AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023704.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023704.01.T01 MTR_8g099610 97.535 284 5 1 1 282 1 284 0.0 577
MsG0480023704.01.T01 MTR_4g019910 25.203 246 153 6 55 269 5 250 1.07e-18 83.6
MsG0480023704.01.T02 MTR_8g099615 95.000 140 7 0 1 140 1 140 7.68e-98 279
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023704.01.T01 AT4G10925 71.806 227 61 1 58 281 5 231 2.01e-123 352
MsG0480023704.01.T01 AT4G10925 71.806 227 61 1 58 281 5 231 2.01e-123 352
MsG0480023704.01.T01 AT4G10925 71.806 227 61 1 58 281 5 231 2.01e-123 352
MsG0480023704.01.T01 AT4G10925 71.806 227 61 1 58 281 5 231 2.01e-123 352
MsG0480023704.01.T01 AT4G10925 71.806 227 61 1 58 281 5 231 2.01e-123 352
MsG0480023704.01.T01 AT4G23960 53.476 187 84 2 86 271 1 185 5.71e-70 214
MsG0480023704.01.T01 AT4G23960 56.522 115 50 0 86 200 1 115 8.76e-45 148
MsG0480023704.01.T01 AT3G09250 29.661 118 78 2 157 269 109 226 8.27e-14 69.7
MsG0480023704.01.T01 AT3G09250 29.661 118 78 2 157 269 123 240 1.02e-13 69.7
MsG0480023704.01.T01 AT3G09250 29.091 110 73 2 157 261 109 218 9.31e-11 61.2
MsG0480023704.01.T02 AT5G42070 78.571 70 15 0 65 134 69 138 8.18e-36 122

Find 140 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTCCGGCGCCGGTTGTTT+TGG 0.166202 4:+88783993 MsG0480023704.01.T01:CDS
AGGGTTTCTAATTTCAAATT+AGG 0.182204 4:+88783720 MsG0480023704.01.T01:five_prime_UTR
TATCAATGTATTCGTAAAAT+AGG 0.190213 4:+88788935 MsG0480023704.01.T01:three_prime_UTR
GGATCAAGGATTGAACTTTC+AGG 0.239413 4:+88786317 MsG0480023704.01.T01:CDS
CTAAATTTGAAGAAAGAAAA+AGG 0.270867 4:-88783699 None:intergenic
CTTGTGATAGAGGGCTTTCC+AGG 0.271553 4:-88784160 None:intergenic
CCATGTACCACCGTCCATTA+TGG 0.285349 4:-88786446 None:intergenic
TACGCACGCGCTTAGTTACT+TGG 0.288672 4:+88784068 MsG0480023704.01.T01:CDS
ACTAGAATGCGCAACAAAAT+TGG 0.293813 4:-88786845 None:intergenic
GAGCAATCTGACAATAATAT+TGG 0.294064 4:-88786998 None:intergenic
CTCCCGCAACTGCGCAGCCT+TGG 0.302094 4:-88786804 None:intergenic
GGGTTTCTAATTTCAAATTA+GGG 0.317371 4:+88783721 MsG0480023704.01.T01:five_prime_UTR
AGAGCAGTTGTGGGCGTTGT+CGG 0.333014 4:+88783578 MsG0480023704.01.T01:five_prime_UTR
AGGATTGAACTTTCAGGTTC+GGG 0.333954 4:+88786323 MsG0480023704.01.T01:CDS
AACCAAGGCTGCGCAGTTGC+GGG 0.339397 4:+88786802 MsG0480023704.01.T01:three_prime_UTR
AAAGGCGTAAGAAATGAAAT+TGG 0.343295 4:-88783650 None:intergenic
AAAATATGCTGTAAGGATTC+TGG 0.343912 4:+88788898 MsG0480023704.01.T01:three_prime_UTR
TTTAAGAGATAAGTCCATTT+CGG 0.345349 4:+88785155 MsG0480023704.01.T01:CDS
GGCACCCTGCCCGAGTAAAA+AGG 0.347801 4:+88787120 MsG0480023704.01.T01:three_prime_UTR
AATCCATGTTGCAGGTATAA+TGG 0.361394 4:+88786261 MsG0480023704.01.T01:intron
TTATTAGTATATAAGAGTTT+AGG 0.370450 4:-88789117 None:intergenic
ATCAATGTATTCGTAAAATA+GGG 0.371971 4:+88788936 MsG0480023704.01.T01:three_prime_UTR
AAAACGACTCATTGCCGAAA+TGG 0.380664 4:-88785169 None:intergenic
AAGGATTGAACTTTCAGGTT+CGG 0.384282 4:+88786322 MsG0480023704.01.T01:CDS
GTTGGGAATGATAATTTGTT+AGG 0.388458 4:+88787047 MsG0480023704.01.T01:three_prime_UTR
GATTTAAGAAATATATTGTT+GGG 0.388714 4:+88787030 MsG0480023704.01.T01:three_prime_UTR
TGCCCCTCTTCCTTAACCCT+GGG 0.391184 4:-88788870 None:intergenic
TTGCCCCTCTTCCTTAACCC+TGG 0.391273 4:-88788871 None:intergenic
TTTCATACTGTATATAATAC+AGG 0.392345 4:+88786657 MsG0480023704.01.T01:three_prime_UTR
CAGTTGCAGTGCTTTGTTGA+CGG 0.395022 4:-88783904 None:intergenic
GAGCAGTTGTGGGCGTTGTC+GGG 0.403940 4:+88783579 MsG0480023704.01.T01:five_prime_UTR
GCTGGCAACTCATATTCAAC+TGG 0.404353 4:+88786295 MsG0480023704.01.T01:CDS
ATCACAGTTCTGTGATGAAT+GGG 0.405323 4:+88786475 MsG0480023704.01.T01:CDS
GATGATGGAGGAACTTGTTC+CGG 0.405418 4:+88784038 MsG0480023704.01.T01:CDS
AATTATTCACCTTGTGATAG+AGG 0.411656 4:-88784170 None:intergenic
GAGGAAGAAGGAAGGCATAA+TGG 0.418748 4:+88783552 None:intergenic
AGCCTTACGCATCAAAGAAT+TGG 0.419143 4:-88784121 None:intergenic
ACATATGTTGACATGGATAC+AGG 0.420220 4:+88786393 MsG0480023704.01.T01:CDS
CATTGAAAGACGACACAGAC+TGG 0.426183 4:-88784097 None:intergenic
GGGTACAACAGCGTCGGAAT+TGG 0.426525 4:-88783935 None:intergenic
CTCATATTCAACTGGGATCA+AGG 0.435870 4:+88786303 MsG0480023704.01.T01:CDS
TTGCCAGAAAAGTTATAACT+AGG 0.442413 4:+88786691 MsG0480023704.01.T01:three_prime_UTR
TGATTTAAGAAATATATTGT+TGG 0.451331 4:+88787029 MsG0480023704.01.T01:three_prime_UTR
TAACGGCGAGGAGGAAGGGT+TGG 0.452708 4:-88783807 None:intergenic
CATCACAGTTCTGTGATGAA+TGG 0.454850 4:+88786474 MsG0480023704.01.T01:CDS
ATTTATAAGACATTAAAACT+TGG 0.456223 4:-88783763 None:intergenic
GCAGAAGAAATGAGTGAAGT+TGG 0.456714 4:-88787426 None:intergenic
TGGCATCAAGTCTTAACTTA+AGG 0.458631 4:+88786765 MsG0480023704.01.T01:three_prime_UTR
AGGTTCGGGATGTACGTGCT+CGG 0.459745 4:+88786337 MsG0480023704.01.T01:CDS
TGATATATTATGTCTGATAC+TGG 0.461320 4:+88786539 MsG0480023704.01.T01:three_prime_UTR
AAGACATTGGTCACATTGAA+TGG 0.465463 4:-88786417 None:intergenic
TGACATAAAACCCAGGGTTA+AGG 0.473157 4:+88788860 MsG0480023704.01.T01:three_prime_UTR
AACGGCGAGGAGGAAGGGTT+GGG 0.478636 4:-88783806 None:intergenic
GAAACAGCAAGTTCATCATC+TGG 0.480522 4:-88787450 None:intergenic
CGACGATCAGCCAAAACAAC+CGG 0.481923 4:-88784003 None:intergenic
CTAATCAGTATAATATATCA+TGG 0.482591 4:+88788746 MsG0480023704.01.T01:intron
CTGATACTGGTGTTAGAGAC+GGG 0.489181 4:+88786552 MsG0480023704.01.T01:three_prime_UTR
AATGTCTTCGAGTTCCATAA+TGG 0.491211 4:+88786432 MsG0480023704.01.T01:CDS
AAAGTTATAACTAGGGTAAG+TGG 0.493753 4:+88786699 MsG0480023704.01.T01:three_prime_UTR
GTGAAGTGCGTCCATGCCTC+AGG 0.495018 4:+88785210 MsG0480023704.01.T01:CDS
GATAAAAGTAAATCTACAAA+AGG 0.495863 4:+88786721 MsG0480023704.01.T01:three_prime_UTR
TTTATAAGACATTAAAACTT+GGG 0.497971 4:-88783762 None:intergenic
CCATAATGGACGGTGGTACA+TGG 0.498888 4:+88786446 MsG0480023704.01.T01:CDS
AACAATCACAATTGCTCTTG+TGG 0.502462 4:-88785112 None:intergenic
TCAAATGACGGAGATCAGTC+CGG 0.503087 4:+88783978 MsG0480023704.01.T01:CDS
TGGATGGTACCTCTGTTTAG+TGG 0.504482 4:-88787490 None:intergenic
AAACCAAGGCTGCGCAGTTG+CGG 0.505582 4:+88786801 MsG0480023704.01.T01:three_prime_UTR
ACGGCGTGAATCTTCTTCTG+AGG 0.508405 4:-88783885 None:intergenic
TAAGCCTTCCACCCATTGCT+TGG 0.508666 4:-88785081 None:intergenic
TGCCAGAAAAGTTATAACTA+GGG 0.509050 4:+88786692 MsG0480023704.01.T01:three_prime_UTR
GGTTCGGGATGTACGTGCTC+GGG 0.510458 4:+88786338 MsG0480023704.01.T01:CDS
TAAATCTACAAAAGGATGGA+TGG 0.515548 4:+88786729 MsG0480023704.01.T01:three_prime_UTR
