AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031713.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031713.01.T01 MTR_6g033025 97.115 312 9 0 1 312 1 312 0.0 625
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031713.01.T01 AT5G17570 69.256 309 90 1 2 310 1 304 4.34e-160 449
MsG0680031713.01.T01 AT5G17570 69.256 309 90 1 2 310 1 304 6.19e-160 449
MsG0680031713.01.T01 AT3G03500 57.282 309 92 2 2 310 1 269 1.30e-123 355
MsG0680031713.01.T01 AT3G03500 63.452 197 72 0 2 198 1 197 1.90e-93 276
MsG0680031713.01.T01 AT3G03500 54.733 243 70 2 68 310 33 235 6.73e-86 258

Find 63 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTCTTGTTTATGATTCT+TGG 0.213076 6:-25142761 None:intergenic
CTTCCTTTGGTCTCCATCCC+TGG 0.297899 6:+25142900 MsG0680031713.01.T01:CDS
CCTTCTGTTCTTCCTTCCTT+TGG 0.311848 6:+25142887 MsG0680031713.01.T01:CDS
TCTCTTGACAATGTGCTTCA+TGG 0.320207 6:+25148253 MsG0680031713.01.T01:CDS
CTTCAACGTCTTCAACCAAT+TGG 0.344916 6:-25144556 None:intergenic
GTGTCTTGTTTATGATTCTT+GGG 0.345527 6:-25142760 None:intergenic
AAAATCAATCTTCTTTCCTT+GGG 0.372466 6:-25144882 None:intergenic
GTCTTACACTTTGCTGTTAA+CGG 0.380768 6:+25142815 MsG0680031713.01.T01:CDS
TTCAACGTCTTCAACCAATT+GGG 0.385275 6:-25144555 None:intergenic
GTACATTGTGTTCGTGCTTA+CGG 0.389384 6:+25145584 MsG0680031713.01.T01:CDS
TATGTCACTAAAAGCTAATA+AGG 0.393389 6:+25148016 MsG0680031713.01.T01:CDS
AGAATAAGCGAACTGCATTC+TGG 0.394096 6:-25149185 None:intergenic
TTCAACAATTCATAAACTTA+CGG 0.415064 6:-25142700 None:intergenic
GTTGTCCTTCATTCTTACCT+AGG 0.416524 6:+25147930 MsG0680031713.01.T01:CDS
ACGGAGTTTCTGAACAAGAT+TGG 0.436828 6:+25142834 MsG0680031713.01.T01:CDS
TTCGACTTTGGTAGAGCATC+GGG 0.447737 6:-25148196 None:intergenic
CTCTTCCGATAGGATGTTGT+TGG 0.463794 6:+25148162 MsG0680031713.01.T01:CDS
GTTCGCTTATTCTCCTATGA+AGG 0.470681 6:+25149195 MsG0680031713.01.T01:CDS
AGAGAATCTATGTTCGACTT+TGG 0.477960 6:-25148208 None:intergenic
TTGCAGAGAGGAGCCCCAAT+TGG 0.482756 6:+25144541 MsG0680031713.01.T01:CDS
TTCTAAATGTTCCAGGTCTG+TGG 0.496419 6:+25147890 MsG0680031713.01.T01:intron
TATGCTAGAGATTACAAAAG+AGG 0.500520 6:+25149143 MsG0680031713.01.T01:CDS
GTTCGACTTTGGTAGAGCAT+CGG 0.504071 6:-25148197 None:intergenic
TTACCTAGGTTCAGCAGAGA+TGG 0.514272 6:+25147944 MsG0680031713.01.T01:CDS
GTAACATCGAAGCATCAGTT+AGG 0.519550 6:-25148333 None:intergenic
CCAAAGGAAGGAAGAACAGA+AGG 0.519584 6:-25142887 None:intergenic
CTATTTAGGTCTCTTCCGAT+AGG 0.527734 6:+25148152 MsG0680031713.01.T01:intron
TCGAAGCATCAGTTAGGACT+TGG 0.529353 6:-25148327 None:intergenic
CGTTATGAATGTTAGCCGGA+TGG 0.532725 6:-25148372 None:intergenic
AGGACTTGGGACGAATTAGC+GGG 0.533334 6:-25148313 None:intergenic
AGGACAACACCAGCAGGAAA+AGG 0.538586 6:-25147915 None:intergenic
CGAACACAATGTACAGATGC+TGG 0.542316 6:-25145575 None:intergenic
GAAGGATACACTCAACCATC+CGG 0.550149 6:+25148357 MsG0680031713.01.T01:CDS
GGCGAAGAAAATGCTGAAGA+TGG 0.551302 6:+25148037 MsG0680031713.01.T01:CDS
TCAACGTCTTCAACCAATTG+GGG 0.551486 6:-25144554 None:intergenic
CAATTGGTTGAAGACGTTGA+AGG 0.554473 6:+25144557 MsG0680031713.01.T01:CDS
TAGGACTTGGGACGAATTAG+CGG 0.558442 6:-25148314 None:intergenic
TACCTCTCCAACTGCAGCAG+AGG 0.560264 6:-25144598 None:intergenic
GAATGAAGGACAACACCAGC+AGG 0.563907 6:-25147921 None:intergenic
CTATGCAGGTTGAAGTATTG+AGG 0.565024 6:+25145519 MsG0680031713.01.T01:intron
TCAAAATATACATTAATCGA+TGG 0.569137 6:-25149390 None:intergenic
TCTAAATGTTCCAGGTCTGT+GGG 0.580026 6:+25147891 MsG0680031713.01.T01:intron
ACCCTCTGCTGCAGTTGGAG+AGG 0.580522 6:+25144596 MsG0680031713.01.T01:CDS
TCTACACCCTCTGCTGCAGT+TGG 0.582522 6:+25144591 MsG0680031713.01.T01:CDS
GGGAGAAGAATCAGAAGTTG+AGG 0.586811 6:-25148293 None:intergenic
ACCTCTCCAACTGCAGCAGA+GGG 0.588835 6:-25144597 None:intergenic
GCACCAAGCTTTGAAAACTC+AGG 0.593705 6:-25147969 None:intergenic
CTTACGTTATGAATGTTAGC+CGG 0.594181 6:-25148376 None:intergenic
GGATGGTTGAGTGTATCCTT+CGG 0.594205 6:-25148355 None:intergenic
CCACAGATTGGATTGGACAA+AGG 0.600003 6:+25144857 MsG0680031713.01.T01:intron
TGTCTCCAACAACATCCTAT+CGG 0.604083 6:-25148167 None:intergenic
CAAAGGAAGGAAGAACAGAA+GGG 0.605180 6:-25142886 None:intergenic
CTGAACCTAGGTAAGAATGA+AGG 0.608083 6:-25147935 None:intergenic
GAACCATCTCTGCTGAACCT+AGG 0.613905 6:-25147947 None:intergenic
CGAAGCATCAGTTAGGACTT+GGG 0.625448 6:-25148326 None:intergenic
GGATTGGACAAAGGATCCCA+AGG 0.626617 6:+25144866 MsG0680031713.01.T01:CDS
AAACCAGGGATGGAGACCAA+AGG 0.626952 6:-25142903 None:intergenic
TGACATAAGAAATCCAGAGA+AGG 0.627443 6:-25148000 None:intergenic
ATTAAAACAGCACAAGACAC+TGG 0.635495 6:+25142791 MsG0680031713.01.T01:CDS
CAGGGATGGAGACCAAAGGA+AGG 0.643047 6:-25142899 None:intergenic
TATGCAAGACAGTGTCTAGG+TGG 0.649272 6:-25149341 None:intergenic
