AlfalfaGEDB | MsG0780039373.01

M. sativa cultivar ZhongmuNo.1 / MsG0780039373.01

KEGG: -
GO: -
PFAM: PF04525

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780039373.01.T01	KEH23251.1	91.892	37	3	0	1	37	119	155	6.08E-15	78.6

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780039373.01.T01	Q9LZX1	72.973	37	10	0	1	37	125	161	1.14E-11	63.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780039373.01.T01	A0A4P1RVA6	94.595	37	2	0	1	37	110	146	3.02e-15	79.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048134.01	MsG0780039373.01	0.834936	2.245787e-56	2.705235e-53
MsG0080048506.01	MsG0780039373.01	0.809309	2.016646e-50	1.179951e-47
MsG0080048745.01	MsG0780039373.01	0.800855	1.184741e-48	5.575372e-46
MsG0180000029.01	MsG0780039373.01	0.835615	1.513973e-56	1.861161e-53
MsG0180001029.01	MsG0780039373.01	0.848718	5.128321e-60	9.497559e-57
MsG0180001503.01	MsG0780039373.01	0.800469	1.420325e-48	6.618429e-46
MsG0180001515.01	MsG0780039373.01	0.820788	5.699469e-53	4.553650e-50
MsG0180002238.01	MsG0780039373.01	0.834079	3.687930e-56	4.329423e-53
MsG0180003320.01	MsG0780039373.01	0.867115	1.735889e-65	5.990624e-62
MsG0180003505.01	MsG0780039373.01	0.806195	9.255309e-50	4.992639e-47
MsG0180004232.01	MsG0780039373.01	0.810254	1.263021e-50	7.576509e-48
MsG0180004359.01	MsG0780039373.01	0.808955	2.402025e-50	1.392149e-47
MsG0180004549.01	MsG0780039373.01	0.821399	4.122098e-53	3.349916e-50
MsG0180004626.01	MsG0780039373.01	0.811076	8.389520e-51	5.143806e-48
MsG0180005571.01	MsG0780039373.01	0.804321	2.284573e-49	1.174398e-46
MsG0180005906.01	MsG0780039373.01	0.809879	1.521017e-50	9.035327e-48
MsG0180006195.01	MsG0780039373.01	0.821092	4.853018e-53	3.910519e-50
MsG0280010936.01	MsG0780039373.01	0.817843	2.672398e-52	1.967943e-49
MsG0280011128.01	MsG0780039373.01	0.808834	2.548648e-50	1.472390e-47
MsG0280011292.01	MsG0780039373.01	0.821302	4.340706e-53	3.518026e-50
MsG0380011635.01	MsG0780039373.01	0.801971	6.998621e-49	3.387553e-46
MsG0380011701.01	MsG0780039373.01	0.837990	3.751107e-57	4.956609e-54
MsG0380013263.01	MsG0780039373.01	0.802976	4.344815e-49	2.157572e-46
MsG0680031200.01	MsG0780039373.01	0.832222	1.069224e-55	1.187396e-52
MsG0680031684.01	MsG0780039373.01	0.803816	2.909714e-49	1.476520e-46
MsG0680032191.01	MsG0780039373.01	-0.800401	1.466682e-48	6.822862e-46
MsG0680032932.01	MsG0780039373.01	0.856522	3.038742e-62	7.274421e-59
MsG0680034238.01	MsG0780039373.01	0.850307	1.847599e-60	3.603774e-57
MsG0680034354.01	MsG0780039373.01	0.800817	1.206236e-48	5.670674e-46
MsG0680034391.01	MsG0780039373.01	0.801396	9.186099e-49	4.382144e-46
MsG0680034418.01	MsG0780039373.01	0.803465	3.441835e-49	1.730783e-46
MsG0680034974.01	MsG0780039373.01	0.826042	3.369770e-54	3.124838e-51
MsG0480019146.01	MsG0780039373.01	0.852790	3.662625e-61	7.742320e-58
MsG0480019346.01	MsG0780039373.01	0.800947	1.134492e-48	5.351440e-46
MsG0480019348.01	MsG0780039373.01	0.832573	8.754249e-56	9.824081e-53
MsG0480019817.01	MsG0780039373.01	0.813898	2.027356e-51	1.340586e-48
MsG0480019842.01	MsG0780039373.01	0.818739	1.674593e-52	1.263955e-49
MsG0480020810.01	MsG0780039373.01	0.811140	8.123417e-51	4.989120e-48
MsG0480020904.01	MsG0780039373.01	0.828706	7.746949e-55	7.760174e-52
MsG0480021091.01	MsG0780039373.01	0.817150	3.827439e-52	2.765489e-49
MsG0480021133.01	MsG0780039373.01	0.832929	7.140658e-56	8.098846e-53
MsG0480021227.01	MsG0780039373.01	0.803872	2.832738e-49	1.439565e-46
MsG0480021230.01	MsG0780039373.01	0.828595	8.237068e-55	8.224746e-52
