AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93096


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93096.t1 MTR_1g107305 98.404 188 3 0 1 188 27 214 2.04e-136 385
MS.gene93096.t1 MTR_1g107295 98.404 188 3 0 1 188 27 214 1.54e-132 382
MS.gene93096.t1 MTR_4g062510 92.169 166 13 0 23 188 48 213 2.54e-107 317
MS.gene93096.t1 MTR_4g062500 79.787 188 37 1 1 188 25 211 1.36e-103 308
MS.gene93096.t1 MTR_7g092620 51.136 176 86 0 13 188 35 210 1.24e-58 191
MS.gene93096.t1 MTR_0181s0030 47.159 176 93 0 13 188 35 210 4.86e-56 184
MS.gene93096.t1 MTR_0171s0020 44.385 187 103 1 3 188 27 213 9.50e-54 179
MS.gene93096.t1 MTR_0171s0010 46.629 178 93 1 13 188 36 213 1.56e-52 175
MS.gene93096.t1 MTR_3g020780 46.023 176 95 0 13 188 36 211 9.75e-52 173
MS.gene93096.t1 MTR_7g028020 46.995 183 86 3 6 188 28 199 1.86e-50 170
MS.gene93096.t1 MTR_7g027960 48.023 177 82 3 13 188 32 199 4.54e-50 169
MS.gene93096.t1 MTR_4g062530 49.102 167 76 2 21 187 44 201 1.00e-48 164
MS.gene93096.t1 MTR_7g056103 40.331 181 106 1 8 188 32 210 6.44e-42 147
MS.gene93096.t1 MTR_4g088160 40.884 181 95 5 11 188 33 204 3.74e-39 140
MS.gene93096.t1 MTR_4g088195 39.227 181 98 5 11 188 33 204 5.42e-37 134
MS.gene93096.t1 MTR_8g469300 39.053 169 99 2 23 188 46 213 6.61e-36 131
MS.gene93096.t1 MTR_4g088170 38.674 181 99 5 11 188 33 204 7.37e-36 131
MS.gene93096.t1 MTR_1g035140 36.158 177 110 2 1 176 26 200 1.31e-35 130
MS.gene93096.t1 MTR_6g084770 36.076 158 101 0 12 169 37 194 1.75e-33 124
MS.gene93096.t1 MTR_5g470730 36.943 157 99 0 13 169 38 194 1.87e-33 123
MS.gene93096.t1 MTR_5g070850 34.395 157 103 0 13 169 38 194 3.40e-33 124
MS.gene93096.t1 MTR_5g095290 36.310 168 102 3 13 179 42 205 3.69e-33 123
MS.gene93096.t1 MTR_8g036185 37.500 168 104 1 22 188 44 211 5.13e-33 123
MS.gene93096.t1 MTR_1g442730 36.111 180 112 2 1 179 23 200 5.94e-33 123
MS.gene93096.t1 MTR_1g035190 35.028 177 109 3 1 176 12 183 9.40e-33 122
MS.gene93096.t1 MTR_3g057900 37.288 177 106 3 3 178 27 199 1.13e-32 122
MS.gene93096.t1 MTR_3g058000 36.364 176 109 2 13 187 39 212 1.25e-32 122
MS.gene93096.t1 MTR_5g018980 35.795 176 105 3 13 185 35 205 1.53e-32 122
MS.gene93096.t1 MTR_3g057970 36.723 177 107 3 3 178 24 196 2.41e-32 121
MS.gene93096.t1 MTR_3g057980 34.409 186 119 2 3 187 27 210 2.63e-32 121
MS.gene93096.t1 MTR_6g035115 36.025 161 100 2 13 172 38 196 5.86e-32 120
MS.gene93096.t1 MTR_5g095260 37.037 162 97 3 13 172 42 200 7.31e-32 120
MS.gene93096.t1 MTR_1g023700 35.976 164 104 1 4 166 25 188 1.36e-31 119
MS.gene93096.t1 MTR_3g058240 31.818 176 117 2 13 187 2 175 2.84e-31 118
MS.gene93096.t1 MTR_5g094840 33.523 176 114 2 13 187 45 218 4.56e-31 118
MS.gene93096.t1 MTR_3g436540 35.329 167 105 1 3 169 34 197 5.72e-31 117
MS.gene93096.t1 MTR_7g092600 39.645 169 101 1 21 188 48 216 8.09e-31 117
MS.gene93096.t1 MTR_8g104080 35.802 162 102 1 12 173 36 195 9.31e-31 113
MS.gene93096.t1 MTR_8g468780 43.443 122 69 0 47 168 1 122 1.58e-30 115
MS.gene93096.t1 MTR_4g104660 33.140 172 114 1 12 182 46 217 1.92e-30 116
MS.gene93096.t1 MTR_3g057910 32.544 169 112 1 1 169 27 193 2.19e-30 116
MS.gene93096.t1 MTR_4g104550 32.386 176 117 1 13 188 29 202 2.99e-30 115
MS.gene93096.t1 MTR_3g058390 33.898 177 113 3 1 176 25 198 3.16e-30 115
MS.gene93096.t1 MTR_1g023730 34.756 164 106 1 4 166 24 187 3.86e-30 115
MS.gene93096.t1 MTR_5g070710 35.032 157 102 0 13 169 37 193 4.10e-30 115
MS.gene93096.t1 MTR_3g058250 32.955 176 114 3 2 176 26 198 4.77e-30 115
MS.gene93096.t1 MTR_0554s0020 31.818 176 117 2 13 187 38 211 4.96e-30 115
MS.gene93096.t1 MTR_3g058220 35.065 154 97 2 13 165 37 188 6.65e-30 114
MS.gene93096.t1 MTR_5g094550 34.839 155 97 2 13 165 39 191 7.47e-30 114
MS.gene93096.t1 MTR_4g133750 35.897 156 95 2 13 165 38 191 1.17e-29 114
MS.gene93096.t1 MTR_3g076530 33.962 159 103 1 13 171 41 197 1.22e-29 114
