Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57196.t1 | XP_003611629.1 | 99 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 2.00E-173 | 618.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57196.t1 | Q9FN15 | 76.4 | 275 | 63 | 1 | 40 | 312 | 53 | 327 | 3.8e-120 | 432.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57196.t1 | G7IU15 | 99.0 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 1.5e-173 | 618.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene57196 | 0.846664 | 1.88E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene57196 | 0.822482 | 2.31E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene57196 | 0.849927 | 2.36E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene57196 | 0.819697 | 1.01E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene57196 | 0.805874 | 1.08E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene57196 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene57196 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene57196 | 0.80843 | 3.11E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene57196 | 0.812092 | 5.05E-51 | -1.69E-46 |
| MS.gene050553 | MS.gene57196 | 0.832417 | 9.57E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene57196 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene57196 | 0.827012 | 1.98E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene57196 | 0.805668 | 1.19E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene57196 | 0.807316 | 5.36E-50 | -1.69E-46 |
| MS.gene050809 | MS.gene57196 | -0.804535 | 2.06E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene57196 | 0.849712 | 2.71E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene57196 | 0.833278 | 5.85E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene57196 | 0.832302 | 1.02E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene57196 | 0.832597 | 8.63E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene57196 | 0.82441 | 8.20E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene57196 | 0.808024 | 3.80E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene57196 | 0.856447 | 3.20E-62 | -1.69E-46 |
| MS.gene051874 | MS.gene57196 | 0.864047 | 1.61E-64 | -1.69E-46 |
| MS.gene051941 | MS.gene57196 | 0.821323 | 4.29E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene57196 | 0.826496 | 2.63E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene57196 | 0.820226 | 7.67E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene57196 | 0.83617 | 1.09E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene57196 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene57196 | 0.800621 | 1.32E-48 | -1.69E-46 |
| MS.gene052870 | MS.gene57196 | 0.809548 | 1.79E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene57196 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene57196 | 0.811065 | 8.43E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene57196 | 0.817486 | 3.22E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene57196 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene57196 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene57196 | 0.856461 | 3.17E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene57196 | 0.830629 | 2.64E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene57196 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene57196 | 0.825148 | 5.49E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene57196 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene57196 | 0.865772 | 4.63E-65 | -1.69E-46 |
| MS.gene053889 | MS.gene57196 | 0.827423 | 1.58E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene57196 | 0.834871 | 2.33E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene57196 | 0.867509 | 1.30E-65 | -1.69E-46 |
| MS.gene054003 | MS.gene57196 | 0.800316 | 1.53E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene57196 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene57196 | 0.900995 | 4.19E-78 | -1.69E-46 |