GACGGAGATCAGTCCGGCGC+CGG 0.523229 4:+88783984 MsG0480023704.01.T01:CDS
AAAACCCAGGGTTAAGGAAG+AGG 0.530788 4:+88788866 MsG0480023704.01.T01:three_prime_UTR
GGAACAAATATCTTAGTAGC+TGG 0.533811 4:-88787387 None:intergenic
TACAGTAACGGCGAGGAGGA+AGG 0.535898 4:-88783812 None:intergenic
CTGCTAATGATGATAATGCC+TGG 0.536031 4:+88784142 MsG0480023704.01.T01:CDS
GACCAATTCTTTGATGCGTA+AGG 0.536128 4:+88784119 MsG0480023704.01.T01:CDS
TGAAGAGCTAAGTGTTTGCA+AGG 0.537825 4:+88788810 MsG0480023704.01.T01:three_prime_UTR
GAAGTTGGAGAGCATAGTGT+GGG 0.545271 4:-88787411 None:intergenic
CACCTCAATGAAGCAGTGGC+TGG 0.545479 4:-88788839 None:intergenic
ATAATGGAGCAGAGCAGTTG+TGG 0.545803 4:+88783568 MsG0480023704.01.T01:five_prime_UTR
CGGCGTGAATCTTCTTCTGA+GGG 0.546264 4:-88783884 None:intergenic
AAACCCAGGGTTAAGGAAGA+GGG 0.548593 4:+88788867 MsG0480023704.01.T01:three_prime_UTR
TTCTGTGATGAATGGGGATG+TGG 0.549069 4:+88786482 MsG0480023704.01.T01:CDS
AAAGTAAATCTACAAAAGGA+TGG 0.551530 4:+88786725 MsG0480023704.01.T01:three_prime_UTR
ATTATTCACCTTGTGATAGA+GGG 0.556278 4:-88784169 None:intergenic
ATAATGGAGTAATGCAGAGC+TGG 0.557492 4:+88786277 MsG0480023704.01.T01:CDS
TCGCACGGGTTCTTCGATGA+TGG 0.558296 4:+88784023 MsG0480023704.01.T01:CDS
TGAAGTTGGAGAGCATAGTG+TGG 0.558341 4:-88787412 None:intergenic
AGAAACACCACCGTTCAAGT+AGG 0.561761 4:-88783956 None:intergenic
TGATGATAATGTTGAGGTGT+TGG 0.564881 4:-88787333 None:intergenic
TCAGCCAAAACAACCGGCGC+CGG 0.564918 4:-88783997 None:intergenic
ACAGTAACGGCGAGGAGGAA+GGG 0.570211 4:-88783811 None:intergenic
CATGAAAACATATGTTGACA+TGG 0.572798 4:+88786386 MsG0480023704.01.T01:CDS
TAATGGAGCAGAGCAGTTGT+GGG 0.572826 4:+88783569 MsG0480023704.01.T01:five_prime_UTR
ATAGCGTTAGACCAAGCAAT+GGG 0.584114 4:+88785070 MsG0480023704.01.T01:CDS
CATATGTTGACATGGATACA+GGG 0.584264 4:+88786394 MsG0480023704.01.T01:CDS
CGGTGGTGTTTCTCAAATGA+CGG 0.584392 4:+88783966 MsG0480023704.01.T01:CDS
TATAAATTGAAGTAAAAGTG+TGG 0.587372 4:+88787225 MsG0480023704.01.T01:three_prime_UTR
TAGACCAAGCAATGGGTGGA+AGG 0.587863 4:+88785077 MsG0480023704.01.T01:CDS
GAAACACCACCGTTCAAGTA+GGG 0.593560 4:-88783955 None:intergenic
TACCAGCCACTGCTTCATTG+AGG 0.593729 4:+88788837 MsG0480023704.01.T01:three_prime_UTR
AGCGCGTGCGTAGTAATCTC+CGG 0.599200 4:-88784057 None:intergenic
AAATTGAAAGTGAAAGTGAA+AGG 0.599409 4:-88783668 None:intergenic
AAGTTAAGACTTGATGCCAC+GGG 0.599994 4:-88786761 None:intergenic
TTCTACAAATAAATAAACAC+GGG 0.602807 4:+88787099 MsG0480023704.01.T01:three_prime_UTR
TCTGATACTGGTGTTAGAGA+CGG 0.607643 4:+88786551 MsG0480023704.01.T01:three_prime_UTR
CAAGTAGGGTACAACAGCGT+CGG 0.609614 4:-88783941 None:intergenic
GCTGTTGTACCCTACTTGAA+CGG 0.614335 4:+88783946 MsG0480023704.01.T01:CDS
CTGGAAAGCCCTCTATCACA+AGG 0.615333 4:+88784161 MsG0480023704.01.T01:CDS
ATGTCACCTCAATGAAGCAG+TGG 0.616278 4:-88788843 None:intergenic
CTGGCAACTCATATTCAACT+GGG 0.617183 4:+88786296 MsG0480023704.01.T01:CDS
CACGGGTTCTTCGATGATGG+AGG 0.617466 4:+88784026 MsG0480023704.01.T01:CDS
GTGGAGCAACAAATTGTGCA+TGG 0.619103 4:+88786501 MsG0480023704.01.T01:CDS
TTGAGGTGACATAAAACCCA+GGG 0.626355 4:+88788854 MsG0480023704.01.T01:three_prime_UTR
TAAGTTAAGACTTGATGCCA+CGG 0.627163 4:-88786762 None:intergenic
GAGAGCGATGAAGAAACAGA+GGG 0.628490 4:-88783839 None:intergenic
ATTGAAAGACGACACAGACT+GGG 0.629064 4:-88784096 None:intergenic
AGAGAGCGATGAAGAAACAG+AGG 0.629563 4:-88783840 None:intergenic
GCGTTAGACCAAGCAATGGG+TGG 0.630975 4:+88785073 MsG0480023704.01.T01:CDS
CAGTTACAGTAACGGCGAGG+AGG 0.633626 4:-88783816 None:intergenic
GTTGGAGAGCATAGTGTGGG+AGG 0.638611 4:-88787408 None:intergenic
GTTGTACCCTACTTGAACGG+TGG 0.638978 4:+88783949 MsG0480023704.01.T01:CDS
TTCTAGTTCCAGTAGCAGTG+TGG 0.641074 4:+88786861 MsG0480023704.01.T01:three_prime_UTR
ATCTGACAATAATATTGGAG+AGG 0.641799 4:-88786993 None:intergenic
AACCCAGGGTTAAGGAAGAG+GGG 0.643408 4:+88788868 MsG0480023704.01.T01:three_prime_UTR
GATAGCGTTAGACCAAGCAA+TGG 0.643482 4:+88785069 MsG0480023704.01.T01:CDS
TCTTCGAGTTCCATAATGGA+CGG 0.650373 4:+88786436 MsG0480023704.01.T01:CDS
ACAGAGGGCAGTTACAGTAA+CGG 0.654661 4:-88783824 None:intergenic
TGATACTGGTGTTAGAGACG+GGG 0.654781 4:+88786553 MsG0480023704.01.T01:three_prime_UTR
GTTCTACAAATAAATAAACA+CGG 0.662074 4:+88787098 MsG0480023704.01.T01:three_prime_UTR
ATTGAGGTGACATAAAACCC+AGG 0.671779 4:+88788853 MsG0480023704.01.T01:three_prime_UTR
ATTATGGAACTCGAAGACAT+TGG 0.675177 4:-88786430 None:intergenic
TGAACGTGATGATAATGTTG+AGG 0.683199 4:-88787339 None:intergenic
TGGATGGAAAAGATTACCCG+TGG 0.701763 4:+88786745 MsG0480023704.01.T01:three_prime_UTR
CAGAATTCTCCACTAAACAG+AGG 0.708713 4:+88787481 MsG0480023704.01.T01:three_prime_UTR
GGGCAGTTACAGTAACGGCG+AGG 0.712615 4:-88783819 None:intergenic
TCGAGTTCCATAATGGACGG+TGG 0.721670 4:+88786439 MsG0480023704.01.T01:CDS
TCACAGTTCTGTGATGAATG+GGG 0.737618 4:+88786476 MsG0480023704.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAATAAAAAATA+GGG - Chr4:88788012-88788031 None:intergenic 0.0%
!! AAGATTTATCTATAAATAAA+TGG - Chr4:88787863-88787882 None:intergenic 10.0%
!!! AAAGATTTTTATTTAATGAA+GGG - Chr4:88787521-88787540 None:intergenic 10.0%
!!! TAAAATTATCTTCATATTTT+TGG + Chr4:88785290-88785309 MsG0480023704.01.T01:intron 10.0%
!! AAAGATAATATTTAAGGATT+TGG + Chr4:88785527-88785546 MsG0480023704.01.T01:intron 15.0%
!! AAATCCTTAAATATTATCTT+TGG - Chr4:88785528-88785547 None:intergenic 15.0%
!! AAATGTTGAATATTTAAGAA+TGG + Chr4:88784551-88784570 MsG0480023704.01.T01:intron 15.0%
!! AATTGAAAACAGTATAAAAA+TGG - Chr4:88784215-88784234 None:intergenic 15.0%
!! ATTTATAAGACATTAAAACT+TGG - Chr4:88783766-88783785 None:intergenic 15.0%
!! CTATGGAATTATATAATAAA+AGG - Chr4:88788300-88788319 None:intergenic 15.0%
!! CTTCATTAAATAAAAATCTT+TGG + Chr4:88787520-88787539 MsG0480023704.01.T01:intron 15.0%
!! GATTTAAGAAATATATTGTT+GGG + Chr4:88787030-88787049 MsG0480023704.01.T01:three_prime_UTR 15.0%
!! TCTGATTTAAATTTAATAAC+AGG - Chr4:88785457-88785476 None:intergenic 15.0%
!! TGATTTAAGAAATATATTGT+TGG + Chr4:88787029-88787048 MsG0480023704.01.T01:three_prime_UTR 15.0%
!! TTTATAAGACATTAAAACTT+GGG - Chr4:88783765-88783784 None:intergenic 15.0%
!!! AAAATTATCATTTTTGGTTT+TGG + Chr4:88784264-88784283 MsG0480023704.01.T01:intron 15.0%
!!! AAGATTTTTATTTAATGAAG+GGG - Chr4:88787520-88787539 None:intergenic 15.0%
!!! AAGTTTTAATGTCTTATAAA+TGG + Chr4:88783765-88783784 MsG0480023704.01.T01:exon 15.0%
!!! ATATCCGTAAATATTTTTAT+CGG + Chr4:88787186-88787205 MsG0480023704.01.T01:three_prime_UTR 15.0%
!!! ATTCATCTATTGTTTTTTTT+TGG + Chr4:88785778-88785797 MsG0480023704.01.T01:intron 15.0%