TGATGCTTCGATGTTACCGA+AGG 0.660025 6:+25148339 MsG0680031713.01.T01:CDS
TTTATGTAGTTGAGTCAATG+TGG 0.707985 6:-25149457 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGAATTAAAAAACATA+TGG - Chr6:25147663-25147682 None:intergenic 10.0%
!! AATTAAATTAACAAAAAAAG+AGG - Chr6:25142958-25142977 None:intergenic 10.0%
!! ATAAGAATTAAAAAACATAT+GGG - Chr6:25147662-25147681 None:intergenic 10.0%
!! TGATAAATTATAAATGAAAT+TGG + Chr6:25144732-25144751 MsG0680031713.01.T01:intron 10.0%
!!! TTTAATTCTTATTGTTATTA+TGG + Chr6:25147670-25147689 MsG0680031713.01.T01:intron 10.0%
!! AAATTTAAAAAAATGGGAAA+AGG - Chr6:25148949-25148968 None:intergenic 15.0%
!! GTGTAACATAAAAAAAATAT+GGG - Chr6:25143286-25143305 None:intergenic 15.0%
!! TATTCTATTCTATTCTATTT+AGG + Chr6:25148138-25148157 MsG0680031713.01.T01:intron 15.0%
!! TGTAACATAAAAAAAATATG+GGG - Chr6:25143285-25143304 None:intergenic 15.0%
!! TGTGTAACATAAAAAAAATA+TGG - Chr6:25143287-25143306 None:intergenic 15.0%
!! TTCAAAAATAAACAAATTAC+AGG + Chr6:25149229-25149248 MsG0680031713.01.T01:exon 15.0%
!!! ATTAAGTTGTTTATTCAAAT+AGG + Chr6:25146775-25146794 MsG0680031713.01.T01:intron 15.0%
!!! ATTTCATGTTCTATATTTTT+TGG + Chr6:25142975-25142994 MsG0680031713.01.T01:intron 15.0%
!!! GAACATTTAGAATTTTTTTA+AGG - Chr6:25147882-25147901 None:intergenic 15.0%
!!! TAAGCAAAAATTTACATTTT+AGG - Chr6:25147810-25147829 None:intergenic 15.0%
!!! TCTAAACAATTTTTTTTTAC+AGG - Chr6:25143433-25143452 None:intergenic 15.0%
!!! TTAAGTTGTTTATTCAAATA+GGG + Chr6:25146776-25146795 MsG0680031713.01.T01:intron 15.0%
!!! TTTCATGTTCTATATTTTTT+GGG + Chr6:25142976-25142995 MsG0680031713.01.T01:intron 15.0%
!! AAAAAAATTCTAAATGTTCC+AGG + Chr6:25147883-25147902 MsG0680031713.01.T01:intron 20.0%
!! AAATTATTGTGTATGTTTGA+TGG - Chr6:25147336-25147355 None:intergenic 20.0%
!! ACAATATAAGATATAAACGA+GGG - Chr6:25147367-25147386 None:intergenic 20.0%
!! AGAAAAGAAAAAAGCTATAT+TGG - Chr6:25146318-25146337 None:intergenic 20.0%
!! ATTAACTAAAGAGATATTTG+AGG + Chr6:25144066-25144085 MsG0680031713.01.T01:intron 20.0%
!! TCAAAATATACATTAATCGA+TGG - Chr6:25149393-25149412 None:intergenic 20.0%
!! TCGTTTATATCTTATATTGT+GGG + Chr6:25147367-25147386 MsG0680031713.01.T01:intron 20.0%
!! TTCAACAATTCATAAACTTA+CGG - Chr6:25142703-25142722 None:intergenic 20.0%
!!! AAATTCGACAAATTTTTGAA+TGG - Chr6:25144387-25144406 None:intergenic 20.0%
!!! AGTATAATTTGTTGTATCAT+TGG + Chr6:25143707-25143726 MsG0680031713.01.T01:intron 20.0%
!!! ATAGATATAATTTTGCAGTT+TGG - Chr6:25145814-25145833 None:intergenic 20.0%
!!! CAATTCATTGTTATTATAGT+TGG - Chr6:25143793-25143812 None:intergenic 20.0%
!!! GTTTGCAATTTTAATACATT+CGG - Chr6:25143966-25143985 None:intergenic 20.0%
! AAAAATCAATCTTCTTTCCT+TGG - Chr6:25144886-25144905 None:intergenic 25.0%
! AAAATCAATCTTCTTTCCTT+GGG - Chr6:25144885-25144904 None:intergenic 25.0%
! AAATTCGCTCAAATTACATA+GGG + Chr6:25143540-25143559 MsG0680031713.01.T01:intron 25.0%
! AAGAATGTTATCTGAATTGT+TGG + Chr6:25145470-25145489 MsG0680031713.01.T01:intron 25.0%
! ACAAATTATACTTCTACGAT+CGG - Chr6:25143699-25143718 None:intergenic 25.0%
! AGAACTTAAGTTCAATTCTT+AGG + Chr6:25144143-25144162 MsG0680031713.01.T01:intron 25.0%
! AGTAGTTCATACATCATATA+AGG + Chr6:25145256-25145275 MsG0680031713.01.T01:intron 25.0%
! ATTGAATTGAACGACAAAAA+GGG - Chr6:25146126-25146145 None:intergenic 25.0%
! ATTGCAGTTAAATCTCTATT+AGG - Chr6:25145166-25145185 None:intergenic 25.0%
! CAAAAAGGAAAAGGATTATT+CGG + Chr6:25146932-25146951 MsG0680031713.01.T01:intron 25.0%
! CAAAGAATCTTCAAATTACA+GGG - Chr6:25143462-25143481 None:intergenic 25.0%
! CACAATATAAGATATAAACG+AGG - Chr6:25147368-25147387 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - Chr6:25147785-25147804 None:intergenic 25.0%
! CCTAAAATTGCAATTTAAGA+CGG - Chr6:25148803-25148822 None:intergenic 25.0%
! CTCGTTTATATCTTATATTG+TGG + Chr6:25147366-25147385 MsG0680031713.01.T01:intron 25.0%
! GAATCGTTCTTTATATTCAT+TGG - Chr6:25146816-25146835 None:intergenic 25.0%
! GAGATAAGATGTTTATAGAA+AGG + Chr6:25145140-25145159 MsG0680031713.01.T01:intron 25.0%
! TACAGAAAACAAAAAGGAAA+AGG + Chr6:25146923-25146942 MsG0680031713.01.T01:intron 25.0%
! TACATCAGTAAATTACAATG+AGG - Chr6:25146469-25146488 None:intergenic 25.0%
! TATGTCACTAAAAGCTAATA+AGG + Chr6:25148016-25148035 MsG0680031713.01.T01:CDS 25.0%
! TCCATGTCATTATATTCATT+CGG - Chr6:25149022-25149041 None:intergenic 25.0%
! TCTATTCTACTTCTATACAA+AGG + Chr6:25146427-25146446 MsG0680031713.01.T01:intron 25.0%
! TCTTGATATAGTTTCATGTA+TGG + Chr6:25148650-25148669 MsG0680031713.01.T01:intron 25.0%
! TGACAAGAATGTAGATAATT+TGG - Chr6:25146098-25146117 None:intergenic 25.0%
! TGCATTATTCAATTTACAAG+AGG + Chr6:25146365-25146384 MsG0680031713.01.T01:intron 25.0%
