Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67013.t1 | XP_013451624.1 | 97.9 | 242 | 2 | 1 | 1 | 239 | 1 | 242 | 4.20E-134 | 487.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67013.t1 | Q01667 | 82.8 | 239 | 39 | 2 | 1 | 237 | 1 | 239 | 4.1e-114 | 412.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67013.t1 | A0A072U7I8 | 97.9 | 242 | 2 | 1 | 1 | 239 | 1 | 242 | 3.0e-134 | 487.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene67013 | 0.823355 | 1.45E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene67013 | 0.834671 | 2.62E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene67013 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene67013 | 0.848107 | 7.56E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene67013 | 0.85256 | 4.26E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene67013 | 0.844994 | 5.35E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene67013 | 0.833509 | 5.12E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene67013 | 0.804497 | 2.10E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene67013 | 0.837136 | 6.21E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene67013 | 0.834199 | 3.44E-56 | -1.69E-46 |
| MS.gene050502 | MS.gene67013 | 0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene67013 | 0.836203 | 1.07E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene67013 | 0.845788 | 3.26E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene67013 | 0.826402 | 2.77E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene67013 | 0.824616 | 7.33E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene67013 | 0.830148 | 3.46E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene67013 | 0.842669 | 2.25E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene67013 | 0.844213 | 8.69E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene67013 | 0.864622 | 1.06E-64 | -1.69E-46 |
| MS.gene050747 | MS.gene67013 | 0.855661 | 5.43E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene67013 | 0.857695 | 1.37E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene67013 | 0.810993 | 8.74E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene67013 | 0.873542 | 1.36E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene67013 | 0.863989 | 1.68E-64 | -1.69E-46 |
| MS.gene051317 | MS.gene67013 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene67013 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene67013 | 0.835734 | 1.41E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene67013 | 0.8257 | 4.06E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene67013 | 0.826669 | 2.39E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene67013 | 0.815215 | 1.04E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene67013 | 0.820368 | 7.12E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene67013 | 0.814654 | 1.38E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene67013 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene67013 | 0.808079 | 3.69E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene67013 | 0.85087 | 1.28E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene67013 | 0.879913 | 8.45E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene67013 | 0.882606 | 9.05E-71 | -1.69E-46 |
| MS.gene053436 | MS.gene67013 | 0.865651 | 5.06E-65 | -1.69E-46 |
| MS.gene053479 | MS.gene67013 | 0.817835 | 2.68E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene67013 | 0.884629 | 1.63E-71 | -1.69E-46 |
| MS.gene053626 | MS.gene67013 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene67013 | 0.830009 | 3.74E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene67013 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene67013 | 0.824417 | 8.17E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene67013 | 0.83609 | 1.15E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene67013 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene67013 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene67013 | 0.854496 | 1.18E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene67013 | 0.851307 | 9.66E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene67013 | 0.833399 | 5.45E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene67013 | 0.815067 | 1.12E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene67013 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene67013 | 0.815661 | 8.25E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene67013 | 0.810118 | 1.35E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene67013 | 0.80806 | 3.73E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene67013 | 0.822643 | 2.12E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene67013 | 0.853725 | 1.98E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene67013 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene67013 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene67013 | 0.829034 | 6.45E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene67013 | 0.841026 | 6.10E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene67013 | 0.840847 | 6.79E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene67013 | 0.856971 | 2.24E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene67013 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene67013 | 0.80035 | 1.50E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene67013 | 0.86827 | 7.40E-66 | -1.69E-46 |
| MS.gene057416 | MS.gene67013 | 0.829983 | 3.79E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene67013 | 0.808582 | 2.89E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene67013 | 0.847622 | 1.03E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene67013 | 0.8309 | 2.26E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene67013 | 0.828067 | 1.10E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene67013 | 0.872134 | 4.02E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene67013 | 0.838612 | 2.59E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene67013 | 0.855483 | 6.12E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene67013 | 0.832728 | 8.01E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene67013 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene05883 | MS.gene67013 | 0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene67013 | 0.841205 | 5.47E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene67013 | 0.844331 | 8.08E-59 | -1.69E-46 |
| MS.gene059181 | MS.gene67013 | 0.83192 | 1.27E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene67013 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene67013 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene67013 | 0.840215 | 9.94E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene67013 | 0.820147 | 8.00E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene67013 | 0.812084 | 5.07E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene67013 | 0.837884 | 3.99E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene67013 | 0.81038 | 1.19E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene67013 | 0.863679 | 2.10E-64 | -1.69E-46 |
| MS.gene060835 | MS.gene67013 | 0.812966 | 3.25E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene67013 | 0.841208 | 5.46E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene67013 | 0.841068 | 5.95E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene67013 | 0.817551 | 3.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67013.t1 | MTR_6g033320 | 97.934 | 242 | 2 | 1 | 1 | 239 | 1 | 242 | 9.15e-176 | 483 |
| MS.gene67013.t1 | MTR_4g015570 | 37.743 | 257 | 109 | 6 | 22 | 231 | 30 | 282 | 3.18e-45 | 153 |
| MS.gene67013.t1 | MTR_3g435460 | 37.970 | 266 | 117 | 10 | 1 | 235 | 1 | 249 | 2.59e-42 | 144 |
| MS.gene67013.t1 | MTR_8g023790 | 40.758 | 211 | 97 | 7 | 46 | 237 | 66 | 267 | 1.07e-41 | 143 |
| MS.gene67013.t1 | MTR_3g101670 | 38.565 | 223 | 105 | 7 | 33 | 235 | 52 | 262 | 5.11e-41 | 141 |
| MS.gene67013.t1 | MTR_2g042720 | 40.976 | 205 | 93 | 7 | 46 | 231 | 65 | 260 | 2.44e-40 | 139 |
| MS.gene67013.t1 | MTR_6g060175 | 38.743 | 191 | 107 | 3 | 53 | 235 | 91 | 279 | 2.65e-37 | 132 |
| MS.gene67013.t1 | MTR_5g098780 | 37.959 | 245 | 116 | 9 | 16 | 231 | 31 | 268 | 2.51e-36 | 129 |
| MS.gene67013.t1 | MTR_4g094605 | 43.147 | 197 | 91 | 7 | 49 | 230 | 64 | 254 | 3.72e-36 | 129 |
| MS.gene67013.t1 | MTR_6g011890 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 3.87e-36 | 129 |
| MS.gene67013.t1 | MTR_6g011870 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 4.26e-36 | 129 |
| MS.gene67013.t1 | MTR_6g011880 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 4.63e-36 | 128 |
| MS.gene67013.t1 | MTR_3g435460 | 40.206 | 194 | 86 | 6 | 59 | 235 | 8 | 188 | 5.24e-36 | 126 |
