Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96322.t1 | XP_003610031.2 | 80 | 414 | 79 | 1 | 1 | 414 | 1 | 410 | 2.60E-115 | 425.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96322.t1 | E9Q5C9 | 51.4 | 74 | 35 | 1 | 336 | 409 | 628 | 700 | 5.4e-13 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96322.t1 | G7JTA4 | 80.0 | 414 | 79 | 1 | 1 | 414 | 1 | 410 | 1.9e-115 | 425.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene96322 | 0.851552 | 8.24E-61 | -1.69E-46 |
| MS.gene049341 | MS.gene96322 | 0.822256 | 2.61E-53 | -1.69E-46 |
| MS.gene049580 | MS.gene96322 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene049756 | MS.gene96322 | 0.802957 | 4.38E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene96322 | 0.801236 | 9.91E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene96322 | 0.856225 | 3.71E-62 | -1.69E-46 |
| MS.gene049825 | MS.gene96322 | 0.866369 | 3.00E-65 | -1.69E-46 |
| MS.gene049873 | MS.gene96322 | 0.857257 | 1.85E-62 | -1.69E-46 |
| MS.gene050277 | MS.gene96322 | 0.881519 | 2.24E-70 | -1.69E-46 |
| MS.gene050303 | MS.gene96322 | 0.871227 | 8.03E-67 | -1.69E-46 |
| MS.gene050689 | MS.gene96322 | 0.816834 | 4.51E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene96322 | 0.838196 | 3.32E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene96322 | 0.848969 | 4.37E-60 | -1.69E-46 |
| MS.gene051003 | MS.gene96322 | 0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene96322 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene96322 | 0.857327 | 1.76E-62 | -1.69E-46 |
| MS.gene051330 | MS.gene96322 | 0.861107 | 1.29E-63 | -1.69E-46 |
| MS.gene05134 | MS.gene96322 | 0.867529 | 1.28E-65 | -1.69E-46 |
| MS.gene051363 | MS.gene96322 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene051451 | MS.gene96322 | 0.840981 | 6.26E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene96322 | 0.823525 | 1.32E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene96322 | 0.850223 | 1.95E-60 | -1.69E-46 |
| MS.gene051746 | MS.gene96322 | 0.852194 | 5.42E-61 | -1.69E-46 |
| MS.gene051748 | MS.gene96322 | 0.830021 | 3.71E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene96322 | 0.835034 | 2.12E-56 | -1.69E-46 |
| MS.gene051850 | MS.gene96322 | 0.815237 | 1.02E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene96322 | 0.894981 | 1.48E-75 | -1.69E-46 |
| MS.gene051903 | MS.gene96322 | 0.855805 | 4.93E-62 | -1.69E-46 |
| MS.gene051975 | MS.gene96322 | 0.84396 | 1.02E-58 | -1.69E-46 |
| MS.gene052133 | MS.gene96322 | 0.810643 | 1.04E-50 | -1.69E-46 |
| MS.gene052286 | MS.gene96322 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene96322 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene96322 | 0.901985 | 1.54E-78 | -1.69E-46 |
| MS.gene053058 | MS.gene96322 | 0.819886 | 9.18E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene96322 | 0.837385 | 5.36E-57 | -1.69E-46 |
| MS.gene053109 | MS.gene96322 | 0.820972 | 5.17E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene96322 | 0.84276 | 2.12E-58 | -1.69E-46 |
| MS.gene053195 | MS.gene96322 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene96322 | 0.849133 | 3.93E-60 | -1.69E-46 |
| MS.gene053294 | MS.gene96322 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene96322 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene05364 | MS.gene96322 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene96322 | 0.812431 | 4.25E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene96322 | 0.822227 | 2.65E-53 | -1.69E-46 |
| MS.gene055424 | MS.gene96322 | 0.821982 | 3.02E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene96322 | 0.810932 | 9.01E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene96322 | 0.817986 | 2.48E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene96322 | 0.842211 | 2.97E-58 | -1.69E-46 |
| MS.gene055580 | MS.gene96322 | -0.831645 | 1.48E-55 | -1.69E-46 |
| MS.gene055808 | MS.gene96322 | 0.886445 | 3.40E-72 | -1.69E-46 |
| MS.gene056043 | MS.gene96322 | -0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene056075 | MS.gene96322 | 0.832858 | 7.44E-56 | -1.69E-46 |
| MS.gene056091 | MS.gene96322 | 0.869062 | 4.10E-66 | -1.69E-46 |
| MS.gene056215 | MS.gene96322 | 0.846649 | 1.90E-59 | -1.69E-46 |
| MS.gene056403 | MS.gene96322 | 0.849959 | 2.31E-60 | -1.69E-46 |
| MS.gene056432 | MS.gene96322 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene96322 | 0.818314 | 2.09E-52 | -1.69E-46 |
| MS.gene056601 | MS.gene96322 | 0.811032 | 8.57E-51 | -1.69E-46 |
| MS.gene056605 | MS.gene96322 | 0.849959 | 2.31E-60 | -1.69E-46 |
| MS.gene056631 | MS.gene96322 | 0.890129 | 1.30E-73 | -1.69E-46 |
| MS.gene05689 | MS.gene96322 | 0.845861 | 3.12E-59 | -1.69E-46 |
| MS.gene056986 | MS.gene96322 | 0.840859 | 6.75E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene96322 | 0.818843 | 1.59E-52 | -1.69E-46 |
| MS.gene057079 | MS.gene96322 | 0.805986 | 1.02E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene96322 | 0.861045 | 1.35E-63 | -1.69E-46 |
| MS.gene057140 | MS.gene96322 | 0.840892 | 6.61E-58 | -1.69E-46 |
| MS.gene057234 | MS.gene96322 | 0.84329 | 1.53E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene96322 | 0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene96322 | 0.866329 | 3.09E-65 | -1.69E-46 |
| MS.gene05781 | MS.gene96322 | 0.815295 | 9.95E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene96322 | 0.820052 | 8.41E-53 | -1.69E-46 |
| MS.gene058084 | MS.gene96322 | 0.834458 | 2.96E-56 | -1.69E-46 |
