Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380011701.01.T01 | XP_024634050.2 | 92.228 | 193 | 14 | 1 | 1 | 193 | 63 | 254 | 3.76E-122 | 367 |
| MsG0380011701.01.T01 | XP_024634050.2 | 91.525 | 59 | 5 | 0 | 208 | 266 | 433 | 491 | 2.92E-27 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380011701.01.T01 | I3SC45 | 92.228 | 193 | 14 | 1 | 1 | 193 | 63 | 254 | 1.80e-122 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048134.01 | MsG0380011701.01 | 0.816214 | 6.205683e-52 | 4.370576e-49 |
| MsG0080048347.01 | MsG0380011701.01 | 0.803243 | 3.824849e-49 | 1.912468e-46 |
| MsG0180000029.01 | MsG0380011701.01 | 0.837314 | 5.592140e-57 | 7.236008e-54 |
| MsG0180000367.01 | MsG0380011701.01 | 0.813086 | 3.058093e-51 | 1.977922e-48 |
| MsG0180000399.01 | MsG0380011701.01 | 0.809459 | 1.872334e-50 | 1.099917e-47 |
| MsG0180000497.01 | MsG0380011701.01 | 0.825391 | 4.808863e-54 | 4.377215e-51 |
| MsG0180000738.01 | MsG0380011701.01 | 0.808243 | 3.408537e-50 | 1.939039e-47 |
| MsG0180000897.01 | MsG0380011701.01 | 0.806734 | 7.122278e-50 | 3.895266e-47 |
| MsG0180000899.01 | MsG0380011701.01 | 0.810674 | 1.025005e-50 | 6.217785e-48 |
| MsG0180000929.01 | MsG0380011701.01 | 0.832522 | 9.010011e-56 | 1.009553e-52 |
| MsG0180001029.01 | MsG0380011701.01 | 0.811137 | 8.139050e-51 | 4.998270e-48 |
| MsG0180001503.01 | MsG0380011701.01 | 0.823353 | 1.450161e-53 | 1.245531e-50 |
| MsG0180001513.01 | MsG0380011701.01 | 0.846434 | 2.177544e-59 | 3.747874e-56 |
| MsG0180001515.01 | MsG0380011701.01 | 0.848560 | 5.671548e-60 | 1.044921e-56 |
| MsG0180001533.01 | MsG0380011701.01 | 0.845719 | 3.406843e-59 | 5.729872e-56 |
| MsG0180001797.01 | MsG0380011701.01 | 0.811788 | 5.876536e-51 | 3.671316e-48 |
| MsG0180002935.01 | MsG0380011701.01 | 0.828847 | 7.158390e-55 | 7.199634e-52 |
| MsG0180003235.01 | MsG0380011701.01 | 0.832784 | 7.755847e-56 | 8.758891e-53 |
| MsG0180003249.01 | MsG0380011701.01 | 0.820229 | 7.657609e-53 | 6.024052e-50 |
| MsG0180003250.01 | MsG0380011701.01 | 0.808792 | 2.602450e-50 | 1.501794e-47 |
| MsG0180003320.01 | MsG0380011701.01 | 0.831805 | 1.355577e-55 | 1.487311e-52 |
| MsG0180003372.01 | MsG0380011701.01 | 0.808222 | 3.443979e-50 | 1.958063e-47 |
| MsG0180003375.01 | MsG0380011701.01 | 0.818211 | 2.206310e-52 | 1.641153e-49 |
| MsG0180003484.01 | MsG0380011701.01 | 0.824839 | 6.492646e-54 | 5.818078e-51 |
| MsG0180003504.01 | MsG0380011701.01 | 0.818451 | 1.947129e-52 | 1.458186e-49 |
| MsG0180004232.01 | MsG0380011701.01 | 0.807141 | 5.843189e-50 | 3.229446e-47 |
| MsG0180004359.01 | MsG0380011701.01 | 0.803867 | 2.839432e-49 | 1.442808e-46 |
| MsG0180004549.01 | MsG0380011701.01 | 0.806128 | 9.560200e-50 | 5.148252e-47 |
| MsG0180004942.01 | MsG0380011701.01 | 0.801440 | 8.993462e-49 | 4.295246e-46 |
| MsG0180005648.01 | MsG0380011701.01 | 0.805174 | 1.516330e-49 | 7.968071e-47 |
| MsG0280006442.01 | MsG0380011701.01 | 0.836633 | 8.347063e-57 | 1.057982e-53 |
| MsG0280010802.01 | MsG0380011701.01 | 0.816964 | 4.215257e-52 | 3.030437e-49 |
| MsG0280010936.01 | MsG0380011701.01 | 0.826676 | 2.379928e-54 | 2.247161e-51 |
| MsG0280011236.01 | MsG0380011701.01 | 0.806257 | 8.981478e-50 | 4.852645e-47 |
| MsG0280011238.01 | MsG0380011701.01 | 0.801230 | 9.932137e-49 | 4.718394e-46 |
| MsG0280011269.01 | MsG0380011701.01 | 0.803046 | 4.201551e-49 | 2.090200e-46 |
| MsG0380011635.01 | MsG0380011701.01 | 0.854132 | 1.509131e-61 | 3.337233e-58 |
| MsG0380011636.01 | MsG0380011701.01 | 0.811342 | 7.344194e-51 | 4.534353e-48 |
| MsG0380011686.01 | MsG0380011701.01 | 0.815870 | 7.408122e-52 | 5.168120e-49 |
| MsG0380011701.01 | MsG0380011968.01 | 0.804568 | 2.029530e-49 | 1.049934e-46 |
| MsG0380011701.01 | MsG0380011974.01 | 0.834117 | 3.607536e-56 | 4.240157e-53 |
| MsG0380011701.01 | MsG0380012254.01 | 0.824201 | 9.176640e-54 | 8.073523e-51 |
| MsG0380011701.01 | MsG0380012889.01 | 0.826773 | 2.257296e-54 | 2.137162e-51 |
| MsG0380011701.01 | MsG0380015130.01 | 0.830818 | 2.370171e-55 | 2.525248e-52 |
| MsG0380011701.01 | MsG0380015323.01 | 0.806757 | 7.043488e-50 | 3.854305e-47 |
| MsG0380011701.01 | MsG0380015572.01 | 0.808353 | 3.229626e-50 | 1.842582e-47 |
| MsG0380011701.01 | MsG0380015659.01 | 0.802753 | 4.830580e-49 | 2.385398e-46 |
| MsG0380011701.01 | MsG0380015660.01 | 0.829378 | 5.322813e-55 | 5.438748e-52 |
| MsG0380011701.01 | MsG0380016045.01 | 0.847511 | 1.104052e-59 | 1.967014e-56 |
| MsG0380011701.01 | MsG0380016299.01 | 0.809934 | 1.480293e-50 | 8.806121e-48 |
| MsG0380011701.01 | MsG0380017151.01 | 0.818340 | 2.062528e-52 | 1.539812e-49 |
| MsG0380011701.01 | MsG0380017168.01 | 0.801063 | 1.074380e-48 | 5.082789e-46 |
| MsG0380011701.01 | MsG0380017694.01 | 0.803570 | 3.272964e-49 | 1.650449e-46 |