!!! CAAAAATGATAATTTTAATG+TGG - Chr4:88784260-88784279 None:intergenic 15.0%
!!! CAAAGATTTTTATTTAATGA+AGG - Chr4:88787522-88787541 None:intergenic 15.0%
!!! CACATTAAAATTATCATTTT+TGG + Chr4:88784258-88784277 MsG0480023704.01.T01:intron 15.0%
!!! CTTTTATTATATAATTCCAT+AGG + Chr4:88788298-88788317 MsG0480023704.01.T01:intron 15.0%
!!! GATAATAACTCTTTTTTTTT+TGG + Chr4:88788571-88788590 MsG0480023704.01.T01:intron 15.0%
!!! TTTTTCTTTCTTCAAATTTA+GGG + Chr4:88783701-88783720 MsG0480023704.01.T01:five_prime_UTR 15.0%
!!! TTTTTTGAAATTCTGTTTTT+AGG + Chr4:88785029-88785048 MsG0480023704.01.T01:intron 15.0%
!! AAAAATAGTAATTGGCAAAT+GGG - Chr4:88784438-88784457 None:intergenic 20.0%
!! AAAATTATCCTATTAACCAT+TGG - Chr4:88785737-88785756 None:intergenic 20.0%
!! AAATTTAAATCAGAAACAAG+AGG + Chr4:88785463-88785482 MsG0480023704.01.T01:intron 20.0%
!! AACACCGATAAAAATATTTA+CGG - Chr4:88787193-88787212 None:intergenic 20.0%
!! AATTGTGTGAATTGTTATAT+AGG + Chr4:88788626-88788645 MsG0480023704.01.T01:intron 20.0%
!! ACAATTATTTAGAAAATGGA+GGG - Chr4:88785566-88785585 None:intergenic 20.0%
!! ATAATATTTAAGGATTTGGA+AGG + Chr4:88785531-88785550 MsG0480023704.01.T01:intron 20.0%
!! ATCAATGTATTCGTAAAATA+GGG + Chr4:88788936-88788955 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! ATGTTTAGAAAAACTTTCTA+TGG + Chr4:88784469-88784488 MsG0480023704.01.T01:intron 20.0%
!! CTAAATTTGAAGAAAGAAAA+AGG - Chr4:88783702-88783721 None:intergenic 20.0%
!! CTAATCAGTATAATATATCA+TGG + Chr4:88788746-88788765 MsG0480023704.01.T01:intron 20.0%
!! GATAAAAGTAAATCTACAAA+AGG + Chr4:88786721-88786740 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! GTTCTACAAATAAATAAACA+CGG + Chr4:88787098-88787117 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! TAATATTTAAGGATTTGGAA+GGG + Chr4:88785532-88785551 MsG0480023704.01.T01:intron 20.0%
!! TATAAATTGAAGTAAAAGTG+TGG + Chr4:88787225-88787244 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! TATCAATGTATTCGTAAAAT+AGG + Chr4:88788935-88788954 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! TCTATAAATAAATGGTAAAC+TGG - Chr4:88787855-88787874 None:intergenic 20.0%
!! TCTGTCAATATAATATTACT+CGG - Chr4:88785379-88785398 None:intergenic 20.0%
!! TTCACCAAAGATAATATTTA+AGG + Chr4:88785521-88785540 MsG0480023704.01.T01:intron 20.0%
!! TTCTACAAATAAATAAACAC+GGG + Chr4:88787099-88787118 MsG0480023704.01.T01:three_prime_UTR 20.0%
!! TTTCATACTGTATATAATAC+AGG + Chr4:88786657-88786676 MsG0480023704.01.T01:three_prime_UTR 20.0%
!!! ATTATATTGACAGAAGTTTT+TGG + Chr4:88785385-88785404 MsG0480023704.01.T01:intron 20.0%
!!! ATTTTGTTTATGTTGATAGA+AGG + Chr4:88787973-88787992 MsG0480023704.01.T01:intron 20.0%
!!! CTTTTTCTTTCTTCAAATTT+AGG + Chr4:88783700-88783719 MsG0480023704.01.T01:five_prime_UTR 20.0%
!!! GCAGTGTTTTTTTTTTTTTT+TGG + Chr4:88787071-88787090 MsG0480023704.01.T01:three_prime_UTR 20.0%
!!! TCCATTTTCTAAATAATTGT+CGG + Chr4:88785566-88785585 MsG0480023704.01.T01:intron 20.0%
!!! TTTTGTTTATGTTGATAGAA+GGG + Chr4:88787974-88787993 MsG0480023704.01.T01:intron 20.0%
!!! TTTTTTTTTTCATTGATGCA+CGG + Chr4:88789005-88789024 MsG0480023704.01.T01:three_prime_UTR 20.0%
! AAAGATAAGATCAAGAGTTA+AGG - Chr4:88788207-88788226 None:intergenic 25.0%
! AAAGTAAATCTACAAAAGGA+TGG + Chr4:88786725-88786744 MsG0480023704.01.T01:three_prime_UTR 25.0%
! AAATTGAAAGTGAAAGTGAA+AGG - Chr4:88783671-88783690 None:intergenic 25.0%
! AATATAATATTACTCGGAAG+TGG - Chr4:88785373-88785392 None:intergenic 25.0%
! ACCGACAATTATTTAGAAAA+TGG - Chr4:88785570-88785589 None:intergenic 25.0%
! ACCTTAATGCATTATGTATA+TGG - Chr4:88784581-88784600 None:intergenic 25.0%
! ACTTTATACCAATGGTTAAT+AGG + Chr4:88785726-88785745 MsG0480023704.01.T01:intron 25.0%
! AGGGTTTCTAATTTCAAATT+AGG + Chr4:88783720-88783739 MsG0480023704.01.T01:five_prime_UTR 25.0%
! ATAAAGTGAGATGTATTTCA+TGG - Chr4:88788530-88788549 None:intergenic 25.0%
! ATATAATATTACTCGGAAGT+GGG - Chr4:88785372-88785391 None:intergenic 25.0%
! CAAAAACAAAATATGCTGTA+AGG + Chr4:88788891-88788910 MsG0480023704.01.T01:three_prime_UTR 25.0%
! CAAAAATAGTAATTGGCAAA+TGG - Chr4:88784439-88784458 None:intergenic 25.0%
! CCTTAATGCATTATGTATAT+GGG - Chr4:88784580-88784599 None:intergenic 25.0%
! GACAATTATTTAGAAAATGG+AGG - Chr4:88785567-88785586 None:intergenic 25.0%
! GGGTTTCTAATTTCAAATTA+GGG + Chr4:88783721-88783740 MsG0480023704.01.T01:five_prime_UTR 25.0%
! GTCTATTAATTTCAAAACCT+AGG - Chr4:88784238-88784257 None:intergenic 25.0%
! GTGTTTATACTTTATACCAA+TGG + Chr4:88785718-88785737 MsG0480023704.01.T01:intron 25.0%
! TAAAGTATAAACACATGATG+CGG - Chr4:88785712-88785731 None:intergenic 25.0%
! TACCTTAACAAAATATAGTG+AGG - Chr4:88785900-88785919 None:intergenic 25.0%
! TCTTCGTCAAAAATAGTAAT+TGG - Chr4:88784446-88784465 None:intergenic 25.0%
! TGAATTGTTATATAGGATGA+TGG + Chr4:88788633-88788652 MsG0480023704.01.T01:intron 25.0%
! TGATATATTATGTCTGATAC+TGG + Chr4:88786539-88786558 MsG0480023704.01.T01:three_prime_UTR 25.0%
! TGTACAAACCAAAAAAATCA+TGG + Chr4:88787364-88787383 MsG0480023704.01.T01:three_prime_UTR 25.0%
! TTAGAAAAACTTTCTATGGA+GGG + Chr4:88784473-88784492 MsG0480023704.01.T01:intron 25.0%
! TTATTTAATGAAGGGGAAAA+TGG - Chr4:88787513-88787532 None:intergenic 25.0%
! TTTAAGAGATAAGTCCATTT+CGG + Chr4:88785155-88785174 MsG0480023704.01.T01:CDS 25.0%
! TTTACTCCCAAATTAATAGT+CGG + Chr4:88785663-88785682 MsG0480023704.01.T01:intron 25.0%
! TTTAGAAAAACTTTCTATGG+AGG + Chr4:88784472-88784491 MsG0480023704.01.T01:intron 25.0%
!! ACATAATGCATTAAGGTTTT+GGG + Chr4:88784584-88784603 MsG0480023704.01.T01:intron 25.0%
!! CAAATTTTGCAGTAACAAAA+AGG + Chr4:88788772-88788791 MsG0480023704.01.T01:intron 25.0%
!! CACTATATTTTGTTAAGGTA+GGG + Chr4:88785900-88785919 MsG0480023704.01.T01:intron 25.0%
!! CTTTTTGTTACTGCAAAATT+TGG - Chr4:88788774-88788793 None:intergenic 25.0%
!! TACATAATGCATTAAGGTTT+TGG + Chr4:88784583-88784602 MsG0480023704.01.T01:intron 25.0%
!! TCACTATATTTTGTTAAGGT+AGG + Chr4:88785899-88785918 MsG0480023704.01.T01:intron 25.0%
!! TCTATTAACTCCTTTTTACT+CGG - Chr4:88787133-88787152 None:intergenic 25.0%
!! TGCTTGAAATTTTTCGTAAT+TGG + Chr4:88786594-88786613 MsG0480023704.01.T01:three_prime_UTR 25.0%
!! TTATACTGTTTTCAATTCCT+AGG + Chr4:88784218-88784237 MsG0480023704.01.T01:intron 25.0%
!! TTCCTCACTATATTTTGTTA+AGG + Chr4:88785895-88785914 MsG0480023704.01.T01:intron 25.0%
!! TTTGTTTATGTTGATAGAAG+GGG + Chr4:88787975-88787994 MsG0480023704.01.T01:intron 25.0%
!! TTTTGAATTTGTAGAAGTTC+TGG + Chr4:88786152-88786171 MsG0480023704.01.T01:intron 25.0%