! TGGATACTTATTTCATATGT+TGG - Chr6:25143773-25143792 None:intergenic 25.0%
! TTTCAAAATAGTCATTTCGT+TGG + Chr6:25143032-25143051 MsG0680031713.01.T01:intron 25.0%
!! ACTGATTGTAGAAGTATAAA+GGG + Chr6:25143352-25143371 MsG0680031713.01.T01:intron 25.0%
!! AGCATTACATTTTCATACTT+CGG - Chr6:25148757-25148776 None:intergenic 25.0%
!! ATTTTCTAGATCTCTAGATT+TGG - Chr6:25145996-25146015 None:intergenic 25.0%
!! CAAAACTCTATTTGATAATC+TGG - Chr6:25145330-25145349 None:intergenic 25.0%
!! CGTCTTAAATTGCAATTTTA+GGG + Chr6:25148801-25148820 MsG0680031713.01.T01:intron 25.0%
!! CTTGATTTCATTTTACATAC+AGG + Chr6:25149101-25149120 MsG0680031713.01.T01:intron 25.0%
!! GTTTTTGTTAAGAGAAGAAA+TGG - Chr6:25146545-25146564 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - Chr6:25147711-25147730 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr6:25147820-25147839 MsG0680031713.01.T01:intron 25.0%
!!! AAGAGATGCTTATTTTGAAA+GGG - Chr6:25148434-25148453 None:intergenic 25.0%
!!! AAGTAATTTTGATCCTTCAT+AGG - Chr6:25149211-25149230 None:intergenic 25.0%
!!! CAGAATGATGTTTTAAAGAT+CGG - Chr6:25149068-25149087 None:intergenic 25.0%
!!! GCTAACTAGTATTTTAAGAT+CGG - Chr6:25144322-25144341 None:intergenic 25.0%
!!! TAAGAGATGCTTATTTTGAA+AGG - Chr6:25148435-25148454 None:intergenic 25.0%
!!! TTAAATTGCAATTTTAGGGA+TGG + Chr6:25148805-25148824 MsG0680031713.01.T01:intron 25.0%
!!! TTCCTTTTTGTTTTCTGTAT+TGG - Chr6:25146922-25146941 None:intergenic 25.0%
AAAACACTCTTATGTATCAC+TGG - Chr6:25146512-25146531 None:intergenic 30.0%
AAATAACATCCTTCGCTTTA+AGG - Chr6:25145302-25145321 None:intergenic 30.0%
AATGAGTGAAAAAACAAACC+AGG - Chr6:25142921-25142940 None:intergenic 30.0%
ACAAAAACCGCTAATATTAC+AGG - Chr6:25143393-25143412 None:intergenic 30.0%
ACATTAAGAGACTATATCGA+TGG + Chr6:25144284-25144303 MsG0680031713.01.T01:intron 30.0%
ACTCAAAAGTCTAACCTTAA+AGG - Chr6:25147464-25147483 None:intergenic 30.0%
AGAAACCGCTAATATTACAT+GGG + Chr6:25143602-25143621 MsG0680031713.01.T01:intron 30.0%
ATAACATTCTTCAGCAAGAA+AGG - Chr6:25145461-25145480 None:intergenic 30.0%
ATCAAACCTATAAACATACC+TGG + Chr6:25147617-25147636 MsG0680031713.01.T01:intron 30.0%
ATGAGTGAAAAAACAAACCA+GGG - Chr6:25142920-25142939 None:intergenic 30.0%
ATGTTATCTGAATTGTTGGT+TGG + Chr6:25145474-25145493 MsG0680031713.01.T01:intron 30.0%
ATTCATTGGTGCATTTGTTT+AGG - Chr6:25146802-25146821 None:intergenic 30.0%
CAAAAACCGCTAATATTACA+GGG - Chr6:25143392-25143411 None:intergenic 30.0%
CACCAATACAGAAAACAAAA+AGG + Chr6:25146917-25146936 MsG0680031713.01.T01:intron 30.0%
CATCTCTTATATCATCAACT+TGG + Chr6:25148446-25148465 MsG0680031713.01.T01:intron 30.0%
CATGTATCATTAACAACAGA+TGG + Chr6:25145434-25145453 MsG0680031713.01.T01:intron 30.0%
CCAAAGAATCTTCAAATTAC+AGG - Chr6:25143463-25143482 None:intergenic 30.0%
CCATGTCATTATATTCATTC+GGG - Chr6:25149021-25149040 None:intergenic 30.0%
CCTGTAATTTGAAGATTCTT+TGG + Chr6:25143460-25143479 MsG0680031713.01.T01:intron 30.0%
CGAGTTATATGTCTACATTA+TGG - Chr6:25147547-25147566 None:intergenic 30.0%
CTTTATACTTCTACAATCAG+TGG - Chr6:25143353-25143372 None:intergenic 30.0%
GAAATTCGCTCAAATTACAT+AGG + Chr6:25143539-25143558 MsG0680031713.01.T01:intron 30.0%
GACTACTCATCACATATTTA+GGG + Chr6:25143243-25143262 MsG0680031713.01.T01:intron 30.0%
GATATAGTTTCATGTATGGA+AGG + Chr6:25148654-25148673 MsG0680031713.01.T01:intron 30.0%
GATTGAATTGAACGACAAAA+AGG - Chr6:25146127-25146146 None:intergenic 30.0%
GCTTAACACAGTTCAATAAA+TGG - Chr6:25144344-25144363 None:intergenic 30.0%
GTCTTACAGAAACTACATTA+AGG + Chr6:25147259-25147278 MsG0680031713.01.T01:intron 30.0%
GTTCTGCAATATTAAGTCAA+AGG + Chr6:25146269-25146288 MsG0680031713.01.T01:intron 30.0%
GTTGTTATCATAAGCTATCA+TGG - Chr6:25146698-25146717 None:intergenic 30.0%
TAGAAACCGCTAATATTACA+TGG + Chr6:25143601-25143620 MsG0680031713.01.T01:intron 30.0%
TATGCTAGAGATTACAAAAG+AGG + Chr6:25149143-25149162 MsG0680031713.01.T01:CDS 30.0%
TGACTACTCATCACATATTT+AGG + Chr6:25143242-25143261 MsG0680031713.01.T01:intron 30.0%
TGATGTATGAACTACTTTAG+AGG - Chr6:25145252-25145271 None:intergenic 30.0%
TGTACTGTCAAAATTCATGA+AGG - Chr6:25143493-25143512 None:intergenic 30.0%
TGTCAAATTGAGTTTCATGT+TGG + Chr6:25145736-25145755 MsG0680031713.01.T01:intron 30.0%
TGTTTACCCTGTAATATTAG+CGG + Chr6:25143383-25143402 MsG0680031713.01.T01:intron 30.0%
TTAACCCCATGTAATATTAG+CGG - Chr6:25143610-25143629 None:intergenic 30.0%
TTATTGCATCACTTTACCAA+AGG - Chr6:25146159-25146178 None:intergenic 30.0%
TTGAGCACAGATTAATACTT+GGG - Chr6:25143668-25143687 None:intergenic 30.0%
! AGTACATAGTTTGTATATGG+CGG + Chr6:25143507-25143526 MsG0680031713.01.T01:intron 30.0%
! ATTTGAAGATTCTTTGGTTC+TGG + Chr6:25143466-25143485 MsG0680031713.01.T01:intron 30.0%