MS.gene93096.t1 MTR_4g104640 34.807 181 114 3 10 188 46 224 1.25e-29 114
MS.gene93096.t1 MTR_5g070690 36.306 157 100 0 13 169 36 192 1.54e-29 114
MS.gene93096.t1 MTR_5g070800 36.306 157 100 0 13 169 36 192 1.54e-29 114
MS.gene93096.t1 MTR_5g019010 32.620 187 124 1 1 187 26 210 1.90e-29 113
MS.gene93096.t1 MTR_3g058400 34.091 176 113 2 13 187 38 211 3.01e-29 112
MS.gene93096.t1 MTR_5g018990 35.196 179 107 4 13 188 36 208 3.77e-29 112
MS.gene93096.t1 MTR_5g073250 35.256 156 95 3 13 165 39 191 4.40e-29 112
MS.gene93096.t1 MTR_6g039630 33.766 154 99 2 13 165 35 186 6.26e-29 108
MS.gene93096.t1 MTR_3g058060 33.523 176 114 2 13 187 39 212 8.43e-29 112
MS.gene93096.t1 MTR_3g057860 31.250 176 117 2 13 188 38 209 1.54e-28 110
MS.gene93096.t1 MTR_0171s0030 38.400 125 77 0 64 188 1 125 1.62e-28 110
MS.gene93096.t1 MTR_1g023720 34.146 164 107 1 4 166 24 187 1.88e-28 110
MS.gene93096.t1 MTR_2g010530 31.250 176 118 2 13 187 35 208 2.07e-28 110
MS.gene93096.t1 MTR_3g058210 30.682 176 119 2 13 187 38 211 2.30e-28 110
MS.gene93096.t1 MTR_2g450040 32.161 199 119 5 2 188 30 224 2.47e-28 110
MS.gene93096.t1 MTR_5g070980 35.032 157 102 0 13 169 38 194 5.32e-28 105
MS.gene93096.t1 MTR_5g094560 32.903 155 100 2 13 165 39 191 8.90e-28 108
MS.gene93096.t1 MTR_8g091690 32.955 176 116 1 13 188 29 202 9.27e-28 108
MS.gene93096.t1 MTR_5g018480 32.143 196 123 5 3 188 30 225 1.27e-27 106
MS.gene93096.t1 MTR_5g016440 32.240 183 122 2 8 188 27 209 1.38e-27 108
MS.gene93096.t1 MTR_4g048580 31.977 172 108 3 13 182 39 203 2.12e-27 107
MS.gene93096.t1 MTR_0059s0170 33.333 171 111 2 10 179 35 203 2.33e-27 107
MS.gene93096.t1 MTR_4g104610 31.138 167 115 0 13 179 29 195 3.12e-27 107
MS.gene93096.t1 MTR_8g466180 34.483 145 92 2 13 156 35 177 3.14e-27 107
MS.gene93096.t1 MTR_3g058110 36.538 156 92 3 13 165 39 190 3.47e-27 107
MS.gene93096.t1 MTR_6g034965 33.333 156 100 2 13 165 36 190 4.74e-27 106
MS.gene93096.t1 MTR_5g094540 35.669 157 93 3 13 165 39 191 9.22e-27 105
MS.gene93096.t1 MTR_5g072980 30.508 177 122 1 13 188 34 210 9.23e-27 105
MS.gene93096.t1 MTR_5g072930 30.508 177 122 1 13 188 34 210 9.23e-27 105
MS.gene93096.t1 MTR_3g057800 29.545 176 118 2 13 188 37 206 9.27e-27 105
MS.gene93096.t1 MTR_6g462640 32.298 161 106 2 13 172 36 194 1.16e-26 105
MS.gene93096.t1 MTR_5g070920 34.395 157 103 0 13 169 38 194 1.32e-26 105
MS.gene93096.t1 MTR_5g016410 31.148 183 119 3 13 188 33 215 2.18e-26 105
MS.gene93096.t1 MTR_5g094520 33.548 155 99 2 13 165 70 222 2.84e-26 104
MS.gene93096.t1 MTR_4g025950 30.556 180 121 3 12 188 29 207 2.84e-26 102
MS.gene93096.t1 MTR_5g070700 33.758 157 104 0 13 169 38 194 3.32e-26 104
MS.gene93096.t1 MTR_3g024520 31.792 173 113 1 21 188 41 213 3.33e-26 104
MS.gene93096.t1 MTR_6g035100 36.111 144 88 2 13 153 36 178 3.96e-26 104
MS.gene93096.t1 MTR_8g020940 35.669 157 99 1 13 169 37 191 4.23e-26 104
MS.gene93096.t1 MTR_3g025230 31.792 173 113 1 21 188 41 213 4.30e-26 104
MS.gene93096.t1 MTR_5g094570 31.410 156 101 3 13 165 39 191 4.42e-26 103
MS.gene93096.t1 MTR_6g008530 32.836 201 118 4 2 185 31 231 1.05e-25 103
MS.gene93096.t1 MTR_6g008620 32.995 197 121 3 2 187 31 227 1.07e-25 103
MS.gene93096.t1 MTR_5g073320 30.939 181 112 5 13 188 39 211 1.16e-25 102
MS.gene93096.t1 MTR_5g073230 41.509 106 59 2 13 116 42 146 1.33e-25 102
MS.gene93096.t1 MTR_7g087520 30.769 169 117 0 13 181 38 206 1.40e-25 102
MS.gene93096.t1 MTR_3g025260 31.214 173 114 1 21 188 41 213 1.78e-25 102
MS.gene93096.t1 MTR_4g102310 29.545 176 120 2 13 188 40 211 2.18e-25 102
MS.gene93096.t1 MTR_4g025980 31.847 157 106 1 11 166 29 185 2.23e-25 102
MS.gene93096.t1 MTR_8g020950 35.032 157 100 1 13 169 39 193 2.35e-25 102
MS.gene93096.t1 MTR_5g095220 35.119 168 89 4 13 179 29 177 2.44e-25 102
MS.gene93096.t1 MTR_4g089020 31.210 157 105 1 13 169 31 184 2.69e-25 102