!!! AAACTGAGTTTTGGTTATTT+AGG + Chr4:88786056-88786075 MsG0480023704.01.T01:intron 25.0%
!!! AAAGTTTTAAAATTCGACTC+TGG - Chr4:88786900-88786919 None:intergenic 25.0%
!!! AACTGAGTTTTGGTTATTTA+GGG + Chr4:88786057-88786076 MsG0480023704.01.T01:intron 25.0%
!!! AGGTGTTATTTAAGATAGAA+AGG - Chr4:88788473-88788492 None:intergenic 25.0%
!!! ATTGTTTTTTTTTGGTTGTG+AGG + Chr4:88785786-88785805 MsG0480023704.01.T01:intron 25.0%
!!! ATTTTTTATTTTGGTTCGCA+AGG + Chr4:88788020-88788039 MsG0480023704.01.T01:intron 25.0%
!!! CAAATGAGAAGGATTTTAAT+AGG + Chr4:88787941-88787960 MsG0480023704.01.T01:intron 25.0%
!!! CTAGTTACACTTTAGAATAA+AGG + Chr4:88784861-88784880 MsG0480023704.01.T01:intron 25.0%
!!! CTTTTTGTTTCATGAGTAAT+TGG + Chr4:88785254-88785273 MsG0480023704.01.T01:intron 25.0%
!!! GTTTTCTAGCTTGAATATTT+TGG + Chr4:88785993-88786012 MsG0480023704.01.T01:intron 25.0%
!!! TATCTTCATATTTTTGGATG+TGG + Chr4:88785296-88785315 MsG0480023704.01.T01:intron 25.0%
!!! TATTCTAAAGTGTAACTAGT+AGG - Chr4:88784860-88784879 None:intergenic 25.0%
!!! TTTTTTATTTTGGTTCGCAA+GGG + Chr4:88788021-88788040 MsG0480023704.01.T01:intron 25.0%
!!! TTTTTTTTTCATTGATGCAC+GGG + Chr4:88789006-88789025 MsG0480023704.01.T01:three_prime_UTR 25.0%
AAAATATGCTGTAAGGATTC+TGG + Chr4:88788898-88788917 MsG0480023704.01.T01:three_prime_UTR 30.0%
AAAGGAAGGGATTGATTATT+AGG + Chr4:88785345-88785364 MsG0480023704.01.T01:intron 30.0%
AAAGTTATAACTAGGGTAAG+TGG + Chr4:88786699-88786718 MsG0480023704.01.T01:three_prime_UTR 30.0%
AAATCACTAGAAGATACACA+TGG - Chr4:88785000-88785019 None:intergenic 30.0%
AATTATTCACCTTGTGATAG+AGG - Chr4:88784173-88784192 None:intergenic 30.0%
AGCTATTACACCATTATCTA+AGG - Chr4:88784798-88784817 None:intergenic 30.0%
ATATAGTGAGGAAAAGAAAG+AGG - Chr4:88785888-88785907 None:intergenic 30.0%
ATCCGTAAATAAAAACCTAG+TGG - Chr4:88785415-88785434 None:intergenic 30.0%
ATCTGACAATAATATTGGAG+AGG - Chr4:88786996-88787015 None:intergenic 30.0%
ATGAAATATTGGAACACTTG+AGG - Chr4:88788493-88788512 None:intergenic 30.0%
ATTATTCACCTTGTGATAGA+GGG - Chr4:88784172-88784191 None:intergenic 30.0%
ATTTACGGATAGTCAAAATC+TGG + Chr4:88785425-88785444 MsG0480023704.01.T01:intron 30.0%
CATAAAACACTGTGAATTAG+TGG + Chr4:88788321-88788340 MsG0480023704.01.T01:intron 30.0%
CATGAAAACATATGTTGACA+TGG + Chr4:88786386-88786405 MsG0480023704.01.T01:CDS 30.0%
CATTTGAATTTATGCCATTC+TGG + Chr4:88786209-88786228 MsG0480023704.01.T01:intron 30.0%
CCCATATACATAATGCATTA+AGG + Chr4:88784577-88784596 MsG0480023704.01.T01:intron 30.0%
CTTGATTCTAAGTCTTTCTT+AGG + Chr4:88788093-88788112 MsG0480023704.01.T01:intron 30.0%
GAAATTGTTAAGAACAATGG+TGG - Chr4:88784416-88784435 None:intergenic 30.0%
GAGCAATCTGACAATAATAT+TGG - Chr4:88787001-88787020 None:intergenic 30.0%
GATAAGAAACATAACTTACG+TGG - Chr4:88784829-88784848 None:intergenic 30.0%
GATCAAGAGTTAAGGTAATT+TGG - Chr4:88788199-88788218 None:intergenic 30.0%
GATCAATGGTAATTTGAACA+TGG - Chr4:88784714-88784733 None:intergenic 30.0%
GTTGTAAAAAGCAGAATTGA+TGG + Chr4:88786941-88786960 MsG0480023704.01.T01:three_prime_UTR 30.0%
TAAATCTACAAAAGGATGGA+TGG + Chr4:88786729-88786748 MsG0480023704.01.T01:three_prime_UTR 30.0%
TACCATTGATCTTAAAACAG+CGG + Chr4:88784723-88784742 MsG0480023704.01.T01:intron 30.0%
TAGAAAAACTTTCTATGGAG+GGG + Chr4:88784474-88784493 MsG0480023704.01.T01:intron 30.0%
TAGTTCGGTAGATGAAATAT+TGG - Chr4:88788504-88788523 None:intergenic 30.0%
TATAGTGAGGAAAAGAAAGA+GGG - Chr4:88785887-88785906 None:intergenic 30.0%
TATGACCAATCATTTAACAC+AGG + Chr4:88788231-88788250 MsG0480023704.01.T01:intron 30.0%
TCTAGTTAGTTCAAATGAGA+AGG + Chr4:88787930-88787949 MsG0480023704.01.T01:intron 30.0%
TGCCAGAAAAGTTATAACTA+GGG + Chr4:88786692-88786711 MsG0480023704.01.T01:three_prime_UTR 30.0%
TGGGAAATTGTTAAGAACAA+TGG - Chr4:88784419-88784438 None:intergenic 30.0%
TGTCTCTTTCTCATGTATAT+GGG + Chr4:88787825-88787844 MsG0480023704.01.T01:intron 30.0%
TTACACCATTATCTAAGGAA+AGG - Chr4:88784793-88784812 None:intergenic 30.0%
TTGATACTAAAGAGAGATAC+AGG + Chr4:88786082-88786101 MsG0480023704.01.T01:intron 30.0%
TTGCCAGAAAAGTTATAACT+AGG + Chr4:88786691-88786710 MsG0480023704.01.T01:three_prime_UTR 30.0%
TTGTCTCTTTCTCATGTATA+TGG + Chr4:88787824-88787843 MsG0480023704.01.T01:intron 30.0%
! AAACGACAATCCTTTAGAAA+AGG + Chr4:88785818-88785837 MsG0480023704.01.T01:intron 30.0%
! AAAGGCGTAAGAAATGAAAT+TGG - Chr4:88783653-88783672 None:intergenic 30.0%
! AGGTCAATAAAACTGAGTTT+TGG + Chr4:88786047-88786066 MsG0480023704.01.T01:intron 30.0%
! ATTGCTGTTATAAAACCCTA+GGG + Chr4:88784295-88784314 MsG0480023704.01.T01:intron 30.0%
! CATGTCAACATATGTTTTCA+TGG - Chr4:88786388-88786407 None:intergenic 30.0%
! CTATTAACTCCTTTTTACTC+GGG - Chr4:88787132-88787151 None:intergenic 30.0%
! TACCCTAGTTATAACTTTTC+TGG - Chr4:88786697-88786716 None:intergenic 30.0%
! TACTGATTAGAAGCTAAAGA+CGG - Chr4:88788736-88788755 None:intergenic 30.0%
! TATTGCTGTTATAAAACCCT+AGG + Chr4:88784294-88784313 MsG0480023704.01.T01:intron 30.0%
! TTTTGCAGTAACAAAAAGGA+TGG + Chr4:88788776-88788795 MsG0480023704.01.T01:intron 30.0%
!! AAGAGTGTGTTTTGCAAATA+GGG + Chr4:88788369-88788388 MsG0480023704.01.T01:intron 30.0%
!! ACTGTACCGACTATTAATTT+GGG - Chr4:88785672-88785691 None:intergenic 30.0%
!! GTTGGGAATGATAATTTGTT+AGG + Chr4:88787047-88787066 MsG0480023704.01.T01:three_prime_UTR 30.0%
!! TACTGTACCGACTATTAATT+TGG - Chr4:88785673-88785692 None:intergenic 30.0%
!! TATTGACAGAAGTTTTTGGA+TGG + Chr4:88785389-88785408 MsG0480023704.01.T01:intron 30.0%
!! TGTATTTCATGGTTCTAGTT+CGG - Chr4:88788519-88788538 None:intergenic 30.0%
!!! TGTTTTAATTTTGCCACTAC+CGG - Chr4:88787771-88787790 None:intergenic 30.0%
!!! TTTATCGGTGTTGAACTTTT+GGG + Chr4:88787201-88787220 MsG0480023704.01.T01:three_prime_UTR 30.0%
!!! TTTTATCGGTGTTGAACTTT+TGG + Chr4:88787200-88787219 MsG0480023704.01.T01:three_prime_UTR 30.0%
!!! TTTTTATTTTGGTTCGCAAG+GGG + Chr4:88788022-88788041 MsG0480023704.01.T01:intron 30.0%
AAAAAAATCCACACTGCTAC+TGG - Chr4:88786872-88786891 None:intergenic 35.0%
AACAATCACAATTGCTCTTG+TGG - Chr4:88785115-88785134 None:intergenic 35.0%
AACACTATAATCCATGTTGC+AGG + Chr4:88786253-88786272 MsG0480023704.01.T01:intron 35.0%
AAGACATTGGTCACATTGAA+TGG - Chr4:88786420-88786439 None:intergenic 35.0%
AATATTTGTTCACGCCAGAA+TGG - Chr4:88786226-88786245 None:intergenic 35.0%
AATCCATGTTGCAGGTATAA+TGG + Chr4:88786261-88786280 MsG0480023704.01.T01:intron 35.0%
ACATATGTTGACATGGATAC+AGG + Chr4:88786393-88786412 MsG0480023704.01.T01:CDS 35.0%
ACTAGAATGCGCAACAAAAT+TGG - Chr4:88786848-88786867 None:intergenic 35.0%