! CACTGATTGTAGAAGTATAA+AGG + Chr6:25143351-25143370 MsG0680031713.01.T01:intron 30.0%
! CCGTCTTAAATTGCAATTTT+AGG + Chr6:25148800-25148819 MsG0680031713.01.T01:intron 30.0%
! CTTTGTTTGAGAATTAAGAG+AGG - Chr6:25147240-25147259 None:intergenic 30.0%
! GACAGTACATAGTTTGTATA+TGG + Chr6:25143504-25143523 MsG0680031713.01.T01:intron 30.0%
! GACTATTTTCTGTTAGGTTT+TGG - Chr6:25145974-25145993 None:intergenic 30.0%
! GATATAATTTTGCAGTTTGG+CGG - Chr6:25145811-25145830 None:intergenic 30.0%
! GATTCTCTTTTCTTTGTTGA+AGG + Chr6:25148223-25148242 MsG0680031713.01.T01:CDS 30.0%
! GATTTGGACTATTTTCTGTT+AGG - Chr6:25145980-25145999 None:intergenic 30.0%
! GCATTACATTTTCATACTTC+GGG - Chr6:25148756-25148775 None:intergenic 30.0%
! TACGGCTTCAATTTTTGTTA+TGG - Chr6:25142685-25142704 None:intergenic 30.0%
! TCACAATTTGCAAGCTTTTA+TGG - Chr6:25143819-25143838 None:intergenic 30.0%
! TTTGAAACAAATTCACCAGT+AGG + Chr6:25148680-25148699 MsG0680031713.01.T01:intron 30.0%
! TTTTCTTTTCTTCCACAGAT+TGG + Chr6:25144845-25144864 MsG0680031713.01.T01:intron 30.0%
!! ATACTTGTTTTCCCATTACT+GGG - Chr6:25143906-25143925 None:intergenic 30.0%
!! ATAGCTGGTCTATAATTTTC+AGG + Chr6:25144514-25144533 MsG0680031713.01.T01:intron 30.0%
!! CTCTTTGGTTTGTAGTTATA+GGG + Chr6:25144002-25144021 MsG0680031713.01.T01:intron 30.0%
!! GTGTCTTGTTTATGATTCTT+GGG - Chr6:25142763-25142782 None:intergenic 30.0%
!! TAATAAGGAAGAAAGCATTC+TGG + Chr6:25147578-25147597 MsG0680031713.01.T01:intron 30.0%
!! TTGTGTATGTTTGATGGTTT+TGG - Chr6:25147330-25147349 None:intergenic 30.0%
!!! AGATTTTTTGGAGGGAAATT+AGG - Chr6:25147172-25147191 None:intergenic 30.0%
!!! GACGATTTTGAAACTCTAAT+CGG + Chr6:25144964-25144983 MsG0680031713.01.T01:intron 30.0%
!!! TAGGTTTTGAAAGCTTCAAA+GGG - Chr6:25148588-25148607 None:intergenic 30.0%
!!! TCAGCGACTATTTTGAAATT+TGG + Chr6:25143208-25143227 MsG0680031713.01.T01:intron 30.0%
!!! TTTTTTGGGATAGTGTAACA+AGG + Chr6:25142990-25143009 MsG0680031713.01.T01:intron 30.0%
AAAGGGCAAAGTGACAATAA+AGG - Chr6:25148417-25148436 None:intergenic 35.0%
AATGCTATCTTCAATGCATG+AGG + Chr6:25148771-25148790 MsG0680031713.01.T01:intron 35.0%
AATTATACTTCTACGATCGG+TGG - Chr6:25143696-25143715 None:intergenic 35.0%
AATTGTGATTGCACCAAGTT+TGG + Chr6:25147030-25147049 MsG0680031713.01.T01:intron 35.0%
ACAATGCATAGACTTCTAAC+TGG - Chr6:25147513-25147532 None:intergenic 35.0%
ACTATAAAGAGAGATGTCGA+TGG - Chr6:25146341-25146360 None:intergenic 35.0%
AGAATATGCCATAGTTCATG+TGG + Chr6:25144663-25144682 MsG0680031713.01.T01:intron 35.0%
AGAATTAAGAGAGGAATGCA+AGG - Chr6:25147231-25147250 None:intergenic 35.0%
AGAGAATCTATGTTCGACTT+TGG - Chr6:25148211-25148230 None:intergenic 35.0%
AGTGTTTATTCTCTGTCCTA+AGG + Chr6:25146395-25146414 MsG0680031713.01.T01:intron 35.0%
AGTTTCATGTTGGAACAGAA+AGG + Chr6:25145746-25145765 MsG0680031713.01.T01:intron 35.0%
ATAATCCTTCCCATGAGATT+CGG + Chr6:25144214-25144233 MsG0680031713.01.T01:intron 35.0%
ATAATTATTAATCCGTGCCC+AGG + Chr6:25143323-25143342 MsG0680031713.01.T01:intron 35.0%
ATGAGAACAACCTTCCTTAT+GGG - Chr6:25148714-25148733 None:intergenic 35.0%
ATGCTATCTTCAATGCATGA+GGG + Chr6:25148772-25148791 MsG0680031713.01.T01:intron 35.0%
ATTAAAAAACATATGGGCGC+AGG - Chr6:25147656-25147675 None:intergenic 35.0%
ATTAAAACAGCACAAGACAC+TGG + Chr6:25142791-25142810 MsG0680031713.01.T01:CDS 35.0%
CAAAAGTCTAACCTTAAAGG+AGG - Chr6:25147461-25147480 None:intergenic 35.0%
CAAGTATTAATCTGTGCTCA+AGG + Chr6:25143667-25143686 MsG0680031713.01.T01:intron 35.0%
CATCTTCAATACCCAGTAAT+GGG + Chr6:25143892-25143911 MsG0680031713.01.T01:intron 35.0%
CATTGTAAAGCCAAAGAATG+AGG - Chr6:25144933-25144952 None:intergenic 35.0%
CCCGAATGAATATAATGACA+TGG + Chr6:25149018-25149037 MsG0680031713.01.T01:intron 35.0%
CCTATAACTACAAACCAAAG+AGG - Chr6:25144004-25144023 None:intergenic 35.0%
CTAAGCGTTATCAAAAACTG+AGG - Chr6:25145949-25145968 None:intergenic 35.0%
CTCGTAACTGTGATGTAATA+AGG + Chr6:25147563-25147582 MsG0680031713.01.T01:intron 35.0%
CTTACGTTATGAATGTTAGC+CGG - Chr6:25148379-25148398 None:intergenic 35.0%
CTTCTATACAAAGGACTCTA+TGG + Chr6:25146436-25146455 MsG0680031713.01.T01:intron 35.0%
CTTCTGAACAATTTGTGCTT+TGG - Chr6:25144125-25144144 None:intergenic 35.0%
CTTGAGCACAGATTAATACT+TGG - Chr6:25143669-25143688 None:intergenic 35.0%
GAAACCGCTAATATTACATG+GGG + Chr6:25143603-25143622 MsG0680031713.01.T01:intron 35.0%
GAAATTAGGAGATGAATGCA+GGG - Chr6:25147158-25147177 None:intergenic 35.0%
GAATCTTCAAATTACAGGGT+TGG - Chr6:25143458-25143477 None:intergenic 35.0%
GCAATTCTTGAATCCAAACT+TGG - Chr6:25147046-25147065 None:intergenic 35.0%
GCTAACATTCATAACGTAAG+TGG + Chr6:25148379-25148398 MsG0680031713.01.T01:intron 35.0%
GTGCTATGTAAGTTTATAGC+TGG + Chr6:25144499-25144518 MsG0680031713.01.T01:intron 35.0%