| MsG0380011701.01 | MsG0380017901.01 | 0.827720 | 1.338575e-54 | 1.302906e-51 |
| MsG0380011701.01 | MsG0480018406.01 | 0.821447 | 4.017531e-53 | 3.269295e-50 |
| MsG0380011701.01 | MsG0480018440.01 | 0.817248 | 3.639092e-52 | 2.636365e-49 |
| MsG0380011701.01 | MsG0480018521.01 | 0.812581 | 3.945868e-51 | 2.518327e-48 |
| MsG0380011701.01 | MsG0480019146.01 | 0.838378 | 2.980335e-57 | 3.984507e-54 |
| MsG0380011701.01 | MsG0480019346.01 | 0.811681 | 6.198679e-51 | 3.861451e-48 |
| MsG0380011701.01 | MsG0480019348.01 | 0.821901 | 3.154766e-53 | 2.600478e-50 |
| MsG0380011701.01 | MsG0480019666.01 | 0.804321 | 2.284977e-49 | 1.174593e-46 |
| MsG0380011701.01 | MsG0480019817.01 | 0.810170 | 1.316855e-50 | 7.882076e-48 |
| MsG0380011701.01 | MsG0480019842.01 | 0.809177 | 2.152348e-50 | 1.254951e-47 |
| MsG0380011701.01 | MsG0480020810.01 | 0.819740 | 9.908845e-53 | 7.689855e-50 |
| MsG0380011701.01 | MsG0480020904.01 | 0.809866 | 1.531300e-50 | 9.093182e-48 |
| MsG0380011701.01 | MsG0480021133.01 | 0.840325 | 9.305408e-58 | 1.320793e-54 |
| MsG0380011701.01 | MsG0480021230.01 | 0.821984 | 3.018773e-53 | 2.494069e-50 |
| MsG0380011701.01 | MsG0480022309.01 | 0.840831 | 6.860950e-58 | 9.893189e-55 |
| MsG0380011701.01 | MsG0480022311.01 | 0.824817 | 6.573555e-54 | 5.886880e-51 |
| MsG0380011701.01 | MsG0480022428.01 | 0.812690 | 3.734313e-51 | 2.390218e-48 |
| MsG0380011701.01 | MsG0480022833.01 | 0.853911 | 1.747444e-61 | 3.835470e-58 |
| MsG0380011701.01 | MsG0480023102.01 | 0.804967 | 1.675543e-49 | 8.758105e-47 |
| MsG0380011701.01 | MsG0480023432.01 | 0.819700 | 1.012191e-52 | 7.846211e-50 |
| MsG0380011701.01 | MsG0580024087.01 | 0.807812 | 4.209322e-50 | 2.367474e-47 |
| MsG0380011701.01 | MsG0580024202.01 | 0.820909 | 5.346251e-53 | 4.286092e-50 |
| MsG0380011701.01 | MsG0580024207.01 | 0.803446 | 3.473068e-49 | 1.745642e-46 |
| MsG0380011701.01 | MsG0580024217.01 | 0.810828 | 9.494982e-51 | 5.783409e-48 |
| MsG0380011701.01 | MsG0580024218.01 | 0.809137 | 2.194828e-50 | 1.278402e-47 |
| MsG0380011701.01 | MsG0580024219.01 | 0.815924 | 7.204251e-52 | 5.033316e-49 |
| MsG0380011701.01 | MsG0580024408.01 | 0.800984 | 1.114883e-48 | 5.264097e-46 |
| MsG0380011701.01 | MsG0580024464.01 | 0.816076 | 6.664475e-52 | 4.675962e-49 |
| MsG0380011701.01 | MsG0580024986.01 | 0.812782 | 3.565720e-51 | 2.287631e-48 |
| MsG0380011701.01 | MsG0580024990.01 | 0.821240 | 4.485275e-53 | 3.628992e-50 |
| MsG0380011701.01 | MsG0580025023.01 | 0.807235 | 5.581452e-50 | 3.092416e-47 |
| MsG0380011701.01 | MsG0580025432.01 | 0.814977 | 1.170241e-51 | 7.967222e-49 |
| MsG0380011701.01 | MsG0580025965.01 | 0.803091 | 4.113908e-49 | 2.048850e-46 |
| MsG0380011701.01 | MsG0580026492.01 | 0.813070 | 3.082255e-51 | 1.992721e-48 |
| MsG0380011701.01 | MsG0580026521.01 | 0.823806 | 1.136122e-53 | 9.885307e-51 |
| MsG0380011701.01 | MsG0580027337.01 | 0.810984 | 8.782216e-51 | 5.372202e-48 |
| MsG0380011701.01 | MsG0580027638.01 | 0.828433 | 9.013151e-55 | 8.957868e-52 |
| MsG0380011701.01 | MsG0580027751.01 | 0.832601 | 8.615478e-56 | 9.676354e-53 |
| MsG0380011701.01 | MsG0580027752.01 | 0.807952 | 3.931513e-50 | 2.219286e-47 |
| MsG0380011701.01 | MsG0580027753.01 | 0.834961 | 2.214579e-56 | 2.669761e-53 |
| MsG0380011701.01 | MsG0580028490.01 | 0.820239 | 7.617541e-53 | 5.994155e-50 |
| MsG0380011701.01 | MsG0580029240.01 | 0.818248 | 2.164009e-52 | 1.611306e-49 |
| MsG0380011701.01 | MsG0580029296.01 | 0.823759 | 1.164956e-53 | 1.012339e-50 |
| MsG0380011701.01 | MsG0580029518.01 | 0.818058 | 2.389670e-52 | 1.770074e-49 |
| MsG0380011701.01 | MsG0580029937.01 | 0.819664 | 1.031621e-52 | 7.988668e-50 |
| MsG0380011701.01 | MsG0580030135.01 | 0.803349 | 3.636991e-49 | 1.823417e-46 |
| MsG0380011701.01 | MsG0580030145.01 | 0.802187 | 6.320059e-49 | 3.076013e-46 |
| MsG0380011701.01 | MsG0680030613.01 | 0.827049 | 1.938869e-54 | 1.850596e-51 |
| MsG0380011701.01 | MsG0680031009.01 | 0.828349 | 9.443388e-55 | 9.361940e-52 |
| MsG0380011701.01 | MsG0680031200.01 | 0.803852 | 2.859913e-49 | 1.452605e-46 |
| MsG0380011701.01 | MsG0680032461.01 | 0.807068 | 6.055428e-50 | 3.340425e-47 |
| MsG0380011701.01 | MsG0680033755.01 | 0.820576 | 6.378181e-53 | 5.065801e-50 |
| MsG0380011701.01 | MsG0680034316.01 | 0.800641 | 1.309987e-48 | 6.131260e-46 |
| MsG0380011701.01 | MsG0680034354.01 | 0.803552 | 3.301975e-49 | 1.664250e-46 |
| MsG0380011701.01 | MsG0680034978.01 | 0.801704 | 7.942513e-49 | 3.818500e-46 |
| MsG0380011701.01 | MsG0780036208.01 | 0.801291 | 9.648388e-49 | 4.590762e-46 |
| MsG0380011701.01 | MsG0780036649.01 | 0.808832 | 2.551970e-50 | 1.474204e-47 |
| MsG0380011701.01 | MsG0780036839.01 | 0.827562 | 1.460603e-54 | 1.415099e-51 |