MsG0480022055.01	MsG0780039373.01	0.818879	1.556435e-52	1.179375e-49
MsG0480022311.01	MsG0780039373.01	0.809431	1.898410e-50	1.114429e-47
MsG0480023432.01	MsG0780039373.01	0.845221	4.649941e-59	7.695200e-56
MsG0580024087.01	MsG0780039373.01	0.845035	5.219245e-59	8.586696e-56
MsG0580025432.01	MsG0780039373.01	0.810156	1.326068e-50	7.934378e-48
MsG0580025960.01	MsG0780039373.01	0.813682	2.262000e-51	1.486989e-48
MsG0380015659.01	MsG0780039373.01	0.846022	2.819274e-59	4.788150e-56
MsG0380015660.01	MsG0780039373.01	0.827925	1.194988e-54	1.170100e-51
MsG0380016299.01	MsG0780039373.01	0.829457	5.092762e-55	5.215248e-52
MsG0380016300.01	MsG0780039373.01	0.808637	2.809095e-50	1.614429e-47
MsG0380016490.01	MsG0780039373.01	0.818160	2.266225e-52	1.683359e-49
MsG0380017168.01	MsG0780039373.01	0.831733	1.411889e-55	1.545815e-52
MsG0380017901.01	MsG0780039373.01	0.858817	6.349302e-63	1.641459e-59
MsG0580026521.01	MsG0780039373.01	0.850892	1.265608e-60	2.516217e-57
MsG0580027751.01	MsG0780039373.01	0.866478	2.769637e-65	9.347913e-62
MsG0580027752.01	MsG0780039373.01	0.841850	3.700568e-58	5.507872e-55
MsG0580027753.01	MsG0780039373.01	0.817581	3.062431e-52	2.238925e-49
MsG0580029240.01	MsG0780039373.01	0.813912	2.013169e-51	1.331641e-48
MsG0580029676.01	MsG0780039373.01	0.807386	5.184145e-50	2.883607e-47
MsG0580029937.01	MsG0780039373.01	0.837011	6.685419e-57	8.571769e-54
MsG0580029938.01	MsG0780039373.01	0.811162	8.034752e-51	4.937440e-48
MsG0680030613.01	MsG0780039373.01	0.819122	1.370410e-52	1.045369e-49
MsG0280006546.01	MsG0780039373.01	0.827055	1.932786e-54	1.845067e-51
MsG0280006560.01	MsG0780039373.01	0.814733	1.325876e-51	8.967550e-49
MsG0280009232.01	MsG0780039373.01	0.804833	1.786656e-49	9.306962e-47
MsG0280009432.01	MsG0780039373.01	0.803746	3.009087e-49	1.524152e-46
MsG0280010270.01	MsG0780039373.01	0.809206	2.121388e-50	1.237918e-47
MsG0280010539.01	MsG0780039373.01	0.818723	1.688909e-52	1.274178e-49
MsG0780035930.01	MsG0780039373.01	0.805632	1.215553e-49	6.463150e-47
MsG0780036199.01	MsG0780039373.01	0.807312	5.374207e-50	2.983697e-47
MsG0780036472.01	MsG0780039373.01	0.820813	5.624396e-53	4.496947e-50
MsG0780036649.01	MsG0780039373.01	0.826690	2.362332e-54	2.231341e-51
MsG0780036835.01	MsG0780039373.01	0.805191	1.503799e-49	7.905538e-47
MsG0780036839.01	MsG0780039373.01	0.843268	1.555913e-58	2.421439e-55
MsG0780038313.01	MsG0780039373.01	0.818531	1.866817e-52	1.401018e-49
MsG0780038519.01	MsG0780039373.01	0.802546	5.329826e-49	2.617980e-46
MsG0780038657.01	MsG0780039373.01	0.861215	1.200094e-63	3.369861e-60
MsG0780039373.01	MsG0780039883.01	0.812953	3.269787e-51	2.107304e-48
MsG0780039373.01	MsG0780039979.01	0.801931	7.132321e-49	3.448903e-46
MsG0780039373.01	MsG0780040497.01	0.831028	2.105712e-55	2.257343e-52
MsG0780039373.01	MsG0780040498.01	0.815225	1.030999e-51	7.066377e-49
MsG0780039373.01	MsG0780040716.01	0.841812	3.786519e-58	5.628738e-55
MsG0780039373.01	MsG0780040719.01	0.802692	4.972491e-49	2.451595e-46
MsG0780039373.01	MsG0780041246.01	0.813046	3.119828e-51	2.015762e-48
MsG0780039373.01	MsG0780041248.01	0.863894	1.796944e-64	5.535019e-61
MsG0780039373.01	MsG0780041500.01	0.825596	4.301456e-54	3.938413e-51
MsG0780039373.01	MsG0880041977.01	0.811224	7.790903e-51	4.795473e-48
MsG0780039373.01	MsG0880042261.01	0.805695	1.179161e-49	6.280020e-47
MsG0780039373.01	MsG0880043245.01	0.801437	9.010035e-49	4.302728e-46
MsG0780039373.01	MsG0880043688.01	0.818584	1.816041e-52	1.364827e-49
MsG0780039373.01	MsG0880043882.01	0.811964	5.378967e-51	3.376388e-48