TAAGGTCCAGGTATGTTTAT+AGG - Chr6:25147626-25147645 None:intergenic 35.0%
TAATTATTAATCCGTGCCCA+GGG + Chr6:25143324-25143343 MsG0680031713.01.T01:intron 35.0%
TACTTGAGAATAATGATGCG+AGG + Chr6:25145683-25145702 MsG0680031713.01.T01:intron 35.0%
TCATCTTCAATACCCAGTAA+TGG + Chr6:25143891-25143910 MsG0680031713.01.T01:intron 35.0%
TGACATAAGAAATCCAGAGA+AGG - Chr6:25148003-25148022 None:intergenic 35.0%
TGGAGAGGAAAATAACATGA+AGG - Chr6:25146046-25146065 None:intergenic 35.0%
TTAGAAGTCTATGCATTGTG+TGG + Chr6:25147514-25147533 MsG0680031713.01.T01:intron 35.0%
TTCAACGTCTTCAACCAATT+GGG - Chr6:25144558-25144577 None:intergenic 35.0%
TTGTAGAAGTTTCTCAACTC+TGG - Chr6:25147293-25147312 None:intergenic 35.0%
! ACACGATGTGTTTGGATTTT+CGG - Chr6:25143745-25143764 None:intergenic 35.0%
! ATATGAACAAAAGAGCGCAA+AGG - Chr6:25147071-25147090 None:intergenic 35.0%
! CTCTCTGGGGAAAAAAAAAA+TGG + Chr6:25148521-25148540 MsG0680031713.01.T01:intron 35.0%
! GTGTCGAATCTCTTGATTTT+TGG - Chr6:25146967-25146986 None:intergenic 35.0%
! GTTTTCTGTTAAGCAGTTGT+CGG + Chr6:25142856-25142875 MsG0680031713.01.T01:CDS 35.0%
! TATGAACAAAAGAGCGCAAA+GGG - Chr6:25147070-25147089 None:intergenic 35.0%
! TTTTATGCAAGACAGTGTCT+AGG - Chr6:25149347-25149366 None:intergenic 35.0%
! TTTTCTTCCACAGATTGGAT+TGG + Chr6:25144850-25144869 MsG0680031713.01.T01:intron 35.0%
!! CCTCTTTGGTTTGTAGTTAT+AGG + Chr6:25144001-25144020 MsG0680031713.01.T01:intron 35.0%
!! GAAGATTGATTTTTCTCAGC+AGG + Chr6:25144892-25144911 MsG0680031713.01.T01:CDS 35.0%
!! GATACTTGTTTTCCCATTAC+TGG - Chr6:25143907-25143926 None:intergenic 35.0%
!! GGTGTCTTGTTTATGATTCT+TGG - Chr6:25142764-25142783 None:intergenic 35.0%
!! GTCTTACACTTTGCTGTTAA+CGG + Chr6:25142815-25142834 MsG0680031713.01.T01:CDS 35.0%
!!! CTAGGTTTTGAAAGCTTCAA+AGG - Chr6:25148589-25148608 None:intergenic 35.0%
!!! TGTGCTGTTTTAATCAGTTG+TGG - Chr6:25142785-25142804 None:intergenic 35.0%
AAACCAACCAACAAACTAGC+CGG - Chr6:25148898-25148917 None:intergenic 40.0%
ACCATCGTATGTTCAAAGAG+CGG - Chr6:25146192-25146211 None:intergenic 40.0%
ACGGAGTTTCTGAACAAGAT+TGG + Chr6:25142834-25142853 MsG0680031713.01.T01:CDS 40.0%
AGAATAAGCGAACTGCATTC+TGG - Chr6:25149188-25149207 None:intergenic 40.0%
AGATATAAACGAGGGTTTCG+AGG - Chr6:25147359-25147378 None:intergenic 40.0%
AGTAGGTTTCTTTCCCCATA+AGG + Chr6:25148697-25148716 MsG0680031713.01.T01:intron 40.0%
ATAAGCTATCATGGAGAGCA+TGG - Chr6:25146689-25146708 None:intergenic 40.0%
ATGGTAATTGATACACCCTC+CGG + Chr6:25147689-25147708 MsG0680031713.01.T01:intron 40.0%
ATGTGCAGCTGTCTCTTTAT+GGG + Chr6:25146227-25146246 MsG0680031713.01.T01:intron 40.0%
ATTAAGAGAGGAATGCAAGG+AGG - Chr6:25147228-25147247 None:intergenic 40.0%
CAAAAAATCTCTCCCGGATA+TGG + Chr6:25147182-25147201 MsG0680031713.01.T01:intron 40.0%
CAAAGGAAGGAAGAACAGAA+GGG - Chr6:25142889-25142908 None:intergenic 40.0%
CAATACTTCAACCTGCATAG+AGG - Chr6:25145519-25145538 None:intergenic 40.0%
CAATTGGTTGAAGACGTTGA+AGG + Chr6:25144557-25144576 MsG0680031713.01.T01:CDS 40.0%
CATCACTTTACCAAAGGAAC+GGG - Chr6:25146153-25146172 None:intergenic 40.0%
CATGAGAACAACCTTCCTTA+TGG - Chr6:25148715-25148734 None:intergenic 40.0%
CTATTTAGGTCTCTTCCGAT+AGG + Chr6:25148152-25148171 MsG0680031713.01.T01:intron 40.0%
CTGAACCTAGGTAAGAATGA+AGG - Chr6:25147938-25147957 None:intergenic 40.0%
CTGATAATATCTACACCCTC+CGG - Chr6:25147842-25147861 None:intergenic 40.0%
CTTCAACGTCTTCAACCAAT+TGG - Chr6:25144559-25144578 None:intergenic 40.0%
GAATAGATTCAACGCACCTT+AGG - Chr6:25146414-25146433 None:intergenic 40.0%
GAATCTCATGGGAAGGATTA+TGG - Chr6:25144215-25144234 None:intergenic 40.0%
GAGGCTTAGGATGTAAAACT+CGG - Chr6:25147442-25147461 None:intergenic 40.0%
GCATCACTTTACCAAAGGAA+CGG - Chr6:25146154-25146173 None:intergenic 40.0%
GGAAATTAGGAGATGAATGC+AGG - Chr6:25147159-25147178 None:intergenic 40.0%
GTACATTGTGTTCGTGCTTA+CGG + Chr6:25145584-25145603 MsG0680031713.01.T01:CDS 40.0%
GTGAAAAAACAAACCAGGGA+TGG - Chr6:25142916-25142935 None:intergenic 40.0%
GTTCGCTTATTCTCCTATGA+AGG + Chr6:25149195-25149214 MsG0680031713.01.T01:CDS 40.0%
GTTGTCCTTCATTCTTACCT+AGG + Chr6:25147930-25147949 MsG0680031713.01.T01:CDS 40.0%
TAATCCTTCCCATGAGATTC+GGG + Chr6:25144215-25144234 MsG0680031713.01.T01:intron 40.0%
TAATGACATGGAAGTCTCAC+TGG + Chr6:25149030-25149049 MsG0680031713.01.T01:intron 40.0%
TACATCCTAAGCCTCCTTTA+AGG + Chr6:25147447-25147466 MsG0680031713.01.T01:intron 40.0%
TCAACGTCTTCAACCAATTG+GGG - Chr6:25144557-25144576 None:intergenic 40.0%
TCATGTTGGAACAGAAAGGA+GGG + Chr6:25145750-25145769 MsG0680031713.01.T01:intron 40.0%
TCTAAATGTTCCAGGTCTGT+GGG + Chr6:25147891-25147910 MsG0680031713.01.T01:intron 40.0%
TCTAACCTTAAAGGAGGCTT+AGG - Chr6:25147455-25147474 None:intergenic 40.0%