MS.gene93096.t1 MTR_5g094660 29.651 172 112 3 13 182 39 203 3.31e-25 101
MS.gene93096.t1 MTR_3g076560 35.625 160 100 1 13 169 52 211 3.61e-25 101
MS.gene93096.t1 MTR_6g008600 32.461 191 118 3 2 181 30 220 1.80e-24 99.8
MS.gene93096.t1 MTR_8g046210 27.568 185 131 1 2 186 34 215 2.22e-24 99.4
MS.gene93096.t1 MTR_8g076290 30.061 163 110 3 11 173 34 192 2.71e-24 99.4
MS.gene93096.t1 MTR_4g109470 30.337 178 109 3 21 188 40 212 3.71e-24 99.0
MS.gene93096.t1 MTR_4g025970 30.233 172 117 2 12 180 29 200 4.20e-24 98.6
MS.gene93096.t1 MTR_0022s0290 33.333 159 104 1 13 169 42 200 4.63e-24 98.6
MS.gene93096.t1 MTR_4g071710 29.299 157 108 2 6 162 31 184 5.85e-24 98.2
MS.gene93096.t1 MTR_5g073020 33.766 154 101 1 13 165 34 187 8.10e-24 97.8
MS.gene93096.t1 MTR_6g008640 34.973 183 106 4 13 184 40 220 8.50e-24 97.8
MS.gene93096.t1 MTR_5g045770 30.769 156 107 1 12 166 29 184 1.12e-23 97.4
MS.gene93096.t1 MTR_4g471620 28.481 158 110 2 6 163 31 185 1.17e-23 93.2
MS.gene93096.t1 MTR_2g065360 29.545 176 124 0 13 188 8 183 1.49e-23 97.1
MS.gene93096.t1 MTR_4g089030 29.114 158 111 1 13 169 49 206 1.85e-23 97.1
MS.gene93096.t1 MTR_4g089055 30.573 157 106 1 13 169 53 206 2.13e-23 96.7
MS.gene93096.t1 MTR_0608s0010 26.136 176 130 0 13 188 35 210 2.71e-23 95.5
MS.gene93096.t1 MTR_4g094775 30.055 183 121 3 13 188 33 215 3.08e-23 96.3
MS.gene93096.t1 MTR_8g046240 28.108 185 130 2 2 186 34 215 3.59e-23 95.9
MS.gene93096.t1 MTR_6g008500 28.718 195 115 4 2 174 29 221 4.07e-23 95.9
MS.gene93096.t1 MTR_8g020960 33.121 157 103 1 13 169 38 192 5.60e-23 95.5
MS.gene93096.t1 MTR_7g012330 29.379 177 124 1 13 188 35 211 5.81e-23 95.5
MS.gene93096.t1 MTR_4g026050 30.952 168 113 2 12 176 29 196 6.16e-23 95.1
MS.gene93096.t1 MTR_1g031700 26.136 176 130 0 13 188 35 210 6.20e-23 95.1
MS.gene93096.t1 MTR_4g088400 24.194 186 131 3 13 188 47 232 8.11e-23 95.1
MS.gene93096.t1 MTR_1g103680 26.437 174 128 0 13 186 36 209 8.68e-23 94.7
MS.gene93096.t1 MTR_5g007460 27.746 173 121 1 13 181 10 182 1.10e-22 94.4
MS.gene93096.t1 MTR_7g012860 32.278 158 106 1 13 169 34 191 1.48e-22 94.4
MS.gene93096.t1 MTR_0287s0060 32.278 158 106 1 13 169 34 191 1.48e-22 94.4
MS.gene93096.t1 MTR_5g073240 36.697 109 67 1 13 119 83 191 1.55e-22 90.1
MS.gene93096.t1 MTR_1g103670 26.437 174 128 0 13 186 35 208 4.74e-22 92.8
MS.gene93096.t1 MTR_3g077460 33.537 164 88 4 9 169 1 146 5.89e-22 92.0
MS.gene93096.t1 MTR_3g436390 26.752 157 115 0 13 169 37 193 8.18e-22 92.0
MS.gene93096.t1 MTR_4g089025 29.299 157 110 1 13 169 53 208 1.24e-21 91.7
MS.gene93096.t1 MTR_5g021390 28.205 156 109 2 10 165 42 194 1.41e-21 91.7
MS.gene93096.t1 MTR_5g094535 35.088 114 72 1 13 124 39 152 1.61e-21 88.2
MS.gene93096.t1 MTR_7g075610 28.409 176 124 1 13 186 35 210 4.02e-21 90.1
MS.gene93096.t1 MTR_4g077210 28.324 173 118 3 22 188 45 217 4.18e-21 90.1
MS.gene93096.t1 MTR_4g088415 23.438 192 133 4 9 188 41 230 4.58e-21 89.4
MS.gene93096.t1 MTR_7g103450 26.543 162 116 1 13 171 47 208 5.37e-21 89.7
MS.gene93096.t1 MTR_4g078110 28.736 174 109 1 13 186 29 187 5.46e-21 89.7
MS.gene93096.t1 MTR_0155s0010 31.579 114 78 0 15 128 20 133 1.33e-20 83.6
MS.gene93096.t1 MTR_7g075390 27.273 176 126 1 13 186 35 210 1.33e-20 88.6
MS.gene93096.t1 MTR_8g012585 29.114 158 104 2 39 188 1 158 1.37e-20 88.6
MS.gene93096.t1 MTR_5g007550 26.415 159 117 0 13 171 43 201 2.10e-20 88.2
MS.gene93096.t1 MTR_5g007450 26.415 159 117 0 13 171 43 201 2.16e-20 88.2
MS.gene93096.t1 MTR_4g026070 32.184 174 115 2 6 176 23 196 2.58e-20 86.3
MS.gene93096.t1 MTR_6g022450 34.375 160 100 3 13 167 38 197 3.71e-20 87.4
MS.gene93096.t1 MTR_6g008430 30.460 174 107 5 2 167 34 201 4.22e-20 87.4
MS.gene93096.t1 MTR_4g018800 28.351 194 128 3 2 184 29 222 4.34e-20 87.4
MS.gene93096.t1 MTR_2g073440 26.738 187 134 2 1 187 25 208 4.46e-20 87.0
MS.gene93096.t1 MTR_4g095050 30.729 192 122 3 8 188 27 218 4.54e-20 87.0