| MS.gene058238 | MS.gene96322 | 0.834141 | 3.56E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene96322 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene96322 | 0.838852 | 2.25E-57 | -1.69E-46 |
| MS.gene059146 | MS.gene96322 | 0.831813 | 1.35E-55 | -1.69E-46 |
| MS.gene059227 | MS.gene96322 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene059317 | MS.gene96322 | 0.819888 | 9.17E-53 | -1.69E-46 |
| MS.gene05953 | MS.gene96322 | 0.817684 | 2.90E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene96322 | 0.854551 | 1.14E-61 | -1.69E-46 |
| MS.gene05978 | MS.gene96322 | 0.831719 | 1.42E-55 | -1.69E-46 |
| MS.gene05979 | MS.gene96322 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene96322 | 0.820159 | 7.95E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene96322 | 0.817327 | 3.49E-52 | -1.69E-46 |
| MS.gene059898 | MS.gene96322 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene96322 | 0.830019 | 3.72E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene96322 | 0.90255 | 8.65E-79 | -1.69E-46 |
| MS.gene06011 | MS.gene96322 | 0.867349 | 1.46E-65 | -1.69E-46 |
| MS.gene060365 | MS.gene96322 | 0.812975 | 3.23E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene96322 | 0.905701 | 3.25E-80 | -1.69E-46 |
| MS.gene060586 | MS.gene96322 | 0.864029 | 1.63E-64 | -1.69E-46 |
| MS.gene060587 | MS.gene96322 | 0.816774 | 4.65E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene96322 | 0.886642 | 2.86E-72 | -1.69E-46 |
| MS.gene060830 | MS.gene96322 | 0.872873 | 2.27E-67 | -1.69E-46 |
| MS.gene060907 | MS.gene96322 | 0.802079 | 6.65E-49 | -1.69E-46 |
| MS.gene060917 | MS.gene96322 | 0.83292 | 7.18E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96322.t1 | MTR_4g127160 | 94.203 | 414 | 20 | 1 | 1 | 414 | 1 | 410 | 0.0 | 697 |
| MS.gene96322.t1 | MTR_4g127160 | 93.623 | 345 | 18 | 1 | 70 | 414 | 1 | 341 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96322.t1 | AT5G57120 | 52.518 | 139 | 52 | 3 | 283 | 414 | 168 | 299 | 1.25e-32 | 125 |
Find 81 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTTCTGTTCAGAGTTT+TGG | 0.148789 | 8.3:-3821397 | None:intergenic |
| AGAGATGTGCCGCAAATATT+TGG | 0.244302 | 8.3:+3822985 | MS.gene96322:CDS |
| AGAAAATATGAGTGAATCTA+AGG | 0.253918 | 8.3:+3824430 | MS.gene96322:CDS |
| ATAGGTCCCACGTTTCTTCT+TGG | 0.273117 | 8.3:-3826818 | None:intergenic |
| TTGATACCTGATGGATTTGC+AGG | 0.274555 | 8.3:-3821302 | None:intergenic |
| TTTAGAATCTTTCTTCTCTT+CGG | 0.275506 | 8.3:-3824324 | None:intergenic |
| CCAATCAATTGCTCTTTACT+TGG | 0.280678 | 8.3:+3821433 | MS.gene96322:CDS |
| CGACCAATTTCTAAAGAAAA+TGG | 0.291399 | 8.3:+3824356 | MS.gene96322:CDS |
| TTAGAATCTTTCTTCTCTTC+GGG | 0.299169 | 8.3:-3824323 | None:intergenic |
| TTCTTCATCTGCCTTTATTT+CGG | 0.320467 | 8.3:-3824390 | None:intergenic |
| GCTTCTTCATTTGTTGCATC+GGG | 0.340551 | 8.3:-3824296 | None:intergenic |
| ATAGATGCCAAAGTTGAAAA+TGG | 0.340694 | 8.3:+3824185 | MS.gene96322:CDS |
| TGCTTCTTCATTTGTTGCAT+CGG | 0.340775 | 8.3:-3824297 | None:intergenic |
| ATTTGTTGATGAGAGGCTTC+AGG | 0.356972 | 8.3:+3826198 | MS.gene96322:CDS |
| AGAAGAAACGTGGGACCTAT+AGG | 0.367724 | 8.3:+3826821 | MS.gene96322:CDS |
| GAAGAAACGTGGGACCTATA+GGG | 0.375824 | 8.3:+3826822 | MS.gene96322:CDS |
| CCAAGTAAAGAGCAATTGAT+TGG | 0.380181 | 8.3:-3821433 | None:intergenic |
| GGCTTCAGGATAACTCATAT+TGG | 0.387596 | 8.3:+3826212 | MS.gene96322:CDS |
| TGCTCTTTACTTGGAACGCT+CGG | 0.400334 | 8.3:+3821442 | MS.gene96322:CDS |
| CCACAGTTGGTGACTCCAAT+TGG | 0.405640 | 8.3:-3823989 | None:intergenic |
| GATGGCGCCGAGAGTGGTTA+TGG | 0.413963 | 8.3:+3826327 | MS.gene96322:CDS |
| CGTTGAAATGCTGCCTTCAC+TGG | 0.414815 | 8.3:-3826154 | None:intergenic |
| CTCAGCACCATTATCAACTT+TGG | 0.421101 | 8.3:-3824051 | None:intergenic |
| TGAACAAGATACCGAAATAA+AGG | 0.423978 | 8.3:+3824379 | MS.gene96322:CDS |
| ACAGATGCCAAAGTTGATAA+TGG | 0.427492 | 8.3:+3824044 | MS.gene96322:CDS |
| CAAACGGGCTTTCTGAGAAT+GGG | 0.440258 | 8.3:+3824474 | MS.gene96322:CDS |
| GCAAAAGCAGAAGAAATTCT+TGG | 0.442256 | 8.3:+3826351 | MS.gene96322:CDS |
| TCAAACGGGCTTTCTGAGAA+TGG | 0.443793 | 8.3:+3824473 | MS.gene96322:CDS |
| GACCAATCAGCAAAATCAAA+CGG | 0.445985 | 8.3:+3824458 | MS.gene96322:CDS |
| ACCATGTTTCCAAATATTTG+CGG | 0.446237 | 8.3:-3822994 | None:intergenic |
| GCTTCAGGATAACTCATATT+GGG | 0.455100 | 8.3:+3826213 | MS.gene96322:CDS |
| ATCAATAAGTCCACCCCTAT+AGG | 0.468521 | 8.3:-3826836 | None:intergenic |
| GGAGTGAAAGTGAAGAGGGT+TGG | 0.475645 | 8.3:-3821332 | None:intergenic |
| CGTATGCCTGCAAATCCATC+AGG | 0.484539 | 8.3:+3821296 | None:intergenic |
| AACAATAAGTCAAATATTGA+AGG | 0.491836 | 8.3:+3824107 | MS.gene96322:CDS |
| TTCATCTCTCTTCAGTAGCA+AGG | 0.496685 | 8.3:+3823673 | MS.gene96322:intron |
| ACCAATCAGCAAAATCAAAC+GGG | 0.497516 | 8.3:+3824459 | MS.gene96322:CDS |
| AGTTACAGAAAATAAAGTTA+AGG | 0.498586 | 8.3:+3824151 | MS.gene96322:CDS |
| TAATGTGGAAGACAACCAAT+TGG | 0.510929 | 8.3:+3823974 | MS.gene96322:CDS |
| CTGCAGGATGGCGCCGAGAG+TGG | 0.518486 | 8.3:+3826321 | MS.gene96322:intron |
| AATAATTAAACTTAACTGAG+TGG | 0.520249 | 8.3:-3826867 | None:intergenic |
| AAAGATAAGTCAACTAGTGA+AGG | 0.522771 | 8.3:+3824248 | MS.gene96322:CDS |
| GCTCTTTACTTGGAACGCTC+GGG | 0.525363 | 8.3:+3821443 | MS.gene96322:CDS |
| GGGGATGCAAAAGAGCAGAT+TGG | 0.539281 | 8.3:+3824269 | MS.gene96322:CDS |
| GGTTACAGAAAACAAAGTTA+AGG | 0.544978 | 8.3:+3824010 | MS.gene96322:CDS |
| ACAATAAGTCAAATATTGAA+GGG | 0.546642 | 8.3:+3824108 | MS.gene96322:CDS |
| GAAATTCTTGGTCAAGTCAG+AGG | 0.547509 | 8.3:+3826363 | MS.gene96322:CDS |