MsG0780039373.01	MsG0880044712.01	0.832827	7.569018e-56	8.558514e-53
MsG0780039373.01	MsG0880045801.01	0.839416	1.605178e-57	2.215306e-54
MsG0780039373.01	MsG0880046829.01	0.806479	8.062971e-50	4.380941e-47
MsG0780039373.01	MsG0880046870.01	0.859039	5.448343e-63	1.419137e-59
MsG0780039373.01	MsG0880046946.01	0.821564	3.776261e-53	3.083079e-50
MsG0780039373.01	MsG0880047383.01	0.838907	2.175132e-57	2.955147e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780039373.01.T01	MTR_7g072270	91.892	37	3	1	37	119	155	7.36e-19	78.6
MsG0780039373.01.T01	MTR_7g072170	91.892	37	3	1	37	121	157	1.51e-18	79.3
MsG0780039373.01.T01	MTR_7g072270	91.892	37	3	1	37	119	155	1.90e-18	78.6
MsG0780039373.01.T01	MTR_7g071710	86.486	37	5	1	37	28	64	1.98e-17	73.6
MsG0780039373.01.T01	MTR_7g072120	83.784	37	6	1	37	121	157	1.84e-16	73.6
MsG0780039373.01.T01	MTR_7g072250	86.486	37	5	1	37	150	186	4.81e-16	72.8
MsG0780039373.01.T01	MTR_7g072140	81.081	37	7	1	37	121	157	1.59e-15	70.9
MsG0780039373.01.T01	MTR_4g029430	65.909	44	15	1	44	109	152	1.14e-13	65.9

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780039373.01.T01	AT5G01750	72.973	37	10	1	37	125	161	5.98e-13	63.5
MsG0780039373.01.T01	AT5G01750	72.973	37	10	1	37	125	161	1.16e-12	63.5
MsG0780039373.01.T01	AT2G14560	64.865	37	13	1	37	105	141	2.99e-11	58.9
MsG0780039373.01.T01	AT2G14560	64.865	37	13	1	37	105	141	5.09e-11	58.9

Find 33 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGTCACAAACATCTTCTT+TGG	0.264338	7:-62956815	None:intergenic
AACACCCCTCGTGTTGTTAT+TGG	0.264366	7:+62959282	MsG0780039373.01.T01:CDS
TGTTGTTATTGGTGAGATTC+TGG	0.275031	7:+62959293	MsG0780039373.01.T01:CDS
AGCAAGAAACACGTCTAATT+TGG	0.276680	7:-62956785	None:intergenic
ATAGCTCGGTTTCAAATAAA+TGG	0.277884	7:+62958394	MsG0780039373.01.T01:CDS
GGTTAGAGAGTTACTATGTT+AGG	0.289835	7:+62958365	MsG0780039373.01.T01:CDS
ATGACGTGAGTGTGAATTCT+AGG	0.336812	7:+62959259	MsG0780039373.01.T01:CDS
CATTCAATTGTAGGGGTAGA+AGG	0.378395	7:+62958531	MsG0780039373.01.T01:intron
CATACTGTTGTTGCATGCTC+AGG	0.434160	7:-62958585	None:intergenic
GTTAGAGAGTTACTATGTTA+GGG	0.451497	7:+62958366	MsG0780039373.01.T01:CDS
GTCATCAACATTGCCTCCCA+TGG	0.452584	7:-62959351	None:intergenic
ACTTCAAAGTCAAAGGTAGT+TGG	0.472279	7:+62956833	MsG0780039373.01.T01:CDS
CTAAAGCACATATCAGCGTT+TGG	0.495925	7:-62959373	None:intergenic
TGTTTGATTCACGGCATAAA+CGG	0.506254	7:-62956872	None:intergenic
GTAGTGCAATCTCAGAAGCT+TGG	0.529565	7:+62959222	MsG0780039373.01.T01:intron
AAATGGTGGTTGTTATTCGA+AGG	0.531196	7:+62958411	MsG0780039373.01.T01:CDS
GCAACAATGTGTTTGATTCA+CGG	0.532567	7:-62956881	None:intergenic
GTTTGTGACTTCAAAGTCAA+AGG	0.540662	7:+62956826	MsG0780039373.01.T01:CDS
ATGTTGCTATTGAACAGCCA+TGG	0.555743	7:+62959334	MsG0780039373.01.T01:CDS
AACATCTCCGACATCTGTAT+CGG	0.565660	7:-62959316	None:intergenic
ATGTTAGGGCTAATATAGCT+CGG	0.569416	7:+62958380	MsG0780039373.01.T01:CDS
AATCAAACACATTGTTGCAC+AGG	0.573778	7:+62956886	MsG0780039373.01.T01:CDS
GAAGGTCAACGATTACATGA+AGG	0.598462	7:+62958549	MsG0780039373.01.T01:CDS
TGTTGCTATTGAACAGCCAT+GGG	0.605331	7:+62959335	MsG0780039373.01.T01:CDS
AAGGTCAACGATTACATGAA+GGG	0.614949	7:+62958550	MsG0780039373.01.T01:CDS
GCTCGGTTTCAAATAAATGG+TGG	0.630655	7:+62958397	MsG0780039373.01.T01:CDS
ATTCTGGCCGATACAGATGT+CGG	0.631569	7:+62959309	MsG0780039373.01.T01:CDS
TGCAGGCTCTTAATAAGACA+TGG	0.633987	7:+62958344	MsG0780039373.01.T01:CDS
ATCTCACCAATAACAACACG+AGG	0.641436	7:-62959288	None:intergenic
TGCTATTGAACAGCCATGGG+AGG	0.642714	7:+62959338	MsG0780039373.01.T01:CDS