| MS.gene05505 | MS.gene57196 | 0.828969 | 6.69E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene57196 | 0.815636 | 8.35E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene57196 | 0.832404 | 9.64E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene57196 | 0.804666 | 1.94E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene57196 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene57196 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene055741 | MS.gene57196 | 0.869461 | 3.04E-66 | -1.69E-46 |
| MS.gene055744 | MS.gene57196 | 0.867102 | 1.75E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene57196 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene57196 | 0.836687 | 8.08E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene57196 | 0.835338 | 1.78E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene57196 | 0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene57196 | 0.838384 | 2.97E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene57196 | 0.805762 | 1.14E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene57196 | 0.821791 | 3.35E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene57196 | 0.834699 | 2.58E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene57196 | 0.826042 | 3.37E-54 | -1.69E-46 |
| MS.gene056947 | MS.gene57196 | 0.80551 | 1.29E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene57196 | 0.823549 | 1.30E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene57196 | 0.861364 | 1.08E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene57196 | 0.823532 | 1.32E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene57196 | 0.821139 | 4.73E-53 | -1.69E-46 |
| MS.gene057289 | MS.gene57196 | 0.852826 | 3.58E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene57196 | 0.849349 | 3.42E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene57196 | 0.80314 | 4.02E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene57196 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene57196 | 0.805664 | 1.20E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene57196 | 0.806608 | 7.57E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene57196 | 0.803615 | 3.20E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene57196 | 0.860625 | 1.81E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene57196 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene57196 | 0.813766 | 2.17E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene57196 | 0.842088 | 3.20E-58 | -1.69E-46 |
| MS.gene058448 | MS.gene57196 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene57196 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene57196 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene57196 | 0.845334 | 4.33E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene57196 | 0.806722 | 7.16E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene57196 | 0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene57196 | 0.82979 | 4.23E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene57196 | 0.825641 | 4.20E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene57196 | 0.841664 | 4.14E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene57196 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene57196 | 0.840534 | 8.21E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene57196 | 0.809343 | 1.98E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene57196 | 0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene57196 | 0.808013 | 3.81E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene57196 | 0.850658 | 1.47E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene57196 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene57196 | 0.843166 | 1.66E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene57196 | 0.849616 | 2.88E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene57196 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene57196 | 0.82881 | 7.31E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57196.t1 | MTR_5g016100 | 99.038 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 0.0 | 635 |
| MS.gene57196.t1 | MTR_5g016100 | 99.556 | 225 | 1 | 0 | 88 | 312 | 1 | 225 | 9.01e-164 | 455 |