| GCCGCAAATATTTGGAAACA+TGG | 0.552046 | 8.3:+3822993 | MS.gene96322:CDS |
| TAAGTTTAATTATTCAGATG+AGG | 0.552944 | 8.3:+3826876 | MS.gene96322:CDS |
| AAGTAGAATTTGTTGATGAG+AGG | 0.558430 | 8.3:+3826191 | MS.gene96322:CDS |
| ATAATTAAACTTAACTGAGT+GGG | 0.560601 | 8.3:-3826866 | None:intergenic |
| AAGATAAGTCAACTAGTGAA+GGG | 0.563861 | 8.3:+3824249 | MS.gene96322:CDS |
| AAGAAACGTGGGACCTATAG+GGG | 0.566821 | 8.3:+3826823 | MS.gene96322:CDS |
| TCTCTCTGAAGCTAAAATTG+AGG | 0.572494 | 8.3:+3821490 | MS.gene96322:CDS |
| TGAATCTGTTGTTGATAATG+TGG | 0.576162 | 8.3:+3823959 | MS.gene96322:CDS |
| GAAAATATGAGTGAATCTAA+GGG | 0.576840 | 8.3:+3824431 | MS.gene96322:CDS |
| GTTTCTTCTTGGTCTTCTCG+TGG | 0.577810 | 8.3:-3826807 | None:intergenic |
| GACGAGGAGTGAAAGTGAAG+AGG | 0.595704 | 8.3:-3821337 | None:intergenic |
| ACGAGGAGTGAAAGTGAAGA+GGG | 0.599283 | 8.3:-3821336 | None:intergenic |
| CTTCTTCATTTGTTGCATCG+GGG | 0.605174 | 8.3:-3824295 | None:intergenic |
| GGATAACTCATATTGGGCAA+AGG | 0.615077 | 8.3:+3826219 | MS.gene96322:CDS |
| AATATGAGTGAATCTAAGGG+AGG | 0.616915 | 8.3:+3824434 | MS.gene96322:CDS |
| TTCTTGGTCAAGTCAGAGGA+AGG | 0.619626 | 8.3:+3826367 | MS.gene96322:CDS |
| CAATAAGTCAAATATTGAAG+GGG | 0.625288 | 8.3:+3824109 | MS.gene96322:CDS |
| AGCAATCGAACCATGAAGAA+CGG | 0.631910 | 8.3:+3821371 | MS.gene96322:CDS |
| AGATAAGTCAACTAGTGAAG+GGG | 0.632849 | 8.3:+3824250 | MS.gene96322:CDS |
| CAGATGAAGAAACCAAACGC+AGG | 0.637321 | 8.3:+3824402 | MS.gene96322:CDS |
| AAACGGGCTTTCTGAGAATG+GGG | 0.639535 | 8.3:+3824475 | MS.gene96322:CDS |
| GAGAAGACCAAGAAGAAACG+TGG | 0.639718 | 8.3:+3826811 | MS.gene96322:CDS |
| ATGGTGCTGAGACAGAGAAA+CGG | 0.644173 | 8.3:+3824063 | MS.gene96322:CDS |
| ATGCAGAACGATAATACAGA+GGG | 0.648262 | 8.3:+3822944 | MS.gene96322:intron |
| CCAATTGGAGTCACCAACTG+TGG | 0.648790 | 8.3:+3823989 | MS.gene96322:CDS |
| AATAAGTCAAATATTGAAGG+GGG | 0.651885 | 8.3:+3824110 | MS.gene96322:CDS |
| AGAAGACCAAGAAGAAACGT+GGG | 0.657801 | 8.3:+3826812 | MS.gene96322:CDS |
| AAACGTGGGACCTATAGGGG+TGG | 0.658830 | 8.3:+3826826 | MS.gene96322:CDS |
| ATGGTGCTGAGACAGAGAAG+AGG | 0.660400 | 8.3:+3824204 | MS.gene96322:CDS |
| AAAACATAAAGAATCATCTG+AGG | 0.668418 | 8.3:+3824532 | MS.gene96322:CDS |
| TTGCTTAACAAAACTTGACG+AGG | 0.675556 | 8.3:-3821353 | None:intergenic |
| GATGCAGAACGATAATACAG+AGG | 0.716767 | 8.3:+3822943 | MS.gene96322:intron |
| TAATACAGAGGGTTCCACAG+TGG | 0.729759 | 8.3:+3822955 | MS.gene96322:CDS |
| CATCTCTTCTAGATCCACTG+TGG | 0.742631 | 8.3:-3822969 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATAAAACAATTATAT+TGG | - | chr8.3:3826703-3826722 | None:intergenic | 10.0% |
| !! | TTTAATTGAAAATAAAAAGA+GGG | - | chr8.3:3824742-3824761 | None:intergenic | 10.0% |
| !! | TTTATTTATTATTTCATTCT+TGG | + | chr8.3:3826000-3826019 | MS.gene96322:intron | 10.0% |
| !!! | AAAAAATTCTGAATTTTTTT+TGG | + | chr8.3:3822344-3822363 | MS.gene96322:intron | 10.0% |
| !!! | GAATTATTTATTTTTTCTAA+GGG | + | chr8.3:3823779-3823798 | MS.gene96322:intron | 10.0% |
| !!! | TATAATATTTTGAATTTTTC+TGG | + | chr8.3:3822376-3822395 | MS.gene96322:intron | 10.0% |
| !!! | TTTTAATTGAAAATAAAAAG+AGG | - | chr8.3:3824743-3824762 | None:intergenic | 10.0% |
| !! | AACTTAAATTCAGTTTAAAT+AGG | - | chr8.3:3825433-3825452 | None:intergenic | 15.0% |
| !! | AGATAAACATATAAAGAAAT+TGG | - | chr8.3:3825909-3825928 | None:intergenic | 15.0% |
| !! | TAAAAGTTGACATATTTATA+GGG | - | chr8.3:3822087-3822106 | None:intergenic | 15.0% |
| !! | TACTTAAACTTAATTTAAGT+AGG | + | chr8.3:3825204-3825223 | MS.gene96322:intron | 15.0% |
| !! | TTAAGAGAATTTATACAAAA+GGG | + | chr8.3:3825677-3825696 | MS.gene96322:intron | 15.0% |
| !! | TTAATTGAAAATAAAAAGAG+GGG | - | chr8.3:3824741-3824760 | None:intergenic | 15.0% |
| !! | TTTAAGAGAATTTATACAAA+AGG | + | chr8.3:3825676-3825695 | MS.gene96322:intron | 15.0% |
| !!! | AGTCAACTATTTAATTTAAA+GGG | - | chr8.3:3825882-3825901 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTCATATGTATTT+AGG | + | chr8.3:3826056-3826075 | MS.gene96322:intron | 15.0% |
| !!! | CGAATTATTTATTTTTTCTA+AGG | + | chr8.3:3823778-3823797 | MS.gene96322:intron | 15.0% |
| !!! | GAAAATTAAATTTTATACGA+GGG | - | chr8.3:3824832-3824851 | None:intergenic | 15.0% |
| !!! | TAGTCAACTATTTAATTTAA+AGG | - | chr8.3:3825883-3825902 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr8.3:3822147-3822166 | None:intergenic | 15.0% |
| !!! | TGAAAATTAAATTTTATACG+AGG | - | chr8.3:3824833-3824852 | None:intergenic | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | + | chr8.3:3822460-3822479 | MS.gene96322:intron | 15.0% |
| !!! | TTATTGTTCTTTTTCTTTTT+GGG | - | chr8.3:3824095-3824114 | None:intergenic | 15.0% |
| !! | AAAGAATACGTATAAAAAGA+GGG | - | chr8.3:3824714-3824733 | None:intergenic | 20.0% |
| !! | AACAATAAGTCAAATATTGA+AGG | + | chr8.3:3824107-3824126 | MS.gene96322:CDS | 20.0% |
| !! | AATAATTAAACTTAACTGAG+TGG | - | chr8.3:3826870-3826889 | None:intergenic | 20.0% |
| !! | ACAATAAGTCAAATATTGAA+GGG | + | chr8.3:3824108-3824127 | MS.gene96322:CDS | 20.0% |
| !! | ACCAAAAAAGTAAAATAAGA+TGG | - | chr8.3:3826755-3826774 | None:intergenic | 20.0% |
| !! | AGAGTTTCTTAAAAATTCAT+GGG | + | chr8.3:3822044-3822063 | MS.gene96322:intron | 20.0% |
| !! | AGTTACAGAAAATAAAGTTA+AGG | + | chr8.3:3824151-3824170 | MS.gene96322:CDS | 20.0% |
| !! | ATAATTAAACTTAACTGAGT+GGG | - | chr8.3:3826869-3826888 | None:intergenic | 20.0% |
| !! | ATTATCTAAGAAATGTGTAT+GGG | + | chr8.3:3826289-3826308 | MS.gene96322:intron | 20.0% |