GCAGCTGTGCAAGAGAAACA+TGG	0.649074	7:+62958436	MsG0780039373.01.T01:CDS
CTCACCAATAACAACACGAG+GGG	0.702307	7:-62959286	None:intergenic
TCTCACCAATAACAACACGA+GGG	0.739335	7:-62959287	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTAACAAATCAACTTTTA+TGG	+	Chr7:62957191-62957210	MsG0780039373.01.T01:intron	15.0%
!!	AAATAGACCAATGAAAAAAT+AGG	-	Chr7:62959060-62959079	None:intergenic	20.0%
!!	ATATAAAAAAAAAGGTGAGA+GGG	+	Chr7:62957818-62957837	MsG0780039373.01.T01:intron	20.0%
!!	TAACTGATAATTACAATGAT+TGG	-	Chr7:62957483-62957502	None:intergenic	20.0%
!!	TATATAAAAAAAAAGGTGAG+AGG	+	Chr7:62957817-62957836	MsG0780039373.01.T01:intron	20.0%
!!	TCAGTTATTAGTTGTTATAT+TGG	+	Chr7:62957496-62957515	MsG0780039373.01.T01:intron	20.0%
!!	TCCAGTGATAATTAAATTAA+GGG	-	Chr7:62957160-62957179	None:intergenic	20.0%
!!	TGTTCTTTCTAAATAAACTA+CGG	+	Chr7:62958832-62958851	MsG0780039373.01.T01:intron	20.0%
!!!	ACAAAGAAGAAATTTTATCT+TGG	+	Chr7:62957019-62957038	MsG0780039373.01.T01:intron	20.0%
!!!	ACTTGTTAATGATTCAAAAA+AGG	-	Chr7:62957112-62957131	None:intergenic	20.0%
!!!	CAAAGAAGAAATTTTATCTT+GGG	+	Chr7:62957020-62957039	MsG0780039373.01.T01:intron	20.0%
!	AAAACTAAATATTCGCTTGT+TGG	-	Chr7:62956938-62956957	None:intergenic	25.0%
!	ACATAGTACATGAAGATTTA+CGG	+	Chr7:62958205-62958224	MsG0780039373.01.T01:intron	25.0%
!	ACCAATGAAAAAATAGGAAT+CGG	-	Chr7:62959054-62959073	None:intergenic	25.0%
!	ACCCTTAATTTAATTATCAC+TGG	+	Chr7:62957156-62957175	MsG0780039373.01.T01:intron	25.0%
!	ATTGTGATGATTGTATTCAA+TGG	-	Chr7:62957593-62957612	None:intergenic	25.0%
!	GTCCAGTGATAATTAAATTA+AGG	-	Chr7:62957161-62957180	None:intergenic	25.0%
!	GTTCTTTCTAAATAAACTAC+GGG	+	Chr7:62958833-62958852	MsG0780039373.01.T01:intron	25.0%
!	TTGTTATCTATAACATTGCT+CGG	+	Chr7:62959110-62959129	MsG0780039373.01.T01:intron	25.0%
!!!	ACTTCTTAAAAAGTGTCTTA+AGG	-	Chr7:62956999-62957018	None:intergenic	25.0%
!!!	CTTCTTAAAAAGTGTCTTAA+GGG	-	Chr7:62956998-62957017	None:intergenic	25.0%
!!!	CTTTTATTTTACCAACATAC+CGG	+	Chr7:62958179-62958198	MsG0780039373.01.T01:intron	25.0%
!!!	TTTTTGAAGACATGACATAT+TGG	+	Chr7:62958047-62958066	MsG0780039373.01.T01:intron	25.0%
	AAGATCTTATCTATCTGATG+TGG	+	Chr7:62958908-62958927	MsG0780039373.01.T01:intron	30.0%
	AATGAAAAAATAGGAATCGG+CGG	-	Chr7:62959051-62959070	None:intergenic	30.0%
	AGATATTGGAGGTAAATTAG+TGG	+	Chr7:62958491-62958510	MsG0780039373.01.T01:intron	30.0%
	AGATCTTATCTATCTGATGT+GGG	+	Chr7:62958909-62958928	MsG0780039373.01.T01:intron	30.0%
	ATACATGGTTGGGATAATTT+CGG	-	Chr7:62958974-62958993	None:intergenic	30.0%
	ATAGCTCGGTTTCAAATAAA+TGG	+	Chr7:62958394-62958413	MsG0780039373.01.T01:CDS	30.0%
	CAAGAGTAGATATACAACAA+AGG	-	Chr7:62957567-62957586	None:intergenic	30.0%
	GAGATTAACAGTGAAGAAAA+GGG	+	Chr7:62957344-62957363	MsG0780039373.01.T01:intron	30.0%
	GTTAGAGAGTTACTATGTTA+GGG	+	Chr7:62958366-62958385	MsG0780039373.01.T01:CDS	30.0%
	TAATGGAAGTCAACAAACAA+AGG	-	Chr7:62959006-62959025	None:intergenic	30.0%
	TATGTATTCTCTTGATCACA+AGG	+	Chr7:62958767-62958786	MsG0780039373.01.T01:intron	30.0%
	TCATATTCTAAACGTGAAGA+GGG	-	Chr7:62958861-62958880	None:intergenic	30.0%
	TGAGATTAACAGTGAAGAAA+AGG	+	Chr7:62957343-62957362	MsG0780039373.01.T01:intron	30.0%
	TGGATGGTTAATGAATTCAA+TGG	+	Chr7:62957747-62957766	MsG0780039373.01.T01:intron	30.0%
	TGTTAGCAGTAAAAATTCAG+TGG	-	Chr7:62959144-62959163	None:intergenic	30.0%
	TTCATATTCTAAACGTGAAG+AGG	-	Chr7:62958862-62958881	None:intergenic	30.0%
	TTGAATTCATTAACCATCCA+AGG	-	Chr7:62957747-62957766	None:intergenic	30.0%
!	ACTTTTGCTCATTCAATTGT+AGG	+	Chr7:62958522-62958541	MsG0780039373.01.T01:intron	30.0%