TCTCTTGACAATGTGCTTCA+TGG + Chr6:25148253-25148272 MsG0680031713.01.T01:CDS 40.0%
TGAGAACAACCTTCCTTATG+GGG - Chr6:25148713-25148732 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr6:25147707-25147726 None:intergenic 40.0%
TGCTTATATTAGTGACCGGA+GGG + Chr6:25147824-25147843 MsG0680031713.01.T01:intron 40.0%
TGTCTCCAACAACATCCTAT+CGG - Chr6:25148170-25148189 None:intergenic 40.0%
TTAAGAGAGGAATGCAAGGA+GGG - Chr6:25147227-25147246 None:intergenic 40.0%
TTATGGGGAAAGAAACCTAC+TGG - Chr6:25148698-25148717 None:intergenic 40.0%
TTCAATCAAACCCGTTCCTT+TGG + Chr6:25146140-25146159 MsG0680031713.01.T01:intron 40.0%
TTCATGTTGGAACAGAAAGG+AGG + Chr6:25145749-25145768 MsG0680031713.01.T01:intron 40.0%
TTCTAAATGTTCCAGGTCTG+TGG + Chr6:25147890-25147909 MsG0680031713.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr6:25147708-25147727 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + Chr6:25147823-25147842 MsG0680031713.01.T01:intron 40.0%
! ACATAGTTTGTATATGGCGG+AGG + Chr6:25143510-25143529 MsG0680031713.01.T01:intron 40.0%
! GGTGCAATCACAATTTGCTT+CGG - Chr6:25147025-25147044 None:intergenic 40.0%
! GTAACATCGAAGCATCAGTT+AGG - Chr6:25148336-25148355 None:intergenic 40.0%
! GTGCAATCACAATTTGCTTC+GGG - Chr6:25147024-25147043 None:intergenic 40.0%
! GTTCCTGAGTTTTCAAAGCT+TGG + Chr6:25147966-25147985 MsG0680031713.01.T01:CDS 40.0%
! TAAGCTATCATGGAGAGCAT+GGG - Chr6:25146688-25146707 None:intergenic 40.0%
! TGGATTAGACACGATGTGTT+TGG - Chr6:25143753-25143772 None:intergenic 40.0%
! TTAGTTTGAGCTTGCTCTCT+GGG + Chr6:25148507-25148526 MsG0680031713.01.T01:intron 40.0%
! TTCCTCTCCATTCTTTTCCA+CGG + Chr6:25146056-25146075 MsG0680031713.01.T01:intron 40.0%
!! ATCCTTCGCTTTAAGGTCAT+GGG - Chr6:25145295-25145314 None:intergenic 40.0%
!! CTATGCAGGTTGAAGTATTG+AGG + Chr6:25145519-25145538 MsG0680031713.01.T01:intron 40.0%
!! GGTGCTTATTTTTCCTTCTC+TGG + Chr6:25147987-25148006 MsG0680031713.01.T01:CDS 40.0%
!!! CATATCCGGGAGAGATTTTT+TGG - Chr6:25147184-25147203 None:intergenic 40.0%
!!! TTTTCAGGTATGTTGCAGAG+AGG + Chr6:25144529-25144548 MsG0680031713.01.T01:intron 40.0%
AAGCACTTGCGAGACTGTTT+GGG + Chr6:25146610-25146629 MsG0680031713.01.T01:intron 45.0%
AATCTCTCCCGGATATGGTT+TGG + Chr6:25147187-25147206 MsG0680031713.01.T01:intron 45.0%
AATGCAAGGAGGGAAAGGAA+GGG - Chr6:25147217-25147236 None:intergenic 45.0%
ACCAAGCGATGAAGTTCAAG+TGG + Chr6:25144092-25144111 MsG0680031713.01.T01:intron 45.0%
ACCACTTGAACTTCATCGCT+TGG - Chr6:25144096-25144115 None:intergenic 45.0%
ACCGCTCTTTGAACATACGA+TGG + Chr6:25146188-25146207 MsG0680031713.01.T01:intron 45.0%
AGACAGCTGCACATCATAAG+AGG - Chr6:25146221-25146240 None:intergenic 45.0%
AGATGAATGCAGGGAGGAAA+AGG - Chr6:25147149-25147168 None:intergenic 45.0%
ATCTCTCCCGGATATGGTTT+GGG + Chr6:25147188-25147207 MsG0680031713.01.T01:intron 45.0%
ATGGGCGCAGGAAAATTGTA+AGG - Chr6:25147644-25147663 None:intergenic 45.0%
ATTAGGAGATGAATGCAGGG+AGG - Chr6:25147155-25147174 None:intergenic 45.0%
CATGTTGGAACAGAAAGGAG+GGG + Chr6:25145751-25145770 MsG0680031713.01.T01:intron 45.0%
CCAAAGGAAGGAAGAACAGA+AGG - Chr6:25142890-25142909 None:intergenic 45.0%
CCTTCTGTTCTTCCTTCCTT+TGG + Chr6:25142887-25142906 MsG0680031713.01.T01:CDS 45.0%
CCTTTGTCCAATCCAATCTG+TGG - Chr6:25144860-25144879 None:intergenic 45.0%
CGAACACAATGTACAGATGC+TGG - Chr6:25145578-25145597 None:intergenic 45.0%
CGTTATGAATGTTAGCCGGA+TGG - Chr6:25148375-25148394 None:intergenic 45.0%
CTCTTCCGATAGGATGTTGT+TGG + Chr6:25148162-25148181 MsG0680031713.01.T01:CDS 45.0%
GAAGGATACACTCAACCATC+CGG + Chr6:25148357-25148376 MsG0680031713.01.T01:CDS 45.0%
GAGAGCAAGCTCAAACTAAG+AGG - Chr6:25148506-25148525 None:intergenic 45.0%
GATGTGCAGCTGTCTCTTTA+TGG + Chr6:25146226-25146245 MsG0680031713.01.T01:intron 45.0%
GCAGGAAAATTGTAAGGTCC+AGG - Chr6:25147638-25147657 None:intergenic 45.0%
GCTAACAGCTCCTCATTCTT+TGG + Chr6:25144920-25144939 MsG0680031713.01.T01:intron 45.0%
GGATGGTTGAGTGTATCCTT+CGG - Chr6:25148358-25148377 None:intergenic 45.0%
GGCGAAGAAAATGCTGAAGA+TGG + Chr6:25148037-25148056 MsG0680031713.01.T01:CDS 45.0%
GGGAGAAGAATCAGAAGTTG+AGG - Chr6:25148296-25148315 None:intergenic 45.0%
GGTTTCTTTCCCCATAAGGA+AGG + Chr6:25148701-25148720 MsG0680031713.01.T01:intron 45.0%
GTTCGACTTTGGTAGAGCAT+CGG - Chr6:25148200-25148219 None:intergenic 45.0%
GTTGATACGAACGTGCAATG+AGG - Chr6:25147094-25147113 None:intergenic 45.0%
TAAGCACTTGCGAGACTGTT+TGG + Chr6:25146609-25146628 MsG0680031713.01.T01:intron 45.0%
TACTTCAACCTGCATAGAGG+CGG - Chr6:25145516-25145535 None:intergenic 45.0%
TAGGACTTGGGACGAATTAG+CGG - Chr6:25148317-25148336 None:intergenic 45.0%
TATGCAAGACAGTGTCTAGG+TGG - Chr6:25149344-25149363 None:intergenic 45.0%
TATGCCATAGTTCATGTGGC+TGG + Chr6:25144667-25144686 MsG0680031713.01.T01:intron 45.0%
