AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020269.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020269.01.T01 MTR_4g045783 67.773 211 15 2 6 216 1 158 3.22e-88 257
MsG0480020269.01.T01 MTR_4g045783 63.068 176 12 2 6 181 1 123 1.78e-62 191
MsG0480020269.01.T01 MTR_1g112990 53.704 54 25 0 147 200 140 193 5.40e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020269.01.T01 AT1G68730 38.942 208 73 5 9 216 17 170 3.44e-32 115
MsG0480020269.01.T01 AT5G27280 35.714 140 87 2 65 203 36 173 8.82e-16 73.6

Find 52 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGAGAAATGTTTGATTC+TGG 0.292832 4:+37839641 None:intergenic
CATAACGGAGTATGACTTTC+GGG 0.332036 4:-37833563 MsG0480020269.01.T01:CDS
CACAAATTAGTTGACAATCT+TGG 0.332172 4:-37833589 MsG0480020269.01.T01:CDS
CTTCTATTAAACCTTCTTCC+AGG 0.344863 4:-37839769 MsG0480020269.01.T01:CDS
CGCCGAGTACTTAGAGTTCA+TGG 0.349858 4:-37839698 MsG0480020269.01.T01:CDS
AAATGTTTGATTCTGGTAAA+GGG 0.364073 4:+37839648 None:intergenic
CACCCCTTTCATAAGCTAAT+CGG 0.364776 4:+37837351 None:intergenic
ATCATTGATTATTGAATCAA+TGG 0.375525 4:-37839891 None:intergenic
TAGAAGGAGGGTTGAAACAG+AGG 0.382999 4:+37839786 None:intergenic
CTATTATACTTTGCATATGC+AGG 0.385690 4:-37837465 MsG0480020269.01.T01:CDS
ACAGAGGGAGAGATTAGGTT+GGG 0.395285 4:+37839802 None:intergenic
GAAATGTTTGATTCTGGTAA+AGG 0.399164 4:+37839647 None:intergenic
CTCTAAGTACTCGGCGCCGA+TGG 0.405657 4:+37839705 None:intergenic
CTGGAAGAAGGTTTAATAGA+AGG 0.410334 4:+37839770 None:intergenic
AGAATCAAACATTTCTCAAC+CGG 0.435466 4:-37839639 MsG0480020269.01.T01:intron
TCATAACGGAGTATGACTTT+CGG 0.437534 4:-37833564 MsG0480020269.01.T01:CDS
CTTAGAGTTCATGGTTTGCT+TGG 0.438729 4:-37839689 MsG0480020269.01.T01:CDS
TTGAAACAGAGGGAGAGATT+AGG 0.459683 4:+37839797 None:intergenic
CAAAGTCTTGACCTGGAAGA+AGG 0.468809 4:+37839758 None:intergenic
AGAAGGAGGGTTGAAACAGA+GGG 0.482790 4:+37839787 None:intergenic
TGTACAAGCAAACTTCGTCT+TGG 0.492307 4:+37837419 None:intergenic
GAGGAATAAGTAAAGAGCGT+TGG 0.493073 4:+37839845 None:intergenic
AAACCGATTAGCTTATGAAA+GGG 0.495176 4:-37837354 MsG0480020269.01.T01:CDS
AGTTCCTCTTACTAGTGTGC+AGG 0.498707 4:-37833625 MsG0480020269.01.T01:intron
GCACGGACACTCCTCGGATT+AGG 0.500151 4:+37839152 None:intergenic
TCTAAGTACTCGGCGCCGAT+GGG 0.500386 4:+37839706 None:intergenic
CATAGGTTTCGTGTCGGTGT+CGG 0.504301 4:-37839201 MsG0480020269.01.T01:intron
CAGAGGGAGAGATTAGGTTG+GGG 0.520699 4:+37839803 None:intergenic