AGACAATAGATACCTTGACT+TGG - Chr4:88787810-88787829 None:intergenic 35.0%
AGGTGTTTCTTAAGCTAGAA+AGG - Chr4:88788453-88788472 None:intergenic 35.0%
AGTAAGACAGGACAAAGTAT+AGG - Chr4:88784917-88784936 None:intergenic 35.0%
ATAGTGAGGAAAAGAAAGAG+GGG - Chr4:88785886-88785905 None:intergenic 35.0%
ATCAAGATTTGAGCTAGCAT+TGG - Chr4:88788678-88788697 None:intergenic 35.0%
ATCACAGTTCTGTGATGAAT+GGG + Chr4:88786475-88786494 MsG0480023704.01.T01:CDS 35.0%
ATGATGCGGTTTATTGAGTA+TGG - Chr4:88785698-88785717 None:intergenic 35.0%
ATTAAAGGGCTATGACTATG+AGG + Chr4:88788131-88788150 MsG0480023704.01.T01:intron 35.0%
ATTATGGAACTCGAAGACAT+TGG - Chr4:88786433-88786452 None:intergenic 35.0%
CACCTCTACGTTCAATTAAA+GGG + Chr4:88788117-88788136 MsG0480023704.01.T01:intron 35.0%
CATATGTTGACATGGATACA+GGG + Chr4:88786394-88786413 MsG0480023704.01.T01:CDS 35.0%
CTGTTCCTTTCCTTAGATAA+TGG + Chr4:88784785-88784804 MsG0480023704.01.T01:intron 35.0%
GAAATTGAGAAAGGATGCAA+TGG + Chr4:88787605-88787624 MsG0480023704.01.T01:three_prime_UTR 35.0%
GGAAACGAAGAAATTGAGAA+AGG + Chr4:88787596-88787615 MsG0480023704.01.T01:three_prime_UTR 35.0%
GGAACAAATATCTTAGTAGC+TGG - Chr4:88787390-88787409 None:intergenic 35.0%
GGACAAAGTATAGGATGTTT+AGG - Chr4:88784908-88784927 None:intergenic 35.0%
GTTATGTTTCTTATCGTCCT+TGG + Chr4:88784834-88784853 MsG0480023704.01.T01:intron 35.0%
TAAGTTAAGACTTGATGCCA+CGG - Chr4:88786765-88786784 None:intergenic 35.0%
TAGAAAAGGTGGGAATGATT+TGG + Chr4:88785832-88785851 MsG0480023704.01.T01:intron 35.0%
TCACCTCTACGTTCAATTAA+AGG + Chr4:88788116-88788135 MsG0480023704.01.T01:intron 35.0%
TCCTGTCTTACTGTGTATTT+GGG + Chr4:88784925-88784944 MsG0480023704.01.T01:intron 35.0%
TGATATACACTGCACTTGAA+AGG + Chr4:88785327-88785346 MsG0480023704.01.T01:intron 35.0%
TGATCTTAAAACAGCGGTTT+AGG + Chr4:88784729-88784748 MsG0480023704.01.T01:intron 35.0%
TGGCATCAAGTCTTAACTTA+AGG + Chr4:88786765-88786784 MsG0480023704.01.T01:three_prime_UTR 35.0%
TGTTGCCTGTGTTAAATGAT+TGG - Chr4:88788239-88788258 None:intergenic 35.0%
TTAATGAAGGGGAAAATGGA+TGG - Chr4:88787509-88787528 None:intergenic 35.0%
! AACAGCGGTTTAGGTTTAAA+AGG + Chr4:88784738-88784757 MsG0480023704.01.T01:intron 35.0%
! AACTCTCTAGTACTAGTTTC+AGG + Chr4:88786027-88786046 MsG0480023704.01.T01:intron 35.0%
! AAGCTGCATCAAGACTTTTA+AGG + Chr4:88787906-88787925 MsG0480023704.01.T01:intron 35.0%
! AATGTCTTCGAGTTCCATAA+TGG + Chr4:88786432-88786451 MsG0480023704.01.T01:CDS 35.0%
! AGCTGCATCAAGACTTTTAA+GGG + Chr4:88787907-88787926 MsG0480023704.01.T01:intron 35.0%
! ATCATTCCCACCTTTTCTAA+AGG - Chr4:88785831-88785850 None:intergenic 35.0%
! GACAATCCTTTAGAAAAGGT+GGG + Chr4:88785822-88785841 MsG0480023704.01.T01:intron 35.0%
! GGTTTAGGTTTAAAAGGAGT+GGG + Chr4:88784744-88784763 MsG0480023704.01.T01:intron 35.0%
! TGAACGTGATGATAATGTTG+AGG - Chr4:88787342-88787361 None:intergenic 35.0%
! TGATGATAATGTTGAGGTGT+TGG - Chr4:88787336-88787355 None:intergenic 35.0%
! TTCACAGTGTTTTATGCCTA+TGG - Chr4:88788317-88788336 None:intergenic 35.0%
! TTCTAAAGGATTGTCGTTTC+AGG - Chr4:88785817-88785836 None:intergenic 35.0%
! TTGCTGTTATAAAACCCTAG+GGG + Chr4:88784296-88784315 MsG0480023704.01.T01:intron 35.0%
!! AAGGATTGAACTTTCAGGTT+CGG + Chr4:88786322-88786341 MsG0480023704.01.T01:CDS 35.0%
!! GAAGAGTGTGTTTTGCAAAT+AGG + Chr4:88788368-88788387 MsG0480023704.01.T01:intron 35.0%
!! GGCCACTAGGTTTTTATTTA+CGG + Chr4:88785410-88785429 MsG0480023704.01.T01:intron 35.0%
!! TTGGTTTGGAGGAGAAAAAT+TGG - Chr4:88788659-88788678 None:intergenic 35.0%
!!! AACCGCTGTTTTAAGATCAA+TGG - Chr4:88784728-88784747 None:intergenic 35.0%
!!! CTGTTTTTAGGACTTCACAT+TGG + Chr4:88785041-88785060 MsG0480023704.01.T01:intron 35.0%
!!! TAATGCATTAAGGTTTTGGG+TGG + Chr4:88784587-88784606 MsG0480023704.01.T01:intron 35.0%
AAAAAAGTTCTCCTGAGGCA+TGG - Chr4:88785224-88785243 None:intergenic 40.0%
AAAACGACTCATTGCCGAAA+TGG - Chr4:88785172-88785191 None:intergenic 40.0%
AAAGTGTAACTAGTAGGCCA+AGG - Chr4:88784854-88784873 None:intergenic 40.0%
AAGTTAAGACTTGATGCCAC+GGG - Chr4:88786764-88786783 None:intergenic 40.0%
ACCCAAATACACAGTAAGAC+AGG - Chr4:88784929-88784948 None:intergenic 40.0%
ACGCATGAATTGTTAGCAGT+TGG - Chr4:88784326-88784345 None:intergenic 40.0%
ACTCCATTATACCTGCAACA+TGG - Chr4:88786267-88786286 None:intergenic 40.0%
ACTGCTAACAATTCATGCGT+TGG + Chr4:88784326-88784345 MsG0480023704.01.T01:intron 40.0%
AGCCCTTTAATTGAACGTAG+AGG - Chr4:88788122-88788141 None:intergenic 40.0%
AGCCTTACGCATCAAAGAAT+TGG - Chr4:88784124-88784143 None:intergenic 40.0%
ATACACTGCACTTGAAAGGA+AGG + Chr4:88785331-88785350 MsG0480023704.01.T01:intron 40.0%
ATAGCGTTAGACCAAGCAAT+GGG + Chr4:88785070-88785089 MsG0480023704.01.T01:CDS 40.0%
ATTGAAAGACGACACAGACT+GGG - Chr4:88784099-88784118 None:intergenic 40.0%
ATTGAGGTGACATAAAACCC+AGG + Chr4:88788853-88788872 MsG0480023704.01.T01:three_prime_UTR 40.0%
CAGAATTCTCCACTAAACAG+AGG + Chr4:88787481-88787500 MsG0480023704.01.T01:three_prime_UTR 40.0%
CATCACAGTTCTGTGATGAA+TGG + Chr4:88786474-88786493 MsG0480023704.01.T01:CDS 40.0%
CGGATAGTCAAAATCTGGAT+TGG + Chr4:88785430-88785449 MsG0480023704.01.T01:intron 40.0%
CTCATATTCAACTGGGATCA+AGG + Chr4:88786303-88786322 MsG0480023704.01.T01:CDS 40.0%
CTGGCAACTCATATTCAACT+GGG + Chr4:88786296-88786315 MsG0480023704.01.T01:CDS 40.0%
GAAACAGCAAGTTCATCATC+TGG - Chr4:88787453-88787472 None:intergenic 40.0%
GACCAATTCTTTGATGCGTA+AGG + Chr4:88784119-88784138 MsG0480023704.01.T01:CDS 40.0%
GCAGAAGAAATGAGTGAAGT+TGG - Chr4:88787429-88787448 None:intergenic 40.0%
GGATCAAGGATTGAACTTTC+AGG + Chr4:88786317-88786336 MsG0480023704.01.T01:CDS 40.0%
GTCCTGTCTTACTGTGTATT+TGG + Chr4:88784924-88784943 MsG0480023704.01.T01:intron 40.0%
GTTAAGTCCCACATAGCTTA+TGG + Chr4:88784521-88784540 MsG0480023704.01.T01:intron 40.0%
TAAAAGGCCTACAAGTGTGT+AGG - Chr4:88788284-88788303 None:intergenic 40.0%
TAACAATTCATGCGTTGGAC+CGG + Chr4:88784331-88784350 MsG0480023704.01.T01:intron 40.0%
TACACTGCACTTGAAAGGAA+GGG + Chr4:88785332-88785351 MsG0480023704.01.T01:intron 40.0%
TACCCATCCATAAGCTATGT+GGG - Chr4:88784531-88784550 None:intergenic 40.0%
TCACAGTTCTGTGATGAATG+GGG + Chr4:88786476-88786495 MsG0480023704.01.T01:CDS 40.0%
TGAAGAGAGAAAACTTGCAC+AGG - Chr4:88785505-88785524 None:intergenic 40.0%
TGAAGAGCTAAGTGTTTGCA+AGG + Chr4:88788810-88788829 MsG0480023704.01.T01:three_prime_UTR 40.0%
TGACATAAAACCCAGGGTTA+AGG + Chr4:88788860-88788879 MsG0480023704.01.T01:three_prime_UTR 40.0%
TGTCTTACTGTGTATTTGGG+TGG + Chr4:88784928-88784947 MsG0480023704.01.T01:intron 40.0%
