQNEKNQLLLDFEMRRKELEADMQNQLEQKEKDLFESRKLFEEKRESELININFLREVANREMEEMKHQRSKLEREKQDADENRKHVERQRIEMQEDIDVLVDLNKKLKSQREQFIVERSRFIDVVEKLQSCQNCGEMISEFVLSDLQSSADIENIEVPSLPKLVGDITQGGSDVNLDSSRQNTGASPATDTKSPVPGGTVSWLRKCTSKIFKISPIKKIESDVDNLRSVDTLPFDKTNEDLPANVPGTENEAELSFAIADDSFDAPRVQSGNDITEVEADHEPSIDKQGNIDTTATDDLQPPNSKAGQQKPRRGGVRARVKRTQTVKAVIKEAEAFLGESKAAEAVPGESVDDRETDFPNGIAEDSANMDSESQKPPEKRTANLRKRNRIQSSQVTASGHEDDPSEGHSDIPGRPKRRRQKAAAPPAQTAGETRYNLRRLKTGATTSSVRDVSAGGKESEGEVGRANDAGVNIHSKPSHSHSVGITNENEDSIDIDQSQKAAETHDDYDDTTTNNRALSEEVNGTAEDVEDHDAEYRSESRGEDAGRVDDDDDEFDEDYQHPGETSVGKKLWKFFTT