| MS.gene67013.t1 | MTR_6g012110 | 41.885 | 191 | 95 | 6 | 53 | 230 | 66 | 253 | 9.67e-36 | 127 |
| MS.gene67013.t1 | MTR_6g012080 | 41.969 | 193 | 92 | 6 | 53 | 230 | 66 | 253 | 1.05e-35 | 127 |
| MS.gene67013.t1 | MTR_5g098785 | 38.710 | 248 | 112 | 10 | 16 | 231 | 31 | 270 | 5.10e-35 | 126 |
| MS.gene67013.t1 | MTR_5g097280 | 39.474 | 228 | 100 | 9 | 36 | 230 | 31 | 253 | 9.73e-35 | 125 |
| MS.gene67013.t1 | MTR_1g026550 | 39.000 | 200 | 100 | 6 | 53 | 231 | 125 | 323 | 9.53e-34 | 124 |
| MS.gene67013.t1 | MTR_6g043600 | 40.860 | 186 | 84 | 6 | 53 | 230 | 50 | 217 | 8.61e-32 | 116 |
| MS.gene67013.t1 | MTR_3g070340 | 34.545 | 220 | 96 | 5 | 46 | 221 | 60 | 275 | 7.79e-31 | 115 |
| MS.gene67013.t1 | MTR_6g060175 | 36.126 | 191 | 102 | 4 | 53 | 235 | 91 | 269 | 3.86e-30 | 113 |
| MS.gene67013.t1 | MTR_2g081090 | 37.104 | 221 | 110 | 9 | 36 | 230 | 35 | 252 | 7.03e-30 | 112 |
| MS.gene67013.t1 | MTR_2g081090 | 38.860 | 193 | 100 | 8 | 53 | 230 | 36 | 225 | 1.02e-28 | 108 |
| MS.gene67013.t1 | MTR_2g008610 | 33.846 | 195 | 79 | 6 | 46 | 201 | 60 | 243 | 3.38e-21 | 89.4 |
| MS.gene67013.t1 | MTR_5g098770 | 54.412 | 68 | 29 | 2 | 165 | 231 | 21 | 87 | 3.52e-16 | 72.0 |
| MS.gene67013.t1 | MTR_2g436960 | 46.479 | 71 | 33 | 2 | 165 | 235 | 33 | 98 | 1.30e-12 | 62.8 |
| MS.gene67013.t1 | MTR_0003s0060 | 47.143 | 70 | 32 | 2 | 162 | 231 | 23 | 87 | 1.75e-11 | 59.3 |
| MS.gene67013.t1 | MTR_1g026550 | 41.176 | 85 | 43 | 2 | 53 | 130 | 125 | 209 | 3.38e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67013.t1 | AT3G54890 | 82.845 | 239 | 39 | 2 | 1 | 237 | 1 | 239 | 6.84e-140 | 392 |
| MS.gene67013.t1 | AT3G54890 | 81.122 | 196 | 35 | 2 | 1 | 194 | 1 | 196 | 7.04e-108 | 310 |
| MS.gene67013.t1 | AT3G54890 | 69.456 | 239 | 37 | 3 | 1 | 237 | 1 | 205 | 1.58e-106 | 306 |
| MS.gene67013.t1 | AT3G54890 | 74.684 | 158 | 37 | 3 | 1 | 155 | 1 | 158 | 1.26e-72 | 219 |
| MS.gene67013.t1 | AT3G08940 | 38.113 | 265 | 111 | 7 | 16 | 231 | 20 | 280 | 9.97e-47 | 157 |
| MS.gene67013.t1 | AT3G47470 | 37.452 | 259 | 121 | 8 | 1 | 231 | 1 | 246 | 1.26e-44 | 150 |
| MS.gene67013.t1 | AT5G01530 | 39.496 | 238 | 93 | 6 | 41 | 231 | 50 | 283 | 2.48e-44 | 150 |
| MS.gene67013.t1 | AT3G61470 | 40.284 | 211 | 98 | 7 | 46 | 237 | 55 | 256 | 2.51e-40 | 139 |
| MS.gene67013.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 44 | 236 | 47 | 252 | 2.78e-40 | 139 |
| MS.gene67013.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 44 | 236 | 47 | 252 | 2.78e-40 | 139 |
| MS.gene67013.t1 | AT2G34430 | 44.103 | 195 | 93 | 6 | 49 | 230 | 63 | 254 | 1.44e-38 | 135 |
| MS.gene67013.t1 | AT2G34420 | 44.103 | 195 | 93 | 6 | 49 | 230 | 62 | 253 | 1.58e-38 | 135 |
| MS.gene67013.t1 | AT2G40100 | 38.356 | 219 | 88 | 4 | 46 | 221 | 59 | 273 | 3.27e-38 | 134 |
| MS.gene67013.t1 | AT4G10340 | 39.791 | 191 | 105 | 3 | 53 | 235 | 82 | 270 | 3.52e-38 | 134 |
| MS.gene67013.t1 | AT1G29920 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 3.69e-38 | 134 |
| MS.gene67013.t1 | AT1G29910 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 3.69e-38 | 134 |
| MS.gene67013.t1 | AT1G29930 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 4.06e-38 | 134 |
| MS.gene67013.t1 | AT1G19150 | 39.512 | 205 | 96 | 7 | 46 | 231 | 68 | 263 | 7.45e-38 | 133 |
| MS.gene67013.t1 | AT2G05100 | 41.451 | 193 | 93 | 6 | 53 | 230 | 66 | 253 | 3.79e-35 | 126 |
| MS.gene67013.t1 | AT2G05070 | 41.451 | 193 | 93 | 6 | 53 | 230 | 66 | 253 | 4.04e-35 | 126 |
| MS.gene67013.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 53 | 230 | 99 | 286 | 3.14e-34 | 124 |
| MS.gene67013.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 53 | 230 | 67 | 254 | 3.78e-34 | 124 |
| MS.gene67013.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 46 | 231 | 56 | 266 | 1.41e-33 | 122 |
| MS.gene67013.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 46 | 231 | 56 | 266 | 1.41e-33 | 122 |
| MS.gene67013.t1 | AT1G76570 | 37.000 | 200 | 104 | 6 | 53 | 231 | 123 | 321 | 1.77e-32 | 120 |
| MS.gene67013.t1 | AT5G54270 | 34.766 | 256 | 138 | 8 | 1 | 230 | 1 | 253 | 5.34e-32 | 118 |
| MS.gene67013.t1 | AT1G61520 | 40.594 | 202 | 87 | 9 | 59 | 231 | 14 | 211 | 4.37e-30 | 112 |
| MS.gene67013.t1 | AT2G05100 | 39.645 | 169 | 83 | 5 | 53 | 206 | 66 | 230 | 1.00e-26 | 105 |
| MS.gene67013.t1 | AT1G15820 | 35.165 | 182 | 74 | 6 | 53 | 201 | 70 | 240 | 2.24e-20 | 87.4 |