TCAAAGGAATGAGATGCGCA+AGG + Chr6:25146285-25146304 MsG0680031713.01.T01:intron 45.0%
TCCCTCCAAAAAATCTCTCC+CGG + Chr6:25147176-25147195 MsG0680031713.01.T01:intron 45.0%
TGAGATGCCGTGGAAAAGAA+TGG - Chr6:25146066-25146085 None:intergenic 45.0%
TGATGCTTCGATGTTACCGA+AGG + Chr6:25148339-25148358 MsG0680031713.01.T01:CDS 45.0%
TGTCTTAGTACGTGCCTCTT+TGG + Chr6:25143987-25144006 MsG0680031713.01.T01:intron 45.0%
TTAACCCTCCCGAATCTCAT+GGG - Chr6:25144226-25144245 None:intergenic 45.0%
TTACCTAGGTTCAGCAGAGA+TGG + Chr6:25147944-25147963 MsG0680031713.01.T01:CDS 45.0%
TTAGCCAGACTGCAATACGA+CGG - Chr6:25148926-25148945 None:intergenic 45.0%
! AAGCTATCATGGAGAGCATG+GGG - Chr6:25146687-25146706 None:intergenic 45.0%
! ACATGGAAGTCTCACTGGTT+TGG + Chr6:25149035-25149054 MsG0680031713.01.T01:intron 45.0%
! CCACAGATTGGATTGGACAA+AGG + Chr6:25144857-25144876 MsG0680031713.01.T01:intron 45.0%
! CGAAGCATCAGTTAGGACTT+GGG - Chr6:25148329-25148348 None:intergenic 45.0%
! CTTAGTTTGAGCTTGCTCTC+TGG + Chr6:25148506-25148525 MsG0680031713.01.T01:intron 45.0%
! GAAAGAAGTTTGAGATGCCG+TGG - Chr6:25146076-25146095 None:intergenic 45.0%
! TAGTTTGAGCTTGCTCTCTG+GGG + Chr6:25148508-25148527 MsG0680031713.01.T01:intron 45.0%
! TCGAAGCATCAGTTAGGACT+TGG - Chr6:25148330-25148349 None:intergenic 45.0%
! TTCGACTTTGGTAGAGCATC+GGG - Chr6:25148199-25148218 None:intergenic 45.0%
! TTGCAGTTTGGCGGATCTTA+TGG - Chr6:25145802-25145821 None:intergenic 45.0%
!! AAGTCTCACTGGTTTGGTCT+CGG + Chr6:25149041-25149060 MsG0680031713.01.T01:intron 45.0%
!! CATCCTTCGCTTTAAGGTCA+TGG - Chr6:25145296-25145315 None:intergenic 45.0%
!! GACACTGCGAGTTTTATCGA+TGG + Chr6:25146982-25147001 MsG0680031713.01.T01:intron 45.0%
!! GCACCAAGCTTTGAAAACTC+AGG - Chr6:25147972-25147991 None:intergenic 45.0%
!!! AGCGGTTTTTGTGTCGTTTC+TGG + Chr6:25143401-25143420 MsG0680031713.01.T01:intron 45.0%
!!! ATCCGGGAGAGATTTTTTGG+AGG - Chr6:25147181-25147200 None:intergenic 45.0%
!!! TCCGGGAGAGATTTTTTGGA+GGG - Chr6:25147180-25147199 None:intergenic 45.0%
!! AAAAGTAAATTTAAAAAAAT+GGG - Chr6:25148955-25148974 None:intergenic 5.0%
!! AATAATTATATTATATTAGA+CGG - Chr6:25143312-25143331 None:intergenic 5.0%
!! AATATATATAAATTATACTT+GGG - Chr6:25143643-25143662 None:intergenic 5.0%
!! TAAAAGTAAATTTAAAAAAA+TGG - Chr6:25148956-25148975 None:intergenic 5.0%
!! TAATATATATAAATTATACT+TGG - Chr6:25143644-25143663 None:intergenic 5.0%
!!! TTAAATATTTTTTTTTACAA+AGG + Chr6:25143573-25143592 MsG0680031713.01.T01:intron 5.0%
AAACCAGGGATGGAGACCAA+AGG - Chr6:25142906-25142925 None:intergenic 50.0%
ACTAGAAGCAGCTGAGAGCT+AGG - Chr6:25148607-25148626 None:intergenic 50.0%
AGAGGAATGCAAGGAGGGAA+AGG - Chr6:25147222-25147241 None:intergenic 50.0%
AGGACAACACCAGCAGGAAA+AGG - Chr6:25147918-25147937 None:intergenic 50.0%
AGGACTTGGGACGAATTAGC+GGG - Chr6:25148316-25148335 None:intergenic 50.0%
AGGGGATCCCAAACCATATC+CGG - Chr6:25147198-25147217 None:intergenic 50.0%
ATGCAAGGAGGGAAAGGAAG+GGG - Chr6:25147216-25147235 None:intergenic 50.0%
CTACAATCAGTGGTGACCCT+GGG - Chr6:25143343-25143362 None:intergenic 50.0%
GAACCATCTCTGCTGAACCT+AGG - Chr6:25147950-25147969 None:intergenic 50.0%
GAAGCCAGCCACATGAACTA+TGG - Chr6:25144674-25144693 None:intergenic 50.0%
GAATGAAGGACAACACCAGC+AGG - Chr6:25147924-25147943 None:intergenic 50.0%
GAATGCAAGGAGGGAAAGGA+AGG - Chr6:25147218-25147237 None:intergenic 50.0%
GGATTATGGCAGTACAGTCG+AGG - Chr6:25144201-25144220 None:intergenic 50.0%
GGATTGGACAAAGGATCCCA+AGG + Chr6:25144866-25144885 MsG0680031713.01.T01:CDS 50.0%
GTCCCATGACCTTAAAGCGA+AGG + Chr6:25145290-25145309 MsG0680031713.01.T01:intron 50.0%
GTTAACCCTCCCGAATCTCA+TGG - Chr6:25144227-25144246 None:intergenic 50.0%
TAGCCAGACTGCAATACGAC+GGG - Chr6:25148925-25148944 None:intergenic 50.0%
TCTACAATCAGTGGTGACCC+TGG - Chr6:25143344-25143363 None:intergenic 50.0%
TGCCGTGGAAAAGAATGGAG+AGG - Chr6:25146061-25146080 None:intergenic 50.0%
TTAAGACACCGCCTCTATGC+AGG + Chr6:25145505-25145524 MsG0680031713.01.T01:intron 50.0%
TTATGGCAGTACAGTCGAGG+AGG - Chr6:25144198-25144217 None:intergenic 50.0%
TTGGAACAGAAAGGAGGGGA+GGG + Chr6:25145755-25145774 MsG0680031713.01.T01:intron 50.0%
! CAACGAGTTGAACCGAGAAC+CGG + Chr6:25148876-25148895 MsG0680031713.01.T01:intron 50.0%
! CCAACAAACTAGCCGGTTCT+CGG - Chr6:25148891-25148910 None:intergenic 50.0%
! TCGCTGATTGTGCACTCTGT+TGG - Chr6:25143195-25143214 None:intergenic 50.0%
! TTGGCGGATCTTATGGTTCG+TGG - Chr6:25145795-25145814 None:intergenic 50.0%
!! GAACCGGCTAGTTTGTTGGT+TGG + Chr6:25148892-25148911 MsG0680031713.01.T01:intron 50.0%
!! TCGCTTTAAGGTCATGGGAC+TGG - Chr6:25145290-25145309 None:intergenic 50.0%
ACCTCTCCAACTGCAGCAGA+GGG - Chr6:25144600-25144619 None:intergenic 55.0%