!	CTGAATTTTTACTGCTAACA+AGG	+	Chr7:62959144-62959163	MsG0780039373.01.T01:intron	30.0%
!	CTTTTGCTCATTCAATTGTA+GGG	+	Chr7:62958523-62958542	MsG0780039373.01.T01:intron	30.0%
!	TATGAAAGCGTAATCAACAT+TGG	-	Chr7:62957300-62957319	None:intergenic	30.0%
!	TATTCGCTTGTTGGTTATAT+AGG	-	Chr7:62956929-62956948	None:intergenic	30.0%
!	TTTTGCTCATTCAATTGTAG+GGG	+	Chr7:62958524-62958543	MsG0780039373.01.T01:intron	30.0%
!!	GCATATTGCTGATTTAGAAT+GGG	+	Chr7:62958628-62958647	MsG0780039373.01.T01:intron	30.0%
!!	TGCATATTGCTGATTTAGAA+TGG	+	Chr7:62958627-62958646	MsG0780039373.01.T01:intron	30.0%
!!!	TTACTCGATGAAGTTTTGTT+CGG	+	Chr7:62957380-62957399	MsG0780039373.01.T01:intron	30.0%
	AAGAAGAACTCAGATATTGG+AGG	+	Chr7:62958480-62958499	MsG0780039373.01.T01:intron	35.0%
	AAGGCTATGATGCATGTAAA+TGG	+	Chr7:62959163-62959182	MsG0780039373.01.T01:intron	35.0%
	AAGGTCAACGATTACATGAA+GGG	+	Chr7:62958550-62958569	MsG0780039373.01.T01:CDS	35.0%
	AATCAAACACATTGTTGCAC+AGG	+	Chr7:62956886-62956905	MsG0780039373.01.T01:CDS	35.0%
	ACCAAGAAGAACTCAGATAT+TGG	+	Chr7:62958477-62958496	MsG0780039373.01.T01:intron	35.0%
	ACTTCAAAGTCAAAGGTAGT+TGG	+	Chr7:62956833-62956852	MsG0780039373.01.T01:CDS	35.0%
	AGCAAGAAACACGTCTAATT+TGG	-	Chr7:62956788-62956807	None:intergenic	35.0%
	ATCAGAGTACAGAATCCAAT+GGG	+	Chr7:62958139-62958158	MsG0780039373.01.T01:intron	35.0%
	ATGTCATGTCTTCAAAAACC+CGG	-	Chr7:62958045-62958064	None:intergenic	35.0%
	ATGTTAGGGCTAATATAGCT+CGG	+	Chr7:62958380-62958399	MsG0780039373.01.T01:CDS	35.0%
	ATTGGAGGTAAATTAGTGGA+AGG	+	Chr7:62958495-62958514	MsG0780039373.01.T01:intron	35.0%
	CACAATTGCATTCTCTAACT+TGG	+	Chr7:62957607-62957626	MsG0780039373.01.T01:intron	35.0%
	GAAGTCACAAACATCTTCTT+TGG	-	Chr7:62956818-62956837	None:intergenic	35.0%
	GAAGTGTAGAATACATGGTT+GGG	-	Chr7:62958984-62959003	None:intergenic	35.0%
	GAGTAACAATGGATAAGGAA+GGG	+	Chr7:62957946-62957965	MsG0780039373.01.T01:intron	35.0%
	GATAAACTGTGACCATGAAA+TGG	-	Chr7:62957278-62957297	None:intergenic	35.0%
	GATTGGTAAAGACCATTTCA+TGG	+	Chr7:62957263-62957282	MsG0780039373.01.T01:intron	35.0%
	GCAACAATGTGTTTGATTCA+CGG	-	Chr7:62956884-62956903	None:intergenic	35.0%
	GGTTAGAGAGTTACTATGTT+AGG	+	Chr7:62958365-62958384	MsG0780039373.01.T01:CDS	35.0%
	GTATACGATCAATAACTCCT+TGG	+	Chr7:62957727-62957746	MsG0780039373.01.T01:intron	35.0%
	GTATTGTCATAAAGCCTACA+TGG	+	Chr7:62957521-62957540	MsG0780039373.01.T01:intron	35.0%
	GTTATTGATCGTATACTTGC+CGG	-	Chr7:62957723-62957742	None:intergenic	35.0%
	GTTTGTGACTTCAAAGTCAA+AGG	+	Chr7:62956826-62956845	MsG0780039373.01.T01:CDS	35.0%
	TACATGGTTGGGATAATTTC+GGG	-	Chr7:62958973-62958992	None:intergenic	35.0%
	TATCAGAGTACAGAATCCAA+TGG	+	Chr7:62958138-62958157	MsG0780039373.01.T01:intron	35.0%
	TATCCATTGTTACTCACCAA+CGG	-	Chr7:62957941-62957960	None:intergenic	35.0%
	TCCAATATCTGAGTTCTTCT+TGG	-	Chr7:62958481-62958500	None:intergenic	35.0%
	TGAGTAACAATGGATAAGGA+AGG	+	Chr7:62957945-62957964	MsG0780039373.01.T01:intron	35.0%
	TGTTTGATTCACGGCATAAA+CGG	-	Chr7:62956875-62956894	None:intergenic	35.0%
	TTGGTGAGTAACAATGGATA+AGG	+	Chr7:62957941-62957960	MsG0780039373.01.T01:intron	35.0%
!	AAATGGTGGTTGTTATTCGA+AGG	+	Chr7:62958411-62958430	MsG0780039373.01.T01:CDS	35.0%
!	ACTGTTCAGAGTCTTTTGAT+TGG	+	Chr7:62957246-62957265	MsG0780039373.01.T01:intron	35.0%
!	CAAAGGAAGTGTAGAATACA+TGG	-	Chr7:62958989-62959008	None:intergenic	35.0%
!	TGTTGATTACGCTTTCATAG+TGG	+	Chr7:62957301-62957320	MsG0780039373.01.T01:intron	35.0%
!	TGTTGTTATTGGTGAGATTC+TGG	+	Chr7:62959293-62959312	MsG0780039373.01.T01:CDS	35.0%