| MsG0380011701.01 | MsG0780036960.01 | 0.804940 | 1.697030e-49 | 8.864626e-47 |
| MsG0380011701.01 | MsG0780038307.01 | 0.834960 | 2.215755e-56 | 2.671117e-53 |
| MsG0380011701.01 | MsG0780038519.01 | 0.834925 | 2.261074e-56 | 2.722790e-53 |
| MsG0380011701.01 | MsG0780038657.01 | 0.800028 | 1.746303e-48 | 8.047012e-46 |
| MsG0380011701.01 | MsG0780038922.01 | 0.810734 | 9.947570e-51 | 6.044000e-48 |
| MsG0380011701.01 | MsG0780038963.01 | 0.815461 | 9.136722e-52 | 6.303585e-49 |
| MsG0380011701.01 | MsG0780039373.01 | 0.837990 | 3.751107e-57 | 4.956609e-54 |
| MsG0380011701.01 | MsG0780039576.01 | 0.809182 | 2.147418e-50 | 1.252243e-47 |
| MsG0380011701.01 | MsG0780039883.01 | 0.822052 | 2.910690e-53 | 2.409426e-50 |
| MsG0380011701.01 | MsG0780039925.01 | 0.810332 | 1.215181e-50 | 7.304242e-48 |
| MsG0380011701.01 | MsG0780040776.01 | 0.803283 | 3.754022e-49 | 1.878903e-46 |
| MsG0380011701.01 | MsG0780040805.01 | 0.819985 | 8.711964e-53 | 6.807577e-50 |
| MsG0380011701.01 | MsG0780040806.01 | 0.801093 | 1.059481e-48 | 5.016224e-46 |
| MsG0380011701.01 | MsG0780040977.01 | 0.811169 | 8.008448e-51 | 4.922099e-48 |
| MsG0380011701.01 | MsG0780040991.01 | 0.815863 | 7.434747e-52 | 5.185806e-49 |
| MsG0380011701.01 | MsG0780041246.01 | 0.803550 | 3.304028e-49 | 1.665240e-46 |
| MsG0380011701.01 | MsG0780041248.01 | 0.832166 | 1.103800e-55 | 1.223743e-52 |
| MsG0380011701.01 | MsG0780041447.01 | 0.822168 | 2.737204e-53 | 2.273326e-50 |
| MsG0380011701.01 | MsG0880041977.01 | 0.823178 | 1.593011e-53 | 1.361610e-50 |
| MsG0380011701.01 | MsG0880041978.01 | 0.812496 | 4.117230e-51 | 2.621887e-48 |
| MsG0380011701.01 | MsG0880042261.01 | 0.810698 | 1.012709e-50 | 6.147211e-48 |
| MsG0380011701.01 | MsG0880042262.01 | 0.800423 | 1.451066e-48 | 6.754314e-46 |
| MsG0380011701.01 | MsG0880042740.01 | 0.800611 | 1.329072e-48 | 6.215685e-46 |
| MsG0380011701.01 | MsG0880043017.01 | 0.804549 | 2.047647e-49 | 1.058778e-46 |
| MsG0380011701.01 | MsG0880043217.01 | 0.804910 | 1.722007e-49 | 8.988384e-47 |
| MsG0380011701.01 | MsG0880043481.01 | 0.806999 | 6.262959e-50 | 3.448701e-47 |
| MsG0380011701.01 | MsG0880043998.01 | 0.802968 | 4.361909e-49 | 2.165633e-46 |
| MsG0380011701.01 | MsG0880044026.01 | 0.802706 | 4.938819e-49 | 2.435934e-46 |
| MsG0380011701.01 | MsG0880044712.01 | 0.806562 | 7.744472e-50 | 4.216839e-47 |
| MsG0380011701.01 | MsG0880046092.01 | 0.802133 | 6.482573e-49 | 3.150909e-46 |
| MsG0380011701.01 | MsG0880046158.01 | 0.808035 | 3.775062e-50 | 2.135648e-47 |
| MsG0380011701.01 | MsG0880046429.01 | 0.811825 | 5.767547e-51 | 3.606799e-48 |
| MsG0380011701.01 | MsG0880047383.01 | 0.817359 | 3.435230e-52 | 2.496295e-49 |
| MsG0380011701.01 | MsG0880047664.01 | 0.802570 | 5.269167e-49 | 2.589724e-46 |
| MsG0380011701.01 | MsG0880047697.01 | 0.800517 | 1.388917e-48 | 6.480096e-46 |
| MsG0380011701.01 | MsG0880047714.01 | 0.834067 | 3.713014e-56 | 4.357404e-53 |
| MsG0280007216.01 | MsG0380011701.01 | 0.800757 | 1.240605e-48 | 5.823403e-46 |
| MsG0280007602.01 | MsG0380011701.01 | 0.812818 | 3.501181e-51 | 2.248294e-48 |
| MsG0280007911.01 | MsG0380011701.01 | 0.804634 | 1.966528e-49 | 1.019045e-46 |
| MsG0280009167.01 | MsG0380011701.01 | 0.804606 | 1.992597e-49 | 1.031842e-46 |
| MsG0280009432.01 | MsG0380011701.01 | 0.806152 | 9.447908e-50 | 5.090927e-47 |
| MsG0280009657.01 | MsG0380011701.01 | 0.846173 | 2.565343e-59 | 4.377408e-56 |
| MsG0280010410.01 | MsG0380011701.01 | 0.831638 | 1.490501e-55 | 1.627106e-52 |
| MsG0280010539.01 | MsG0380011701.01 | 0.810334 | 1.213829e-50 | 7.296544e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380011701.01.T01 | MTR_3g009010 | 91.710 | 193 | 15 | 1 | 1 | 193 | 134 | 325 | 1.45e-124 | 366 |
| MsG0380011701.01.T01 | MTR_3g009010 | 91.525 | 59 | 5 | 0 | 208 | 266 | 504 | 562 | 4.13e-31 | 121 |
| MsG0380011701.01.T01 | MTR_3g009020 | 84.456 | 193 | 29 | 1 | 2 | 193 | 44 | 236 | 1.80e-116 | 343 |
| MsG0380011701.01.T01 | MTR_3g009020 | 77.966 | 59 | 13 | 0 | 208 | 266 | 415 | 473 | 1.20e-25 | 105 |
| MsG0380011701.01.T01 | MTR_3g008960 | 84.456 | 193 | 27 | 1 | 1 | 193 | 63 | 252 | 4.01e-113 | 334 |
| MsG0380011701.01.T01 | MTR_3g008960 | 89.831 | 59 | 6 | 0 | 208 | 266 | 431 | 489 | 2.50e-31 | 121 |
| MsG0380011701.01.T01 | MTR_3g009030 | 74.359 | 195 | 47 | 3 | 1 | 193 | 67 | 260 | 1.92e-97 | 294 |
| MsG0380011701.01.T01 | MTR_3g009030 | 81.356 | 59 | 11 | 0 | 208 | 266 | 439 | 497 | 1.07e-27 | 111 |
| MsG0380011701.01.T01 | MTR_8g091310 | 60.606 | 198 | 73 | 3 | 1 | 193 | 71 | 268 | 6.41e-83 | 257 |
| MsG0380011701.01.T01 | MTR_8g091310 | 54.237 | 59 | 27 | 0 | 208 | 266 | 448 | 506 | 4.08e-18 | 84.0 |