| MS.gene57196.t1 | MTR_1g016360 | 47.205 | 161 | 84 | 1 | 66 | 225 | 50 | 210 | 5.20e-43 | 148 |
| MS.gene57196.t1 | MTR_1g016360 | 44.853 | 136 | 74 | 1 | 66 | 200 | 50 | 185 | 8.12e-34 | 122 |
| MS.gene57196.t1 | MTR_1g016360 | 39.496 | 119 | 71 | 1 | 66 | 183 | 50 | 168 | 8.97e-23 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57196.t1 | AT5G67370 | 67.584 | 327 | 91 | 3 | 1 | 312 | 1 | 327 | 2.12e-147 | 417 |
| MS.gene57196.t1 | AT5G11840 | 39.764 | 254 | 138 | 7 | 12 | 262 | 11 | 252 | 5.90e-47 | 159 |
| MS.gene57196.t1 | AT5G11840 | 42.079 | 202 | 105 | 5 | 12 | 210 | 11 | 203 | 1.02e-40 | 141 |
| MS.gene57196.t1 | AT5G11840 | 43.684 | 190 | 95 | 5 | 12 | 198 | 11 | 191 | 7.27e-40 | 139 |
| MS.gene57196.t1 | AT5G11840 | 39.655 | 174 | 93 | 5 | 12 | 182 | 11 | 175 | 3.12e-29 | 111 |
Find 78 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAAGTTAAGGCCATAAA+AGG | 0.256213 | 5.3:+8900130 | MS.gene57196:CDS |
| GATTGTCTTGAGGATATATC+TGG | 0.307364 | 5.3:+8901050 | MS.gene57196:CDS |
| AACGAACCATGGTTGCTTCC+CGG | 0.333037 | 5.3:-8900061 | None:intergenic |
| GCTGTATTCATGGGGAGAAC+TGG | 0.347057 | 5.3:+8900701 | MS.gene57196:CDS |
| CTAAAGCTTGCAGCTGCAAT+TGG | 0.364895 | 5.3:-8900789 | None:intergenic |
| AAATTCGCACTTACTCTAGA+AGG | 0.375714 | 5.3:-8900813 | None:intergenic |
| GGAGAAACAAGTGGATCTTC+AGG | 0.375718 | 5.3:+8900163 | MS.gene57196:CDS |
| TGCTTCAGCAATTTAACAAC+TGG | 0.384909 | 5.3:-8902059 | None:intergenic |
| ACGGGTTTCCATTAAAGTTA+AGG | 0.392385 | 5.3:+8900120 | MS.gene57196:CDS |
| TACCATCCACTTTCTTCATA+AGG | 0.394550 | 5.3:-8901393 | None:intergenic |
| GATCCTCCCATTTGCAGTAC+TGG | 0.400519 | 5.3:-8902441 | None:intergenic |
| CATACCGGTCTTTGCTCAAA+AGG | 0.406196 | 5.3:-8900220 | None:intergenic |
| GGGTCGTTCTTTCTTCGCCT+TGG | 0.406243 | 5.3:+8900729 | MS.gene57196:CDS |
| TCATGGGGAGAACTGGGTCC+AGG | 0.410922 | 5.3:+8900708 | MS.gene57196:CDS |
| GTGGATCTTCAGGAGGTAGC+TGG | 0.417633 | 5.3:+8900173 | MS.gene57196:CDS |
| TTGCTGAAGCAAACTCTAGT+TGG | 0.417913 | 5.3:+8902071 | MS.gene57196:CDS |
| TCTTGCAGCTGCTGCTGCTG+AGG | 0.421207 | 5.3:+8902360 | MS.gene57196:CDS |
| AACTGCAAGACAAACTAAAC+CGG | 0.436110 | 5.3:+8900042 | MS.gene57196:CDS |
| GCTGCTGCTGAGGCTGCAGA+TGG | 0.438479 | 5.3:+8902370 | MS.gene57196:CDS |
| CAGGAGGCCAGTACTGCAAA+TGG | 0.438936 | 5.3:+8902434 | MS.gene57196:CDS |
| TTCTTCGCCTTGGAGGTCTC+TGG | 0.439796 | 5.3:+8900739 | MS.gene57196:CDS |
| TTTATACTAGCTGCTGGAAC+AGG | 0.441314 | 5.3:+8901006 | MS.gene57196:CDS |
| TTGTACTTTGTGTTGACCTT+GGG | 0.445992 | 5.3:-8902206 | None:intergenic |
| CCTAGCTCGTGATAGATTGT+TGG | 0.448412 | 5.3:+8901892 | MS.gene57196:CDS |
| CTAGCTCGTGATAGATTGTT+GGG | 0.458803 | 5.3:+8901893 | MS.gene57196:CDS |
| GGGACTTCAATTTCCAATCC+AGG | 0.460451 | 5.3:-8900199 | None:intergenic |
| GGTTTAGTTTGTCTTGCAGT+TGG | 0.461505 | 5.3:-8900040 | None:intergenic |
| TCAGGAGGTAGCTGGGATCC+TGG | 0.464576 | 5.3:+8900181 | MS.gene57196:CDS |
| TTGGCAGTGTTCACAGTGCT+TGG | 0.468253 | 5.3:+8900762 | MS.gene57196:CDS |
| AGGATGGAATGCTGTATTCA+TGG | 0.479665 | 5.3:+8900691 | MS.gene57196:CDS |
| TAGATTGTTGGGCTCTTACA+AGG | 0.485638 | 5.3:+8901904 | MS.gene57196:CDS |
| AACCTATCTCTACAGTATAC+TGG | 0.487242 | 5.3:-8902397 | None:intergenic |
| ACTGGAGCATTGCTTGTCAC+TGG | 0.490569 | 5.3:+8902095 | MS.gene57196:CDS |
| TGCTGAAGCAAACTCTAGTT+GGG | 0.491191 | 5.3:+8902072 | MS.gene57196:CDS |
| TCGTTCTTTCTTCGCCTTGG+AGG | 0.501822 | 5.3:+8900732 | MS.gene57196:CDS |
| GTTGTACTTTGTGTTGACCT+TGG | 0.506897 | 5.3:-8902207 | None:intergenic |
| CTGTATTCATGGGGAGAACT+GGG | 0.507278 | 5.3:+8900702 | MS.gene57196:CDS |
| GTCATTCCTTATGAAGAAAG+TGG | 0.511705 | 5.3:+8901387 | MS.gene57196:CDS |
| TCGTCCGCTTTCACATCTGC+AGG | 0.511726 | 5.3:-8902334 | None:intergenic |
| GCCATAAAAGGTGAGATGAA+TGG | 0.514026 | 5.3:+8900142 | MS.gene57196:CDS |
| CTGAGATTTATACTAGCTGC+TGG | 0.524640 | 5.3:+8901000 | MS.gene57196:CDS |
| AAATGAGTACTCATCTTTGA+AGG | 0.527068 | 5.3:+8900671 | MS.gene57196:CDS |
| AAGCAAACTCTAGTTGGGAC+TGG | 0.534146 | 5.3:+8902077 | MS.gene57196:CDS |