TGTTATAAAACCCTAGGGGT+TGG + Chr4:88784300-88784319 MsG0480023704.01.T01:intron 40.0%
TTACCCATCCATAAGCTATG+TGG - Chr4:88784532-88784551 None:intergenic 40.0%
TTGAGGTGACATAAAACCCA+GGG + Chr4:88788854-88788873 MsG0480023704.01.T01:three_prime_UTR 40.0%
! AATTTTATCTCACCGTCCAC+TGG - Chr4:88784389-88784408 None:intergenic 40.0%
! ATAATGGAGTAATGCAGAGC+TGG + Chr4:88786277-88786296 MsG0480023704.01.T01:CDS 40.0%
! CGACAATCCTTTAGAAAAGG+TGG + Chr4:88785821-88785840 MsG0480023704.01.T01:intron 40.0%
! CGGTTTAGGTTTAAAAGGAG+TGG + Chr4:88784743-88784762 MsG0480023704.01.T01:intron 40.0%
! CTGCTAATGATGATAATGCC+TGG + Chr4:88784142-88784161 MsG0480023704.01.T01:CDS 40.0%
! GGTGTTAGAGAGTGTGTTAT+CGG + Chr4:88788390-88788409 MsG0480023704.01.T01:intron 40.0%
! TCTGATACTGGTGTTAGAGA+CGG + Chr4:88786551-88786570 MsG0480023704.01.T01:three_prime_UTR 40.0%
! TCTTCGAGTTCCATAATGGA+CGG + Chr4:88786436-88786455 MsG0480023704.01.T01:CDS 40.0%
!! AGGATTGAACTTTCAGGTTC+GGG + Chr4:88786323-88786342 MsG0480023704.01.T01:CDS 40.0%
!! GATTTGAGCTAGCATTGGTT+TGG - Chr4:88788673-88788692 None:intergenic 40.0%
!! TTTCGGCAATGAGTCGTTTT+TGG + Chr4:88785172-88785191 MsG0480023704.01.T01:CDS 40.0%
!!! CCTCAGGAGAACTTTTTTCA+GGG + Chr4:88785226-88785245 MsG0480023704.01.T01:CDS 40.0%
!!! GGAGAACTTTTTTCAGGGTA+TGG + Chr4:88785231-88785250 MsG0480023704.01.T01:intron 40.0%
!!! GTAGCTGGCCATGATTTTTT+TGG - Chr4:88787375-88787394 None:intergenic 40.0%
AAAACCCAGGGTTAAGGAAG+AGG + Chr4:88788866-88788885 MsG0480023704.01.T01:three_prime_UTR 45.0%
AAACCCAGGGTTAAGGAAGA+GGG + Chr4:88788867-88788886 MsG0480023704.01.T01:three_prime_UTR 45.0%
AACTTTCTATGGAGGGGTGA+AGG + Chr4:88784480-88784499 MsG0480023704.01.T01:intron 45.0%
ACAGAGGGCAGTTACAGTAA+CGG - Chr4:88783827-88783846 None:intergenic 45.0%
ACTTTCTATGGAGGGGTGAA+GGG + Chr4:88784481-88784500 MsG0480023704.01.T01:intron 45.0%
AGAAACACCACCGTTCAAGT+AGG - Chr4:88783959-88783978 None:intergenic 45.0%
AGAGAGCGATGAAGAAACAG+AGG - Chr4:88783843-88783862 None:intergenic 45.0%
AGCCCTGTTTCGACATGATT+GGG + Chr4:88784624-88784643 MsG0480023704.01.T01:intron 45.0%
AGTCCCACATAGCTTATGGA+TGG + Chr4:88784525-88784544 MsG0480023704.01.T01:intron 45.0%
ATGTCACCTCAATGAAGCAG+TGG - Chr4:88788846-88788865 None:intergenic 45.0%
ATTGCAACAGTTCCTGGCTT+TGG + Chr4:88787650-88787669 MsG0480023704.01.T01:three_prime_UTR 45.0%
CAGGTGTTTGGGTCAAGTAT+AGG + Chr4:88784663-88784682 MsG0480023704.01.T01:intron 45.0%
CATGGCCTGTATGCCTTTAT+AGG - Chr4:88787683-88787702 None:intergenic 45.0%
CATTGAAAGACGACACAGAC+TGG - Chr4:88784100-88784119 None:intergenic 45.0%
CCCTGAAAAAAGTTCTCCTG+AGG - Chr4:88785229-88785248 None:intergenic 45.0%
CCTACAAGTGTGTAGGCTAA+GGG - Chr4:88788277-88788296 None:intergenic 45.0%
CGGTGGTGTTTCTCAAATGA+CGG + Chr4:88783966-88783985 MsG0480023704.01.T01:CDS 45.0%
CTATACTTGACCCAAACACC+TGG - Chr4:88784665-88784684 None:intergenic 45.0%
GAAACACCACCGTTCAAGTA+GGG - Chr4:88783958-88783977 None:intergenic 45.0%
GACTTGGAGTCAGTTACAGT+TGG - Chr4:88787794-88787813 None:intergenic 45.0%
GAGAAAGGATGCAATGGTGA+GGG + Chr4:88787611-88787630 MsG0480023704.01.T01:three_prime_UTR 45.0%
GAGAGCGATGAAGAAACAGA+GGG - Chr4:88783842-88783861 None:intergenic 45.0%
GATAGCGTTAGACCAAGCAA+TGG + Chr4:88785069-88785088 MsG0480023704.01.T01:CDS 45.0%
GCGAGACTTGTGAAAAACCA+AGG + Chr4:88786787-88786806 MsG0480023704.01.T01:three_prime_UTR 45.0%
GCTGGCAACTCATATTCAAC+TGG + Chr4:88786295-88786314 MsG0480023704.01.T01:CDS 45.0%
GCTGTTGTACCCTACTTGAA+CGG + Chr4:88783946-88783965 MsG0480023704.01.T01:CDS 45.0%
GGACTTAACCACTCACACTT+GGG - Chr4:88784510-88784529 None:intergenic 45.0%
GTCCCACATAGCTTATGGAT+GGG + Chr4:88784526-88784545 MsG0480023704.01.T01:intron 45.0%
GTGGAGCAACAAATTGTGCA+TGG + Chr4:88786501-88786520 MsG0480023704.01.T01:CDS 45.0%
GTGTATTTGGGTGGTTACTC+AGG + Chr4:88784937-88784956 MsG0480023704.01.T01:intron 45.0%
GTGTTTGGGTCAAGTATAGG+AGG + Chr4:88784666-88784685 MsG0480023704.01.T01:intron 45.0%
TAATGGAGCAGAGCAGTTGT+GGG + Chr4:88783569-88783588 MsG0480023704.01.T01:five_prime_UTR 45.0%
TATCGGCACTCAAGCACTAT+TGG + Chr4:88788407-88788426 MsG0480023704.01.T01:intron 45.0%
TCCCCAATCATGTCGAAACA+GGG - Chr4:88784629-88784648 None:intergenic 45.0%
TGAGAAAGGATGCAATGGTG+AGG + Chr4:88787610-88787629 MsG0480023704.01.T01:three_prime_UTR 45.0%
TGGATGGAAAAGATTACCCG+TGG + Chr4:88786745-88786764 MsG0480023704.01.T01:three_prime_UTR 45.0%
TGGATGGTACCTCTGTTTAG+TGG - Chr4:88787493-88787512 None:intergenic 45.0%
TTCTGTGATGAATGGGGATG+TGG + Chr4:88786482-88786501 MsG0480023704.01.T01:CDS 45.0%
TTGGGTCAAGTATAGGAGGT+GGG + Chr4:88784670-88784689 MsG0480023704.01.T01:intron 45.0%
TTTCGACATGATTGGGGAGT+GGG + Chr4:88784631-88784650 MsG0480023704.01.T01:intron 45.0%
TTTGGGTCAAGTATAGGAGG+TGG + Chr4:88784669-88784688 MsG0480023704.01.T01:intron 45.0%
! AACTCCTTTTTACTCGGGCA+GGG - Chr4:88787127-88787146 None:intergenic 45.0%
! AGGGTATTTCATTGTGCTGG+TGG + Chr4:88785919-88785938 MsG0480023704.01.T01:intron 45.0%
! ATAATGGAGCAGAGCAGTTG+TGG + Chr4:88783568-88783587 MsG0480023704.01.T01:five_prime_UTR 45.0%
! CAGTTGCAGTGCTTTGTTGA+CGG - Chr4:88783907-88783926 None:intergenic 45.0%
! CTGATACTGGTGTTAGAGAC+GGG + Chr4:88786552-88786571 MsG0480023704.01.T01:three_prime_UTR 45.0%
! CTGTAACTGACTCCAAGTCA+AGG + Chr4:88787795-88787814 MsG0480023704.01.T01:three_prime_UTR 45.0%
! GAAGTTGGAGAGCATAGTGT+GGG - Chr4:88787414-88787433 None:intergenic 45.0%
! GGTAGGGTATTTCATTGTGC+TGG + Chr4:88785916-88785935 MsG0480023704.01.T01:intron 45.0%
! TAACTCCTTTTTACTCGGGC+AGG - Chr4:88787128-88787147 None:intergenic 45.0%
! TCAAATGACGGAGATCAGTC+CGG + Chr4:88783978-88783997 MsG0480023704.01.T01:CDS 45.0%
! TGAAGTTGGAGAGCATAGTG+TGG - Chr4:88787415-88787434 None:intergenic 45.0%
! TGATACTGGTGTTAGAGACG+GGG + Chr4:88786553-88786572 MsG0480023704.01.T01:three_prime_UTR 45.0%
!! GAAGTTTTTGGATGGCCACT+AGG + Chr4:88785397-88785416 MsG0480023704.01.T01:intron 45.0%
!! GATGATGGAGGAACTTGTTC+CGG + Chr4:88784038-88784057 MsG0480023704.01.T01:CDS 45.0%
!! GGTTTTGACAGACATGGCTT+GGG + Chr4:88786359-88786378 MsG0480023704.01.T01:CDS 45.0%
!! TTCTAGTTCCAGTAGCAGTG+TGG + Chr4:88786861-88786880 MsG0480023704.01.T01:three_prime_UTR 45.0%
!! TTGAGCTAGCATTGGTTTGG+AGG - Chr4:88788670-88788689 None:intergenic 45.0%
!!! GCCTCAGGAGAACTTTTTTC+AGG + Chr4:88785225-88785244 MsG0480023704.01.T01:CDS 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + Chr4:88784595-88784614 MsG0480023704.01.T01:intron 45.0%
!! CAAAATAAAAAATAAAAAAT+AGG - Chr4:88788013-88788032 None:intergenic 5.0%