!!!	GCCGATTCCTATTTTTTCAT+TGG	+	Chr7:62959050-62959069	MsG0780039373.01.T01:intron	35.0%
!!!	GTTTTTTCTTCGTACGGTTT+TGG	+	Chr7:62958298-62958317	MsG0780039373.01.T01:intron	35.0%
!!!	TACTCGATGAAGTTTTGTTC+GGG	+	Chr7:62957381-62957400	MsG0780039373.01.T01:intron	35.0%
	AACAACCAGAAGAACACCAA+TGG	-	Chr7:62958244-62958263	None:intergenic	40.0%
	AACATCTCCGACATCTGTAT+CGG	-	Chr7:62959319-62959338	None:intergenic	40.0%
	ACGATCAATAACTCCTTGGA+TGG	+	Chr7:62957731-62957750	MsG0780039373.01.T01:intron	40.0%
	ACGTTAGAAAGCTACTCAAC+CGG	+	Chr7:62958023-62958042	MsG0780039373.01.T01:intron	40.0%
	ATAAAGCCTACATGGTCGTA+GGG	+	Chr7:62957529-62957548	MsG0780039373.01.T01:intron	40.0%
	ATCCAGGTTTCAGATGATAC+AGG	+	Chr7:62958715-62958734	MsG0780039373.01.T01:intron	40.0%
	ATCTCACCAATAACAACACG+AGG	-	Chr7:62959291-62959310	None:intergenic	40.0%
	ATGACGTGAGTGTGAATTCT+AGG	+	Chr7:62959259-62959278	MsG0780039373.01.T01:CDS	40.0%
	ATTCTTGGTCTGTAGTGATG+CGG	+	Chr7:62957998-62958017	MsG0780039373.01.T01:intron	40.0%
	CATTCAATTGTAGGGGTAGA+AGG	+	Chr7:62958531-62958550	MsG0780039373.01.T01:intron	40.0%
	CTAATCATGCCATTGAAGAC+CGG	+	Chr7:62957701-62957720	MsG0780039373.01.T01:intron	40.0%
	CTATCTGATGTGGGACTAAA+TGG	+	Chr7:62958918-62958937	MsG0780039373.01.T01:intron	40.0%
	GAAGAAAAGGGAAGTGAATC+AGG	+	Chr7:62957356-62957375	MsG0780039373.01.T01:intron	40.0%
	GAAGGTCAACGATTACATGA+AGG	+	Chr7:62958549-62958568	MsG0780039373.01.T01:CDS	40.0%
	GCTCGGTTTCAAATAAATGG+TGG	+	Chr7:62958397-62958416	MsG0780039373.01.T01:CDS	40.0%
	TAGAACTTCACTTGTCCCAT+TGG	-	Chr7:62958157-62958176	None:intergenic	40.0%
	TCATGCTAACAAGTGCTCTT+AGG	-	Chr7:62957137-62957156	None:intergenic	40.0%
	TCTCACCAATAACAACACGA+GGG	-	Chr7:62959290-62959309	None:intergenic	40.0%
	TCTTCATGTACTATGTGCTC+CGG	-	Chr7:62958201-62958220	None:intergenic	40.0%
	TGAGATAGGGAAAAATGTGC+AGG	+	Chr7:62958327-62958346	MsG0780039373.01.T01:intron	40.0%
	TGCAGGCTCTTAATAAGACA+TGG	+	Chr7:62958344-62958363	MsG0780039373.01.T01:CDS	40.0%
	TGGTTGTTTACCTTTCGAAG+AGG	+	Chr7:62958256-62958275	MsG0780039373.01.T01:intron	40.0%
	TTGGATGAACACATGTACCT+CGG	+	Chr7:62958066-62958085	MsG0780039373.01.T01:intron	40.0%
	TTGTTTACCTTTCGAAGAGG+AGG	+	Chr7:62958259-62958278	MsG0780039373.01.T01:intron	40.0%
!	AACCTGTATCATCTGAAACC+TGG	-	Chr7:62958720-62958739	None:intergenic	40.0%
!	ACGGCAAGTTGGGTAAATAA+TGG	-	Chr7:62959023-62959042	None:intergenic	40.0%
!	ATGTTGCTATTGAACAGCCA+TGG	+	Chr7:62959334-62959353	MsG0780039373.01.T01:CDS	40.0%
!	GATTTAGAATGGGCGCAAAA+AGG	+	Chr7:62958638-62958657	MsG0780039373.01.T01:intron	40.0%
!	GGAAGTGTAGAATACATGGT+TGG	-	Chr7:62958985-62959004	None:intergenic	40.0%
!	TCAGAGCACTTAAGCCTTAA+AGG	+	Chr7:62957632-62957651	MsG0780039373.01.T01:intron	40.0%
!	TGTTGCTATTGAACAGCCAT+GGG	+	Chr7:62959335-62959354	MsG0780039373.01.T01:CDS	40.0%
!!	ATTTCTAGTCGTGATCTGCT+CGG	+	Chr7:62959076-62959095	MsG0780039373.01.T01:intron	40.0%
!!	GTTTTGGCACGTTTGAGATA+GGG	+	Chr7:62958314-62958333	MsG0780039373.01.T01:intron	40.0%
!!!	ACTCGATGAAGTTTTGTTCG+GGG	+	Chr7:62957382-62957401	MsG0780039373.01.T01:intron	40.0%
!!!	GCAAGCGTTTTTTCTTCGTA+CGG	+	Chr7:62958292-62958311	MsG0780039373.01.T01:intron	40.0%
	AGACCTTCTTTCCCTTCCAA+GGG	-	Chr7:62958746-62958765	None:intergenic	45.0%
	ATAGGAATCGGCGGAAATCA+CGG	-	Chr7:62959042-62959061	None:intergenic	45.0%
	ATTCGTTCCTCCTCTTCGAA+AGG	-	Chr7:62958269-62958288	None:intergenic	45.0%
	ATTCTGGCCGATACAGATGT+CGG	+	Chr7:62959309-62959328	MsG0780039373.01.T01:CDS	45.0%
	CATAAAGCCTACATGGTCGT+AGG	+	Chr7:62957528-62957547	MsG0780039373.01.T01:intron	45.0%