| GACCAGTATACTGTAGAGAT+AGG | 0.539279 | 5.3:+8902395 | MS.gene57196:CDS |
| AGGTAGCTGGGATCCTGGAT+TGG | 0.543722 | 5.3:+8900186 | MS.gene57196:CDS |
| TGGATCTTCAGGAGGTAGCT+GGG | 0.548745 | 5.3:+8900174 | MS.gene57196:CDS |
| TTGTGTCTTTGATTGTCTTG+AGG | 0.548909 | 5.3:+8901040 | MS.gene57196:CDS |
| GAGTACTCATCTTTGAAGGA+TGG | 0.549927 | 5.3:+8900675 | MS.gene57196:CDS |
| GTTGACCTTGGGAACTTGAA+CGG | 0.554757 | 5.3:-8902195 | None:intergenic |
| ATACCGGTCTTTGCTCAAAA+GGG | 0.558808 | 5.3:-8900219 | None:intergenic |
| AGGAGGCCAGTACTGCAAAT+GGG | 0.560894 | 5.3:+8902435 | MS.gene57196:CDS |
| GAATGAAGAAAATTCTCCAC+TGG | 0.565797 | 5.3:-8902143 | None:intergenic |
| CCAACAATCTATCACGAGCT+AGG | 0.567433 | 5.3:-8901892 | None:intergenic |
| ATTTATCTTTGCTACACCAG+TGG | 0.569868 | 5.3:+8902127 | MS.gene57196:CDS |
| TCGCCTTGGAGGTCTCTGGT+TGG | 0.574053 | 5.3:+8900743 | MS.gene57196:CDS |
| GAAGAAAGTGGATGGTATGA+CGG | 0.576103 | 5.3:+8901399 | MS.gene57196:CDS |
| TCAACACAAAGTACAACCTA+AGG | 0.579328 | 5.3:+8902213 | MS.gene57196:CDS |
| GGATGGAATGCTGTATTCAT+GGG | 0.587098 | 5.3:+8900692 | MS.gene57196:CDS |
| CATGGGGAGAACTGGGTCCA+GGG | 0.587436 | 5.3:+8900709 | MS.gene57196:CDS |
| ATCAACCGTTCAAGTTCCCA+AGG | 0.607453 | 5.3:+8902190 | MS.gene57196:CDS |
| TTCCTTATGAAGAAAGTGGA+TGG | 0.609524 | 5.3:+8901391 | MS.gene57196:CDS |
| ATGCAGGGGTGGAGTTATGT+TGG | 0.613989 | 5.3:+8901345 | MS.gene57196:intron |
| AGGCGAAGAAAGAACGACCC+TGG | 0.620568 | 5.3:-8900726 | None:intergenic |
| ACTAAACCGGGAAGCAACCA+TGG | 0.621555 | 5.3:+8900055 | MS.gene57196:CDS |
| TAATGTGTACTGTAGAAAGG+AGG | 0.641199 | 5.3:+8902297 | MS.gene57196:intron |
| TTTGGATGATGAACGAACCA+TGG | 0.644971 | 5.3:-8900072 | None:intergenic |
| ACTGCAAGACAAACTAAACC+GGG | 0.646464 | 5.3:+8900043 | MS.gene57196:CDS |
| ATTGCCTGCAGATGTGAAAG+CGG | 0.647332 | 5.3:+8902330 | MS.gene57196:CDS |
| GATGTGGGTCAAGCCGCCCG+AGG | 0.654400 | 5.3:+8901425 | MS.gene57196:CDS |
| ATGGTATGACGGACAGATGT+GGG | 0.654790 | 5.3:+8901410 | MS.gene57196:CDS |
| GAGATGAATGGAGAAACAAG+TGG | 0.659434 | 5.3:+8900154 | MS.gene57196:CDS |
| GTTAAGAGACTAACCTCGGG+CGG | 0.670418 | 5.3:-8901438 | None:intergenic |
| CTGCCAACCAGAGACCTCCA+AGG | 0.677013 | 5.3:-8900746 | None:intergenic |
| AGGCCAGTACTGCAAATGGG+AGG | 0.682389 | 5.3:+8902438 | MS.gene57196:CDS |
| GATGGTATGACGGACAGATG+TGG | 0.687282 | 5.3:+8901409 | MS.gene57196:CDS |
| GATGGAATGCTGTATTCATG+GGG | 0.687693 | 5.3:+8900693 | MS.gene57196:CDS |
| GAAACAAGTGGATCTTCAGG+AGG | 0.690118 | 5.3:+8900166 | MS.gene57196:CDS |
| GCAGCTAGTATAAATCTCAG+AGG | 0.718109 | 5.3:-8900997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAGAAAAAATCAAAATAT+TGG | + | chr5.3:8900434-8900453 | MS.gene57196:intron | 15.0% |
| !!! | TATAAGAAACATTTTTTAGT+GGG | - | chr5.3:8900610-8900629 | None:intergenic | 15.0% |
| !!! | TTATAAGAAACATTTTTTAG+TGG | - | chr5.3:8900611-8900630 | None:intergenic | 15.0% |
| !! | AAATAAACTTTGATATTGCA+TGG | + | chr5.3:8900309-8900328 | MS.gene57196:intron | 20.0% |
| !! | AAGTATATGTGTATAATGAT+TGG | + | chr5.3:8900838-8900857 | MS.gene57196:intron | 20.0% |
| !! | AGTATATGTGTATAATGATT+GGG | + | chr5.3:8900839-8900858 | MS.gene57196:intron | 20.0% |
| !! | ATATTAGAGTATGTATTTCA+TGG | + | chr5.3:8900467-8900486 | MS.gene57196:intron | 20.0% |
| !! | ATGCAATATCAAAGTTTATT+TGG | - | chr5.3:8900310-8900329 | None:intergenic | 20.0% |
| !! | CATTAAAAGTTTCAATGATA+TGG | - | chr5.3:8902282-8902301 | None:intergenic | 20.0% |
| !!! | CTTACAATTTTAAAGACAAA+AGG | - | chr5.3:8901697-8901716 | None:intergenic | 20.0% |
| !!! | GCTTCATTTCTTTAATTTTT+TGG | + | chr5.3:8901835-8901854 | MS.gene57196:intron | 20.0% |
| !!! | TAAAAGAAAGTATCAGAAAA+AGG | + | chr5.3:8900410-8900429 | MS.gene57196:intron | 20.0% |
| !!! | TTTTTACTTTTAGGTAAAAG+AGG | - | chr5.3:8901479-8901498 | None:intergenic | 20.0% |
| ! | AAAAAGAACAGAGATAGAAA+GGG | + | chr5.3:8900365-8900384 | MS.gene57196:intron | 25.0% |
| ! | ACTCATTAAGCTGAATAATT+AGG | + | chr5.3:8901959-8901978 | MS.gene57196:intron | 25.0% |