| !! | CTAAAAGTTGACATATTTAT+AGG | - | chr8.3:3822088-3822107 | None:intergenic | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | + | chr8.3:3822520-3822539 | MS.gene96322:intron | 20.0% |
| !! | GAAATAAAATTGTTTCACTA+CGG | - | chr8.3:3826408-3826427 | None:intergenic | 20.0% |
| !! | TAAAGAATACGTATAAAAAG+AGG | - | chr8.3:3824715-3824734 | None:intergenic | 20.0% |
| !! | TAAGTTTAATTATTCAGATG+AGG | + | chr8.3:3826876-3826895 | MS.gene96322:CDS | 20.0% |
| !! | TGAAACTATCATTATTGAAA+AGG | + | chr8.3:3825510-3825529 | MS.gene96322:intron | 20.0% |
| !! | TTTAATACAAGTGCAAATAT+TGG | - | chr8.3:3826430-3826449 | None:intergenic | 20.0% |
| !! | TTTCTATCTAGTAATTGATA+TGG | - | chr8.3:3823228-3823247 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr8.3:3822151-3822170 | MS.gene96322:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | - | chr8.3:3822456-3822475 | None:intergenic | 20.0% |
| !!! | AAGTTGAAGAAAAATTTTAG+AGG | + | chr8.3:3822488-3822507 | MS.gene96322:intron | 20.0% |
| !!! | AATATGTCAACTTTTAGTTT+TGG | + | chr8.3:3822091-3822110 | MS.gene96322:intron | 20.0% |
| !!! | ACAGTATGAAAATTTTATAG+CGG | - | chr8.3:3823308-3823327 | None:intergenic | 20.0% |
| !!! | ACCATCTTATTTTACTTTTT+TGG | + | chr8.3:3826751-3826770 | MS.gene96322:intron | 20.0% |
| !!! | AGTTGAAGAAAAATTTTAGA+GGG | + | chr8.3:3822489-3822508 | MS.gene96322:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr8.3:3822428-3822447 | MS.gene96322:intron | 20.0% |
| !!! | ATTTGTGTTTTTCTTGTTTA+TGG | + | chr8.3:3825042-3825061 | MS.gene96322:intron | 20.0% |
| !!! | CTTATTGTTCTTTTTCTTTT+TGG | - | chr8.3:3824096-3824115 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr8.3:3822148-3822167 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | + | chr8.3:3822459-3822478 | MS.gene96322:intron | 20.0% |
| !!! | TATAATTGTAATGTTGCTTT+TGG | + | chr8.3:3821589-3821608 | MS.gene96322:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr8.3:3822429-3822448 | MS.gene96322:intron | 20.0% |
| !!! | TTGCTTAAAACAATTTTCTA+TGG | + | chr8.3:3823357-3823376 | MS.gene96322:intron | 20.0% |
| !!! | TTGTATTTCTTATACAGTTT+TGG | + | chr8.3:3826033-3826052 | MS.gene96322:intron | 20.0% |
| !!! | TTTATACAAAAGGGTAATTT+TGG | + | chr8.3:3825686-3825705 | MS.gene96322:intron | 20.0% |
| !!! | TTTCTTTTTCATTTTACGTT+TGG | - | chr8.3:3824231-3824250 | None:intergenic | 20.0% |
| !!! | TTTTACAGCATTTTATAGTA+TGG | + | chr8.3:3823423-3823442 | MS.gene96322:intron | 20.0% |
| !!! | TTTTGGGTTAAATATGTTTT+TGG | - | chr8.3:3822547-3822566 | None:intergenic | 20.0% |
| ! | AAAACATAAAGAATCATCTG+AGG | + | chr8.3:3824532-3824551 | MS.gene96322:CDS | 25.0% |
| ! | AACATAAATCTTAGTTTCAG+TGG | - | chr8.3:3826094-3826113 | None:intergenic | 25.0% |
| ! | AAGAAATTTCGAAGCAAAAA+AGG | + | chr8.3:3824946-3824965 | MS.gene96322:intron | 25.0% |
| ! | AAGAATACGTATAAAAAGAG+GGG | - | chr8.3:3824713-3824732 | None:intergenic | 25.0% |
| ! | AATAAGTCAAATATTGAAGG+GGG | + | chr8.3:3824110-3824129 | MS.gene96322:CDS | 25.0% |
| ! | AATCTGATATTGAGAACTAT+GGG | + | chr8.3:3823541-3823560 | MS.gene96322:intron | 25.0% |
| ! | ACAGAAATGACAATACTAAT+TGG | - | chr8.3:3823616-3823635 | None:intergenic | 25.0% |
| ! | ACTGAAACTAAGATTTATGT+TGG | + | chr8.3:3826093-3826112 | MS.gene96322:intron | 25.0% |
| ! | ACTTTAGTATATTAAGAGGA+TGG | + | chr8.3:3821871-3821890 | MS.gene96322:intron | 25.0% |
| ! | AGAAAATATGAGTGAATCTA+AGG | + | chr8.3:3824430-3824449 | MS.gene96322:CDS | 25.0% |
| ! | AGCTGAATAAGACAATAAAA+GGG | - | chr8.3:3826678-3826697 | None:intergenic | 25.0% |
| ! | ATCTTATGAAAATAAGCTGA+AGG | - | chr8.3:3821791-3821810 | None:intergenic | 25.0% |
| ! | ATGTTATAAACAAGAGAGAT+AGG | - | chr8.3:3823758-3823777 | None:intergenic | 25.0% |
| ! | ATTCTATGTAATCTCAGTTT+AGG | + | chr8.3:3825302-3825321 | MS.gene96322:intron | 25.0% |
| ! | ATTTAACCCAAAATTCATTG+CGG | + | chr8.3:3822554-3822573 | MS.gene96322:intron | 25.0% |
| ! | ATTTCTTAGATAATGCAACT+GGG | - | chr8.3:3826283-3826302 | None:intergenic | 25.0% |
| ! | CAATAAGTCAAATATTGAAG+GGG | + | chr8.3:3824109-3824128 | MS.gene96322:CDS | 25.0% |
| ! | CAGAGTTTCTTAAAAATTCA+TGG | + | chr8.3:3822043-3822062 | MS.gene96322:intron | 25.0% |
| ! | CATGTAAACTTAGTTTAAGT+AGG | + | chr8.3:3825155-3825174 | MS.gene96322:intron | 25.0% |
| ! | CATTATCTAAGAAATGTGTA+TGG | + | chr8.3:3826288-3826307 | MS.gene96322:intron | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | + | chr8.3:3822519-3822538 | MS.gene96322:intron | 25.0% |
| ! | CTTCATTCATGAAAAAAGTT+CGG | + | chr8.3:3821973-3821992 | MS.gene96322:intron | 25.0% |
| ! | GAAAATATGAGTGAATCTAA+GGG | + | chr8.3:3824431-3824450 | MS.gene96322:CDS | 25.0% |
| ! | GATATATGTGTGAAAAATCT+GGG | - | chr8.3:3826630-3826649 | None:intergenic | 25.0% |
| ! | GGTTTACAAAAATGAATGAA+AGG | - | chr8.3:3826657-3826676 | None:intergenic | 25.0% |
| ! | TAAAACTTACCTAACATTTC+AGG | + | chr8.3:3825837-3825856 | MS.gene96322:intron | 25.0% |
| ! | TAAGTAATTATGTGCATACA+TGG | + | chr8.3:3822782-3822801 | MS.gene96322:intron | 25.0% |
| ! | TAGCTGAATAAGACAATAAA+AGG | - | chr8.3:3826679-3826698 | None:intergenic | 25.0% |
| ! | TATTCAAGAATTTATAGCAC+AGG | - | chr8.3:3825812-3825831 | None:intergenic | 25.0% |
| ! | TGTACTGTGTAGTTTATAAT+CGG | - | chr8.3:3823071-3823090 | None:intergenic | 25.0% |
| ! | TTACATAGAATCATTGAACA+AGG | - | chr8.3:3825293-3825312 | None:intergenic | 25.0% |
| ! | TTCATAGACAAGCTATAAAT+AGG | + | chr8.3:3826512-3826531 | MS.gene96322:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr8.3:3822119-3822138 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr8.3:3822118-3822137 | None:intergenic | 25.0% |