| MsG0380011701.01.T01 | MTR_5g062290 | 55.789 | 190 | 78 | 3 | 6 | 193 | 77 | 262 | 1.27e-72 | 231 |
| MsG0380011701.01.T01 | MTR_5g062290 | 54.237 | 59 | 27 | 0 | 208 | 266 | 447 | 505 | 2.40e-18 | 84.7 |
| MsG0380011701.01.T01 | MTR_5g062190 | 57.895 | 190 | 74 | 3 | 6 | 193 | 79 | 264 | 2.88e-72 | 230 |
| MsG0380011701.01.T01 | MTR_5g062190 | 50.847 | 59 | 29 | 0 | 208 | 266 | 449 | 507 | 3.39e-17 | 81.3 |
| MsG0380011701.01.T01 | MTR_3g086750 | 49.744 | 195 | 90 | 6 | 2 | 193 | 73 | 262 | 9.31e-55 | 185 |
| MsG0380011701.01.T01 | MTR_3g086750 | 44.068 | 59 | 33 | 0 | 208 | 266 | 447 | 505 | 6.74e-13 | 68.6 |
| MsG0380011701.01.T01 | MTR_5g061980 | 58.427 | 89 | 35 | 2 | 99 | 185 | 87 | 175 | 2.59e-30 | 116 |
| MsG0380011701.01.T01 | MTR_4g035760 | 50.847 | 59 | 29 | 0 | 208 | 266 | 121 | 179 | 1.42e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTGGTTGGGAAACATTT+AGG | 0.131349 | 3:-3757880 | MsG0380011701.01.T01:CDS |
| ACATATCTTTGCGCTGAAAA+TGG | 0.170576 | 3:-3757938 | MsG0380011701.01.T01:CDS |
| TTATAATCTGAAATGTTTCT+TGG | 0.244588 | 3:+3757632 | None:intergenic |
| TTCAGATTCATGTCACAAAA+TGG | 0.258732 | 3:-3756830 | MsG0380011701.01.T01:CDS |
| AAGAAACATTTCAGATTATA+AGG | 0.276821 | 3:-3757630 | MsG0380011701.01.T01:CDS |
| ATGATTATTCTGACATTTGT+AGG | 0.292742 | 3:+3754767 | None:intergenic |
| TTCTGGTTGGGAAACATTTA+GGG | 0.295890 | 3:-3757879 | MsG0380011701.01.T01:intron |
| CTCAAGTGGTTGATCGAAAA+TGG | 0.301104 | 3:-3754738 | MsG0380011701.01.T01:CDS |
| CAGATTATGAGGGCACAAAT+TGG | 0.303729 | 3:-3757079 | MsG0380011701.01.T01:CDS |
| TTTGTGCTTGGGCATATCTT+TGG | 0.317830 | 3:+3754832 | None:intergenic |
| AACAAAGGGCTTAGGTGGTT+TGG | 0.348057 | 3:+3756761 | None:intergenic |
| CATATCTTTGCGCTGAAAAT+GGG | 0.349908 | 3:-3757937 | MsG0380011701.01.T01:CDS |
| AACCACCTAAGCCCTTTGTT+GGG | 0.376973 | 3:-3756758 | MsG0380011701.01.T01:CDS |
| GTTGAACACCCTAAAATTGA+AGG | 0.385361 | 3:+3757726 | None:intergenic |
| GCCGACCGTAGTTCACCTTC+TGG | 0.397256 | 3:-3757896 | MsG0380011701.01.T01:CDS |
| ATCAGTGACTGCAGATTATG+AGG | 0.405023 | 3:-3757090 | MsG0380011701.01.T01:CDS |
| GTGTATTCTCATGCAACATT+TGG | 0.419146 | 3:-3754804 | MsG0380011701.01.T01:CDS |
| TGGCTCATTTGCAGCTTTGG+AGG | 0.420703 | 3:-3757762 | MsG0380011701.01.T01:intron |
| AAACCACCTAAGCCCTTTGT+TGG | 0.425060 | 3:-3756759 | MsG0380011701.01.T01:CDS |
| CCGTAGTTCACCTTCTGGTT+GGG | 0.427471 | 3:-3757891 | MsG0380011701.01.T01:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.431118 | 3:-3756999 | MsG0380011701.01.T01:CDS |
| AAGATATGCCCAAGCACAAA+TGG | 0.440605 | 3:-3754829 | MsG0380011701.01.T01:CDS |
| CGCCATAACCATTAGTAAGT+TGG | 0.454539 | 3:+3756997 | None:intergenic |
| ACCGTAGTTCACCTTCTGGT+TGG | 0.463053 | 3:-3757892 | MsG0380011701.01.T01:CDS |
| TTTCAGCGCAAAGATATGTC+TGG | 0.466042 | 3:+3757942 | None:intergenic |
| GGCTCATTTGCAGCTTTGGA+GGG | 0.466108 | 3:-3757761 | MsG0380011701.01.T01:intron |
| ATACACATCCATTTGTGCTT+GGG | 0.467668 | 3:+3754821 | None:intergenic |
| TGAAATGTTTCTTGGTTGCT+AGG | 0.468956 | 3:+3757640 | None:intergenic |
| ACAAATGTCAGAATAATCAT+TGG | 0.470733 | 3:-3754764 | MsG0380011701.01.T01:CDS |
| TAGGGGAATGGACGGTTGAA+TGG | 0.472771 | 3:-3754884 | MsG0380011701.01.T01:CDS |
| AGATTATGAGGGCACAAATT+GGG | 0.477446 | 3:-3757078 | MsG0380011701.01.T01:CDS |
| TTTGTGGGGTTAAATAATAT+AGG | 0.482260 | 3:-3757697 | MsG0380011701.01.T01:CDS |
| TGAGCTATCCACCATCCAAC+AGG | 0.483400 | 3:+3756788 | None:intergenic |
| AATACACATCCATTTGTGCT+TGG | 0.485189 | 3:+3754820 | None:intergenic |
| TTCTCATGCAACATTTGGAT+GGG | 0.487793 | 3:-3754799 | MsG0380011701.01.T01:CDS |
| GGAGAATACCAACTTACTAA+TGG | 0.490578 | 3:-3757005 | MsG0380011701.01.T01:CDS |
| ATTCGAATCAAAGCATCAAA+TGG | 0.491455 | 3:-3757586 | MsG0380011701.01.T01:CDS |
| GTTGCTAGGTGAATCTGAAA+AGG | 0.499593 | 3:+3757654 | None:intergenic |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3:-3756722 | MsG0380011701.01.T01:CDS |
| ATTCTCATGCAACATTTGGA+TGG | 0.518902 | 3:-3754800 | MsG0380011701.01.T01:CDS |
| ACCACCTAAGCCCTTTGTTG+GGG | 0.527560 | 3:-3756757 | MsG0380011701.01.T01:CDS |
| ACGGTTGAATGGAGCATACA+AGG | 0.549974 | 3:-3754873 | MsG0380011701.01.T01:CDS |
| TTTCTTACCCTCATGACTTG+AGG | 0.552403 | 3:+3756966 | None:intergenic |
| ATATCTTTGCGCTGAAAATG+GGG | 0.554384 | 3:-3757936 | MsG0380011701.01.T01:CDS |
| CAGTTATGTATGAATTCCAA+TGG | 0.561323 | 3:+3756861 | None:intergenic |
| GTGGGGTTAAATAATATAGG+AGG | 0.575488 | 3:-3757694 | MsG0380011701.01.T01:CDS |
| GGGTTAAATAATATAGGAGG+AGG | 0.582810 | 3:-3757691 | MsG0380011701.01.T01:CDS |
| ACTATTGTAAACACATTACA+AGG | 0.585005 | 3:-3757026 | MsG0380011701.01.T01:CDS |
| ACCAGAAGGTGAACTACGGT+CGG | 0.604107 | 3:+3757895 | None:intergenic |
| ATAGAGCTCCTCAAGTCATG+AGG | 0.611152 | 3:-3756974 | MsG0380011701.01.T01:CDS |