| ! | ATCCCAATCATTTCATTATT+GGG | + | chr5.3:8901102-8901121 | MS.gene57196:intron | 25.0% |
| ! | ATTAAAGTTAAGGCCATAAA+AGG | + | chr5.3:8900130-8900149 | MS.gene57196:CDS | 25.0% |
| ! | TAAAAAGAACAGAGATAGAA+AGG | + | chr5.3:8900364-8900383 | MS.gene57196:intron | 25.0% |
| ! | TAAAAGTTTCAATGATATGG+TGG | - | chr5.3:8902279-8902298 | None:intergenic | 25.0% |
| ! | TATAACATTTCATGCTAACT+TGG | + | chr5.3:8900626-8900645 | MS.gene57196:intron | 25.0% |
| ! | TTTATTGCATTTAACCTAGT+GGG | + | chr5.3:8901196-8901215 | MS.gene57196:intron | 25.0% |
| !! | TTTTAATGTGTACTGTAGAA+AGG | + | chr5.3:8902294-8902313 | MS.gene57196:intron | 25.0% |
| !!! | GGACTTTTGTTTTTACTTTT+AGG | - | chr5.3:8901488-8901507 | None:intergenic | 25.0% |
| !!! | GTCTTTAAAATTGTAAGAGA+TGG | + | chr5.3:8901700-8901719 | MS.gene57196:intron | 25.0% |
| !!! | TATATTGAGTTGAAGACATT+AGG | - | chr5.3:8901270-8901289 | None:intergenic | 25.0% |
| !!! | TTTTATGGCCTTAACTTTAA+TGG | - | chr5.3:8900131-8900150 | None:intergenic | 25.0% |
| AAATGAGTACTCATCTTTGA+AGG | + | chr5.3:8900671-8900690 | MS.gene57196:CDS | 30.0% | |
| AACCTATTGTTTATTCTCTC+TGG | - | chr5.3:8901670-8901689 | None:intergenic | 30.0% | |
| ACAAGCAGTCTATTCAAAAT+TGG | + | chr5.3:8901737-8901756 | MS.gene57196:intron | 30.0% | |
| ACTGTGGTTAAGAAATTAAC+TGG | + | chr5.3:8901316-8901335 | MS.gene57196:intron | 30.0% | |
| ATCCCCAATAATGAAATGAT+TGG | - | chr5.3:8901108-8901127 | None:intergenic | 30.0% | |
| ATTTCATTATTGGGGATCAT+GGG | + | chr5.3:8901111-8901130 | MS.gene57196:intron | 30.0% | |
| CATCCCAATCATTTCATTAT+TGG | + | chr5.3:8901101-8901120 | MS.gene57196:intron | 30.0% | |
| CTTTATTGCATTTAACCTAG+TGG | + | chr5.3:8901195-8901214 | MS.gene57196:intron | 30.0% | |
| GAGAGAATAAACAATAGGTT+AGG | + | chr5.3:8901670-8901689 | MS.gene57196:intron | 30.0% | |
| TACTCGACAAAATCAATTAC+TGG | + | chr5.3:8901581-8901600 | MS.gene57196:intron | 30.0% | |
| TCCCAATCATTTCATTATTG+GGG | + | chr5.3:8901103-8901122 | MS.gene57196:intron | 30.0% | |
| TCCCCAATAATGAAATGATT+GGG | - | chr5.3:8901107-8901126 | None:intergenic | 30.0% | |
| TTAGATAAAGACAAGACCAT+TGG | + | chr5.3:8901609-8901628 | MS.gene57196:intron | 30.0% | |
| TTGATATTGCATGGTGTAAT+AGG | + | chr5.3:8900318-8900337 | MS.gene57196:intron | 30.0% | |
| TTGTCTACATACATACATAC+CGG | - | chr5.3:8900238-8900257 | None:intergenic | 30.0% | |
| ! | AGCTTCAAAATTTTCTCAAC+GGG | + | chr5.3:8900102-8900121 | MS.gene57196:CDS | 30.0% |
| ! | ATTTAACAACTGGTTTAACC+TGG | - | chr5.3:8902052-8902071 | None:intergenic | 30.0% |
| ! | GAGCTTCAAAATTTTCTCAA+CGG | + | chr5.3:8900101-8900120 | MS.gene57196:CDS | 30.0% |
| !! | GGTTGATTTATTTTCTTCTG+TGG | - | chr5.3:8902177-8902196 | None:intergenic | 30.0% |
| !!! | ATTTTGAAGCTCTTGGATTT+TGG | - | chr5.3:8900093-8900112 | None:intergenic | 30.0% |
| !!! | TGAGAAAATTTTGAAGCTCT+TGG | - | chr5.3:8900100-8900119 | None:intergenic | 30.0% |
| AAAGAAATGAAGCATGTTGC+TGG | - | chr5.3:8901828-8901847 | None:intergenic | 35.0% | |
| AAAGACAAGACCATTGGTAA+AGG | + | chr5.3:8901615-8901634 | MS.gene57196:intron | 35.0% | |
| AAATTCGCACTTACTCTAGA+AGG | - | chr5.3:8900816-8900835 | None:intergenic | 35.0% | |
| AACCTATCTCTACAGTATAC+TGG | - | chr5.3:8902400-8902419 | None:intergenic | 35.0% | |
| AACTGCAAGACAAACTAAAC+CGG | + | chr5.3:8900042-8900061 | MS.gene57196:CDS | 35.0% | |
| AAGCTGAATAATTAGGATGC+AGG | + | chr5.3:8901966-8901985 | MS.gene57196:intron | 35.0% | |
| AATTAACTGGATCACAATGC+AGG | + | chr5.3:8901329-8901348 | MS.gene57196:intron | 35.0% | |
| ACAAAGTACAACCTAAGGTA+AGG | + | chr5.3:8902218-8902237 | MS.gene57196:intron | 35.0% | |
| ACGGGTTTCCATTAAAGTTA+AGG | + | chr5.3:8900120-8900139 | MS.gene57196:CDS | 35.0% | |
| AGAAAGGGAGGATAAAAATG+AGG | + | chr5.3:8900380-8900399 | MS.gene57196:intron | 35.0% | |
| AGCTGAATAATTAGGATGCA+GGG | + | chr5.3:8901967-8901986 | MS.gene57196:intron | 35.0% | |
| AGTACTCCTGAAGATATTGT+AGG | - | chr5.3:8902255-8902274 | None:intergenic | 35.0% | |
| ATTAACTGGATCACAATGCA+GGG | + | chr5.3:8901330-8901349 | MS.gene57196:intron | 35.0% | |
| ATTCAAGGTGTAGATTCACT+GGG | + | chr5.3:8901537-8901556 | MS.gene57196:intron | 35.0% | |