MS.gene93096.t1 MTR_4g088425 25.556 180 126 3 13 188 40 215 5.06e-20 87.0
MS.gene93096.t1 MTR_3g076550 33.333 159 70 3 13 169 70 194 6.09e-20 86.7
MS.gene93096.t1 MTR_1g055325 25.134 187 137 1 1 187 46 229 7.94e-20 86.7
MS.gene93096.t1 MTR_6g008650 32.955 176 107 4 3 169 32 205 2.17e-19 85.1
MS.gene93096.t1 MTR_3g058230 30.645 124 84 1 49 172 3 124 5.48e-19 84.0
MS.gene93096.t1 MTR_1g037370 27.322 183 130 1 4 186 26 205 9.46e-19 83.2
MS.gene93096.t1 MTR_3g058380 28.244 131 92 1 57 187 2 130 1.34e-18 82.8
MS.gene93096.t1 MTR_6g042540 29.878 164 103 4 16 167 34 197 2.30e-18 82.4
MS.gene93096.t1 MTR_2g073420 24.000 175 133 0 13 187 45 219 2.36e-18 82.4
MS.gene93096.t1 MTR_6g042610 30.061 163 106 3 13 167 35 197 2.62e-18 82.0
MS.gene93096.t1 MTR_4g094772 24.599 187 133 3 3 188 27 206 2.68e-18 82.0
MS.gene93096.t1 MTR_5g094460 35.238 105 65 2 13 114 30 134 4.18e-18 80.9
MS.gene93096.t1 MTR_8g092760 32.738 168 91 6 21 187 123 269 9.66e-18 80.5
MS.gene93096.t1 MTR_4g026200 30.168 179 116 3 4 176 21 196 1.33e-17 80.1
MS.gene93096.t1 MTR_5g023680 30.625 160 110 1 11 169 4 163 1.37e-17 80.1
MS.gene93096.t1 MTR_2g437880 30.556 180 115 2 19 188 39 218 1.48e-17 80.1
MS.gene93096.t1 MTR_8g012590 35.115 131 82 2 13 140 38 168 3.11e-17 79.0
MS.gene93096.t1 MTR_4g035330 28.788 132 93 1 13 143 31 162 7.21e-17 77.8
MS.gene93096.t1 MTR_2g437840 31.609 174 112 2 13 184 32 200 7.42e-17 77.8
MS.gene93096.t1 MTR_1g097240 24.000 175 132 1 13 186 28 202 1.31e-16 77.4
MS.gene93096.t1 MTR_4g102280 27.059 170 120 2 19 188 51 216 1.46e-16 77.0
MS.gene93096.t1 MTR_7g075600 26.115 157 113 1 33 186 55 211 1.85e-16 76.6
MS.gene93096.t1 MTR_5g070685 42.308 78 45 0 13 90 39 116 4.49e-16 70.9
MS.gene93096.t1 MTR_4g133760 48.529 68 35 0 49 116 3 70 2.52e-15 73.2
MS.gene93096.t1 MTR_5g075450 23.270 159 120 2 13 169 34 192 4.44e-15 72.8
MS.gene93096.t1 MTR_1g091003 25.157 159 119 0 13 171 35 193 7.05e-15 72.0
MS.gene93096.t1 MTR_3g014880 29.101 189 118 5 13 187 40 226 8.10e-15 72.0
MS.gene93096.t1 MTR_3g467220 26.061 165 119 1 13 174 46 210 8.48e-15 72.0
MS.gene93096.t1 MTR_5g094520 29.915 117 80 1 49 165 3 117 1.04e-14 71.6
MS.gene93096.t1 MTR_7g075580 28.105 153 110 0 19 171 41 193 2.58e-14 70.5
MS.gene93096.t1 MTR_1g111240 25.828 151 110 2 21 169 74 224 2.76e-14 70.5
MS.gene93096.t1 MTR_2g105360 34.259 108 70 1 11 117 34 141 2.84e-14 70.5
MS.gene93096.t1 MTR_3g465300 26.250 160 115 1 13 169 48 207 5.13e-14 69.7
MS.gene93096.t1 MTR_5g094670 26.415 159 82 4 13 155 39 178 5.56e-14 68.6
MS.gene93096.t1 MTR_2g073480 23.913 138 105 0 49 186 3 140 7.21e-14 69.3
MS.gene93096.t1 MTR_7g075540 26.061 165 121 1 19 182 41 205 1.07e-13 68.9
MS.gene93096.t1 MTR_8g073960 25.862 174 123 2 2 169 34 207 2.15e-13 67.8
MS.gene93096.t1 MTR_1g091023 23.392 171 128 1 1 171 26 193 1.26e-12 65.9
MS.gene93096.t1 MTR_5g056720 25.000 124 93 0 34 157 19 142 1.55e-12 65.5
MS.gene93096.t1 MTR_8g073950 25.434 173 120 3 3 169 34 203 2.51e-12 64.7
MS.gene93096.t1 MTR_3g467290 26.752 157 106 3 6 156 44 197 5.32e-12 63.9
MS.gene93096.t1 MTR_3g467200 25.362 138 100 1 32 169 76 210 1.54e-11 62.4
MS.gene93096.t1 MTR_2g010300 28.082 146 101 2 11 152 29 174 2.06e-11 62.0
MS.gene93096.t1 MTR_4g104540 22.388 134 103 1 47 179 1 134 2.08e-11 62.0
MS.gene93096.t1 MTR_1g091010 22.353 170 129 1 2 171 26 192 2.09e-11 62.0
MS.gene93096.t1 MTR_0638s0020 38.235 102 61 1 13 112 8 109 2.54e-11 62.0
MS.gene93096.t1 MTR_3g057880 43.860 57 32 0 13 69 62 118 4.19e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93096.t1 AT5G06900 41.341 179 102 1 11 186 33 211 5.51e-44 152
MS.gene93096.t1 AT2G42250 39.773 176 106 0 13 188 42 217 4.81e-41 145
MS.gene93096.t1 AT3G20940 39.548 177 106 1 13 188 43 219 5.34e-40 142
MS.gene93096.t1 AT3G20950 36.842 190 118 2 1 188 34 223 1.93e-36 132