| !! | ATATTGGCAATTTTATGTAG+CGG | + | chr8.3:3823331-3823350 | MS.gene96322:intron | 25.0% |
| !! | CAGATTTTTCACACATATAT+CGG | + | chr8.3:3826629-3826648 | MS.gene96322:intron | 25.0% |
| !! | CTATGGAAAATTTGTTTGAT+GGG | + | chr8.3:3826579-3826598 | MS.gene96322:intron | 25.0% |
| !! | CTTAAAACAATTTTCTATGG+CGG | + | chr8.3:3823360-3823379 | MS.gene96322:intron | 25.0% |
| !! | GCTATAAAATTTTCATACTG+TGG | + | chr8.3:3823307-3823326 | MS.gene96322:intron | 25.0% |
| !! | TAATTGATATGGTTGATACA+TGG | - | chr8.3:3823217-3823236 | None:intergenic | 25.0% |
| !! | TCTATGGAAAATTTGTTTGA+TGG | + | chr8.3:3826578-3826597 | MS.gene96322:intron | 25.0% |
| !! | TTTAGAATCTTTCTTCTCTT+CGG | - | chr8.3:3824327-3824346 | None:intergenic | 25.0% |
| !! | TTTCTTTTTCTTTTTTCCCT+TGG | - | chr8.3:3823925-3823944 | None:intergenic | 25.0% |
| !!! | TCACCATTTTCTTTAGAAAT+TGG | - | chr8.3:3824362-3824381 | None:intergenic | 25.0% |
| !!! | TCATGGGTTAAATATGTTTT+TGG | + | chr8.3:3822060-3822079 | MS.gene96322:intron | 25.0% |
| !!! | TTTTTCATTGTTTTTCTGCT+AGG | + | chr8.3:3821618-3821637 | MS.gene96322:intron | 25.0% |
| AAAGATAAGTCAACTAGTGA+AGG | + | chr8.3:3824248-3824267 | MS.gene96322:CDS | 30.0% | |
| AAATGATGAGGAAAAATCCA+AGG | + | chr8.3:3823905-3823924 | MS.gene96322:CDS | 30.0% | |
| AAATGCTATAGCAAGATCAT+AGG | - | chr8.3:3823497-3823516 | None:intergenic | 30.0% | |
| AAGATAAGTCAACTAGTGAA+GGG | + | chr8.3:3824249-3824268 | MS.gene96322:CDS | 30.0% | |
| AATGACAATACTAATTGGTG+TGG | - | chr8.3:3823611-3823630 | None:intergenic | 30.0% | |
| AATGATGAGGAAAAATCCAA+GGG | + | chr8.3:3823906-3823925 | MS.gene96322:CDS | 30.0% | |
| AATTACACCCTTTATAATCC+TGG | + | chr8.3:3824782-3824801 | MS.gene96322:intron | 30.0% | |
| AATTTCGAAGCAAAAAAGGT+TGG | + | chr8.3:3824950-3824969 | MS.gene96322:intron | 30.0% | |
| ACACAATAACCTGAAATGTT+AGG | - | chr8.3:3825849-3825868 | None:intergenic | 30.0% | |
| ACACCAAATATTTCTCTTAC+AGG | + | chr8.3:3826776-3826795 | MS.gene96322:intron | 30.0% | |
| ACATAGATTGATTGAACATC+AGG | + | chr8.3:3825601-3825620 | MS.gene96322:intron | 30.0% | |
| ACATTCGCAATGCAAATATA+TGG | - | chr8.3:3822685-3822704 | None:intergenic | 30.0% | |
| ACCATGTTTCCAAATATTTG+CGG | - | chr8.3:3822997-3823016 | None:intergenic | 30.0% | |
| AGGTATGTACATGTAAACTT+AGG | + | chr8.3:3825322-3825341 | MS.gene96322:intron | 30.0% | |
| AGTGACTATGAATGAAATCA+AGG | + | chr8.3:3825652-3825671 | MS.gene96322:intron | 30.0% | |
| ATAGATGCCAAAGTTGAAAA+TGG | + | chr8.3:3824185-3824204 | MS.gene96322:CDS | 30.0% | |
| ATCCCTGTAAGAGAAATATT+TGG | - | chr8.3:3826782-3826801 | None:intergenic | 30.0% | |
| ATCGATTATGTTCTTGTCAT+GGG | + | chr8.3:3824989-3825008 | MS.gene96322:intron | 30.0% | |
| CAATCTGATATTGAGAACTA+TGG | + | chr8.3:3823540-3823559 | MS.gene96322:intron | 30.0% | |
| CAATTACTAGATAGAAAGCT+TGG | + | chr8.3:3823231-3823250 | MS.gene96322:intron | 30.0% | |
| CACCAAATATTTCTCTTACA+GGG | + | chr8.3:3826777-3826796 | MS.gene96322:intron | 30.0% | |
| CATTTCTTAGATAATGCAAC+TGG | - | chr8.3:3826284-3826303 | None:intergenic | 30.0% | |
| CGATATATGTGTGAAAAATC+TGG | - | chr8.3:3826631-3826650 | None:intergenic | 30.0% | |
| GCTTATAGCTAATGTGAAAA+AGG | + | chr8.3:3821834-3821853 | MS.gene96322:intron | 30.0% | |
| GGTGACTTTAGTATATTAAG+AGG | + | chr8.3:3821867-3821886 | MS.gene96322:intron | 30.0% | |
| GGTTACAGAAAACAAAGTTA+AGG | + | chr8.3:3824010-3824029 | MS.gene96322:CDS | 30.0% | |
| TCACCGTTCAATAACAAATT+TGG | + | chr8.3:3822880-3822899 | MS.gene96322:intron | 30.0% | |
| TGAACAAGATACCGAAATAA+AGG | + | chr8.3:3824379-3824398 | MS.gene96322:CDS | 30.0% | |
| TGATGTTCAATCAATCTATG+TGG | - | chr8.3:3825602-3825621 | None:intergenic | 30.0% | |
| TGTGAAAAAGGATATCACTT+TGG | + | chr8.3:3821846-3821865 | MS.gene96322:intron | 30.0% | |
| TTAGAATCTTTCTTCTCTTC+GGG | - | chr8.3:3824326-3824345 | None:intergenic | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr8.3:3822494-3822475 | None:intergenic | 30.0% | |
| TTTCAATTACTGCTAATTGC+AGG | + | chr8.3:3823870-3823889 | MS.gene96322:intron | 30.0% | |
| ! | AAAGACGGAAGATAGATTTT+TGG | - | chr8.3:3824886-3824905 | None:intergenic | 30.0% |
| ! | AAGACGGAAGATAGATTTTT+GGG | - | chr8.3:3824885-3824904 | None:intergenic | 30.0% |
| ! | AATCTTGAAAGTGTAGAACA+AGG | - | chr8.3:3823035-3823054 | None:intergenic | 30.0% |
| ! | AATTTAGGATCTGTTTGGAT+TGG | + | chr8.3:3821678-3821697 | MS.gene96322:intron | 30.0% |
| ! | AGAATCTGTTTTACTCAGTT+TGG | - | chr8.3:3822748-3822767 | None:intergenic | 30.0% |
| ! | ATTGTCTAGTGAGTTTTCTA+TGG | + | chr8.3:3826562-3826581 | MS.gene96322:intron | 30.0% |
| ! | ATTTTCAACTTTGGCATCTA+TGG | - | chr8.3:3824186-3824205 | None:intergenic | 30.0% |
| ! | ATTTTCATACTGTGGCATAT+TGG | + | chr8.3:3823315-3823334 | MS.gene96322:intron | 30.0% |
| ! | ATTTTCTATTTTCCTGCGTT+TGG | - | chr8.3:3824417-3824436 | None:intergenic | 30.0% |
| ! | CGACCAATTTCTAAAGAAAA+TGG | + | chr8.3:3824356-3824375 | MS.gene96322:CDS | 30.0% |
| ! | GATTGAATTTAGGATCTGTT+TGG | + | chr8.3:3821673-3821692 | MS.gene96322:intron | 30.0% |
| ! | GGATTTTTCCTCATCATTTT+TGG | - | chr8.3:3823904-3823923 | None:intergenic | 30.0% |
| ! | GTTCTACACTTTCAAGATTT+TGG | + | chr8.3:3823036-3823055 | MS.gene96322:intron | 30.0% |
| ! | TGATATGTTTTCCATGCATT+TGG | + | chr8.3:3826252-3826271 | MS.gene96322:intron | 30.0% |
| ! | TTCAGAGAGAAACTTTTTGA+GGG | - | chr8.3:3821480-3821499 | None:intergenic | 30.0% |
| ! | TTCTTCATCTGCCTTTATTT+CGG | - | chr8.3:3824393-3824412 | None:intergenic | 30.0% |