| ATTTATCTTTGCTACACCAG+TGG | + | chr5.3:8902127-8902146 | MS.gene57196:CDS | 35.0% | |
| CACACACATACAAACTGAAA+CGG | + | chr5.3:8900540-8900559 | MS.gene57196:intron | 35.0% | |
| CATTTCATTATTGGGGATCA+TGG | + | chr5.3:8901110-8901129 | MS.gene57196:intron | 35.0% | |
| GAATGAAGAAAATTCTCCAC+TGG | - | chr5.3:8902146-8902165 | None:intergenic | 35.0% | |
| GATTGTCTTGAGGATATATC+TGG | + | chr5.3:8901050-8901069 | MS.gene57196:CDS | 35.0% | |
| GGAATATGTCATGGTCTAAT+AGG | + | chr5.3:8900647-8900666 | MS.gene57196:intron | 35.0% | |
| GTACTCCTGAAGATATTGTA+GGG | - | chr5.3:8902254-8902273 | None:intergenic | 35.0% | |
| GTCATTCCTTATGAAGAAAG+TGG | + | chr5.3:8901387-8901406 | MS.gene57196:CDS | 35.0% | |
| GTCCAGAGAGAATAAACAAT+AGG | + | chr5.3:8901665-8901684 | MS.gene57196:intron | 35.0% | |
| GTGAATCTACACCTTGAATA+TGG | - | chr5.3:8901536-8901555 | None:intergenic | 35.0% | |
| GTGTAATAGGATATTCCCTT+TGG | + | chr5.3:8900331-8900350 | MS.gene57196:intron | 35.0% | |
| TAATGTGTACTGTAGAAAGG+AGG | + | chr5.3:8902297-8902316 | MS.gene57196:intron | 35.0% | |
| TACCATCCACTTTCTTCATA+AGG | - | chr5.3:8901396-8901415 | None:intergenic | 35.0% | |
| TAGGATCTGCAAAGAGAAAT+AGG | - | chr5.3:8901876-8901895 | None:intergenic | 35.0% | |
| TATTCAAGGTGTAGATTCAC+TGG | + | chr5.3:8901536-8901555 | MS.gene57196:intron | 35.0% | |
| TCAACACAAAGTACAACCTA+AGG | + | chr5.3:8902213-8902232 | MS.gene57196:CDS | 35.0% | |
| TGCTAACTTGGAATATGTCA+TGG | + | chr5.3:8900638-8900657 | MS.gene57196:intron | 35.0% | |
| TGCTTCAGCAATTTAACAAC+TGG | - | chr5.3:8902062-8902081 | None:intergenic | 35.0% | |
| TGTTCACACGTAAAAAACTG+TGG | + | chr5.3:8901300-8901319 | MS.gene57196:intron | 35.0% | |
| TTCCTTATGAAGAAAGTGGA+TGG | + | chr5.3:8901391-8901410 | MS.gene57196:CDS | 35.0% | |
| TTGTGTCTTTGATTGTCTTG+AGG | + | chr5.3:8901040-8901059 | MS.gene57196:CDS | 35.0% | |
| TTTCATTATTGGGGATCATG+GGG | + | chr5.3:8901112-8901131 | MS.gene57196:intron | 35.0% | |
| ! | TCCATTCATCTCACCTTTTA+TGG | - | chr5.3:8900146-8900165 | None:intergenic | 35.0% |
| ! | TTGTACTTTGTGTTGACCTT+GGG | - | chr5.3:8902209-8902228 | None:intergenic | 35.0% |
| ! | TTTTAACCTCTCAGTCCAAA+GGG | - | chr5.3:8900349-8900368 | None:intergenic | 35.0% |
| ! | TTTTTAACCTCTCAGTCCAA+AGG | - | chr5.3:8900350-8900369 | None:intergenic | 35.0% |
| !! | CTCAAATTAGCCTTTACCAA+TGG | - | chr5.3:8901628-8901647 | None:intergenic | 35.0% |
| !!! | GTCTTGTTTTTCCTTACCTT+AGG | - | chr5.3:8902232-8902251 | None:intergenic | 35.0% |
| AAATCTCAGAGGTTCCTGTA+AGG | - | chr5.3:8900989-8901008 | None:intergenic | 40.0% | |
| AAGAACAGAGATAGAAAGGG+AGG | + | chr5.3:8900368-8900387 | MS.gene57196:intron | 40.0% | |
| AAGGGAGGATAAAAATGAGG+AGG | + | chr5.3:8900383-8900402 | MS.gene57196:intron | 40.0% | |
| ACTGCAAGACAAACTAAACC+GGG | + | chr5.3:8900043-8900062 | MS.gene57196:CDS | 40.0% | |
| AGAGTTAAGAGACTAACCTC+GGG | - | chr5.3:8901444-8901463 | None:intergenic | 40.0% | |
| AGGATGGAATGCTGTATTCA+TGG | + | chr5.3:8900691-8900710 | MS.gene57196:CDS | 40.0% | |
| ATACCGGTCTTTGCTCAAAA+GGG | - | chr5.3:8900222-8900241 | None:intergenic | 40.0% | |
| CAAGACCCTACAATATCTTC+AGG | + | chr5.3:8902246-8902265 | MS.gene57196:intron | 40.0% | |
| CACATATATTCCTTGTCTCC+AGG | + | chr5.3:8902031-8902050 | MS.gene57196:intron | 40.0% | |
| CTAACTGTCATGCTTTCTGA+TGG | - | chr5.3:8900503-8900522 | None:intergenic | 40.0% | |
| CTAGCTCGTGATAGATTGTT+GGG | + | chr5.3:8901893-8901912 | MS.gene57196:CDS | 40.0% | |
| CTGAGATTTATACTAGCTGC+TGG | + | chr5.3:8901000-8901019 | MS.gene57196:CDS | 40.0% | |
| GAAGAAAGTGGATGGTATGA+CGG | + | chr5.3:8901399-8901418 | MS.gene57196:CDS | 40.0% | |
| GACCAGTATACTGTAGAGAT+AGG | + | chr5.3:8902395-8902414 | MS.gene57196:CDS | 40.0% | |
| GAGAGTTAAGAGACTAACCT+CGG | - | chr5.3:8901445-8901464 | None:intergenic | 40.0% | |
| GAGATGAATGGAGAAACAAG+TGG | + | chr5.3:8900154-8900173 | MS.gene57196:CDS | 40.0% | |
| GAGTGTTTGTGACTACAGAA+GGG | - | chr5.3:8901226-8901245 | None:intergenic | 40.0% | |
| GATGGAATGCTGTATTCATG+GGG | + | chr5.3:8900693-8900712 | MS.gene57196:CDS | 40.0% | |