!!! CTATTTTTTATTTTTTATTT+TGG + Chr4:88788011-88788030 MsG0480023704.01.T01:intron 5.0%
AACAGCGGTTGCAAAGCATG+TGG + Chr4:88787575-88787594 MsG0480023704.01.T01:intron 50.0%
AACCCAGGGTTAAGGAAGAG+GGG + Chr4:88788868-88788887 MsG0480023704.01.T01:three_prime_UTR 50.0%
AAGGATGCAATGGTGAGGGT+AGG + Chr4:88787615-88787634 MsG0480023704.01.T01:three_prime_UTR 50.0%
AATGGTGAGGGTAGGATGCA+GGG + Chr4:88787623-88787642 MsG0480023704.01.T01:three_prime_UTR 50.0%
AATTCATGCGTTGGACCGGT+CGG + Chr4:88784335-88784354 MsG0480023704.01.T01:intron 50.0%
ACGGCGTGAATCTTCTTCTG+AGG - Chr4:88783888-88783907 None:intergenic 50.0%
AGGAAAAGAAAGAGGGGAGG+AGG - Chr4:88785880-88785899 None:intergenic 50.0%
AGGTCAGGTGGATGTCTACT+AGG - Chr4:88785860-88785879 None:intergenic 50.0%
CAAGTAGGGTACAACAGCGT+CGG - Chr4:88783944-88783963 None:intergenic 50.0%
CCATGTACCACCGTCCATTA+TGG - Chr4:88786449-88786468 None:intergenic 50.0%
CCCTTAGCCTACACACTTGT+AGG + Chr4:88788274-88788293 MsG0480023704.01.T01:intron 50.0%
CGACGATCAGCCAAAACAAC+CGG - Chr4:88784006-88784025 None:intergenic 50.0%
CGGCGTGAATCTTCTTCTGA+GGG - Chr4:88783887-88783906 None:intergenic 50.0%
CTCCCCAATCATGTCGAAAC+AGG - Chr4:88784630-88784649 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCT+CGG - Chr4:88787267-88787286 None:intergenic 50.0%
CTGGAAAGCCCTCTATCACA+AGG + Chr4:88784161-88784180 MsG0480023704.01.T01:CDS 50.0%
CTTAACCACTCACACTTGGG+AGG - Chr4:88784507-88784526 None:intergenic 50.0%
CTTGTGATAGAGGGCTTTCC+AGG - Chr4:88784163-88784182 None:intergenic 50.0%
CTTTGGCTGGTGGCCTATAA+AGG + Chr4:88787667-88787686 MsG0480023704.01.T01:three_prime_UTR 50.0%
GAAGCCACAAATCCAGGACA+TGG - Chr4:88787701-88787720 None:intergenic 50.0%
GAGCCCTGTTTCGACATGAT+TGG + Chr4:88784623-88784642 MsG0480023704.01.T01:intron 50.0%
GATTTGTGGCTTCTGGTGGT+AGG + Chr4:88787708-88787727 MsG0480023704.01.T01:three_prime_UTR 50.0%
GCCCTGTTTCGACATGATTG+GGG + Chr4:88784625-88784644 MsG0480023704.01.T01:intron 50.0%
GCCTACAAGTGTGTAGGCTA+AGG - Chr4:88788278-88788297 None:intergenic 50.0%
GGGACTTAACCACTCACACT+TGG - Chr4:88784511-88784530 None:intergenic 50.0%
GGTGGTATTGCAACAGTTCC+TGG + Chr4:88787644-88787663 MsG0480023704.01.T01:three_prime_UTR 50.0%
GTGAGGAAAAGAAAGAGGGG+AGG - Chr4:88785883-88785902 None:intergenic 50.0%
GTTGTACCCTACTTGAACGG+TGG + Chr4:88783949-88783968 MsG0480023704.01.T01:CDS 50.0%
GTTTCGACATGATTGGGGAG+TGG + Chr4:88784630-88784649 MsG0480023704.01.T01:intron 50.0%
TAAGCCTTCCACCCATTGCT+TGG - Chr4:88785084-88785103 None:intergenic 50.0%
TACCAGCCACTGCTTCATTG+AGG + Chr4:88788837-88788856 MsG0480023704.01.T01:three_prime_UTR 50.0%
TACGCACGCGCTTAGTTACT+TGG + Chr4:88784068-88784087 MsG0480023704.01.T01:CDS 50.0%
TAGACCAAGCAATGGGTGGA+AGG + Chr4:88785077-88785096 MsG0480023704.01.T01:CDS 50.0%
TCTCTCTCTCTCTCTCTCTC+GGG - Chr4:88787266-88787285 None:intergenic 50.0%
TGTCCTGGATTTGTGGCTTC+TGG + Chr4:88787701-88787720 MsG0480023704.01.T01:three_prime_UTR 50.0%
! GGAGTGGATTCCAGGTGTTT+GGG + Chr4:88784652-88784671 MsG0480023704.01.T01:intron 50.0%
! GGTGGCCTATAAAGGCATAC+AGG + Chr4:88787675-88787694 MsG0480023704.01.T01:three_prime_UTR 50.0%
!! CCATAATGGACGGTGGTACA+TGG + Chr4:88786446-88786465 MsG0480023704.01.T01:CDS 50.0%
!! GGGTTTTGACAGACATGGCT+TGG + Chr4:88786358-88786377 MsG0480023704.01.T01:CDS 50.0%
!! TCGAGTTCCATAATGGACGG+TGG + Chr4:88786439-88786458 MsG0480023704.01.T01:CDS 50.0%
!! TGCTCGGGTTTTGACAGACA+TGG + Chr4:88786353-88786372 MsG0480023704.01.T01:CDS 50.0%
!!! TGTTTTGGCTGATCGTCGCA+CGG + Chr4:88784008-88784027 MsG0480023704.01.T01:CDS 50.0%
AAACCAAGGCTGCGCAGTTG+CGG + Chr4:88786801-88786820 MsG0480023704.01.T01:three_prime_UTR 55.0%
AAGAAAGAGGGGAGGAGGTC+AGG - Chr4:88785875-88785894 None:intergenic 55.0%
AAGGCATACAGGCCATGTCC+TGG + Chr4:88787686-88787705 MsG0480023704.01.T01:three_prime_UTR 55.0%
ACAGGGACAAAGCATGGACG+AGG + Chr4:88787739-88787758 MsG0480023704.01.T01:three_prime_UTR 55.0%
ACAGTAACGGCGAGGAGGAA+GGG - Chr4:88783814-88783833 None:intergenic 55.0%
ACATGATTGGGGAGTGGGAG+TGG + Chr4:88784636-88784655 MsG0480023704.01.T01:intron 55.0%
AGCATGGACGAGGTTGTCTC+CGG + Chr4:88787749-88787768 MsG0480023704.01.T01:three_prime_UTR 55.0%
AGCGCGTGCGTAGTAATCTC+CGG - Chr4:88784060-88784079 None:intergenic 55.0%
AGGTGGGAACTCACACTGTC+TGG + Chr4:88784686-88784705 MsG0480023704.01.T01:intron 55.0%
AGGTTCGGGATGTACGTGCT+CGG + Chr4:88786337-88786356 MsG0480023704.01.T01:CDS 55.0%
ATTCATGCGTTGGACCGGTC+GGG + Chr4:88784336-88784355 MsG0480023704.01.T01:intron 55.0%
CAATGGTGAGGGTAGGATGC+AGG + Chr4:88787622-88787641 MsG0480023704.01.T01:three_prime_UTR 55.0%
CACCTCAATGAAGCAGTGGC+TGG - Chr4:88788842-88788861 None:intergenic 55.0%
CAGACGACAGGGACAAAGCA+TGG + Chr4:88787733-88787752 MsG0480023704.01.T01:three_prime_UTR 55.0%
CAGGCCATGTCCTGGATTTG+TGG + Chr4:88787694-88787713 MsG0480023704.01.T01:three_prime_UTR 55.0%
CAGTTACAGTAACGGCGAGG+AGG - Chr4:88783819-88783838 None:intergenic 55.0%
CCACCAGAAGCCACAAATCC+AGG - Chr4:88787707-88787726 None:intergenic 55.0%
CCTGGATTTGTGGCTTCTGG+TGG + Chr4:88787704-88787723 MsG0480023704.01.T01:three_prime_UTR 55.0%
CTCTCTCTCTCTCTCTCTCG+GGG - Chr4:88787265-88787284 None:intergenic 55.0%
GAAGCTGAACAAACCCCGAC+CGG - Chr4:88784353-88784372 None:intergenic 55.0%
GCGTTAGACCAAGCAATGGG+TGG + Chr4:88785073-88785092 MsG0480023704.01.T01:CDS 55.0%
GGTGGTAGGTACAGACGACA+GGG + Chr4:88787722-88787741 MsG0480023704.01.T01:three_prime_UTR 55.0%
TACAGTAACGGCGAGGAGGA+AGG - Chr4:88783815-88783834 None:intergenic 55.0%
TAGCAGTTGGCCAACCCCTA+GGG - Chr4:88784313-88784332 None:intergenic 55.0%
TATCTCACCGTCCACTGGCA+GGG - Chr4:88784384-88784403 None:intergenic 55.0%
TCGCACGGGTTCTTCGATGA+TGG + Chr4:88784023-88784042 MsG0480023704.01.T01:CDS 55.0%
TGCCCCTCTTCCTTAACCCT+GGG - Chr4:88788873-88788892 None:intergenic 55.0%
TGGTGGTAGGTACAGACGAC+AGG + Chr4:88787721-88787740 MsG0480023704.01.T01:three_prime_UTR 55.0%
TTAGCAGTTGGCCAACCCCT+AGG - Chr4:88784314-88784333 None:intergenic 55.0%
TTATCTCACCGTCCACTGGC+AGG - Chr4:88784385-88784404 None:intergenic 55.0%
TTCAATTGAGCCCCTGCCAG+TGG + Chr4:88784370-88784389 MsG0480023704.01.T01:intron 55.0%
TTGCCCCTCTTCCTTAACCC+TGG - Chr4:88788874-88788893 None:intergenic 55.0%
! AGAGCAGTTGTGGGCGTTGT+CGG + Chr4:88783578-88783597 MsG0480023704.01.T01:five_prime_UTR 55.0%
! CACGGGTTCTTCGATGATGG+AGG + Chr4:88784026-88784045 MsG0480023704.01.T01:CDS 55.0%
! GGGAGTGGATTCCAGGTGTT+TGG + Chr4:88784651-88784670 MsG0480023704.01.T01:intron 55.0%