| !! | AAGTAGAATTTGTTGATGAG+AGG | + | chr8.3:3826191-3826210 | MS.gene96322:CDS | 30.0% |
| !! | CAGCCAAATTTGTTATTGAA+CGG | - | chr8.3:3822886-3822905 | None:intergenic | 30.0% |
| !! | CCTAATTCTAAGCTTTTTCT+GGG | + | chr8.3:3825015-3825034 | MS.gene96322:intron | 30.0% |
| !! | CTTTGAAATCTTGCATAGAA+GGG | - | chr8.3:3824929-3824948 | None:intergenic | 30.0% |
| !! | TCCTAATTCTAAGCTTTTTC+TGG | + | chr8.3:3825014-3825033 | MS.gene96322:intron | 30.0% |
| !! | TCTTTGAAATCTTGCATAGA+AGG | - | chr8.3:3824930-3824949 | None:intergenic | 30.0% |
| !! | TGAATCTGTTGTTGATAATG+TGG | + | chr8.3:3823959-3823978 | MS.gene96322:CDS | 30.0% |
| !!! | GTTCTTTTTCTTTTTGGGTT+TGG | - | chr8.3:3824090-3824109 | None:intergenic | 30.0% |
| AAAGTCTCTTCCTTCTTTCT+TGG | + | chr8.3:3824854-3824873 | MS.gene96322:intron | 35.0% | |
| AATATGAGTGAATCTAAGGG+AGG | + | chr8.3:3824434-3824453 | MS.gene96322:CDS | 35.0% | |
| ACCAATCAGCAAAATCAAAC+GGG | + | chr8.3:3824459-3824478 | MS.gene96322:CDS | 35.0% | |
| AGATAAGTCAACTAGTGAAG+GGG | + | chr8.3:3824250-3824269 | MS.gene96322:CDS | 35.0% | |
| AGTGTACAGTTTACAGGATT+AGG | - | chr8.3:3823099-3823118 | None:intergenic | 35.0% | |
| ATAGCAAGATCATAGGTAGT+GGG | - | chr8.3:3823490-3823509 | None:intergenic | 35.0% | |
| ATGCAGAACGATAATACAGA+GGG | + | chr8.3:3822944-3822963 | MS.gene96322:intron | 35.0% | |
| ATTCACACCTCAAATATTGC+TGG | - | chr8.3:3825747-3825766 | None:intergenic | 35.0% | |
| ATTCTCTCTGAATCTGTACA+TGG | + | chr8.3:3824595-3824614 | MS.gene96322:intron | 35.0% | |
| CCAAGTAAAGAGCAATTGAT+TGG | - | chr8.3:3821436-3821455 | None:intergenic | 35.0% | |
| CCAATCAATTGCTCTTTACT+TGG | + | chr8.3:3821433-3821452 | MS.gene96322:CDS | 35.0% | |
| CCCAGAAAAAGCTTAGAATT+AGG | - | chr8.3:3825018-3825037 | None:intergenic | 35.0% | |
| CGGTTTCAATTTACATGTTG+AGG | - | chr8.3:3825458-3825477 | None:intergenic | 35.0% | |
| CGTTCAATAACAAATTTGGC+TGG | + | chr8.3:3822884-3822903 | MS.gene96322:intron | 35.0% | |
| CTATAAATAGGTCATGCTGT+TGG | + | chr8.3:3826524-3826543 | MS.gene96322:intron | 35.0% | |
| CTTAGTTTCAGTGGTGAAAT+TGG | - | chr8.3:3826085-3826104 | None:intergenic | 35.0% | |
| GACCAATCAGCAAAATCAAA+CGG | + | chr8.3:3824458-3824477 | MS.gene96322:CDS | 35.0% | |
| GATCGATTATGTTCTTGTCA+TGG | + | chr8.3:3824988-3825007 | MS.gene96322:intron | 35.0% | |
| GCAAAAGCAGAAGAAATTCT+TGG | + | chr8.3:3826351-3826370 | MS.gene96322:CDS | 35.0% | |
| GCTGTTTACATGAGCTATTT+CGG | - | chr8.3:3821816-3821835 | None:intergenic | 35.0% | |
| GCTTCAGGATAACTCATATT+GGG | + | chr8.3:3826213-3826232 | MS.gene96322:CDS | 35.0% | |
| GGTCTGAAGAATACAAATGT+AGG | - | chr8.3:3823458-3823477 | None:intergenic | 35.0% | |
| GGTGTAACCAGGATTATAAA+GGG | - | chr8.3:3824792-3824811 | None:intergenic | 35.0% | |
| TAATGTGGAAGACAACCAAT+TGG | + | chr8.3:3823974-3823993 | MS.gene96322:CDS | 35.0% | |
| TATAGCAAGATCATAGGTAG+TGG | - | chr8.3:3823491-3823510 | None:intergenic | 35.0% | |
| TATCGTTCTGCATCAACAAA+AGG | - | chr8.3:3822937-3822956 | None:intergenic | 35.0% | |
| TATGGAATACAGAGGAATTC+TGG | - | chr8.3:3822845-3822864 | None:intergenic | 35.0% | |
| TCACTTTCCATTCATTCGTT+TGG | + | chr8.3:3821517-3821536 | MS.gene96322:intron | 35.0% | |
| TCGTGGCGATTAAATCTTAA+TGG | + | chr8.3:3823842-3823861 | MS.gene96322:intron | 35.0% | |
| TGCGAATGTCATCTAAATTG+AGG | + | chr8.3:3822696-3822715 | MS.gene96322:intron | 35.0% | |
| TGGCGATTAAATCTTAATGG+TGG | + | chr8.3:3823845-3823864 | MS.gene96322:intron | 35.0% | |
| TGTATAAAGTACAGTGTGAC+TGG | + | chr8.3:3823167-3823186 | MS.gene96322:intron | 35.0% | |
| TTATGTGCATACATGGCAAA+AGG | + | chr8.3:3822789-3822808 | MS.gene96322:intron | 35.0% | |
| TTGCTTAACAAAACTTGACG+AGG | - | chr8.3:3821356-3821375 | None:intergenic | 35.0% | |
| TTGTTCAACAGCATGTACAA+CGG | - | chr8.3:3825478-3825497 | None:intergenic | 35.0% | |
| TTTAGATGCACACTTAAACG+CGG | - | chr8.3:3825263-3825282 | None:intergenic | 35.0% | |
| ! | ACAAGAGAGATAGGTTTTCA+AGG | - | chr8.3:3823749-3823768 | None:intergenic | 35.0% |
| ! | AGGGTAATTTTGTCATTCTG+GGG | - | chr8.3:3824813-3824832 | None:intergenic | 35.0% |
| ! | ATCAATGATCAAAAAGCGCA+AGG | + | chr8.3:3823710-3823729 | MS.gene96322:CDS | 35.0% |
| ! | ATCTTGCTATAGCATTTGTG+GGG | + | chr8.3:3823500-3823519 | MS.gene96322:intron | 35.0% |
| ! | ATTTCAAAGTGCCTATCCAT+TGG | - | chr8.3:3824632-3824651 | None:intergenic | 35.0% |
| ! | CTTCAGAGAGAAACTTTTTG+AGG | - | chr8.3:3821481-3821500 | None:intergenic | 35.0% |
| ! | GAAGCATCTCGATTGAATTT+AGG | + | chr8.3:3821663-3821682 | MS.gene96322:intron | 35.0% |
| ! | GAGGGTAATTTTGTCATTCT+GGG | - | chr8.3:3824814-3824833 | None:intergenic | 35.0% |
| ! | GATCTTGCTATAGCATTTGT+GGG | + | chr8.3:3823499-3823518 | MS.gene96322:intron | 35.0% |
| ! | GGAATTCTTTTGATACCTGA+TGG | - | chr8.3:3821314-3821333 | None:intergenic | 35.0% |
| ! | GTGCTACTAACAATTATGAC+TGG | - | chr8.3:3823258-3823277 | None:intergenic | 35.0% |
| ! | TAAGAACAGTTTTGCACTAG+TGG | - | chr8.3:3823134-3823153 | None:intergenic | 35.0% |
| ! | TCTGAAGCTAAAATTGAGGT+GGG | + | chr8.3:3821494-3821513 | MS.gene96322:intron | 35.0% |
| ! | TGATCTTGCTATAGCATTTG+TGG | + | chr8.3:3823498-3823517 | MS.gene96322:intron | 35.0% |
| ! | TGCTTCTTCATTTGTTGCAT+CGG | - | chr8.3:3824300-3824319 | None:intergenic | 35.0% |
| ! | TTGTTTTCTGTAACCACAGT+TGG | - | chr8.3:3824005-3824024 | None:intergenic | 35.0% |
| !! | ACAGATGCCAAAGTTGATAA+TGG | + | chr8.3:3824044-3824063 | MS.gene96322:CDS | 35.0% |
| !! | GAGAAACTTTTTGAGGGTTT+TGG | - | chr8.3:3821474-3821493 | None:intergenic | 35.0% |