| MS.gene67013.t1 | AT5G28450 | 53.333 | 75 | 32 | 3 | 165 | 237 | 99 | 172 | 1.94e-15 | 72.0 |
Find 71 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGGACCTTTGGAGAATT+TGG | 0.160780 | 6.2:-23198775 | MS.gene67013:CDS |
| ATGCATGCAGCCAGGGATTT+TGG | 0.202155 | 6.2:-23199661 | MS.gene67013:intron |
| GGTAGGGTGCCCCATGGAAC+AGG | 0.250060 | 6.2:+23199552 | None:intergenic |
| GGGCACCCTACCCACCATTT+TGG | 0.282770 | 6.2:-23199541 | MS.gene67013:CDS |
| TGGATTTGATCCTCTACGTC+TGG | 0.312419 | 6.2:-23200246 | MS.gene67013:CDS |
| CCTAGACCACCTTACCTTGA+TGG | 0.314069 | 6.2:-23200921 | MS.gene67013:CDS |
| TTCTCCAAAGGTCCAGTTCC+TGG | 0.317892 | 6.2:+23198780 | None:intergenic |
| CAGGAATGGGCAGCACTTCC+TGG | 0.319362 | 6.2:-23199600 | MS.gene67013:CDS |
| GTACCAGAGGCATTGGGATT+AGG | 0.338005 | 6.2:-23199639 | MS.gene67013:CDS |
| TGTTGAGCACCAAAGGAGTA+TGG | 0.346828 | 6.2:-23199493 | MS.gene67013:CDS |
| ATTAGGACGTCTTGCTTTGT+TGG | 0.354009 | 6.2:-23198838 | MS.gene67013:intron |
| GGTCTTTCTCCATACTCCTT+TGG | 0.357030 | 6.2:+23199484 | None:intergenic |
| TACCTTGATGGTTCAGCTCC+AGG | 0.367208 | 6.2:-23200909 | MS.gene67013:CDS |
| AGGCATTGGGATTAGGCAAC+TGG | 0.374324 | 6.2:-23199632 | MS.gene67013:CDS |
| ATATCTATTGAGGTGGAATA+AGG | 0.375187 | 6.2:+23198709 | None:intergenic |
| AAGGAATTCAATGACCAAAA+TGG | 0.388111 | 6.2:+23199527 | None:intergenic |
| AGGTAGGTTGCTTGTCCTCC+AGG | 0.409848 | 6.2:+23199582 | None:intergenic |
| GATTCACCATGACTTCTGAT+TGG | 0.414343 | 6.2:-23200956 | MS.gene67013:CDS |
| CCATCAAGGTAAGGTGGTCT+AGG | 0.434279 | 6.2:+23200921 | None:intergenic |
| TTGAATCTCTCAAGATTCTC+AGG | 0.437523 | 6.2:+23200215 | None:intergenic |
| ATGACTTCTGATTGGATGCC+TGG | 0.463135 | 6.2:-23200948 | MS.gene67013:CDS |
| ATATCCAGGAACTGGACCTT+TGG | 0.468791 | 6.2:-23198784 | MS.gene67013:CDS |
| CTGAACTCATTCACTGCAGA+TGG | 0.472063 | 6.2:-23200187 | MS.gene67013:CDS |
| GAAGCATTTGTGCAAGGAAG+TGG | 0.473273 | 6.2:+23200984 | None:intergenic |
| CCTAGGCAACCCTGTTCCAT+GGG | 0.474387 | 6.2:-23199562 | MS.gene67013:CDS |
| ACCTAGGCAACCCTGTTCCA+TGG | 0.483827 | 6.2:-23199563 | MS.gene67013:CDS |
| CTGGGTGAAAGCACAGGAAT+GGG | 0.485329 | 6.2:-23199613 | MS.gene67013:CDS |
| GGAGAATTTGGCAACACACT+TGG | 0.485817 | 6.2:-23198763 | MS.gene67013:CDS |
| ACCTTGATGGTTCAGCTCCA+GGG | 0.491528 | 6.2:-23200908 | MS.gene67013:intron |
| CAAACAGCATATCCAGGAAC+TGG | 0.497647 | 6.2:-23198792 | MS.gene67013:CDS |
| GGATTTGATCCTCTACGTCT+GGG | 0.503278 | 6.2:-23200245 | MS.gene67013:CDS |
| GCTCAACAAAAGCAATAGAA+AGG | 0.508788 | 6.2:+23199508 | None:intergenic |
| GCCTCTGGTACCAAAATCCC+TGG | 0.509037 | 6.2:+23199651 | None:intergenic |
| TTGCCTAATCCCAATGCCTC+TGG | 0.512790 | 6.2:+23199636 | None:intergenic |
| AGGCAACTGGGTGAAAGCAC+AGG | 0.515063 | 6.2:-23199619 | MS.gene67013:CDS |
| TTTGAGGGAGATATCTATTG+AGG | 0.515176 | 6.2:+23198699 | None:intergenic |
| ACTGGGTGAAAGCACAGGAA+TGG | 0.517047 | 6.2:-23199614 | MS.gene67013:CDS |
| TTTGAGGAAGAAAGAAGTGA+TGG | 0.520641 | 6.2:+23201029 | None:intergenic |
| TTTCCAATGTTGTTGTGCCA+TGG | 0.523601 | 6.2:+23198735 | None:intergenic |
| CAATGACCAAAATGGTGGGT+AGG | 0.530752 | 6.2:+23199535 | None:intergenic |
| GATCCATGGCACAACAACAT+TGG | 0.533754 | 6.2:-23198738 | MS.gene67013:CDS |
| AAAATCAAAGAAGTTAAGAA+TGG | 0.539315 | 6.2:-23199384 | MS.gene67013:intron |
| AATGACCAAAATGGTGGGTA+GGG | 0.541785 | 6.2:+23199536 | None:intergenic |
| CAACACACTTGGCTGATCCA+TGG | 0.557652 | 6.2:-23198752 | MS.gene67013:CDS |
| CCCATGGAACAGGGTTGCCT+AGG | 0.565700 | 6.2:+23199562 | None:intergenic |
| GTAGGGTGCCCCATGGAACA+GGG | 0.567362 | 6.2:+23199553 | None:intergenic |
| TAAGGTGGTCTAGGCTGACC+AGG | 0.567668 | 6.2:+23200930 | None:intergenic |
| GGAGGACAAGCAACCTACCT+AGG | 0.572729 | 6.2:-23199579 | MS.gene67013:CDS |
| AAAGGATCAAAAGCACCACC+AGG | 0.573417 | 6.2:+23199444 | None:intergenic |
| GAATTCAATGACCAAAATGG+TGG | 0.574206 | 6.2:+23199530 | None:intergenic |
| TGGAACAGGGTTGCCTAGGT+AGG | 0.576958 | 6.2:+23199566 | None:intergenic |
| GATACTTACAACAGCAAGCA+TGG | 0.578696 | 6.2:+23200163 | None:intergenic |
| AGGCATCCAATCAGAAGTCA+TGG | 0.583801 | 6.2:+23200950 | None:intergenic |
| GGAGCTGAACCATCAAGGTA+AGG | 0.587136 | 6.2:+23200912 | None:intergenic |
| TGAACTCATTCACTGCAGAT+GGG | 0.591140 | 6.2:-23200186 | MS.gene67013:CDS |
| ACCCTGGAGCTGAACCATCA+AGG | 0.592237 | 6.2:+23200907 | None:intergenic |