| CAGTGAGGATACCTGTTGGA+TGG | 0.625186 | 3:-3756799 | MsG0380011701.01.T01:CDS |
| CCCAACCAGAAGGTGAACTA+CGG | 0.625802 | 3:+3757891 | None:intergenic |
| CTAAATGTTTCCCAACCAGA+AGG | 0.632163 | 3:+3757881 | None:intergenic |
| CCACCTAAGCCCTTTGTTGG+GGG | 0.632438 | 3:-3756756 | MsG0380011701.01.T01:CDS |
| ATAATCATTGGAGTCTCAAG+TGG | 0.635772 | 3:-3754752 | MsG0380011701.01.T01:CDS |
| TGAGGATACCTGTTGGATGG+TGG | 0.641335 | 3:-3756796 | MsG0380011701.01.T01:CDS |
| TCAGTGACTGCAGATTATGA+GGG | 0.647319 | 3:-3757089 | MsG0380011701.01.T01:CDS |
| TAGAGCTCCTCAAGTCATGA+GGG | 0.665978 | 3:-3756973 | MsG0380011701.01.T01:intron |
| TATCTTTGCGCTGAAAATGG+GGG | 0.665981 | 3:-3757935 | MsG0380011701.01.T01:CDS |
| GATGCAGTGAGGATACCTGT+TGG | 0.680380 | 3:-3756803 | MsG0380011701.01.T01:CDS |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3:-3756721 | MsG0380011701.01.T01:CDS |
| AAAATGGATTAGATGCAGTG+AGG | 0.737558 | 3:-3756814 | MsG0380011701.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATTATTATTATTATT+AGG | - | Chr3:3756100-3756119 | MsG0380011701.01.T01:intron | 0.0% |
| !! | TTATATTATTATTATTATTA+GGG | - | Chr3:3756101-3756120 | MsG0380011701.01.T01:intron | 0.0% |
| !! | AATCATAAATTTATAAAGAA+AGG | + | Chr3:3756883-3756902 | None:intergenic | 10.0% |
| !! | ATAAATTATAGTAACATTAA+TGG | - | Chr3:3756289-3756308 | MsG0380011701.01.T01:intron | 10.0% |
| !! | TTAAGAGATATTATATATTT+AGG | - | Chr3:3757740-3757759 | MsG0380011701.01.T01:CDS | 10.0% |
| !!! | ATTACATGATTTTATTAAAA+TGG | + | Chr3:3755167-3755186 | None:intergenic | 10.0% |
| !! | AAAAGTTAACTTCTAATTAT+TGG | - | Chr3:3754896-3754915 | MsG0380011701.01.T01:intron | 15.0% |
| !! | ATATAGTAATAGAAAAGTTT+AGG | - | Chr3:3757045-3757064 | MsG0380011701.01.T01:CDS | 15.0% |
| !! | CCAAAAAATTATCAAAATAA+TGG | - | Chr3:3756905-3756924 | MsG0380011701.01.T01:intron | 15.0% |
| !! | GATTTAAATTCAAAGTTATA+AGG | - | Chr3:3756339-3756358 | MsG0380011701.01.T01:intron | 15.0% |
| !! | TATATATACTCAAAGTTATA+AGG | - | Chr3:3756379-3756398 | MsG0380011701.01.T01:intron | 15.0% |
| !!! | ATAATTTTAAAATGACATGA+CGG | - | Chr3:3756731-3756750 | MsG0380011701.01.T01:CDS | 15.0% |
| !!! | ATGATTTTACTTTTCTATTT+TGG | - | Chr3:3757771-3757790 | MsG0380011701.01.T01:intron | 15.0% |
| !!! | CAATTTTTTTTTACTGTTTA+TGG | + | Chr3:3756666-3756685 | None:intergenic | 15.0% |
| !!! | CCATTATTTTGATAATTTTT+TGG | + | Chr3:3756908-3756927 | None:intergenic | 15.0% |
| !! | AAGAAACATTTCAGATTATA+AGG | - | Chr3:3755048-3755067 | MsG0380011701.01.T01:intron | 20.0% |
| !! | AGATATGTAAAGTAATATAG+AGG | + | Chr3:3756946-3756965 | None:intergenic | 20.0% |
| !! | ATAATTGAATGTTGAACTAA+AGG | + | Chr3:3756042-3756061 | None:intergenic | 20.0% |
| !! | GTAACTTGATTTAAAAGAAT+TGG | + | Chr3:3755228-3755247 | None:intergenic | 20.0% |
| !! | TAATTGAATGTTGAACTAAA+GGG | + | Chr3:3756041-3756060 | None:intergenic | 20.0% |
| !!! | TTAAATAAAATTGGGTTAGA+GGG | - | Chr3:3756258-3756277 | MsG0380011701.01.T01:intron | 20.0% |
| !!! | TTATAATCTGAAATGTTTCT+TGG | + | Chr3:3755049-3755068 | None:intergenic | 20.0% |
| !!! | TTTAAATAAAATTGGGTTAG+AGG | - | Chr3:3756257-3756276 | MsG0380011701.01.T01:intron | 20.0% |
| !!! | TTTACTTTTCTATTTTGGTA+GGG | - | Chr3:3757776-3757795 | MsG0380011701.01.T01:intron | 20.0% |
| !!! | TTTTACTTTTCTATTTTGGT+AGG | - | Chr3:3757775-3757794 | MsG0380011701.01.T01:intron | 20.0% |
| !!! | TTTTTGTGAACTAAGTTTTA+AGG | + | Chr3:3756970-3756989 | None:intergenic | 20.0% |
| ! | AAGAAAGGTAAATGTTGATA+CGG | + | Chr3:3756868-3756887 | None:intergenic | 25.0% |
| ! | AATAATGAACTTGCAAGATT+TGG | - | Chr3:3755756-3755775 | MsG0380011701.01.T01:intron | 25.0% |
| ! | ACAAATGTCAGAATAATCAT+TGG | - | Chr3:3757914-3757933 | MsG0380011701.01.T01:CDS | 25.0% |
| ! | ACATGATCACATAAGTATTT+GGG | + | Chr3:3757164-3757183 | None:intergenic | 25.0% |
| ! | ACTATTGTAAACACATTACA+AGG | - | Chr3:3755652-3755671 | MsG0380011701.01.T01:intron | 25.0% |
| ! | ATATATAGACCAACTAACAT+TGG | + | Chr3:3757409-3757428 | None:intergenic | 25.0% |
| ! | ATGATTATTCTGACATTTGT+AGG | + | Chr3:3757914-3757933 | None:intergenic | 25.0% |
| ! | GAAATGAATTCTACATAAAG+TGG | - | Chr3:3755346-3755365 | MsG0380011701.01.T01:intron | 25.0% |
| ! | GTGTTCAACAAAAAATTTGT+GGG | - | Chr3:3754966-3754985 | MsG0380011701.01.T01:intron | 25.0% |
| ! | TAGTAATAGAAAAGTTTAGG+AGG | - | Chr3:3757048-3757067 | MsG0380011701.01.T01:CDS | 25.0% |
| ! | TCAAAGTTATAAGGTTAAAC+TGG | - | Chr3:3756348-3756367 | MsG0380011701.01.T01:intron | 25.0% |
| ! | TGTTCAACAAAAAATTTGTG+GGG | - | Chr3:3754967-3754986 | MsG0380011701.01.T01:intron | 25.0% |
| ! | TTTGTGGGGTTAAATAATAT+AGG | - | Chr3:3754981-3755000 | MsG0380011701.01.T01:intron | 25.0% |