| !! | TCTCTCTGAAGCTAAAATTG+AGG | + | chr8.3:3821490-3821509 | MS.gene96322:CDS | 35.0% |
| !! | TTTCAGGTTATTGTGTTTGC+TGG | + | chr8.3:3825853-3825872 | MS.gene96322:intron | 35.0% |
| !! | TTTGTTATTGAACGGTGAGA+AGG | - | chr8.3:3822878-3822897 | None:intergenic | 35.0% |
| AAACTGCTTGGAAGAGCTTA+TGG | + | chr8.3:3821737-3821756 | MS.gene96322:intron | 40.0% | |
| AATAAGCTGAAGGCAGCTTA+TGG | - | chr8.3:3821781-3821800 | None:intergenic | 40.0% | |
| ACAGTGTCCAAACGAATGAA+TGG | - | chr8.3:3821527-3821546 | None:intergenic | 40.0% | |
| AGAAGACCAAGAAGAAACGT+GGG | + | chr8.3:3826812-3826831 | MS.gene96322:CDS | 40.0% | |
| AGAATTTATAGCACAGGCTG+AGG | - | chr8.3:3825806-3825825 | None:intergenic | 40.0% | |
| AGAGATGTGCCGCAAATATT+TGG | + | chr8.3:3822985-3823004 | MS.gene96322:CDS | 40.0% | |
| AGCAATCGAACCATGAAGAA+CGG | + | chr8.3:3821371-3821390 | MS.gene96322:CDS | 40.0% | |
| AGGATCGTTTGATCGTTTGT+GGG | + | chr8.3:3825621-3825640 | MS.gene96322:intron | 40.0% | |
| ATCAATAAGTCCACCCCTAT+AGG | - | chr8.3:3826839-3826858 | None:intergenic | 40.0% | |
| ATGCTGTAAAATAGCAGCCA+TGG | - | chr8.3:3823414-3823433 | None:intergenic | 40.0% | |
| ATTACTGCTAATTGCAGGTG+TGG | + | chr8.3:3823875-3823894 | MS.gene96322:intron | 40.0% | |
| ATTGCAGCAAAAACCAGTGA+AGG | + | chr8.3:3826141-3826160 | MS.gene96322:intron | 40.0% | |
| CTCAGCACCATTATCAACTT+TGG | - | chr8.3:3824054-3824073 | None:intergenic | 40.0% | |
| CTGATATTGAGAACTATGGG+AGG | + | chr8.3:3823544-3823563 | MS.gene96322:intron | 40.0% | |
| CTTGTCAGTGTACAGTTTAC+AGG | - | chr8.3:3823105-3823124 | None:intergenic | 40.0% | |
| GAAATTCTTGGTCAAGTCAG+AGG | + | chr8.3:3826363-3826382 | MS.gene96322:CDS | 40.0% | |
| GATGCAGAACGATAATACAG+AGG | + | chr8.3:3822943-3822962 | MS.gene96322:intron | 40.0% | |
| GCCGCAAATATTTGGAAACA+TGG | + | chr8.3:3822993-3823012 | MS.gene96322:CDS | 40.0% | |
| GGATAACTCATATTGGGCAA+AGG | + | chr8.3:3826219-3826238 | MS.gene96322:CDS | 40.0% | |
| GGCTTCAGGATAACTCATAT+TGG | + | chr8.3:3826212-3826231 | MS.gene96322:CDS | 40.0% | |
| GGGATAAATCTGCTTGAAGA+AGG | - | chr8.3:3824909-3824928 | None:intergenic | 40.0% | |
| GGGTGTAACCAGGATTATAA+AGG | - | chr8.3:3824793-3824812 | None:intergenic | 40.0% | |
| GGTGTAACCAGCAATATTTG+AGG | + | chr8.3:3825737-3825756 | MS.gene96322:intron | 40.0% | |
| TACACATCTGTGAAACTGCT+TGG | + | chr8.3:3821725-3821744 | MS.gene96322:intron | 40.0% | |
| TAGCAGTGAAAAGTAGCAGT+TGG | + | chr8.3:3823282-3823301 | MS.gene96322:intron | 40.0% | |
| TCCAGACAAGAGAGAATGAT+CGG | + | chr8.3:3821915-3821934 | MS.gene96322:intron | 40.0% | |
| TCTGCTTGAAGAAGGAAAGA+CGG | - | chr8.3:3824901-3824920 | None:intergenic | 40.0% | |
| TGTAGAACAAGGCTAAGGTT+GGG | - | chr8.3:3823024-3823043 | None:intergenic | 40.0% | |
| TGTGGACTCCAAAAATGATG+AGG | + | chr8.3:3823893-3823912 | MS.gene96322:CDS | 40.0% | |
| TTCATCTCTCTTCAGTAGCA+AGG | + | chr8.3:3823673-3823692 | MS.gene96322:intron | 40.0% | |
| TTCTCTTGCTTCTTGAATCG+TGG | + | chr8.3:3823825-3823844 | MS.gene96322:intron | 40.0% | |
| TTGGGTGTAACCAAGAAAGA+AGG | - | chr8.3:3824867-3824886 | None:intergenic | 40.0% | |
| ! | ATTTGTTGATGAGAGGCTTC+AGG | + | chr8.3:3826198-3826217 | MS.gene96322:CDS | 40.0% |
| ! | CGAGGGTAATTTTGTCATTC+TGG | - | chr8.3:3824815-3824834 | None:intergenic | 40.0% |
| ! | CTCAGCACCATTTTCAACTT+TGG | - | chr8.3:3824195-3824214 | None:intergenic | 40.0% |
| ! | CTGCTTCTGTTCAGAGTTTT+GGG | - | chr8.3:3821399-3821418 | None:intergenic | 40.0% |
| ! | CTTCTTCATTTGTTGCATCG+GGG | - | chr8.3:3824298-3824317 | None:intergenic | 40.0% |
| ! | GAAAGTGTAGAACAAGGCTA+AGG | - | chr8.3:3823029-3823048 | None:intergenic | 40.0% |
| ! | GCTTCTTCATTTGTTGCATC+GGG | - | chr8.3:3824299-3824318 | None:intergenic | 40.0% |
| ! | TCAGCACCGCAATGAATTTT+GGG | - | chr8.3:3822563-3822582 | None:intergenic | 40.0% |
| ! | TCTGCTTCTGTTCAGAGTTT+TGG | - | chr8.3:3821400-3821419 | None:intergenic | 40.0% |
| ! | TTTTGCACCATAACCACTCT+CGG | - | chr8.3:3826337-3826356 | None:intergenic | 40.0% |
| !! | CTCTGAAGCTAAAATTGAGG+TGG | + | chr8.3:3821493-3821512 | MS.gene96322:intron | 40.0% |
| !! | TTGATACCTGATGGATTTGC+AGG | - | chr8.3:3821305-3821324 | None:intergenic | 40.0% |
| AAGAAACGTGGGACCTATAG+GGG | + | chr8.3:3826823-3826842 | MS.gene96322:CDS | 45.0% | |
| ACCGATCATTCTCTCTTGTC+TGG | - | chr8.3:3821919-3821938 | None:intergenic | 45.0% | |
| ACGAGGAGTGAAAGTGAAGA+GGG | - | chr8.3:3821339-3821358 | None:intergenic | 45.0% | |
| AGAAGAAACGTGGGACCTAT+AGG | + | chr8.3:3826821-3826840 | MS.gene96322:CDS | 45.0% | |
| ATAGGTCCCACGTTTCTTCT+TGG | - | chr8.3:3826821-3826840 | None:intergenic | 45.0% | |
| CAGATGAAGAAACCAAACGC+AGG | + | chr8.3:3824402-3824421 | MS.gene96322:CDS | 45.0% | |
| CAGGATCGTTTGATCGTTTG+TGG | + | chr8.3:3825620-3825639 | MS.gene96322:intron | 45.0% | |
| CATCTCTTCTAGATCCACTG+TGG | - | chr8.3:3822972-3822991 | None:intergenic | 45.0% | |
| CTGTAAAATAGCAGCCATGG+CGG | - | chr8.3:3823411-3823430 | None:intergenic | 45.0% | |
| GAAGAAACGTGGGACCTATA+GGG | + | chr8.3:3826822-3826841 | MS.gene96322:CDS | 45.0% | |
| GACACGGATATGGAATACAG+AGG | - | chr8.3:3822853-3822872 | None:intergenic | 45.0% | |
| GAGAAGACCAAGAAGAAACG+TGG | + | chr8.3:3826811-3826830 | MS.gene96322:CDS | 45.0% | |
| GCCATTGTCTCATGTTGTTG+GGG | + | chr8.3:3823189-3823208 | MS.gene96322:intron | 45.0% | |
| GGCCATTGTCTCATGTTGTT+GGG | + | chr8.3:3823188-3823207 | MS.gene96322:intron | 45.0% | |
| GTGTAGAACAAGGCTAAGGT+TGG | - | chr8.3:3823025-3823044 | None:intergenic | 45.0% | |
| TAATACAGAGGGTTCCACAG+TGG | + | chr8.3:3822955-3822974 | MS.gene96322:CDS | 45.0% | |