MS.gene93096.t1 AT3G20110 40.571 175 103 1 15 188 42 216 5.54e-35 129
MS.gene93096.t1 AT4G15330 38.068 176 108 1 14 188 40 215 1.75e-34 127
MS.gene93096.t1 AT4G15360 36.158 177 112 1 13 188 41 217 3.45e-34 126
MS.gene93096.t1 AT3G26300 32.979 188 123 1 1 188 23 207 2.46e-33 124
MS.gene93096.t1 AT5G25140 36.047 172 108 1 13 182 30 201 2.67e-33 124
MS.gene93096.t1 AT2G14100 38.922 167 101 1 23 188 54 220 4.72e-33 123
MS.gene93096.t1 AT3G20140 37.853 177 109 1 13 188 43 219 1.26e-32 122
MS.gene93096.t1 AT5G57260 33.871 186 123 0 3 188 21 206 2.33e-32 121
MS.gene93096.t1 AT1G50520 37.870 169 102 2 21 186 52 220 3.21e-32 121
MS.gene93096.t1 AT5G06905 31.250 176 121 0 13 188 32 207 3.90e-32 121
MS.gene93096.t1 AT3G20130 34.731 167 108 1 23 188 53 219 3.70e-31 118
MS.gene93096.t1 AT4G13310 35.593 177 111 2 13 187 33 208 4.41e-31 116
MS.gene93096.t1 AT3G20100 37.278 169 105 1 21 188 50 218 4.69e-31 118
MS.gene93096.t1 AT3G20090 35.329 167 107 1 23 188 54 220 1.08e-30 117
MS.gene93096.t1 AT2G05180 39.037 187 113 1 3 188 32 218 1.12e-30 116
MS.gene93096.t1 AT2G27000 36.364 165 104 1 23 186 50 214 1.56e-30 116
MS.gene93096.t1 AT4G12320 32.402 179 115 2 11 188 40 213 1.79e-30 116
MS.gene93096.t1 AT4G13310 35.593 177 111 2 13 187 33 208 1.96e-30 116
MS.gene93096.t1 AT3G20080 38.919 185 111 2 3 185 32 216 2.00e-30 116
MS.gene93096.t1 AT3G20080 38.919 185 111 2 3 185 32 216 2.00e-30 116
MS.gene93096.t1 AT2G45560 32.143 168 113 1 13 179 39 206 2.49e-30 111
MS.gene93096.t1 AT3G48320 34.409 186 115 2 1 186 26 204 2.89e-30 115
MS.gene93096.t1 AT4G15350 35.714 168 106 1 23 188 45 212 3.68e-30 115
MS.gene93096.t1 AT4G20240 36.875 160 101 0 10 169 31 190 7.34e-30 113
MS.gene93096.t1 AT4G37430 34.574 188 110 4 13 188 29 215 8.87e-30 114
MS.gene93096.t1 AT4G20240 36.875 160 101 0 10 169 31 190 1.18e-29 113
MS.gene93096.t1 AT5G25130 33.721 172 112 1 13 182 30 201 1.37e-29 114
MS.gene93096.t1 AT2G45560 32.143 168 113 1 13 179 39 206 1.57e-29 111
MS.gene93096.t1 AT3G26310 30.481 187 129 1 2 188 21 206 2.93e-29 113
MS.gene93096.t1 AT1G13090 31.765 170 113 1 13 179 29 198 3.66e-29 109
MS.gene93096.t1 AT5G42580 36.364 154 98 0 33 186 61 214 4.61e-29 112
MS.gene93096.t1 AT5G25120 33.140 172 113 1 13 182 30 201 8.00e-29 111
MS.gene93096.t1 AT2G45560 32.143 168 113 1 13 179 39 206 9.50e-29 111
MS.gene93096.t1 AT3G48290 32.620 187 119 2 1 187 27 206 1.67e-28 110
MS.gene93096.t1 AT3G48290 32.620 187 119 2 1 187 27 206 1.97e-28 110
MS.gene93096.t1 AT3G20120 37.725 167 103 1 23 188 52 218 2.63e-28 110
MS.gene93096.t1 AT4G13290 34.463 177 113 2 13 187 34 209 5.70e-28 109
MS.gene93096.t1 AT5G47990 35.329 167 107 1 23 188 53 219 8.04e-28 108
MS.gene93096.t1 AT1G13110 32.796 186 120 2 2 182 22 207 8.29e-28 108
MS.gene93096.t1 AT1G13090 31.765 170 113 1 13 179 29 198 9.87e-28 108
MS.gene93096.t1 AT3G32047 33.533 167 110 1 23 188 53 219 1.15e-27 108
MS.gene93096.t1 AT1G11610 31.319 182 119 1 13 188 34 215 1.21e-27 108
MS.gene93096.t1 AT5G25180 31.977 172 115 1 13 182 30 201 1.41e-27 108
MS.gene93096.t1 AT1G11610 31.319 182 119 1 13 188 34 215 1.45e-27 108
MS.gene93096.t1 AT3G48300 34.659 176 111 3 14 188 31 203 1.75e-27 107
MS.gene93096.t1 AT3G48300 34.659 176 111 3 14 188 33 205 1.78e-27 107
MS.gene93096.t1 AT3G26290 29.255 188 129 1 1 188 37 220 2.15e-27 107
MS.gene93096.t1 AT3G26290 29.255 188 129 1 1 188 24 207 2.17e-27 107
MS.gene93096.t1 AT1G13080 33.146 178 117 1 13 188 32 209 2.45e-27 107
MS.gene93096.t1 AT3G26330 29.545 176 124 0 13 188 32 207 2.96e-27 107
MS.gene93096.t1 AT4G12300 29.609 179 121 1 10 188 40 213 7.99e-27 106
MS.gene93096.t1 AT3G44250 31.351 185 122 2 3 182 19 203 8.03e-27 106
MS.gene93096.t1 AT3G48310 32.000 175 117 1 13 187 33 205 1.12e-26 105
MS.gene93096.t1 AT4G37340 33.333 192 119 4 4 188 25 214 1.19e-26 105