| !! | AGACTTTGAAAAAATGACAT+TGG | - | Chr3:3755264-3755283 | MsG0380011701.01.T01:intron | 25.0% |
| !! | ATATATTTGTAACTTGCAGT+AGG | - | Chr3:3756445-3756464 | MsG0380011701.01.T01:intron | 25.0% |
| !! | GCATTACTACAATATGTTTT+GGG | - | Chr3:3757256-3757275 | MsG0380011701.01.T01:intron | 25.0% |
| !! | TGCATTACTACAATATGTTT+TGG | - | Chr3:3757255-3757274 | MsG0380011701.01.T01:intron | 25.0% |
| !!! | GTAATCACATTTTTGTTTAG+TGG | + | Chr3:3756416-3756435 | None:intergenic | 25.0% |
| !!! | TTACTTTTCTATTTTGGTAG+GGG | - | Chr3:3757777-3757796 | MsG0380011701.01.T01:intron | 25.0% |
| AAGAGATGGATATACAGAAT+GGG | - | Chr3:3756539-3756558 | MsG0380011701.01.T01:intron | 30.0% | |
| AATCTTGTCTTGATTACACT+TGG | - | Chr3:3754850-3754869 | MsG0380011701.01.T01:CDS | 30.0% | |
| ACTTTGAATTTAAATCCGCT+TGG | + | Chr3:3756335-3756354 | None:intergenic | 30.0% | |
| ATAGTCATGTGAAAAACTGA+TGG | + | Chr3:3755637-3755656 | None:intergenic | 30.0% | |
| ATTGAACCTTCACACATATA+TGG | + | Chr3:3755561-3755580 | None:intergenic | 30.0% | |
| CAGTTATGTATGAATTCCAA+TGG | + | Chr3:3755820-3755839 | None:intergenic | 30.0% | |
| GACATGATCACATAAGTATT+TGG | + | Chr3:3757165-3757184 | None:intergenic | 30.0% | |
| GGGTAAGTAATGTAATATCT+AGG | - | Chr3:3754819-3754838 | MsG0380011701.01.T01:CDS | 30.0% | |
| GGTGTTCAACAAAAAATTTG+TGG | - | Chr3:3754965-3754984 | MsG0380011701.01.T01:intron | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | Chr3:3755679-3755698 | MsG0380011701.01.T01:intron | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | Chr3:3757250-3757269 | None:intergenic | 30.0% | |
| TCATAGAGTTCTTAGCAAAA+AGG | - | Chr3:3756592-3756611 | MsG0380011701.01.T01:intron | 30.0% | |
| TTACTAAAATAGTCACCAAG+CGG | - | Chr3:3756317-3756336 | MsG0380011701.01.T01:intron | 30.0% | |
| TTCAGATTCATGTCACAAAA+TGG | - | Chr3:3755848-3755867 | MsG0380011701.01.T01:intron | 30.0% | |
| ! | AAGAATTGGTCTCTTAAGAT+TGG | + | Chr3:3755214-3755233 | None:intergenic | 30.0% |
| ! | ATTCGAATCAAAGCATCAAA+TGG | - | Chr3:3755092-3755111 | MsG0380011701.01.T01:intron | 30.0% |
| ! | GAGCGTTTCTAACATTTTTA+CGG | - | Chr3:3755454-3755473 | MsG0380011701.01.T01:intron | 30.0% |
| ! | TAAAGAAATCAGTTTCGAGT+AGG | + | Chr3:3757001-3757020 | None:intergenic | 30.0% |
| ! | TCTAATACTCGCACTTTTAT+CGG | + | Chr3:3755393-3755412 | None:intergenic | 30.0% |
| ! | TCTCTATCTCTTTGTAGTTT+TGG | - | Chr3:3756839-3756858 | MsG0380011701.01.T01:CDS | 30.0% |
| ! | TGACTCATCCTTCAATTTTA+GGG | - | Chr3:3754944-3754963 | MsG0380011701.01.T01:intron | 30.0% |
| !! | ATGCTTTGATTCGAATTTTG+AGG | + | Chr3:3755088-3755107 | None:intergenic | 30.0% |
| !! | GGTTTAAATTGATTAGCTTG+AGG | + | Chr3:3755146-3755165 | None:intergenic | 30.0% |
| !! | TAAATTGATTAGCTTGAGGA+TGG | + | Chr3:3755142-3755161 | None:intergenic | 30.0% |
| !! | TGCTTTGATTCGAATTTTGA+GGG | + | Chr3:3755087-3755106 | None:intergenic | 30.0% |
| !!! | ATCAAATGGTCTATTTTTGC+AGG | - | Chr3:3755106-3755125 | MsG0380011701.01.T01:intron | 30.0% |
| !!! | ATGTTTTGGGACAAATTCAA+TGG | - | Chr3:3757269-3757288 | MsG0380011701.01.T01:intron | 30.0% |
| !!! | ATTTTAAAATGACATGACGG+AGG | - | Chr3:3756734-3756753 | MsG0380011701.01.T01:CDS | 30.0% |
| !!! | TCAAATGCTCTTAGTTTTGT+AGG | - | Chr3:3757364-3757383 | MsG0380011701.01.T01:intron | 30.0% |
| !!! | TTGAACTTTGTTTTCTTTGC+AGG | - | Chr3:3755793-3755812 | MsG0380011701.01.T01:intron | 30.0% |
| !!! | TTTTAAAATGACATGACGGA+GGG | - | Chr3:3756735-3756754 | MsG0380011701.01.T01:CDS | 30.0% |
| AAATCCTTGCCAATGTTAGT+TGG | - | Chr3:3757397-3757416 | MsG0380011701.01.T01:intron | 35.0% | |
| AATACACATCCATTTGTGCT+TGG | + | Chr3:3757861-3757880 | None:intergenic | 35.0% | |
| ACATATCTTTGCGCTGAAAA+TGG | - | Chr3:3754740-3754759 | MsG0380011701.01.T01:CDS | 35.0% | |
| ACTTCTTCTCTCATTTGTCA+AGG | - | Chr3:3757209-3757228 | MsG0380011701.01.T01:intron | 35.0% | |
| ACTTGACAATGCTTTCACAT+GGG | - | Chr3:3755957-3755976 | MsG0380011701.01.T01:intron | 35.0% | |
| AGAGATGGATATACAGAATG+GGG | - | Chr3:3756540-3756559 | MsG0380011701.01.T01:intron | 35.0% | |
| ATAATCATTGGAGTCTCAAG+TGG | - | Chr3:3757926-3757945 | MsG0380011701.01.T01:CDS | 35.0% | |
| ATACACATCCATTTGTGCTT+GGG | + | Chr3:3757860-3757879 | None:intergenic | 35.0% | |
| ATATCTTTGCGCTGAAAATG+GGG | - | Chr3:3754742-3754761 | MsG0380011701.01.T01:CDS | 35.0% | |
| ATTCTCATGCAACATTTGGA+TGG | - | Chr3:3757878-3757897 | MsG0380011701.01.T01:intron | 35.0% | |
| CAAGAGATGGATATACAGAA+TGG | - | Chr3:3756538-3756557 | MsG0380011701.01.T01:intron | 35.0% | |
| CATATCTTTGCGCTGAAAAT+GGG | - | Chr3:3754741-3754760 | MsG0380011701.01.T01:CDS | 35.0% | |
| CTATCTTGATTGACACTTAG+TGG | + | Chr3:3757093-3757112 | None:intergenic | 35.0% | |
| CTTATTCATTGTGACTCATG+CGG | - | Chr3:3755310-3755329 | MsG0380011701.01.T01:intron | 35.0% | |