| GAGGGAGATATCTATTGAGG+TGG | 0.592911 | 6.2:+23198702 | None:intergenic |
| GTTCAACAAACAGCATATCC+AGG | 0.600057 | 6.2:-23198798 | MS.gene67013:CDS |
| GGCATTGGGATTAGGCAACT+GGG | 0.602759 | 6.2:-23199631 | MS.gene67013:CDS |
| CTAGAAGAAGCATTTGTGCA+AGG | 0.615959 | 6.2:+23200978 | None:intergenic |
| TGTGTTGCCAAATTCTCCAA+AGG | 0.630431 | 6.2:+23198768 | None:intergenic |
| AATTCAATGACCAAAATGGT+GGG | 0.634135 | 6.2:+23199531 | None:intergenic |
| GGGTCTTTAGAGTAACCCAA+AGG | 0.636573 | 6.2:+23199426 | None:intergenic |
| ATGGTGGGTAGGGTGCCCCA+TGG | 0.643524 | 6.2:+23199546 | None:intergenic |
| GCTGAACCATCAAGGTAAGG+TGG | 0.647312 | 6.2:+23200915 | None:intergenic |
| GGTACTTCACCCAGACGTAG+AGG | 0.653463 | 6.2:+23200236 | None:intergenic |
| CCTGAAAAGAAGAAGTACCC+TGG | 0.684859 | 6.2:-23199462 | MS.gene67013:CDS |
| CTAGGCAACCCTGTTCCATG+GGG | 0.718085 | 6.2:-23199561 | MS.gene67013:CDS |
| AAGGATCAAAAGCACCACCA+GGG | 0.718614 | 6.2:+23199445 | None:intergenic |
| GAATGGGCAGCACTTCCTGG+AGG | 0.731277 | 6.2:-23199597 | MS.gene67013:CDS |
| GAAAAGAAGAAGTACCCTGG+TGG | 0.742886 | 6.2:-23199459 | MS.gene67013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACCAAAAAAAAAATAA+TGG | + | chr6.2:23198932-23198951 | None:intergenic | 10.0% |
| !!! | TACAAAATAATTTTTTTAAG+AGG | - | chr6.2:23199432-23199451 | MS.gene67013:CDS | 10.0% |
| !!! | TTTTACCATTATTTTTTTTT+TGG | - | chr6.2:23198924-23198943 | MS.gene67013:intron | 10.0% |
| !! | TAACTAAATAAAGGTTTATA+AGG | + | chr6.2:23199161-23199180 | None:intergenic | 15.0% |
| !!! | ACATTTCTGAAAATATTATA+TGG | - | chr6.2:23200844-23200863 | MS.gene67013:intron | 15.0% |
| !!! | ATAATTTTTTTAAGAGGTAA+AGG | - | chr6.2:23199438-23199457 | MS.gene67013:CDS | 15.0% |
| !!! | CAATTTTCTTAACTAAATAA+AGG | + | chr6.2:23199170-23199189 | None:intergenic | 15.0% |
| !!! | TTAATAACGTTCAAATTTTT+TGG | + | chr6.2:23200611-23200630 | None:intergenic | 15.0% |
| !! | AAAATCAAAGAAGTTAAGAA+TGG | - | chr6.2:23200400-23200419 | MS.gene67013:intron | 20.0% |
| !!! | TAGTTTTCAATATCGATATT+AGG | - | chr6.2:23199818-23199837 | MS.gene67013:intron | 20.0% |
| !!! | TGTATTCATGAAACTTTTTA+GGG | + | chr6.2:23200381-23200400 | None:intergenic | 20.0% |
| !!! | TTGTATTCATGAAACTTTTT+AGG | + | chr6.2:23200382-23200401 | None:intergenic | 20.0% |
| ! | ACGTTATTAATCACAATTTC+AGG | - | chr6.2:23200621-23200640 | MS.gene67013:intron | 25.0% |
| ! | ATTTGAATACTTGAAACTCA+TGG | - | chr6.2:23200662-23200681 | MS.gene67013:intron | 25.0% |
| ! | CTTTGTTGAATGTTTGTATT+AGG | - | chr6.2:23200929-23200948 | MS.gene67013:CDS | 25.0% |
| ! | TAAACTCGACAACATTTAAA+TGG | + | chr6.2:23200799-23200818 | None:intergenic | 25.0% |
| ! | TATATAGTATATACATACCC+TGG | + | chr6.2:23198896-23198915 | None:intergenic | 25.0% |
| ! | TTTCAATATCGATATTAGGT+AGG | - | chr6.2:23199822-23199841 | MS.gene67013:intron | 25.0% |
| !! | AGTTGAAAATCTTGATTTTG+AGG | + | chr6.2:23198774-23198793 | None:intergenic | 25.0% |
| !! | GTTGTAAGTATCTCTTTTAT+AGG | - | chr6.2:23199632-23199651 | MS.gene67013:CDS | 25.0% |
| !! | TAATGGACAATCCTAAATTT+AGG | - | chr6.2:23199099-23199118 | MS.gene67013:intron | 25.0% |
| !! | TAGTGTATGAATATTTGTTG+TGG | - | chr6.2:23199494-23199513 | MS.gene67013:CDS | 25.0% |
| !! | TTTTATAGGAAAACCAGTTT+AGG | - | chr6.2:23199646-23199665 | MS.gene67013:CDS | 25.0% |
| !!! | TTTTTTTGTTACAGTGACTT+TGG | - | chr6.2:23199518-23199537 | MS.gene67013:CDS | 25.0% |
| AAGGAATTCAATGACCAAAA+TGG | + | chr6.2:23200260-23200279 | None:intergenic | 30.0% | |
| AATATCTAGACCGTTTGAAA+CGG | - | chr6.2:23199902-23199921 | MS.gene67013:intron | 30.0% | |
| AATTCAATGACCAAAATGGT+GGG | + | chr6.2:23200256-23200275 | None:intergenic | 30.0% | |
| ATCCTAAATTTAGGTGTGTT+TGG | - | chr6.2:23199108-23199127 | MS.gene67013:intron | 30.0% | |
| CAACATTTAAATGGTTAACG+CGG | + | chr6.2:23200790-23200809 | None:intergenic | 30.0% | |
| CATGTGTGACAATATTTAAG+AGG | + | chr6.2:23199056-23199075 | None:intergenic | 30.0% | |
| GTTAAGAAAATTGAAGTCGT+CGG | - | chr6.2:23199177-23199196 | MS.gene67013:intron | 30.0% | |
| TCGATATTAGGTAGGTTTAA+TGG | - | chr6.2:23199830-23199849 | MS.gene67013:intron | 30.0% | |
| TGAAAACTACTATGAAGTAC+TGG | + | chr6.2:23199807-23199826 | None:intergenic | 30.0% | |
| TGTGATTGTTCGATCAAAAT+CGG | - | chr6.2:23199230-23199249 | MS.gene67013:intron | 30.0% | |