AGCCAGACTGCAATACGACG+GGG - Chr6:25148924-25148943 None:intergenic 55.0%
AGGAAAAGGTCCCACAGACC+TGG - Chr6:25147904-25147923 None:intergenic 55.0%
CAGGGATGGAGACCAAAGGA+AGG - Chr6:25142902-25142921 None:intergenic 55.0%
CCTTCCCATGAGATTCGGGA+GGG + Chr6:25144219-25144238 MsG0680031713.01.T01:intron 55.0%
CTTCCTTTGGTCTCCATCCC+TGG + Chr6:25142900-25142919 MsG0680031713.01.T01:CDS 55.0%
GGGGATCCCAAACCATATCC+GGG - Chr6:25147197-25147216 None:intergenic 55.0%
GTTGGAACAGAAAGGAGGGG+AGG + Chr6:25145754-25145773 MsG0680031713.01.T01:intron 55.0%
TACCTCTCCAACTGCAGCAG+AGG - Chr6:25144601-25144620 None:intergenic 55.0%
TCCTTCCCATGAGATTCGGG+AGG + Chr6:25144218-25144237 MsG0680031713.01.T01:intron 55.0%
TCTACACCCTCTGCTGCAGT+TGG + Chr6:25144591-25144610 MsG0680031713.01.T01:CDS 55.0%
TTGCAGAGAGGAGCCCCAAT+TGG + Chr6:25144541-25144560 MsG0680031713.01.T01:CDS 55.0%
! TCTGTGGGACCTTTTCCTGC+TGG + Chr6:25147906-25147925 MsG0680031713.01.T01:CDS 55.0%
!! CCGAGAACCGGCTAGTTTGT+TGG + Chr6:25148888-25148907 MsG0680031713.01.T01:intron 55.0%
ACCCCCGTCGTATTGCAGTC+TGG + Chr6:25148919-25148938 MsG0680031713.01.T01:intron 60.0%
ACCCTCTGCTGCAGTTGGAG+AGG + Chr6:25144596-25144615 MsG0680031713.01.T01:CDS 60.0%
ATCAGTGGTGACCCTGGGCA+CGG - Chr6:25143338-25143357 None:intergenic 60.0%
CCCTCCCGAATCTCATGGGA+AGG - Chr6:25144222-25144241 None:intergenic 60.0%
GCCAGACTGCAATACGACGG+GGG - Chr6:25148923-25148942 None:intergenic 60.0%
! AGAAAGGAGGGGAGGGTGTG+TGG + Chr6:25145762-25145781 MsG0680031713.01.T01:intron 60.0%
! GAAAGGAGGGGAGGGTGTGT+GGG + Chr6:25145763-25145782 MsG0680031713.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 25142655 25149468 25142655 ID=MsG0680031713.01;Name=MsG0680031713.01
Chr6 mRNA 25142655 25149468 25142655 ID=MsG0680031713.01.T01;Parent=MsG0680031713.01;Name=MsG0680031713.01.T01;_AED=0.43;_eAED=0.43;_QI=67|1|1|1|1|1|7|229|312
Chr6 exon 25142655 25142921 25142655 ID=MsG0680031713.01.T01:exon:15427;Parent=MsG0680031713.01.T01
Chr6 exon 25144536 25144617 25144536 ID=MsG0680031713.01.T01:exon:15428;Parent=MsG0680031713.01.T01
Chr6 exon 25144863 25144913 25144863 ID=MsG0680031713.01.T01:exon:15429;Parent=MsG0680031713.01.T01
Chr6 exon 25145527 25145627 25145527 ID=MsG0680031713.01.T01:exon:15430;Parent=MsG0680031713.01.T01
Chr6 exon 25147905 25148058 25147905 ID=MsG0680031713.01.T01:exon:15431;Parent=MsG0680031713.01.T01
Chr6 exon 25148160 25148393 25148160 ID=MsG0680031713.01.T01:exon:15432;Parent=MsG0680031713.01.T01
Chr6 exon 25149123 25149468 25149123 ID=MsG0680031713.01.T01:exon:15433;Parent=MsG0680031713.01.T01
Chr6 five_prime_UTR 25142655 25142721 25142655 ID=MsG0680031713.01.T01:five_prime_utr;Parent=MsG0680031713.01.T01
Chr6 CDS 25142722 25142921 25142722 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25144536 25144617 25144536 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25144863 25144913 25144863 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25145527 25145627 25145527 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25147905 25148058 25147905 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25148160 25148393 25148160 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 CDS 25149123 25149239 25149123 ID=MsG0680031713.01.T01:cds;Parent=MsG0680031713.01.T01
Chr6 three_prime_UTR 25149240 25149468 25149240 ID=MsG0680031713.01.T01:three_prime_utr;Parent=MsG0680031713.01.T01
Gene Sequence

>MsG0680031713.01.T01

ATGATGAAACTGTTTGATGCACACTGTCATCTACAAGACCCAAGAATCATAAACAAGACACCACAACTGATTAAAACAGCACAAGACACTGGTGTCTTACACTTTGCTGTTAACGGAGTTTCTGAACAAGATTGGTTTTCTGTTAAGCAGTTGTCGGTTACTTACCCTTCTGTTCTTCCTTCCTTTGGTCTCCATCCCTGGTATGTTGCAGAGAGGAGCCCCAATTGGTTGAAGACGTTGAAGGAATATTTTGACTCTACACCCTCTGCTGCAGTTGGAGAGATTGGATTGGACAAAGGATCCCAAGGAAAGAAGATTGATTTTTCTCAGCAGGTTGAAGTATTGAGGCAGCAGCTTGAACTTGCTAAAGAGTTAAACAAGCCAGCATCTGTACATTGTGTTCGTGCTTACGGCGATCTTCTTGAGTTAATGAAGTCTGTGGGACCTTTTCCTGCTGGTGTTGTCCTTCATTCTTACCTAGGTTCAGCAGAGATGGTTCCTGAGTTTTCAAAGCTTGGTGCTTATTTTTCCTTCTCTGGATTTCTTATGTCACTAAAAGCTAATAAGGCGAAGAAAATGCTGAAGATGGTCTCTTCCGATAGGATGTTGTTGGAGACAGATGCACCCGATGCTCTACCAAAGTCGAACATAGATTCTCTTTTCTTTGTTGAAGGAGATACTTCTCTTGACAATGTGCTTCATGGACAAAGAACAACTTCATCCTCAACTTCTGATTCTTCTCCCGCTAATTCGTCCCAAGTCCTAACTGATGCTTCGATGTTACCGAAGGATACACTCAACCATCCGGCTAACATTCATAACGTACTTGATTATGTTGCATCTATGCTAGAGATTACAAAAGAGGAACTAGCTGAATTAAGTTACCAGAATGCAGTTCGCTTATTCTCCTATGAAGGATCAAAATTACTTCAAAAATAA

Protein sequence

>MsG0680031713.01.T01

MMKLFDAHCHLQDPRIINKTPQLIKTAQDTGVLHFAVNGVSEQDWFSVKQLSVTYPSVLPSFGLHPWYVAERSPNWLKTLKEYFDSTPSAAVGEIGLDKGSQGKKIDFSQQVEVLRQQLELAKELNKPASVHCVRAYGDLLELMKSVGPFPAGVVLHSYLGSAEMVPEFSKLGAYFSFSGFLMSLKANKAKKMLKMVSSDRMLLETDAPDALPKSNIDSLFFVEGDTSLDNVLHGQRTTSSSTSDSSPANSSQVLTDASMLPKDTLNHPANIHNVLDYVASMLEITKEELAELSYQNAVRLFSYEGSKLLQK*