MS.gene93096.t1 AT3G26320 28.191 188 132 1 1 188 23 207 1.38e-26 105
MS.gene93096.t1 AT2G30770 34.091 176 115 1 13 188 34 208 2.04e-26 105
MS.gene93096.t1 AT3G48280 33.951 162 105 1 13 174 31 190 2.28e-26 105
MS.gene93096.t1 AT4G31970 36.196 163 95 4 14 167 33 195 2.44e-26 105
MS.gene93096.t1 AT2G24180 35.503 169 105 3 13 178 37 204 2.72e-26 104
MS.gene93096.t1 AT5G57220 32.692 156 103 2 13 167 31 185 3.09e-26 104
MS.gene93096.t1 AT1G50560 35.119 168 105 2 23 186 54 221 4.66e-26 104
MS.gene93096.t1 AT3G48270 31.395 172 116 1 14 185 33 202 6.38e-26 103
MS.gene93096.t1 AT3G26190 31.285 179 118 2 13 188 29 205 1.11e-25 103
MS.gene93096.t1 AT3G26170 30.508 177 122 1 13 188 31 207 1.33e-25 102
MS.gene93096.t1 AT3G26280 33.333 153 102 0 13 165 33 185 1.96e-25 102
MS.gene93096.t1 AT2G45550 27.933 179 128 1 1 178 27 205 2.10e-25 102
MS.gene93096.t1 AT3G26280 33.333 153 102 0 13 165 50 202 2.16e-25 102
MS.gene93096.t1 AT4G37410 31.250 176 118 2 2 176 23 196 2.40e-25 102
MS.gene93096.t1 AT5G24950 31.111 180 118 2 13 186 33 212 3.32e-25 101
MS.gene93096.t1 AT5G10610 32.692 156 104 1 13 167 33 188 3.35e-25 101
MS.gene93096.t1 AT3G53280 32.105 190 122 4 3 188 19 205 3.52e-25 101
MS.gene93096.t1 AT3G26200 31.746 189 124 2 3 188 19 205 8.30e-25 100
MS.gene93096.t1 AT2G30750 34.659 176 114 1 13 188 34 208 1.77e-24 99.8
MS.gene93096.t1 AT5G10600 32.500 160 106 2 10 167 44 203 2.92e-24 99.4
MS.gene93096.t1 AT5G36220 33.511 188 113 5 13 188 34 221 3.39e-24 99.0
MS.gene93096.t1 AT4G37370 32.812 192 120 4 4 188 25 214 5.28e-24 98.2
MS.gene93096.t1 AT3G26180 30.573 157 109 0 13 169 31 187 6.29e-24 98.2
MS.gene93096.t1 AT2G02580 31.875 160 109 0 12 171 31 190 6.76e-24 98.2
MS.gene93096.t1 AT3G26220 35.294 153 99 0 13 165 30 182 1.25e-23 97.4
MS.gene93096.t1 AT4G31940 33.129 163 100 3 14 167 33 195 1.40e-23 97.4
MS.gene93096.t1 AT3G26210 34.459 148 97 0 19 166 38 185 1.53e-23 97.1
MS.gene93096.t1 AT1G33720 28.492 179 127 1 1 178 27 205 2.14e-23 96.7
MS.gene93096.t1 AT4G37360 31.522 184 118 4 13 188 31 214 2.25e-23 96.7
MS.gene93096.t1 AT5G67310 29.834 181 120 4 13 188 43 221 2.76e-23 96.3
MS.gene93096.t1 AT5G42590 32.727 165 111 0 13 177 33 197 4.40e-23 95.9
MS.gene93096.t1 AT5G04330 29.299 157 108 2 9 165 29 182 1.56e-22 94.4
MS.gene93096.t1 AT5G07990 28.947 190 128 3 1 188 25 209 2.48e-22 93.6
MS.gene93096.t1 AT3G20960 31.579 152 104 0 37 188 67 218 2.98e-22 93.6
MS.gene93096.t1 AT2G23190 30.508 177 118 3 9 182 75 249 6.55e-22 92.4
MS.gene93096.t1 AT4G37400 31.481 162 108 2 21 181 40 199 7.10e-22 92.4
MS.gene93096.t1 AT2G45570 29.697 165 115 1 19 182 45 209 8.35e-22 92.0
MS.gene93096.t1 AT4G31500 26.623 154 112 1 13 165 30 183 9.46e-22 92.0
MS.gene93096.t1 AT5G24960 32.061 131 89 0 13 143 34 164 1.68e-21 90.9
MS.gene93096.t1 AT4G12310 31.387 137 94 0 19 155 51 187 2.45e-21 90.9
MS.gene93096.t1 AT5G24960 32.061 131 89 0 13 143 34 164 3.00e-21 90.5
MS.gene93096.t1 AT1G01280 32.450 151 102 0 19 169 39 189 3.25e-21 90.5
MS.gene93096.t1 AT2G25160 30.198 202 120 7 1 188 28 222 4.82e-21 89.7
MS.gene93096.t1 AT3G26160 28.571 154 110 0 13 166 31 184 5.24e-21 89.7
MS.gene93096.t1 AT2G25160 30.198 202 120 7 1 188 28 222 5.87e-21 89.7
MS.gene93096.t1 AT4G37330 31.868 182 117 6 13 188 32 212 6.79e-21 89.7
MS.gene93096.t1 AT4G37320 31.053 190 124 4 2 188 26 211 7.25e-21 89.4
MS.gene93096.t1 AT4G15330 31.250 176 92 2 14 188 40 187 7.42e-21 89.4
MS.gene93096.t1 AT3G53300 28.804 184 127 2 9 188 22 205 1.09e-20 89.0
MS.gene93096.t1 AT3G26830 29.143 175 123 1 13 186 29 203 1.93e-20 88.2
MS.gene93096.t1 AT3G26270 26.257 179 127 2 13 188 33 209 2.00e-20 88.2
MS.gene93096.t1 AT3G25180 30.818 159 107 2 14 169 40 198 2.03e-20 88.2
MS.gene93096.t1 AT1G74550 31.677 161 101 3 13 169 28 183 2.20e-20 88.2
MS.gene93096.t1 AT4G22710 27.389 157 113 1 21 176 62 218 2.32e-20 88.2