| TTAGGTAGGTTTAATGGAAT+CGG | - | chr6.2:23199836-23199855 | MS.gene67013:intron | 30.0% | |
| ! | CAGTGTAAAACTATTTTACG+CGG | - | chr6.2:23200061-23200080 | MS.gene67013:intron | 30.0% |
| !!! | CAGTGTATACTAGTTTTACA+AGG | - | chr6.2:23199766-23199785 | MS.gene67013:intron | 30.0% |
| ACCATTATATCAAAACCGGA+CGG | + | chr6.2:23199705-23199724 | None:intergenic | 35.0% | |
| ACCTCTCCTCATATTAATTG+AGG | - | chr6.2:23199393-23199412 | MS.gene67013:CDS | 35.0% | |
| CAAACGGTCTAGATTTCAAA+CGG | + | chr6.2:23199965-23199984 | None:intergenic | 35.0% | |
| CCGAACCATTATATCAAAAC+CGG | + | chr6.2:23199709-23199728 | None:intergenic | 35.0% | |
| CCTCTCCTCATATTAATTGA+GGG | - | chr6.2:23199394-23199413 | MS.gene67013:CDS | 35.0% | |
| CTCTCCTCATATTAATTGAG+GGG | - | chr6.2:23199395-23199414 | MS.gene67013:CDS | 35.0% | |
| GAATTCAATGACCAAAATGG+TGG | + | chr6.2:23200257-23200276 | None:intergenic | 35.0% | |
| GAGTTGAATTGTTGTAGTAG+TGG | - | chr6.2:23198980-23198999 | MS.gene67013:intron | 35.0% | |
| GCTCAACAAAAGCAATAGAA+AGG | + | chr6.2:23200279-23200298 | None:intergenic | 35.0% | |
| TCTCCTCATATTAATTGAGG+GGG | - | chr6.2:23199396-23199415 | MS.gene67013:CDS | 35.0% | |
| TGCCAAACACACCTAAATTT+AGG | + | chr6.2:23199113-23199132 | None:intergenic | 35.0% | |
| TGTAAACAGTCAATGGTTGT+TGG | + | chr6.2:23199996-23200015 | None:intergenic | 35.0% | |
| TTATATTATGCATGCAGCCA+GGG | - | chr6.2:23200116-23200135 | MS.gene67013:intron | 35.0% | |
| TTGAAACGGTCTAGATCAAA+CGG | - | chr6.2:23199916-23199935 | MS.gene67013:intron | 35.0% | |
| TTGAATCTCTCAAGATTCTC+AGG | + | chr6.2:23199572-23199591 | None:intergenic | 35.0% | |
| TTGATCTAGACCGTTTCAAA+CGG | + | chr6.2:23199915-23199934 | None:intergenic | 35.0% | |
| TTTGAGGAAGAAAGAAGTGA+TGG | + | chr6.2:23198758-23198777 | None:intergenic | 35.0% | |
| ! | AAACCAGTTTAGGTTTCTCT+TGG | - | chr6.2:23199656-23199675 | MS.gene67013:intron | 35.0% |
| ! | CGATCAAAATCGGACAATTT+TGG | - | chr6.2:23199240-23199259 | MS.gene67013:intron | 35.0% |
| !! | CCGGTTTTGATATAATGGTT+CGG | - | chr6.2:23199706-23199725 | MS.gene67013:intron | 35.0% |
| AATTCTCGCATTTATGCGGT+CGG | - | chr6.2:23199201-23199220 | MS.gene67013:intron | 40.0% | |
| ACAGTGCAATGAGTGGTTAT+TGG | - | chr6.2:23200552-23200571 | MS.gene67013:intron | 40.0% | |
| ACCGTTGGATCAAGATCAAA+CGG | + | chr6.2:23199320-23199339 | None:intergenic | 40.0% | |
| ACCGTTTGATCTTGATCCAA+CGG | - | chr6.2:23199316-23199335 | MS.gene67013:intron | 40.0% | |
| AGGTAGGTGTAAACAGTCAA+TGG | + | chr6.2:23200003-23200022 | None:intergenic | 40.0% | |
| ATGCCAAGAGAAACCTAAAC+TGG | + | chr6.2:23199662-23199681 | None:intergenic | 40.0% | |
| ATTAGGACGTCTTGCTTTGT+TGG | - | chr6.2:23200946-23200965 | MS.gene67013:CDS | 40.0% | |
| ATTGCCACATAAACCTAGGT+AGG | + | chr6.2:23200019-23200038 | None:intergenic | 40.0% | |
| ATTTCAAACGGTCCATCAGA+TGG | + | chr6.2:23199953-23199972 | None:intergenic | 40.0% | |
| CATGTGTCGAATATCGAACA+CGG | - | chr6.2:23199131-23199150 | MS.gene67013:intron | 40.0% | |
| CCCTCAATTAATATGAGGAG+AGG | + | chr6.2:23199397-23199416 | None:intergenic | 40.0% | |
| CGGAAATTCTCGCATTTATG+CGG | - | chr6.2:23199197-23199216 | MS.gene67013:intron | 40.0% | |
| GATACTTACAACAGCAAGCA+TGG | + | chr6.2:23199624-23199643 | None:intergenic | 40.0% | |
| GATTCACCATGACTTCTGAT+TGG | - | chr6.2:23198828-23198847 | MS.gene67013:CDS | 40.0% | |
| GGTTAATGAGATGTTCGATC+TGG | + | chr6.2:23200752-23200771 | None:intergenic | 40.0% | |
| GTTAACGCGGTTTACATGTA+TGG | + | chr6.2:23200777-23200796 | None:intergenic | 40.0% | |
| GTTAATCGCGTTCAAATTCG+TGG | - | chr6.2:23200684-23200703 | MS.gene67013:intron | 40.0% | |
| GTTATATTATGCATGCAGCC+AGG | - | chr6.2:23200115-23200134 | MS.gene67013:intron | 40.0% | |
| GTTCAACAAACAGCATATCC+AGG | - | chr6.2:23200986-23201005 | MS.gene67013:CDS | 40.0% | |
| GTTGTTGGATCGAGATCAAA+CGG | + | chr6.2:23199981-23200000 | None:intergenic | 40.0% | |
| TACACCTACCTAGGTTTATG+TGG | - | chr6.2:23200012-23200031 | MS.gene67013:intron | 40.0% | |
| TCACATTGCCACATAAACCT+AGG | + | chr6.2:23200023-23200042 | None:intergenic | 40.0% | |
| TCGATCCAACAGACATTGAT+GGG | + | chr6.2:23199862-23199881 | None:intergenic | 40.0% | |
| TCTGTTGGATCGAGATCAAA+CGG | - | chr6.2:23199869-23199888 | MS.gene67013:intron | 40.0% | |
| TGAACTCATTCACTGCAGAT+GGG | - | chr6.2:23199598-23199617 | MS.gene67013:CDS | 40.0% | |