! GGGTACAACAGCGTCGGAAT+TGG - Chr4:88783938-88783957 None:intergenic 55.0%
! GTTGGAGAGCATAGTGTGGG+AGG - Chr4:88787411-88787430 None:intergenic 55.0%
!! CAACAGTTCCTGGCTTTGGC+TGG + Chr4:88787654-88787673 MsG0480023704.01.T01:three_prime_UTR 55.0%
!!! GTTTTGGCTGATCGTCGCAC+GGG + Chr4:88784009-88784028 MsG0480023704.01.T01:CDS 55.0%
AAAGAGGGGAGGAGGTCAGG+TGG - Chr4:88785872-88785891 None:intergenic 60.0%
AACCAAGGCTGCGCAGTTGC+GGG + Chr4:88786802-88786821 MsG0480023704.01.T01:three_prime_UTR 60.0%
AACGGCGAGGAGGAAGGGTT+GGG - Chr4:88783809-88783828 None:intergenic 60.0%
AAGGGCCTCCCAAGTGTGAG+TGG + Chr4:88784499-88784518 MsG0480023704.01.T01:intron 60.0%
ATAGGCCACCAGCCAAAGCC+AGG - Chr4:88787665-88787684 None:intergenic 60.0%
ATCTCACCGTCCACTGGCAG+GGG - Chr4:88784383-88784402 None:intergenic 60.0%
ATTGAGCCCCTGCCAGTGGA+CGG + Chr4:88784374-88784393 MsG0480023704.01.T01:intron 60.0%
GACGAGGTTGTCTCCGGTAG+TGG + Chr4:88787755-88787774 MsG0480023704.01.T01:three_prime_UTR 60.0%
GGCACCCTGCCCGAGTAAAA+AGG + Chr4:88787120-88787139 MsG0480023704.01.T01:three_prime_UTR 60.0%
GGGCAGTTACAGTAACGGCG+AGG - Chr4:88783822-88783841 None:intergenic 60.0%
GGTTCGGGATGTACGTGCTC+GGG + Chr4:88786338-88786357 MsG0480023704.01.T01:CDS 60.0%
GTGAAGTGCGTCCATGCCTC+AGG + Chr4:88785210-88785229 MsG0480023704.01.T01:CDS 60.0%
TAACGGCGAGGAGGAAGGGT+TGG - Chr4:88783810-88783829 None:intergenic 60.0%
TCAGCCAAAACAACCGGCGC+CGG - Chr4:88784000-88784019 None:intergenic 60.0%
TTCATGCGTTGGACCGGTCG+GGG + Chr4:88784337-88784356 MsG0480023704.01.T01:intron 60.0%
! GAGCAGTTGTGGGCGTTGTC+GGG + Chr4:88783579-88783598 MsG0480023704.01.T01:five_prime_UTR 60.0%
!! CAGTTCCTGGCTTTGGCTGG+TGG + Chr4:88787657-88787676 MsG0480023704.01.T01:three_prime_UTR 60.0%
GGTGAGGGTAGGATGCAGGG+TGG + Chr4:88787626-88787645 MsG0480023704.01.T01:three_prime_UTR 65.0%
! GGGGAGTGGGAGTGGATTCC+AGG + Chr4:88784644-88784663 MsG0480023704.01.T01:intron 65.0%
!!! CAGTCCGGCGCCGGTTGTTT+TGG + Chr4:88783993-88784012 MsG0480023704.01.T01:CDS 65.0%
CTCCCGCAACTGCGCAGCCT+TGG - Chr4:88786807-88786826 None:intergenic 70.0%
GACGGAGATCAGTCCGGCGC+CGG + Chr4:88783984-88784003 MsG0480023704.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 88783563 88789138 88783563 ID=MsG0480023704.01;Name=MsG0480023704.01
Chr4 mRNA 88783563 88789138 88783563 ID=MsG0480023704.01.T01;Parent=MsG0480023704.01;Name=MsG0480023704.01.T01;_AED=0.48;_eAED=0.48;_QI=221|1|1|1|0.4|0.33|6|1539|282
Chr4 exon 88783563 88784182 88783563 ID=MsG0480023704.01.T01:exon:12989;Parent=MsG0480023704.01.T01
Chr4 exon 88785051 88785247 88785051 ID=MsG0480023704.01.T01:exon:12990;Parent=MsG0480023704.01.T01
Chr4 exon 88786275 88787290 88786275 ID=MsG0480023704.01.T01:exon:12991;Parent=MsG0480023704.01.T01
Chr4 exon 88787319 88787502 88787319 ID=MsG0480023704.01.T01:exon:12992;Parent=MsG0480023704.01.T01
Chr4 exon 88788784 88789138 88788784 ID=MsG0480023704.01.T01:exon:12994;Parent=MsG0480023704.01.T01
Chr4 five_prime_UTR 88783563 88783783 88783563 ID=MsG0480023704.01.T01:five_prime_utr;Parent=MsG0480023704.01.T01
Chr4 CDS 88783784 88784182 88783784 ID=MsG0480023704.01.T01:cds;Parent=MsG0480023704.01.T01
Chr4 CDS 88785051 88785247 88785051 ID=MsG0480023704.01.T01:cds;Parent=MsG0480023704.01.T01
Chr4 CDS 88786275 88786527 88786275 ID=MsG0480023704.01.T01:cds;Parent=MsG0480023704.01.T01
Chr4 three_prime_UTR 88786528 88787290 88786528 ID=MsG0480023704.01.T01:three_prime_utr;Parent=MsG0480023704.01.T01
Chr4 three_prime_UTR 88787319 88787502 88787319 ID=MsG0480023704.01.T01:three_prime_utr;Parent=MsG0480023704.01.T01
Chr4 three_prime_UTR 88787580 88787816 88787580 ID=MsG0480023704.01.T01:three_prime_utr;Parent=MsG0480023704.01.T01
Chr4 three_prime_UTR 88788784 88789138 88788784 ID=MsG0480023704.01.T01:three_prime_utr;Parent=MsG0480023704.01.T01
Chr4 mRNA 88787294 88788820 88787294 ID=MsG0480023704.01.T02;Parent=MsG0480023704.01;Name=MsG0480023704.01.T02;_AED=0.50;_eAED=0.53;_QI=15|0.5|0.66|1|0|0|3|0|165
Chr4 exon 88787294 88787502 88787294 ID=MsG0480023704.01.T02:exon:12995;Parent=MsG0480023704.01.T02
Chr4 exon 88788754 88788820 88788754 ID=MsG0480023704.01.T02:exon:12996;Parent=MsG0480023704.01.T02
Chr4 five_prime_UTR 88787294 88787308 88787294 ID=MsG0480023704.01.T02:five_prime_utr;Parent=MsG0480023704.01.T02
Chr4 CDS 88787309 88787502 88787309 ID=MsG0480023704.01.T02:cds;Parent=MsG0480023704.01.T02
Chr4 CDS 88787580 88787816 88787580 ID=MsG0480023704.01.T02:cds;Parent=MsG0480023704.01.T02
Chr4 CDS 88788754 88788820 88788754 ID=MsG0480023704.01.T02:cds;Parent=MsG0480023704.01.T02
Gene Sequence

>MsG0480023704.01.T01

ATGGATATTTTCTCTAACTTCTCCCAACCCTTCCTCCTCGCCGTTACTGTAACTGCCCTCTGTTTCTTCATCGCTCTCTTCTCTTTCTTTCGAACATTCTCCCTCAGAAGAAGATTCACGCCGTCAACAAAGCACTGCAACTGCGCTTCTTCCAATTCCGACGCTGTTGTACCCTACTTGAACGGTGGTGTTTCTCAAATGACGGAGATCAGTCCGGCGCCGGTTGTTTTGGCTGATCGTCGCACGGGTTCTTCGATGATGGAGGAACTTGTTCCGGAGATTACTACGCACGCGCTTAGTTACTTGGATTATCCCAGTCTGTGTCGTCTTTCAATGACCAATTCTTTGATGCGTAAGGCTGCTAATGATGATAATGCCTGGAAAGCCCTCTATCACAAGGACTTCACATTGGAACAAGATAGCGTTAGACCAAGCAATGGGTGGAAGGCTTACTATGCTGCCACAAGAGCAATTGTGATTGTTAATACAGAATTCTTCAATATTTTAAGAGATAAGTCCATTTCGGCAATGAGTCGTTTTTGGCTTAACGCAGATTATGTGAAGTGCGTCCATGCCTCAGGAGAACTTTTTTCAGGGTATAATGGAGTAATGCAGAGCTGGCAACTCATATTCAACTGGGATCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGGGTTTTGACAGACATGGCTTGGGTTACCATGAAAACATATGTTGACATGGATACAGGGCCATTCAATGTGACCAATGTCTTCGAGTTCCATAATGGACGGTGGTACATGGTTCATCATCACAGTTCTGTGATGAATGGGGATGTGGAGCAACAAATTGTGCATGGATAA

>MsG0480023704.01.T02

ATGACAACAGCTTTCTTCACAGTTCCAACACCTCAACATTATCATCACGTTCAATTGTACAAACCAAAAAAATCATGGCCAGCTACTAAGATATTTGTTCCTCCCACACTATGCTCTCCAACTTCACTCATTTCTTCTGCACCAGATGATGAACTTGCTGTTTCTGATCAATCAGAATTCTCCACTAAACAGAGCGGTTGCAAAGCATGTGGAAACGAAGAAATTGAGAAAGGATGCAATGGTGAGGGTAGGATGCAGGGTGGTATTGCAACAGTTCCTGGCTTTGGCTGGTGGCCTATAAAGGCATACAGGCCATGTCCTGGATTTGTGGCTTCTGGTGGTAGGTACAGACGACAGGGACAAAGCATGGACGAGGTTGTCTCCGGTAGTGGCAAAATTAAAACACCAACTGTAACTGACTCCAAGTCAAGTATAATATATCATGGAGCCAAATTTTGCAGTAACAAAAAGGATGGATCGAACAAATTGAAGAGCTAA

Protein sequence

>MsG0480023704.01.T01

MDIFSNFSQPFLLAVTVTALCFFIALFSFFRTFSLRRRFTPSTKHCNCASSNSDAVVPYLNGGVSQMTEISPAPVVLADRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVRPSNGWKAYYAATRAIVIVNTEFFNILRDKSISAMSRFWLNADYVKCVHASGELFSGYNGVMQSWQLIFNWDQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGDVEQQIVHG*

>MsG0480023704.01.T02

MTTAFFTVPTPQHYHHVQLYKPKKSWPATKIFVPPTLCSPTSLISSAPDDELAVSDQSEFSTKQSGCKACGNEEIEKGCNGEGRMQGGIATVPGFGWWPIKAYRPCPGFVASGGRYRRQGQSMDEVVSGSGKIKTPTVTDSKSSIIYHGAKFCSNKKDGSNKLKS*