MS.gene93096.t1 AT3G25180 30.818 159 107 2 14 169 40 198 2.71e-20 87.4
MS.gene93096.t1 AT4G22690 27.389 157 113 1 21 176 93 249 5.94e-20 87.0
MS.gene93096.t1 AT3G26230 31.373 153 105 0 13 165 27 179 8.03e-20 86.7
MS.gene93096.t1 AT3G52970 25.281 178 130 2 2 178 29 204 8.76e-20 86.3
MS.gene93096.t1 AT4G36220 26.506 166 117 3 20 185 48 208 1.13e-19 86.3
MS.gene93096.t1 AT5G44620 27.517 149 108 0 19 167 53 201 1.36e-19 85.9
MS.gene93096.t1 AT4G15380 30.921 152 100 1 37 188 68 214 1.63e-19 85.5
MS.gene93096.t1 AT4G12330 25.000 168 123 2 19 184 53 219 6.94e-19 84.0
MS.gene93096.t1 AT3G20130 32.540 126 85 0 63 188 66 191 7.60e-19 83.6
MS.gene93096.t1 AT1G28430 30.247 162 110 3 23 182 51 211 1.35e-18 83.2
MS.gene93096.t1 AT4G37310 35.135 185 111 5 13 188 31 215 1.49e-18 82.8
MS.gene93096.t1 AT1G13100 30.435 161 106 2 22 179 38 195 1.67e-18 82.8
MS.gene93096.t1 AT3G61040 25.862 174 129 0 4 177 25 198 2.06e-18 82.0
MS.gene93096.t1 AT3G26150 26.752 157 115 0 13 169 31 187 2.84e-18 82.0
MS.gene93096.t1 AT3G61040 25.862 174 129 0 4 177 25 198 3.08e-18 82.0
MS.gene93096.t1 AT2G23220 31.016 187 120 4 9 188 46 230 3.30e-18 82.0
MS.gene93096.t1 AT4G13770 25.974 154 113 1 13 165 31 184 4.91e-18 81.3
MS.gene93096.t1 AT3G52970 23.560 191 129 2 3 178 30 218 6.56e-18 80.9
MS.gene93096.t1 AT2G40890 25.824 182 127 3 13 186 28 209 1.01e-17 80.5
MS.gene93096.t1 AT4G20235 31.034 145 95 2 3 142 22 166 1.54e-16 76.6
MS.gene93096.t1 AT2G45580 26.708 161 118 0 19 179 45 205 5.97e-16 75.5
MS.gene93096.t1 AT2G45580 26.708 161 118 0 19 179 45 205 7.60e-16 74.7
MS.gene93096.t1 AT3G28740 31.016 187 120 4 9 188 39 223 4.89e-15 72.8
MS.gene93096.t1 AT1G74540 25.946 185 121 5 13 188 28 205 2.27e-14 70.9
MS.gene93096.t1 AT5G25900 36.111 108 68 1 11 117 42 149 4.68e-14 70.1
MS.gene93096.t1 AT2G27010 27.273 165 101 3 23 186 46 192 9.79e-14 68.9
MS.gene93096.t1 AT3G10560 25.281 178 123 5 13 185 47 219 4.83e-13 67.0
MS.gene93096.t1 AT3G20960 30.435 115 80 0 74 188 1 115 8.49e-13 66.2
MS.gene93096.t1 AT5G05260 24.118 170 114 4 13 170 41 207 1.46e-12 65.5
MS.gene93096.t1 AT5G05260 24.118 170 114 4 13 170 41 207 1.53e-12 65.5
MS.gene93096.t1 AT4G31950 29.448 163 94 6 14 167 33 183 2.82e-12 64.7
MS.gene93096.t1 AT2G22330 25.543 184 131 2 1 184 51 228 1.08e-11 63.2
MS.gene93096.t1 AT2G22330 25.543 184 131 2 1 184 74 251 1.23e-11 62.8
MS.gene93096.t1 AT3G26180 34.483 87 53 1 13 95 31 117 1.88e-11 62.0
MS.gene93096.t1 AT1G58260 23.494 166 115 4 13 169 38 200 4.42e-11 61.2

Find 0 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTCCAACAACATAATATCA+CGG - 10971:22950-22969 MS.gene93096:CDS 25.0%
AACTTTGGCAAATAAGTCTA+AGG - 10971:22888-22907 MS.gene93096:CDS 30.0%
AATGAATTCATGGAGTTCTT+GGG + 10971:22866-22885 MS.gene93096:intergenic 30.0%
AGATGAAGATGTCCAATTAT+TGG + 10971:22538-22557 MS.gene93096:intergenic 30.0%
CCAAAGTTTGAATGAATTCA+TGG + 10971:22876-22895 MS.gene93096:intergenic 30.0%
CCATGAATTCATTCAAACTT+TGG - 10971:22873-22892 MS.gene93096:CDS 30.0%
TATTAAAGGGCCATATTGAT+CGG + 10971:22599-22618 MS.gene93096:intergenic 30.0%
AATTTCCAATACGTCCCATA+AGG + 10971:22775-22794 MS.gene93096:intergenic 35.0%
AGCAAAAGTTGCATCATCAT+AGG + 10971:22746-22765 MS.gene93096:intergenic 35.0%
ATAACCAAGCAGAACAAGTT+AGG - 10971:23004-23023 MS.gene93096:CDS 35.0%
ATCATAGGCAACTACATTGA+TGG + 10971:22731-22750 MS.gene93096:intergenic 35.0%
ATTTCCAATACGTCCCATAA+GGG + 10971:22774-22793 MS.gene93096:intergenic 35.0%
CAAGTCGAAGGGATATTAAA+GGG + 10971:22612-22631 MS.gene93096:intergenic 35.0%
CATCCGTGATATTATGTTGT+TGG + 10971:22956-22975 MS.gene93096:intergenic 35.0%
GAATGAATTCATGGAGTTCT+TGG + 10971:22867-22886 MS.gene93096:intergenic 35.0%
TAACCAAGCAGAACAAGTTA+GGG - 10971:23005-23024 MS.gene93096:CDS 35.0%
TGTCCAATTATTGGTATTGC+TGG + 10971:22529-22548 MS.gene93096:intergenic 35.0%
! TGATGGCTATGCTCATTTTA+CGG + 10971:22714-22733 MS.gene93096:intergenic 35.0%