	CATACTGTTGTTGCATGCTC+AGG	-	Chr7:62958588-62958607	None:intergenic	45.0%
	CGGTCTTCAATGGCATGATT+AGG	-	Chr7:62957703-62957722	None:intergenic	45.0%
	CGTTAGAAAGCTACTCAACC+GGG	+	Chr7:62958024-62958043	MsG0780039373.01.T01:intron	45.0%
	CTCACCAATAACAACACGAG+GGG	-	Chr7:62959289-62959308	None:intergenic	45.0%
	CTCTGGTTAGCGAAACACAT+GGG	+	Chr7:62957973-62957992	MsG0780039373.01.T01:intron	45.0%
	CTCTTCAGGACTGTCCTTTA+AGG	-	Chr7:62957649-62957668	None:intergenic	45.0%
	CTGAGCATGCAACAACAGTA+TGG	+	Chr7:62958586-62958605	MsG0780039373.01.T01:intron	45.0%
	CTTCTTGCCTGAATCTGCAA+AGG	-	Chr7:62957680-62957699	None:intergenic	45.0%
	GGATAAGGAAGGGATTTCTC+TGG	+	Chr7:62957956-62957975	MsG0780039373.01.T01:intron	45.0%
	GTACATGAAGATTTACGGCG+AGG	+	Chr7:62958210-62958229	MsG0780039373.01.T01:intron	45.0%
	GTAGTGCAATCTCAGAAGCT+TGG	+	Chr7:62959222-62959241	MsG0780039373.01.T01:intron	45.0%
	GTATACTTGCCGGTCTTCAA+TGG	-	Chr7:62957713-62957732	None:intergenic	45.0%
	TACTATGTGCTCCGGTATGT+TGG	-	Chr7:62958193-62958212	None:intergenic	45.0%
	TCGAAGAGGAGGAACGAATT+GGG	+	Chr7:62958270-62958289	MsG0780039373.01.T01:intron	45.0%
	TCTCTGGTTAGCGAAACACA+TGG	+	Chr7:62957972-62957991	MsG0780039373.01.T01:intron	45.0%
	TCTGGTTAGCGAAACACATG+GGG	+	Chr7:62957974-62957993	MsG0780039373.01.T01:intron	45.0%
	TTCGAAGAGGAGGAACGAAT+TGG	+	Chr7:62958269-62958288	MsG0780039373.01.T01:intron	45.0%
!	AACACCCCTCGTGTTGTTAT+TGG	+	Chr7:62959282-62959301	MsG0780039373.01.T01:CDS	45.0%
!	CTCGGCATGGAAAGTTTTCA+CGG	+	Chr7:62958084-62958103	MsG0780039373.01.T01:intron	45.0%
!	CTTGACCATTGGTGTTCTTC+TGG	+	Chr7:62958236-62958255	MsG0780039373.01.T01:intron	45.0%
!	GAATGGGCGCAAAAAGGTAT+AGG	+	Chr7:62958644-62958663	MsG0780039373.01.T01:intron	45.0%
!	TCGGCATGGAAAGTTTTCAC+GGG	+	Chr7:62958085-62958104	MsG0780039373.01.T01:intron	45.0%
!	TTTCTAGTCGTGATCTGCTC+GGG	+	Chr7:62959077-62959096	MsG0780039373.01.T01:intron	45.0%
!!	GGTTTTGGCACGTTTGAGAT+AGG	+	Chr7:62958313-62958332	MsG0780039373.01.T01:intron	45.0%
!!!	CTCGATGAAGTTTTGTTCGG+GGG	+	Chr7:62957383-62957402	MsG0780039373.01.T01:intron	45.0%
!!	AAAATTTAGAAATAATAATT+TGG	+	Chr7:62959188-62959207	MsG0780039373.01.T01:intron	5.0%
!!!	AAAAAAGTATATAAAAAAAA+AGG	+	Chr7:62957810-62957829	MsG0780039373.01.T01:intron	5.0%
!!!	TTTTTTTATATACTTTTTTA+AGG	-	Chr7:62957809-62957828	None:intergenic	5.0%
	ACGGGGTCAAGGTAAGAGAT+AGG	+	Chr7:62958103-62958122	MsG0780039373.01.T01:intron	50.0%
	AGAGAGAGAGAGAGAGAGAG+TGG	+	Chr7:62957847-62957866	MsG0780039373.01.T01:intron	50.0%
	ATACAGGTTGCACCCTTGGA+AGG	+	Chr7:62958731-62958750	MsG0780039373.01.T01:intron	50.0%
	CAAAGGTGGCAACACTCTTC+AGG	-	Chr7:62957663-62957682	None:intergenic	50.0%
	CGAAACACATGGGGGATTCT+TGG	+	Chr7:62957983-62958002	MsG0780039373.01.T01:intron	50.0%
	CGTGAAAACTTTCCATGCCG+AGG	-	Chr7:62958086-62958105	None:intergenic	50.0%
	CTGGTTAGCGAAACACATGG+GGG	+	Chr7:62957975-62957994	MsG0780039373.01.T01:intron	50.0%
	CTTGCCTGAATCTGCAAAGG+TGG	-	Chr7:62957677-62957696	None:intergenic	50.0%
	GAGACCTTCTTTCCCTTCCA+AGG	-	Chr7:62958747-62958766	None:intergenic	50.0%
	GATGATACAGGTTGCACCCT+TGG	+	Chr7:62958727-62958746	MsG0780039373.01.T01:intron	50.0%
	GCAGCTGTGCAAGAGAAACA+TGG	+	Chr7:62958436-62958455	MsG0780039373.01.T01:CDS	50.0%
	GTCATCAACATTGCCTCCCA+TGG	-	Chr7:62959354-62959373	None:intergenic	50.0%
	GTTGCCACCTTTGCAGATTC+AGG	+	Chr7:62957670-62957689	MsG0780039373.01.T01:intron	50.0%
	TACAGGTTGCACCCTTGGAA+GGG	+	Chr7:62958732-62958751	MsG0780039373.01.T01:intron	50.0%
	TAGCAACGTTTCGTCGATCC+AGG	+	Chr7:62958699-62958718	MsG0780039373.01.T01:intron	50.0%