| TGTGTTGCCAAATTCTCCAA+AGG | + | chr6.2:23201019-23201038 | None:intergenic | 40.0% | |
| TGTTGTCGAATTTCAGTGCA+CGG | + | chr6.2:23200495-23200514 | None:intergenic | 40.0% | |
| TTGACTGTTTACACCTACCT+AGG | - | chr6.2:23200003-23200022 | MS.gene67013:intron | 40.0% | |
| TTTCAAACGGTCCATCAGAT+GGG | + | chr6.2:23199952-23199971 | None:intergenic | 40.0% | |
| TTTCCAATGTTGTTGTGCCA+TGG | + | chr6.2:23201052-23201071 | None:intergenic | 40.0% | |
| ! | AACTGGACCTTTGGAGAATT+TGG | - | chr6.2:23201009-23201028 | MS.gene67013:CDS | 40.0% |
| ! | ATTTTCCGCATTCATGCAGT+CGG | + | chr6.2:23199353-23199372 | None:intergenic | 40.0% |
| !! | AATGACCAAAATGGTGGGTA+GGG | + | chr6.2:23200251-23200270 | None:intergenic | 40.0% |
| !! | ACCGTCCGGTTTTGATATAA+TGG | - | chr6.2:23199701-23199720 | MS.gene67013:intron | 40.0% |
| !! | CAGGGTACTTCTTCTTTTCA+GGG | + | chr6.2:23200324-23200343 | None:intergenic | 40.0% |
| !! | CTAGAAGAAGCATTTGTGCA+AGG | + | chr6.2:23198809-23198828 | None:intergenic | 40.0% |
| !! | TTGCTTTTGTTGAGCACCAA+AGG | - | chr6.2:23200284-23200303 | MS.gene67013:intron | 40.0% |
| !!! | ATTTTGGTACCAGAGGCATT+GGG | - | chr6.2:23200139-23200158 | MS.gene67013:intron | 40.0% |
| !!! | CTTGCTTTGTTGGCTTTTGT+TGG | - | chr6.2:23200956-23200975 | MS.gene67013:CDS | 40.0% |
| ACGCGGTTTACATGTATGGT+TGG | + | chr6.2:23200773-23200792 | None:intergenic | 45.0% | |
| AGGCATCCAATCAGAAGTCA+TGG | + | chr6.2:23198837-23198856 | None:intergenic | 45.0% | |
| ATATCCAGGAACTGGACCTT+TGG | - | chr6.2:23201000-23201019 | MS.gene67013:CDS | 45.0% | |
| ATGACTTCTGATTGGATGCC+TGG | - | chr6.2:23198836-23198855 | MS.gene67013:CDS | 45.0% | |
| CAAACAGCATATCCAGGAAC+TGG | - | chr6.2:23200992-23201011 | MS.gene67013:CDS | 45.0% | |
| CTCGATCCAACAGACATTGA+TGG | + | chr6.2:23199863-23199882 | None:intergenic | 45.0% | |
| CTGAACTCATTCACTGCAGA+TGG | - | chr6.2:23199597-23199616 | MS.gene67013:CDS | 45.0% | |
| GATCCATGGCACAACAACAT+TGG | - | chr6.2:23201046-23201065 | MS.gene67013:CDS | 45.0% | |
| GCTCCCCCTCAATTAATATG+AGG | + | chr6.2:23199402-23199421 | None:intergenic | 45.0% | |
| GGAGAATTTGGCAACACACT+TGG | - | chr6.2:23201021-23201040 | MS.gene67013:CDS | 45.0% | |
| GGATTTGATCCTCTACGTCT+GGG | - | chr6.2:23199539-23199558 | MS.gene67013:CDS | 45.0% | |
| GGTCTTTCTCCATACTCCTT+TGG | + | chr6.2:23200303-23200322 | None:intergenic | 45.0% | |
| GGTTAACACAGTGCAATGAG+TGG | - | chr6.2:23200545-23200564 | MS.gene67013:intron | 45.0% | |
| GTCTAAATCAGCCCATCTGA+TGG | - | chr6.2:23199938-23199957 | MS.gene67013:intron | 45.0% | |
| TGGATTTGATCCTCTACGTC+TGG | - | chr6.2:23199538-23199557 | MS.gene67013:CDS | 45.0% | |
| TGTTGAGCACCAAAGGAGTA+TGG | - | chr6.2:23200291-23200310 | MS.gene67013:intron | 45.0% | |
| TTGATCCAACGGTCACTGAT+GGG | - | chr6.2:23199327-23199346 | MS.gene67013:intron | 45.0% | |
| ! | GAAGCATTTGTGCAAGGAAG+TGG | + | chr6.2:23198803-23198822 | None:intergenic | 45.0% |
| ! | GGTGGTGCTTTTGATCCTTT+GGG | - | chr6.2:23200343-23200362 | MS.gene67013:intron | 45.0% |
| !! | AAAGGATCAAAAGCACCACC+AGG | + | chr6.2:23200343-23200362 | None:intergenic | 45.0% |
| !! | AAGGATCAAAAGCACCACCA+GGG | + | chr6.2:23200342-23200361 | None:intergenic | 45.0% |
| !! | CAATGACCAAAATGGTGGGT+AGG | + | chr6.2:23200252-23200271 | None:intergenic | 45.0% |
| !! | CCAGGGTACTTCTTCTTTTC+AGG | + | chr6.2:23200325-23200344 | None:intergenic | 45.0% |
| !! | CCTGAAAAGAAGAAGTACCC+TGG | - | chr6.2:23200322-23200341 | MS.gene67013:intron | 45.0% |
| !! | GAAAAGAAGAAGTACCCTGG+TGG | - | chr6.2:23200325-23200344 | MS.gene67013:intron | 45.0% |
| !! | GATTTTGGTACCAGAGGCAT+TGG | - | chr6.2:23200138-23200157 | MS.gene67013:intron | 45.0% |
| !! | GGGTCTTTAGAGTAACCCAA+AGG | + | chr6.2:23200361-23200380 | None:intergenic | 45.0% |
| !! | TGGTGGTGCTTTTGATCCTT+TGG | - | chr6.2:23200342-23200361 | MS.gene67013:intron | 45.0% |
| !!! | ATAATATATTTTTTTACTAA+TGG | - | chr6.2:23199082-23199101 | MS.gene67013:intron | 5.0% |
| AGTACCACCTTTCACACACG+CGG | - | chr6.2:23200524-23200543 | MS.gene67013:intron | 50.0% | |
| ATCGGCCCATCAATGTCTGT+TGG | - | chr6.2:23199854-23199873 | MS.gene67013:intron | 50.0% | |
| CAACACACTTGGCTGATCCA+TGG | - | chr6.2:23201032-23201051 | MS.gene67013:CDS | 50.0% | |
| CCATCAAGGTAAGGTGGTCT+AGG | + | chr6.2:23198866-23198885 | None:intergenic | 50.0% | |
| CCTAGACCACCTTACCTTGA+TGG | - | chr6.2:23198863-23198882 | MS.gene67013:intron | 50.0% | |