| GCAGCTAGTATAAATCTCAG+AGG | - | chr5.3:8901000-8901019 | None:intergenic | 40.0% | |
| GCCATAAAAGGTGAGATGAA+TGG | + | chr5.3:8900142-8900161 | MS.gene57196:CDS | 40.0% | |
| GGATGGAATGCTGTATTCAT+GGG | + | chr5.3:8900692-8900711 | MS.gene57196:CDS | 40.0% | |
| GGGATGTGAACATGAAAAAG+AGG | - | chr5.3:8901087-8901106 | None:intergenic | 40.0% | |
| TAGATTGTTGGGCTCTTACA+AGG | + | chr5.3:8901904-8901923 | MS.gene57196:CDS | 40.0% | |
| TCAGTTTGTATGTGTGTGCA+GGG | - | chr5.3:8900538-8900557 | None:intergenic | 40.0% | |
| TGCTGAAGCAAACTCTAGTT+GGG | + | chr5.3:8902072-8902091 | MS.gene57196:CDS | 40.0% | |
| TTAACTGGATCACAATGCAG+GGG | + | chr5.3:8901331-8901350 | MS.gene57196:intron | 40.0% | |
| TTCAGTTTGTATGTGTGTGC+AGG | - | chr5.3:8900539-8900558 | None:intergenic | 40.0% | |
| TTGCTGAAGCAAACTCTAGT+TGG | + | chr5.3:8902071-8902090 | MS.gene57196:CDS | 40.0% | |
| TTTATACTAGCTGCTGGAAC+AGG | + | chr5.3:8901006-8901025 | MS.gene57196:CDS | 40.0% | |
| TTTGGATGATGAACGAACCA+TGG | - | chr5.3:8900075-8900094 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTGTGACTACAGA+AGG | - | chr5.3:8901227-8901246 | None:intergenic | 40.0% |
| ! | CTGTGTTGATGTTACCTTAC+AGG | + | chr5.3:8900972-8900991 | MS.gene57196:intron | 40.0% |
| ! | GAGTACTCATCTTTGAAGGA+TGG | + | chr5.3:8900675-8900694 | MS.gene57196:CDS | 40.0% |
| ! | GTTGTACTTTGTGTTGACCT+TGG | - | chr5.3:8902210-8902229 | None:intergenic | 40.0% |
| ! | TTTTATCGAGCATTAGCAGG+AGG | + | chr5.3:8902418-8902437 | MS.gene57196:CDS | 40.0% |
| !! | AGGTTTTATCGAGCATTAGC+AGG | + | chr5.3:8902415-8902434 | MS.gene57196:CDS | 40.0% |
| !! | GGTTTAGTTTGTCTTGCAGT+TGG | - | chr5.3:8900043-8900062 | None:intergenic | 40.0% |
| AAGCAAACTCTAGTTGGGAC+TGG | + | chr5.3:8902077-8902096 | MS.gene57196:CDS | 45.0% | |
| ACTCTGTTGTTGCCAGAATG+TGG | + | chr5.3:8901242-8901261 | MS.gene57196:intron | 45.0% | |
| AGACATTAGGCACCACATTC+TGG | - | chr5.3:8901257-8901276 | None:intergenic | 45.0% | |
| ATTGCCTGCAGATGTGAAAG+CGG | + | chr5.3:8902330-8902349 | MS.gene57196:CDS | 45.0% | |
| CATACCGGTCTTTGCTCAAA+AGG | - | chr5.3:8900223-8900242 | None:intergenic | 45.0% | |
| CCAACAATCTATCACGAGCT+AGG | - | chr5.3:8901895-8901914 | None:intergenic | 45.0% | |
| CCTAGCTCGTGATAGATTGT+TGG | + | chr5.3:8901892-8901911 | MS.gene57196:CDS | 45.0% | |
| CCTGCGCAAAACCATATTCA+AGG | + | chr5.3:8901522-8901541 | MS.gene57196:intron | 45.0% | |
| CTAAAGCTTGCAGCTGCAAT+TGG | - | chr5.3:8900792-8900811 | None:intergenic | 45.0% | |
| CTGTATTCATGGGGAGAACT+GGG | + | chr5.3:8900702-8900721 | MS.gene57196:CDS | 45.0% | |
| GAAACAAGTGGATCTTCAGG+AGG | + | chr5.3:8900166-8900185 | MS.gene57196:CDS | 45.0% | |
| GATATTCCCTTTGGACTGAG+AGG | + | chr5.3:8900340-8900359 | MS.gene57196:intron | 45.0% | |
| GGAGAAACAAGTGGATCTTC+AGG | + | chr5.3:8900163-8900182 | MS.gene57196:CDS | 45.0% | |
| GGGACTTCAATTTCCAATCC+AGG | - | chr5.3:8900202-8900221 | None:intergenic | 45.0% | |
| GTTGACCTTGGGAACTTGAA+CGG | - | chr5.3:8902198-8902217 | None:intergenic | 45.0% | |
| TGTCATGCTTTCTGATGGCT+TGG | - | chr5.3:8900498-8900517 | None:intergenic | 45.0% | |
| TTCACTGGGACATAGCAAGT+AGG | + | chr5.3:8901551-8901570 | MS.gene57196:intron | 45.0% | |
| ! | ACTGGTTTAACCTGGAGACA+AGG | - | chr5.3:8902044-8902063 | None:intergenic | 45.0% |
| ! | AGTCCCTTTTGAGCAAAGAC+CGG | + | chr5.3:8900216-8900235 | MS.gene57196:CDS | 45.0% |
| ! | ATCAACCGTTCAAGTTCCCA+AGG | + | chr5.3:8902190-8902209 | MS.gene57196:CDS | 45.0% |
| !! | ATGGTATGACGGACAGATGT+GGG | + | chr5.3:8901410-8901429 | MS.gene57196:CDS | 45.0% |
| !! | CCTTGAATATGGTTTTGCGC+AGG | - | chr5.3:8901525-8901544 | None:intergenic | 45.0% |
| AACGAACCATGGTTGCTTCC+CGG | - | chr5.3:8900064-8900083 | None:intergenic | 50.0% | |
| ACTAAACCGGGAAGCAACCA+TGG | + | chr5.3:8900055-8900074 | MS.gene57196:CDS | 50.0% | |
| AGGAGGCCAGTACTGCAAAT+GGG | + | chr5.3:8902435-8902454 | MS.gene57196:CDS | 50.0% | |
| ATGCAGGGGTGGAGTTATGT+TGG | + | chr5.3:8901345-8901364 | MS.gene57196:intron | 50.0% | |
| GATCCTCCCATTTGCAGTAC+TGG | - | chr5.3:8902444-8902463 | None:intergenic | 50.0% | |