	TGAACACATGTACCTCGGCA+TGG	+	Chr7:62958071-62958090	MsG0780039373.01.T01:intron	50.0%
	TGCTATTGAACAGCCATGGG+AGG	+	Chr7:62959338-62959357	MsG0780039373.01.T01:CDS	50.0%
	TGTTACTCACCAACGGCGAT+CGG	-	Chr7:62957934-62957953	None:intergenic	50.0%
!	CGGCATGGAAAGTTTTCACG+GGG	+	Chr7:62958086-62958105	MsG0780039373.01.T01:intron	50.0%
!	GGAAAGTTTTCACGGGGTCA+AGG	+	Chr7:62958092-62958111	MsG0780039373.01.T01:intron	50.0%
!	TCGCCGTTGGTGAGTAACAA+TGG	+	Chr7:62957935-62957954	MsG0780039373.01.T01:intron	50.0%
	AACGGCGATCGGAGATGTGT+CGG	-	Chr7:62957923-62957942	None:intergenic	55.0%
	ACCAAGGGTGGTCATACGAC+AGG	+	Chr7:62957894-62957913	MsG0780039373.01.T01:intron	55.0%
	ACCTGTCGTATGACCACCCT+TGG	-	Chr7:62957898-62957917	None:intergenic	55.0%
	AGAGAGAGAGTGGCAACCCT+AGG	+	Chr7:62957867-62957886	MsG0780039373.01.T01:intron	55.0%
	AGCCTACATGGTCGTAGGGT+CGG	+	Chr7:62957533-62957552	MsG0780039373.01.T01:intron	55.0%
	ATCCGACCCTACGACCATGT+AGG	-	Chr7:62957538-62957557	None:intergenic	55.0%
	CGGCGAGGATTCTTGACCAT+TGG	+	Chr7:62958225-62958244	MsG0780039373.01.T01:intron	55.0%
	GCACCCTTGGAAGGGAAAGA+AGG	+	Chr7:62958740-62958759	MsG0780039373.01.T01:intron	55.0%
	GGCGGAAATCACGGCAAGTT+GGG	-	Chr7:62959033-62959052	None:intergenic	55.0%
	ACCACCCTTGGTCGTGCCTA+GGG	-	Chr7:62957886-62957905	None:intergenic	60.0%
	CGGCGGAAATCACGGCAAGT+TGG	-	Chr7:62959034-62959053	None:intergenic	60.0%
	GACACATCTCCGATCGCCGT+TGG	+	Chr7:62957922-62957941	MsG0780039373.01.T01:intron	60.0%
	GCAACCCTAGGCACGACCAA+GGG	+	Chr7:62957879-62957898	MsG0780039373.01.T01:intron	60.0%
	ACCCTAGGCACGACCAAGGG+TGG	+	Chr7:62957882-62957901	MsG0780039373.01.T01:intron	65.0%
	GACCACCCTTGGTCGTGCCT+AGG	-	Chr7:62957887-62957906	None:intergenic	65.0%
	GGCAACCCTAGGCACGACCA+AGG	+	Chr7:62957878-62957897	MsG0780039373.01.T01:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	62956772	62959383	62956772	ID=MsG0780039373.01;Name=MsG0780039373.01
Chr7	mRNA	62956772	62959383	62956772	ID=MsG0780039373.01.T01;Parent=MsG0780039373.01;Name=MsG0780039373.01.T01;_AED=0.84;_eAED=0.84;_QI=0\|0\|0\|0.25\|1\|1\|4\|0\|154
Chr7	exon	62956772	62956907	62956772	ID=MsG0780039373.01.T01:exon:16905;Parent=MsG0780039373.01.T01
Chr7	exon	62958335	62958457	62958335	ID=MsG0780039373.01.T01:exon:16904;Parent=MsG0780039373.01.T01
Chr7	exon	62958544	62958602	62958544	ID=MsG0780039373.01.T01:exon:16903;Parent=MsG0780039373.01.T01
Chr7	exon	62959237	62959383	62959237	ID=MsG0780039373.01.T01:exon:16902;Parent=MsG0780039373.01.T01
Chr7	CDS	62956772	62956907	62956772	ID=MsG0780039373.01.T01:cds;Parent=MsG0780039373.01.T01
Chr7	CDS	62958335	62958457	62958335	ID=MsG0780039373.01.T01:cds;Parent=MsG0780039373.01.T01
Chr7	CDS	62958544	62958602	62958544	ID=MsG0780039373.01.T01:cds;Parent=MsG0780039373.01.T01
Chr7	CDS	62959237	62959383	62959237	ID=MsG0780039373.01.T01:cds;Parent=MsG0780039373.01.T01

Gene Sequence

>MsG0780039373.01.T01

ATGCAATTGAAGACCAAATTAGACGTGTTTCTTGCTAATAACACCAAAGAAGATGTTTGTGACTTCAAAGTCAAAGGTAGTTGGTTCGAACGATCTTGCACCGTTTATGCCGTGAATCAAACACATTGTTGCACAGGGAAAAATGTGCAGGCTCTTAATAAGACATGGTTAGAGAGTTACTATGTTAGGGCTAATATAGCTCGGTTTCAAATAAATGGTGGTTGTTATTCGAAGGAAGCAGCTGTGCAAGAGAAACATGGGGTAGAAGGTCAACGATTACATGAAGGGTCACTTGTTCAACCTGAGCATGCAACAACAAAGCTTGGAAGTGATAATCATCATGACGTGAGTGTGAATTCTAGGAACACCCCTCGTGTTGTTATTGGTGAGATTCTGGCCGATACAGATGTCGGAGATGTTGCTATTGAACAGCCATGGGAGGCAATGTTGATGACCAAACGCTGA

Protein sequence

>MsG0780039373.01.T01

MQLKTKLDVFLANNTKEDVCDFKVKGSWFERSCTVYAVNQTHCCTGKNVQALNKTWLESYYVRANIARFQINGGCYSKEAAVQEKHGVEGQRLHEGSLVQPEHATTKLGSDNHHDVSVNSRNTPRVVIGEILADTDVGDVAIEQPWEAMLMTKR*