| CTAGTAGCTGTGAAACCGTC+CGG | - | chr6.2:23199687-23199706 | MS.gene67013:intron | 50.0% | |
| CTTGATCCAACGGTCACTGA+TGG | - | chr6.2:23199326-23199345 | MS.gene67013:intron | 50.0% | |
| GCTGAACCATCAAGGTAAGG+TGG | + | chr6.2:23198872-23198891 | None:intergenic | 50.0% | |
| GGAGCTGAACCATCAAGGTA+AGG | + | chr6.2:23198875-23198894 | None:intergenic | 50.0% | |
| GTGTTAACCGCGTGTGTGAA+AGG | + | chr6.2:23200534-23200553 | None:intergenic | 50.0% | |
| TTAACCGCGTGTGTGAAAGG+TGG | + | chr6.2:23200531-23200550 | None:intergenic | 50.0% | |
| TTCTCCAAAGGTCCAGTTCC+TGG | + | chr6.2:23201007-23201026 | None:intergenic | 50.0% | |
| TTGCCTAATCCCAATGCCTC+TGG | + | chr6.2:23200151-23200170 | None:intergenic | 50.0% | |
| ! | ACCTTGATGGTTCAGCTCCA+GGG | - | chr6.2:23198876-23198895 | MS.gene67013:intron | 50.0% |
| ! | ACTGGGTGAAAGCACAGGAA+TGG | - | chr6.2:23200170-23200189 | MS.gene67013:intron | 50.0% |
| ! | ATGCATGCAGCCAGGGATTT+TGG | - | chr6.2:23200123-23200142 | MS.gene67013:intron | 50.0% |
| ! | CTGGGTGAAAGCACAGGAAT+GGG | - | chr6.2:23200171-23200190 | MS.gene67013:intron | 50.0% |
| ! | GGCATTGGGATTAGGCAACT+GGG | - | chr6.2:23200153-23200172 | MS.gene67013:intron | 50.0% |
| ! | TACCTTGATGGTTCAGCTCC+AGG | - | chr6.2:23198875-23198894 | MS.gene67013:intron | 50.0% |
| !! | AGGCATTGGGATTAGGCAAC+TGG | - | chr6.2:23200152-23200171 | MS.gene67013:intron | 50.0% |
| !! | GTACCAGAGGCATTGGGATT+AGG | - | chr6.2:23200145-23200164 | MS.gene67013:intron | 50.0% |
| ACCCTGGAGCTGAACCATCA+AGG | + | chr6.2:23198880-23198899 | None:intergenic | 55.0% | |
| ACCTAGGCAACCCTGTTCCA+TGG | - | chr6.2:23200221-23200240 | MS.gene67013:CDS | 55.0% | |
| AGGTAGGTTGCTTGTCCTCC+AGG | + | chr6.2:23200205-23200224 | None:intergenic | 55.0% | |
| ATGGGCCGACTGCATGAATG+CGG | - | chr6.2:23199345-23199364 | MS.gene67013:intron | 55.0% | |
| CCTAGGCAACCCTGTTCCAT+GGG | - | chr6.2:23200222-23200241 | MS.gene67013:CDS | 55.0% | |
| CTAGGCAACCCTGTTCCATG+GGG | - | chr6.2:23200223-23200242 | MS.gene67013:CDS | 55.0% | |
| GCCTCTGGTACCAAAATCCC+TGG | + | chr6.2:23200136-23200155 | None:intergenic | 55.0% | |
| GGAGGACAAGCAACCTACCT+AGG | - | chr6.2:23200205-23200224 | MS.gene67013:CDS | 55.0% | |
| GGTACTTCACCCAGACGTAG+AGG | + | chr6.2:23199551-23199570 | None:intergenic | 55.0% | |
| TAAGGTGGTCTAGGCTGACC+AGG | + | chr6.2:23198857-23198876 | None:intergenic | 55.0% | |
| TGGAACAGGGTTGCCTAGGT+AGG | + | chr6.2:23200221-23200240 | None:intergenic | 55.0% | |
| ! | AGGCAACTGGGTGAAAGCAC+AGG | - | chr6.2:23200165-23200184 | MS.gene67013:intron | 55.0% |
| !! | GCCAGGGATTTTGGTACCAG+AGG | - | chr6.2:23200132-23200151 | MS.gene67013:intron | 55.0% |
| CAGGAATGGGCAGCACTTCC+TGG | - | chr6.2:23200184-23200203 | MS.gene67013:CDS | 60.0% | |
| CCCATGGAACAGGGTTGCCT+AGG | + | chr6.2:23200225-23200244 | None:intergenic | 60.0% | |
| GAATGGGCAGCACTTCCTGG+AGG | - | chr6.2:23200187-23200206 | MS.gene67013:CDS | 60.0% | |
| ! | GGGCACCCTACCCACCATTT+TGG | - | chr6.2:23200243-23200262 | MS.gene67013:CDS | 60.0% |
| ! | GTAGGGTGCCCCATGGAACA+GGG | + | chr6.2:23200234-23200253 | None:intergenic | 60.0% |
| GTCGGCCCATCAGTGACCGT+TGG | + | chr6.2:23199335-23199354 | None:intergenic | 65.0% | |
| ! | GGTAGGGTGCCCCATGGAAC+AGG | + | chr6.2:23200235-23200254 | None:intergenic | 65.0% |
| !! | ATGGTGGGTAGGGTGCCCCA+TGG | + | chr6.2:23200241-23200260 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 23198713 | 23201093 | 23198713 | ID=MS.gene67013 |
| chr6.2 | mRNA | 23198713 | 23201093 | 23198713 | ID=MS.gene67013.t1;Parent=MS.gene67013 |
| chr6.2 | exon | 23200909 | 23201093 | 23200909 | ID=MS.gene67013.t1.exon1;Parent=MS.gene67013.t1 |
| chr6.2 | CDS | 23200909 | 23201093 | 23200909 | ID=cds.MS.gene67013.t1;Parent=MS.gene67013.t1 |
| chr6.2 | exon | 23200172 | 23200274 | 23200172 | ID=MS.gene67013.t1.exon2;Parent=MS.gene67013.t1 |
| chr6.2 | CDS | 23200172 | 23200274 | 23200172 | ID=cds.MS.gene67013.t1;Parent=MS.gene67013.t1 |
| chr6.2 | exon | 23199385 | 23199673 | 23199385 | ID=MS.gene67013.t1.exon3;Parent=MS.gene67013.t1 |
| chr6.2 | CDS | 23199385 | 23199673 | 23199385 | ID=cds.MS.gene67013.t1;Parent=MS.gene67013.t1 |
| chr6.2 | exon | 23198713 | 23198855 | 23198713 | ID=MS.gene67013.t1.exon4;Parent=MS.gene67013.t1 |
| chr6.2 | CDS | 23198713 | 23198855 | 23198713 | ID=cds.MS.gene67013.t1;Parent=MS.gene67013.t1 |
| Gene Sequence |
| Protein sequence |