| CTTCTTCTCTCATTTGTCAA+GGG | - | Chr3:3757210-3757229 | MsG0380011701.01.T01:intron | 35.0% | |
| GGAGAATACCAACTTACTAA+TGG | - | Chr3:3755673-3755692 | MsG0380011701.01.T01:intron | 35.0% | |
| GGGTTAAATAATATAGGAGG+AGG | - | Chr3:3754987-3755006 | MsG0380011701.01.T01:intron | 35.0% | |
| GTGGGGTTAAATAATATAGG+AGG | - | Chr3:3754984-3755003 | MsG0380011701.01.T01:intron | 35.0% | |
| GTGTATTCTCATGCAACATT+TGG | - | Chr3:3757874-3757893 | MsG0380011701.01.T01:intron | 35.0% | |
| GTTGAACACCCTAAAATTGA+AGG | + | Chr3:3754955-3754974 | None:intergenic | 35.0% | |
| TACATAAGAAATGACAGAGC+CGG | - | Chr3:3757317-3757336 | MsG0380011701.01.T01:intron | 35.0% | |
| TAGCCTCAAGAACTATTACA+AGG | - | Chr3:3757110-3757129 | MsG0380011701.01.T01:intron | 35.0% | |
| TGAAATGTTTCTTGGTTGCT+AGG | + | Chr3:3755041-3755060 | None:intergenic | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | Chr3:3757173-3757192 | MsG0380011701.01.T01:intron | 35.0% | |
| TTATTCATTGTGACTCATGC+GGG | - | Chr3:3755311-3755330 | MsG0380011701.01.T01:intron | 35.0% | |
| TTCTCATGCAACATTTGGAT+GGG | - | Chr3:3757879-3757898 | MsG0380011701.01.T01:intron | 35.0% | |
| ! | AGATTATGAGGGCACAAATT+GGG | - | Chr3:3755600-3755619 | MsG0380011701.01.T01:intron | 35.0% |
| ! | GAGAAGAAGTTTAGAATCTG+TGG | + | Chr3:3757199-3757218 | None:intergenic | 35.0% |
| ! | GTGACTCATCCTTCAATTTT+AGG | - | Chr3:3754943-3754962 | MsG0380011701.01.T01:intron | 35.0% |
| ! | TTCTGGTTGGGAAACATTTA+GGG | - | Chr3:3754799-3754818 | MsG0380011701.01.T01:CDS | 35.0% |
| !! | AAAATGGATTAGATGCAGTG+AGG | - | Chr3:3755864-3755883 | MsG0380011701.01.T01:intron | 35.0% |
| !! | GCTTTGATTCGAATTTTGAG+GGG | + | Chr3:3755086-3755105 | None:intergenic | 35.0% |
| !!! | CAAAATGGTTTTGAGCATAG+TGG | - | Chr3:3756513-3756532 | MsG0380011701.01.T01:intron | 35.0% |
| !!! | TTTCTATTTTGGTAGGGGAA+TGG | - | Chr3:3757782-3757801 | MsG0380011701.01.T01:intron | 35.0% |
| AAGATATGCCCAAGCACAAA+TGG | - | Chr3:3757849-3757868 | MsG0380011701.01.T01:intron | 40.0% | |
| ACATAAGAAATGACAGAGCC+GGG | - | Chr3:3757318-3757337 | MsG0380011701.01.T01:intron | 40.0% | |
| AGAAAAACCACTAAGATCCC+CGG | + | Chr3:3757339-3757358 | None:intergenic | 40.0% | |
| ATCAGTGACTGCAGATTATG+AGG | - | Chr3:3755588-3755607 | MsG0380011701.01.T01:intron | 40.0% | |
| CACTTGACAATGCTTTCACA+TGG | - | Chr3:3755956-3755975 | MsG0380011701.01.T01:intron | 40.0% | |
| CCTTCACACATATATGGTCA+AGG | + | Chr3:3755555-3755574 | None:intergenic | 40.0% | |
| CCTTGACCATATATGTGTGA+AGG | - | Chr3:3755552-3755571 | MsG0380011701.01.T01:intron | 40.0% | |
| CGCCATAACCATTAGTAAGT+TGG | + | Chr3:3755684-3755703 | None:intergenic | 40.0% | |
| CTAAATGTTTCCCAACCAGA+AGG | + | Chr3:3754800-3754819 | None:intergenic | 40.0% | |
| CTCAAGTGGTTGATCGAAAA+TGG | - | Chr3:3757940-3757959 | MsG0380011701.01.T01:CDS | 40.0% | |
| CTGCCTTGTAATAGTTCTTG+AGG | + | Chr3:3757116-3757135 | None:intergenic | 40.0% | |
| GCAGTTGAAGGTTCTCAAAA+TGG | - | Chr3:3756498-3756517 | MsG0380011701.01.T01:intron | 40.0% | |
| GTTGCTAGGTGAATCTGAAA+AGG | + | Chr3:3755027-3755046 | None:intergenic | 40.0% | |
| TAGACCAACTAACATTGGCA+AGG | + | Chr3:3757404-3757423 | None:intergenic | 40.0% | |
| TATCTTTGCGCTGAAAATGG+GGG | - | Chr3:3754743-3754762 | MsG0380011701.01.T01:CDS | 40.0% | |
| TCAGTGACTGCAGATTATGA+GGG | - | Chr3:3755589-3755608 | MsG0380011701.01.T01:intron | 40.0% | |
| TTTCAGCGCAAAGATATGTC+TGG | + | Chr3:3754739-3754758 | None:intergenic | 40.0% | |
| TTTCTTACCCTCATGACTTG+AGG | + | Chr3:3755715-3755734 | None:intergenic | 40.0% | |
| TTTGTGCTTGGGCATATCTT+TGG | + | Chr3:3757849-3757868 | None:intergenic | 40.0% | |
| ! | AGTTTAGAATCTGTGGCCAA+TGG | + | Chr3:3757192-3757211 | None:intergenic | 40.0% |
| ! | CAGATTATGAGGGCACAAAT+TGG | - | Chr3:3755599-3755618 | MsG0380011701.01.T01:intron | 40.0% |
| ! | CTTCTGGTTGGGAAACATTT+AGG | - | Chr3:3754798-3754817 | MsG0380011701.01.T01:CDS | 40.0% |
| ! | TGTTTTCTTTGCAGGACCAT+TGG | - | Chr3:3755801-3755820 | MsG0380011701.01.T01:intron | 40.0% |
| ! | TTGTAACTTGCAGTAGGCAT+GGG | - | Chr3:3756451-3756470 | MsG0380011701.01.T01:intron | 40.0% |
| ! | TTTGTAACTTGCAGTAGGCA+TGG | - | Chr3:3756450-3756469 | MsG0380011701.01.T01:intron | 40.0% |
| !! | CAACATTTGGATGGGCTTTT+TGG | - | Chr3:3757887-3757906 | MsG0380011701.01.T01:CDS | 40.0% |
| !! | GATTAGCTTGAGGATGGATA+AGG | + | Chr3:3755136-3755155 | None:intergenic | 40.0% |
| !! | TATTGGCTCATTTGCAGCTT+TGG | - | Chr3:3754913-3754932 | MsG0380011701.01.T01:intron | 40.0% |
| !!! | TATTTTGGTAGGGGAATGGA+CGG | - | Chr3:3757786-3757805 | MsG0380011701.01.T01:intron | 40.0% |
| AAACCACCTAAGCCCTTTGT+TGG | - | Chr3:3755919-3755938 | MsG0380011701.01.T01:intron | 45.0% | |