| TAGAAAGCAGCAAGAAGAGC+AGG | - | chr8.3:3825969-3825988 | None:intergenic | 45.0% | |
| TCCCCAACAACATGAGACAA+TGG | - | chr8.3:3823193-3823212 | None:intergenic | 45.0% | |
| TGAGAAGGAAGACACGGATA+TGG | - | chr8.3:3822863-3822882 | None:intergenic | 45.0% | |
| TGCTATAGCATTTGTGGGGT+TGG | + | chr8.3:3823504-3823523 | MS.gene96322:intron | 45.0% | |
| TGCTCTTTACTTGGAACGCT+CGG | + | chr8.3:3821442-3821461 | MS.gene96322:CDS | 45.0% | |
| TGGCCATTGTCTCATGTTGT+TGG | + | chr8.3:3823187-3823206 | MS.gene96322:intron | 45.0% | |
| TTCTTGGTCAAGTCAGAGGA+AGG | + | chr8.3:3826367-3826386 | MS.gene96322:CDS | 45.0% | |
| ! | AAACGGGCTTTCTGAGAATG+GGG | + | chr8.3:3824475-3824494 | MS.gene96322:CDS | 45.0% |
| ! | ATGGTGCTGAGACAGAGAAA+CGG | + | chr8.3:3824063-3824082 | MS.gene96322:CDS | 45.0% |
| ! | CAAAATTCATTGCGGTGCTG+AGG | + | chr8.3:3822562-3822581 | MS.gene96322:intron | 45.0% |
| ! | CAAACGGGCTTTCTGAGAAT+GGG | + | chr8.3:3824474-3824493 | MS.gene96322:CDS | 45.0% |
| ! | CTCAGCACCGCAATGAATTT+TGG | - | chr8.3:3822564-3822583 | None:intergenic | 45.0% |
| ! | GTTTCTTCTTGGTCTTCTCG+TGG | - | chr8.3:3826810-3826829 | None:intergenic | 45.0% |
| ! | TCAAACGGGCTTTCTGAGAA+TGG | + | chr8.3:3824473-3824492 | MS.gene96322:CDS | 45.0% |
| !! | ATAGGTAGTGGGATAACTGC+TGG | - | chr8.3:3823479-3823498 | None:intergenic | 45.0% |
| !! | GCCCGTTTGATTTTGCTGAT+TGG | - | chr8.3:3824463-3824482 | None:intergenic | 45.0% |
| !!! | GTTTTGGGTTCCGTTCTTCA+TGG | - | chr8.3:3821384-3821403 | None:intergenic | 45.0% |
| !! | ACAAATTTAAATTAAAAATA+GGG | - | chr8.3:3822178-3822197 | None:intergenic | 5.0% |
| !! | TACAAATTTAAATTAAAAAT+AGG | - | chr8.3:3822179-3822198 | None:intergenic | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+AGG | - | chr8.3:3822251-3822270 | None:intergenic | 5.0% |
| !!! | AAAAAATTTTAAGAAAATTT+GGG | + | chr8.3:3825716-3825735 | MS.gene96322:intron | 5.0% |
| !!! | TAAAAAATTTTAAGAAAATT+TGG | + | chr8.3:3825715-3825734 | MS.gene96322:intron | 5.0% |
| ACTGGGACACACCAAATGCA+TGG | - | chr8.3:3826266-3826285 | None:intergenic | 50.0% | |
| ATCTGTACATGGCATCCTCC+TGG | + | chr8.3:3824606-3824625 | MS.gene96322:intron | 50.0% | |
| CCAATTGGAGTCACCAACTG+TGG | + | chr8.3:3823989-3824008 | MS.gene96322:CDS | 50.0% | |
| CGTTGAAATGCTGCCTTCAC+TGG | - | chr8.3:3826157-3826176 | None:intergenic | 50.0% | |
| GAACGGTGAGAAGGAAGACA+CGG | - | chr8.3:3822869-3822888 | None:intergenic | 50.0% | |
| GACGAGGAGTGAAAGTGAAG+AGG | - | chr8.3:3821340-3821359 | None:intergenic | 50.0% | |
| GCTCTTTACTTGGAACGCTC+GGG | + | chr8.3:3821443-3821462 | MS.gene96322:CDS | 50.0% | |
| GGAGTGAAAGTGAAGAGGGT+TGG | - | chr8.3:3821335-3821354 | None:intergenic | 50.0% | |
| GGGGATGCAAAAGAGCAGAT+TGG | + | chr8.3:3824269-3824288 | MS.gene96322:CDS | 50.0% | |
| GTATGGGTCTATCTCTCTGC+AGG | + | chr8.3:3826305-3826324 | MS.gene96322:intron | 50.0% | |
| TTCACTACGTCATTCCGCCA+TGG | + | chr8.3:3823394-3823413 | MS.gene96322:intron | 50.0% | |
| ! | AAAGTGCCTATCCATTGGCC+AGG | - | chr8.3:3824627-3824646 | None:intergenic | 50.0% |
| ! | ATGGTGCTGAGACAGAGAAG+AGG | + | chr8.3:3824204-3824223 | MS.gene96322:CDS | 50.0% |
| !! | CCACAGTTGGTGACTCCAAT+TGG | - | chr8.3:3823992-3824011 | None:intergenic | 50.0% |
| !! | TGTCATTCTGGGGTGTAACC+AGG | - | chr8.3:3824803-3824822 | None:intergenic | 50.0% |
| AAACGTGGGACCTATAGGGG+TGG | + | chr8.3:3826826-3826845 | MS.gene96322:CDS | 55.0% | |
| CATCCTCCTGGCCAATGGAT+AGG | + | chr8.3:3824618-3824637 | MS.gene96322:intron | 55.0% | |
| GGGTCTATCTCTCTGCAGGA+TGG | + | chr8.3:3826309-3826328 | MS.gene96322:intron | 55.0% | |
| CATGGCATCCTCCTGGCCAA+TGG | + | chr8.3:3824613-3824632 | MS.gene96322:intron | 60.0% | |
| GTGCCTATCCATTGGCCAGG+AGG | - | chr8.3:3824624-3824643 | None:intergenic | 60.0% | |
| ! | GATGGCGCCGAGAGTGGTTA+TGG | + | chr8.3:3826327-3826346 | MS.gene96322:CDS | 60.0% |
| ! | CTGCAGGATGGCGCCGAGAG+TGG | + | chr8.3:3826321-3826340 | MS.gene96322:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 3821299 | 3826903 | 3821299 | ID=MS.gene96322 |
| chr8.3 | mRNA | 3821299 | 3826903 | 3821299 | ID=MS.gene96322.t1;Parent=MS.gene96322 |
| chr8.3 | exon | 3821299 | 3821511 | 3821299 | ID=MS.gene96322.t1.exon1;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3821299 | 3821511 | 3821299 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3822950 | 3823014 | 3822950 | ID=MS.gene96322.t1.exon2;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3822950 | 3823014 | 3822950 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3823688 | 3823731 | 3823688 | ID=MS.gene96322.t1.exon3;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3823688 | 3823731 | 3823688 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3823892 | 3824553 | 3823892 | ID=MS.gene96322.t1.exon4;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3823892 | 3824553 | 3823892 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3826148 | 3826240 | 3826148 | ID=MS.gene96322.t1.exon5;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3826148 | 3826240 | 3826148 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3826327 | 3826388 | 3826327 | ID=MS.gene96322.t1.exon6;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3826327 | 3826388 | 3826327 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| chr8.3 | exon | 3826798 | 3826903 | 3826798 | ID=MS.gene96322.t1.exon7;Parent=MS.gene96322.t1 |
| chr8.3 | CDS | 3826798 | 3826903 | 3826798 | ID=cds.MS.gene96322.t1;Parent=MS.gene96322.t1 |
| Gene Sequence |
| Protein sequence |