| GCTGTATTCATGGGGAGAAC+TGG | + | chr5.3:8900701-8900720 | MS.gene57196:CDS | 50.0% | |
| GTTAAGAGACTAACCTCGGG+CGG | - | chr5.3:8901441-8901460 | None:intergenic | 50.0% | |
| TACAGAAGGGAGTTCCCACT+AGG | - | chr5.3:8901213-8901232 | None:intergenic | 50.0% | |
| TCGTTCTTTCTTCGCCTTGG+AGG | + | chr5.3:8900732-8900751 | MS.gene57196:CDS | 50.0% | |
| TGGATCTTCAGGAGGTAGCT+GGG | + | chr5.3:8900174-8900193 | MS.gene57196:CDS | 50.0% | |
| TTGGCAGTGTTCACAGTGCT+TGG | + | chr5.3:8900762-8900781 | MS.gene57196:CDS | 50.0% | |
| !! | ACTGGAGCATTGCTTGTCAC+TGG | + | chr5.3:8902095-8902114 | MS.gene57196:CDS | 50.0% |
| !! | GATGGTATGACGGACAGATG+TGG | + | chr5.3:8901409-8901428 | MS.gene57196:CDS | 50.0% |
| ACTGGATCACAATGCAGGGG+TGG | + | chr5.3:8901334-8901353 | MS.gene57196:intron | 55.0% | |
| AGGCCAGTACTGCAAATGGG+AGG | + | chr5.3:8902438-8902457 | MS.gene57196:CDS | 55.0% | |
| AGGCGAAGAAAGAACGACCC+TGG | - | chr5.3:8900729-8900748 | None:intergenic | 55.0% | |
| AGGTAGCTGGGATCCTGGAT+TGG | + | chr5.3:8900186-8900205 | MS.gene57196:CDS | 55.0% | |
| CAGGAGGCCAGTACTGCAAA+TGG | + | chr5.3:8902434-8902453 | MS.gene57196:CDS | 55.0% | |
| GCGCAGGTGAAGTCTTCAGA+GGG | - | chr5.3:8901509-8901528 | None:intergenic | 55.0% | |
| GGGTCGTTCTTTCTTCGCCT+TGG | + | chr5.3:8900729-8900748 | MS.gene57196:CDS | 55.0% | |
| GTGGATCTTCAGGAGGTAGC+TGG | + | chr5.3:8900173-8900192 | MS.gene57196:CDS | 55.0% | |
| TCGTCCGCTTTCACATCTGC+AGG | - | chr5.3:8902337-8902356 | None:intergenic | 55.0% | |
| TGCGCAGGTGAAGTCTTCAG+AGG | - | chr5.3:8901510-8901529 | None:intergenic | 55.0% | |
| TTCTTCGCCTTGGAGGTCTC+TGG | + | chr5.3:8900739-8900758 | MS.gene57196:CDS | 55.0% | |
| CATGGGGAGAACTGGGTCCA+GGG | + | chr5.3:8900709-8900728 | MS.gene57196:CDS | 60.0% | |
| CTGCCAACCAGAGACCTCCA+AGG | - | chr5.3:8900749-8900768 | None:intergenic | 60.0% | |
| TCAGGAGGTAGCTGGGATCC+TGG | + | chr5.3:8900181-8900200 | MS.gene57196:CDS | 60.0% | |
| TCATGGGGAGAACTGGGTCC+AGG | + | chr5.3:8900708-8900727 | MS.gene57196:CDS | 60.0% | |
| TCGCCTTGGAGGTCTCTGGT+TGG | + | chr5.3:8900743-8900762 | MS.gene57196:CDS | 60.0% | |
| TCTTGCAGCTGCTGCTGCTG+AGG | + | chr5.3:8902360-8902379 | MS.gene57196:CDS | 60.0% | |
| TGGGGATCATGGGGTGAGCA+AGG | + | chr5.3:8901121-8901140 | MS.gene57196:intron | 60.0% | |
| GCTGCTGCTGAGGCTGCAGA+TGG | + | chr5.3:8902370-8902389 | MS.gene57196:CDS | 65.0% | |
| GATGTGGGTCAAGCCGCCCG+AGG | + | chr5.3:8901425-8901444 | MS.gene57196:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8900007 | 8902474 | 8900007 | ID=MS.gene57196 |
| chr5.3 | mRNA | 8900007 | 8902474 | 8900007 | ID=MS.gene57196.t1;Parent=MS.gene57196 |
| chr5.3 | exon | 8900007 | 8900237 | 8900007 | ID=MS.gene57196.t1.exon1;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8900007 | 8900237 | 8900007 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8900669 | 8900821 | 8900669 | ID=MS.gene57196.t1.exon2;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8900669 | 8900821 | 8900669 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8900994 | 8901071 | 8900994 | ID=MS.gene57196.t1.exon3;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8900994 | 8901071 | 8900994 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8901351 | 8901446 | 8901351 | ID=MS.gene57196.t1.exon4;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8901351 | 8901446 | 8901351 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8901890 | 8901925 | 8901890 | ID=MS.gene57196.t1.exon5;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8901890 | 8901925 | 8901890 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8902053 | 8902234 | 8902053 | ID=MS.gene57196.t1.exon6;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8902053 | 8902234 | 8902053 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| chr5.3 | exon | 8902312 | 8902474 | 8902312 | ID=MS.gene57196.t1.exon7;Parent=MS.gene57196.t1 |
| chr5.3 | CDS | 8902312 | 8902474 | 8902312 | ID=cds.MS.gene57196.t1;Parent=MS.gene57196.t1 |
| Gene Sequence |
| Protein sequence |