!! ATGTTGAGTATTGATTGCTC+AGG - 10971:22976-22995 MS.gene93096:CDS 35.0%
AATCGGTAGAAATTGCGACA+TGG + 10971:22839-22858 MS.gene93096:intergenic 40.0%
ATGTGTCTTGAGGAACTCTT+TGG + 10971:22674-22693 MS.gene93096:intergenic 40.0%
CCAAGTCGAAGGGATATTAA+AGG + 10971:22613-22632 MS.gene93096:intergenic 40.0%
CCAATTATTGGTATTGCTGG+TGG + 10971:22526-22545 MS.gene93096:intergenic 40.0%
CCACCAGCAATACCAATAAT+TGG - 10971:22523-22542 MS.gene93096:CDS 40.0%
CCTTTAATATCCCTTCGACT+TGG - 10971:22610-22629 MS.gene93096:CDS 40.0%
GCTTTATCAAAGCTTGTGTG+AGG + 10971:22930-22949 MS.gene93096:intergenic 40.0%
TGTGAGGTTCACACTTTCTT+CGG + 10971:22914-22933 MS.gene93096:intergenic 40.0%
TTTCCAATACGTCCCATAAG+GGG + 10971:22773-22792 MS.gene93096:intergenic 40.0%
AAGTGAGCTCATGTGTCTTG+AGG + 10971:22684-22703 MS.gene93096:intergenic 45.0%
AGCAGAACAAGTTAGGGCTT+TGG - 10971:23011-23030 MS.gene93096:CDS 45.0%
ATTGAGAAGAGCCAAGTCGA+AGG + 10971:22624-22643 MS.gene93096:intergenic 45.0%
CCTCAAACCACTCATTCATC+AGG - 10971:22558-22577 MS.gene93096:CDS 45.0%
CCTGATGAATGAGTGGTTTG+AGG + 10971:22561-22580 MS.gene93096:intergenic 45.0%
TGGAGTTCTTGGGTTCGAAT+CGG + 10971:22856-22875 MS.gene93096:intergenic 45.0%
TTGAGAAGAGCCAAGTCGAA+GGG + 10971:22623-22642 MS.gene93096:intergenic 45.0%
! ACTTTTGCTTTCGCCCCTTA+TGG - 10971:22757-22776 MS.gene93096:CDS 45.0%
! CTTTTGCTTTCGCCCCTTAT+GGG - 10971:22758-22777 MS.gene93096:CDS 45.0%
!! AAGCCCTAACTTGTTCTGCT+TGG + 10971:23011-23030 MS.gene93096:intergenic 45.0%
!! ATTGGTATTGCTGGTGGACT+TGG + 10971:22520-22539 MS.gene93096:intergenic 45.0%
AAGGGCCATATTGATCGGAG+AGG + 10971:22594-22613 MS.gene93096:intergenic 50.0%
AGGAACTCTTTGGCGAGTGA+TGG + 10971:22664-22683 MS.gene93096:intergenic 50.0%
CGAAAGGCCTGATGAATGAG+TGG + 10971:22568-22587 MS.gene93096:intergenic 50.0%
TCGATTACCCAAGAGCTCAG+TGG + 10971:22815-22834 MS.gene93096:intergenic 50.0%
!! GTATTGCTGGTGGACTTGGA+GGG + 10971:22516-22535 MS.gene93096:intergenic 50.0%
CGCCACCTCTCCGATCAATA+TGG - 10971:22586-22605 MS.gene93096:CDS 55.0%
CTCAGCACCACTGAGCTCTT+GGG - 10971:22805-22824 MS.gene93096:CDS 55.0%
GGCCATATTGATCGGAGAGG+TGG + 10971:22591-22610 MS.gene93096:intergenic 55.0%
TCGCCCCTTATGGGACGTAT+TGG - 10971:22767-22786 MS.gene93096:CDS 55.0%
TTGATCGGAGAGGTGGCGAA+AGG + 10971:22584-22603 MS.gene93096:intergenic 55.0%
!! GGTATTGCTGGTGGACTTGG+AGG + 10971:22517-22536 MS.gene93096:intergenic 55.0%
GCTCAGCACCACTGAGCTCT+TGG - 10971:22804-22823 MS.gene93096:CDS 60.0%
GGAGGGTGAGGTGGTAATCG+TGG + 10971:22499-22518 MS.gene93096:intergenic 60.0%
! GGTGGACTTGGAGGGTGAGG+TGG + 10971:22508-22527 MS.gene93096:intergenic 65.0%
!! GCTGGTGGACTTGGAGGGTG+AGG + 10971:22511-22530 MS.gene93096:intergenic 65.0%


Chromosome Type Strat End Strand Name
10971 gene 22478 23041 22478 ID=MS.gene93096
10971 mRNA 22478 23041 22478 ID=MS.gene93096.t1;Parent=MS.gene93096
10971 exon 22478 23041 22478 ID=MS.gene93096.t1.exon1;Parent=MS.gene93096.t1
10971 CDS 22478 23041 22478 ID=cds.MS.gene93096.t1;Parent=MS.gene93096.t1
Gene Sequence

>MS.gene93096

AGAAACAAGAAGTCGCATCCACGATTACCACCTCACCCTCCAAGTCCACCAGCAATACCAATAATTGGACATCTTCATCTCCTCAAACCACTCATTCATCAGGCCTTTCGCCACCTCTCCGATCAATATGGCCCTTTAATATCCCTTCGACTTGGCTCTTCTCAATTTATCATTGTTAACACTCCATCACTCGCCAAAGAGTTCCTCAAGACACATGAGCTCACTTATTCACACCGTAAAATGAGCATAGCCATCAATGTAGTTGCCTATGATGATGCAACTTTTGCTTTCGCCCCTTATGGGACGTATTGGAAATTTATTAAAAAGCTCAGCACCACTGAGCTCTTGGGTAATCGAACCATGTCGCAATTTCTACCGATTCGAACCCAAGAACTCCATGAATTCATTCAAACTTTGGCAAATAAGTCTAAGGCCGAAGAAAGTGTGAACCTCACACAAGCTTTGATAAAGCTTTCCAACAACATAATATCACGGATGATGTTGAGTATTGATTGCTCAGGAACAGATAACCAAGCAGAACAAGTTAGGGCTTTGGTTCGCGAG

Protein sequence

>MS.gene93096.t1

RNKKSHPRLPPHPPSPPAIPIIGHLHLLKPLIHQAFRHLSDQYGPLISLRLGSSQFIIVNTPSLAKEFLKTHELTYSHRKMSIAINVVAYDDATFAFAPYGTYWKFIKKLSTTELLGNRTMSQFLPIRTQELHEFIQTLANKSKAEESVNLTQALIKLSNNIISRMMLSIDCSGTDNQAEQVRALVRE