| AACAAAGGGCTTAGGTGGTT+TGG | + | Chr3:3755920-3755939 | None:intergenic | 45.0% | |
| AACCACCTAAGCCCTTTGTT+GGG | - | Chr3:3755920-3755939 | MsG0380011701.01.T01:intron | 45.0% | |
| ACGGTTGAATGGAGCATACA+AGG | - | Chr3:3757805-3757824 | MsG0380011701.01.T01:intron | 45.0% | |
| AGGCAGCTTATGATGTTGTG+AGG | - | Chr3:3757130-3757149 | MsG0380011701.01.T01:intron | 45.0% | |
| ATAGAGCTCCTCAAGTCATG+AGG | - | Chr3:3755704-3755723 | MsG0380011701.01.T01:intron | 45.0% | |
| CATAAGAAATGACAGAGCCG+GGG | - | Chr3:3757319-3757338 | MsG0380011701.01.T01:intron | 45.0% | |
| CGCTCTCTTTCTAATACTCG+CGG | + | Chr3:3755439-3755458 | None:intergenic | 45.0% | |
| GCATGGGATGAAAGTGATTG+TGG | - | Chr3:3756467-3756486 | MsG0380011701.01.T01:intron | 45.0% | |
| TAGAGCTCCTCAAGTCATGA+GGG | - | Chr3:3755705-3755724 | MsG0380011701.01.T01:intron | 45.0% | |
| TCTATGACAGAGACTGTCTG+TGG | + | Chr3:3756579-3756598 | None:intergenic | 45.0% | |
| ! | GAGCATAGTGGAACAAGAGA+TGG | - | Chr3:3756525-3756544 | MsG0380011701.01.T01:intron | 45.0% |
| !! | AATAAATAGTAAAAAATTAT+TGG | - | Chr3:3756690-3756709 | MsG0380011701.01.T01:intron | 5.0% |
| !!! | TAAAAGTTTTAAATAAAATT+GGG | - | Chr3:3756250-3756269 | MsG0380011701.01.T01:intron | 5.0% |
| !!! | TTAAAAGTTTTAAATAAAAT+TGG | - | Chr3:3756249-3756268 | MsG0380011701.01.T01:intron | 5.0% |
| ACCACCTAAGCCCTTTGTTG+GGG | - | Chr3:3755921-3755940 | MsG0380011701.01.T01:intron | 50.0% | |
| ACCAGAAGGTGAACTACGGT+CGG | + | Chr3:3754786-3754805 | None:intergenic | 50.0% | |
| ACCGTAGTTCACCTTCTGGT+TGG | - | Chr3:3754786-3754805 | MsG0380011701.01.T01:CDS | 50.0% | |
| CAGTGAGGATACCTGTTGGA+TGG | - | Chr3:3755879-3755898 | MsG0380011701.01.T01:intron | 50.0% | |
| CCCAACCAGAAGGTGAACTA+CGG | + | Chr3:3754790-3754809 | None:intergenic | 50.0% | |
| GATGCAGTGAGGATACCTGT+TGG | - | Chr3:3755875-3755894 | MsG0380011701.01.T01:intron | 50.0% | |
| GTGGACTTGCATGCAGTTGA+AGG | - | Chr3:3756486-3756505 | MsG0380011701.01.T01:intron | 50.0% | |
| TAGGGGAATGGACGGTTGAA+TGG | - | Chr3:3757794-3757813 | MsG0380011701.01.T01:intron | 50.0% | |
| TGAGCTATCCACCATCCAAC+AGG | + | Chr3:3755893-3755912 | None:intergenic | 50.0% | |
| TGAGGATACCTGTTGGATGG+TGG | - | Chr3:3755882-3755901 | MsG0380011701.01.T01:intron | 50.0% | |
| ! | CCGTAGTTCACCTTCTGGTT+GGG | - | Chr3:3754787-3754806 | MsG0380011701.01.T01:CDS | 50.0% |
| ! | TGGCTCATTTGCAGCTTTGG+AGG | - | Chr3:3754916-3754935 | MsG0380011701.01.T01:intron | 50.0% |
| !! | GGCTCATTTGCAGCTTTGGA+GGG | - | Chr3:3754917-3754936 | MsG0380011701.01.T01:intron | 50.0% |
| CCACCTAAGCCCTTTGTTGG+GGG | - | Chr3:3755922-3755941 | MsG0380011701.01.T01:intron | 55.0% | |
| CTTTGCGCTGAAAATGGGGG+AGG | - | Chr3:3754746-3754765 | MsG0380011701.01.T01:CDS | 55.0% | |
| GCCAAAGCTCCCCCAACAAA+GGG | + | Chr3:3755934-3755953 | None:intergenic | 55.0% | |
| TGCCAAAGCTCCCCCAACAA+AGG | + | Chr3:3755935-3755954 | None:intergenic | 55.0% | |
| CCCCCAACAAAGGGCTTAGG+TGG | + | Chr3:3755925-3755944 | None:intergenic | 60.0% | |
| GACAGAGCCGGGGATCTTAG+TGG | - | Chr3:3757329-3757348 | MsG0380011701.01.T01:intron | 60.0% | |
| GCCCTTTGTTGGGGGAGCTT+TGG | - | Chr3:3755930-3755949 | MsG0380011701.01.T01:intron | 60.0% | |
| GCCGACCGTAGTTCACCTTC+TGG | - | Chr3:3754782-3754801 | MsG0380011701.01.T01:CDS | 60.0% | |
| GCTCCCCCAACAAAGGGCTT+AGG | + | Chr3:3755928-3755947 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 3754722 | 3757978 | 3754722 | ID=MsG0380011701.01;Name=MsG0380011701.01 |
| Chr3 | mRNA | 3754722 | 3757978 | 3754722 | ID=MsG0380011701.01.T01;Parent=MsG0380011701.01;Name=MsG0380011701.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|0.5|0.8|5|0|266 |
| Chr3 | exon | 3757880 | 3757978 | 3757880 | ID=MsG0380011701.01.T01:exon:1916;Parent=MsG0380011701.01.T01 |
| Chr3 | exon | 3757573 | 3757770 | 3757573 | ID=MsG0380011701.01.T01:exon:1915;Parent=MsG0380011701.01.T01 |
| Chr3 | exon | 3756974 | 3757126 | 3756974 | ID=MsG0380011701.01.T01:exon:1914;Parent=MsG0380011701.01.T01 |
| Chr3 | exon | 3756717 | 3756885 | 3756717 | ID=MsG0380011701.01.T01:exon:1913;Parent=MsG0380011701.01.T01 |
| Chr3 | exon | 3754722 | 3754903 | 3754722 | ID=MsG0380011701.01.T01:exon:1912;Parent=MsG0380011701.01.T01 |
| Chr3 | CDS | 3757880 | 3757978 | 3757880 | ID=MsG0380011701.01.T01:cds;Parent=MsG0380011701.01.T01 |
| Chr3 | CDS | 3757573 | 3757770 | 3757573 | ID=MsG0380011701.01.T01:cds;Parent=MsG0380011701.01.T01 |
| Chr3 | CDS | 3756974 | 3757126 | 3756974 | ID=MsG0380011701.01.T01:cds;Parent=MsG0380011701.01.T01 |
| Chr3 | CDS | 3756717 | 3756885 | 3756717 | ID=MsG0380011701.01.T01:cds;Parent=MsG0380011701.01.T01 |
| Chr3 | CDS | 3754722 | 3754903 | 3754722 | ID=MsG0380011701.01.T01:cds;Parent=MsG0380011701.01.T01 |
| Gene Sequence |
| Protein sequence |