TAAACCGATTAGCTTATGAA+AGG 0.524849 4:-37837355 MsG0480020269.01.T01:CDS
AACAGAGGGAGAGATTAGGT+TGG 0.528985 4:+37839801 None:intergenic
CAAGCAATGAAACACGGATA+CGG 0.531254 4:+37839088 None:intergenic
CTCGGATTAGGCGTGTCCCT+CGG 0.536351 4:+37839164 None:intergenic
GAAGAAGGTTTAATAGAAGG+AGG 0.539502 4:+37839773 None:intergenic
AAGAAGGTTTAATAGAAGGA+GGG 0.551630 4:+37839774 None:intergenic
AATGTTTGATTCTGGTAAAG+GGG 0.555410 4:+37839649 None:intergenic
TATTATACTTTGCATATGCA+GGG 0.569304 4:-37837464 MsG0480020269.01.T01:CDS
TGACAATCTTGGACTCATAA+CGG 0.571059 4:-37833578 MsG0480020269.01.T01:CDS
AATGAAACACGGATACGGAC+GGG 0.576463 4:+37839093 None:intergenic
TATGAAGCACGGACACTCCT+CGG 0.576801 4:+37839146 None:intergenic
TGCCACAAAAGCTTCCCCAT+CGG 0.579404 4:-37839721 MsG0480020269.01.T01:CDS
AACCATGAACTCTAAGTACT+CGG 0.579508 4:+37839696 None:intergenic
CAATGAAACACGGATACGGA+CGG 0.612129 4:+37839092 None:intergenic
ACTGAATTGTGTCAGTGTCA+AGG 0.612187 4:-37839121 MsG0480020269.01.T01:CDS
TGTAATCATAGGTTTCGTGT+CGG 0.631335 4:-37839207 MsG0480020269.01.T01:intron
CAATTCAGTGCTATGAAGCA+CGG 0.635574 4:+37839135 None:intergenic
AACCGATTAGCTTATGAAAG+GGG 0.639818 4:-37837353 MsG0480020269.01.T01:CDS
GGCAACACAAAGTCTTGACC+TGG 0.640860 4:+37839751 None:intergenic
CGGACACTGACACGTGTCCG+AGG 0.650981 4:-37839181 MsG0480020269.01.T01:CDS
CTAAGTACTCGGCGCCGATG+GGG 0.651454 4:+37839707 None:intergenic
CGAGGGACACGCCTAATCCG+AGG 0.653018 4:-37839163 MsG0480020269.01.T01:CDS
GGACACTGACACGTGTCCGA+GGG 0.659724 4:-37839180 MsG0480020269.01.T01:CDS
TGTGCGATGAAAGAACAGAG+AGG 0.758097 4:-37837382 MsG0480020269.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATCTATAAATTTGTA+TGG - Chr4:37835089-37835108 MsG0480020269.01.T01:intron 10.0%
!! GATCTTTATATATATATTTA+GGG - Chr4:37835535-37835554 MsG0480020269.01.T01:intron 10.0%
!! TGATCTTTATATATATATTT+AGG - Chr4:37835534-37835553 MsG0480020269.01.T01:intron 10.0%
!!! ATGTATATTTTTATAAAAGT+TGG - Chr4:37834472-37834491 MsG0480020269.01.T01:intron 10.0%
!!! GTTTATTGATTAAATTTTTA+TGG - Chr4:37835482-37835501 MsG0480020269.01.T01:intron 10.0%
!!! TAATTATGAATATGAATTTT+GGG - Chr4:37838290-37838309 MsG0480020269.01.T01:intron 10.0%
!!! TGTATATTTTTATAAAAGTT+GGG - Chr4:37834473-37834492 MsG0480020269.01.T01:intron 10.0%
!! ATATAATTTAGTGTAATCAT+AGG - Chr4:37834194-37834213 MsG0480020269.01.T01:intron 15.0%
!! ATATGATTAAACATATACAT+TGG + Chr4:37836141-37836160 None:intergenic 15.0%
!! ATATTTATTATACATTGAGT+CGG + Chr4:37836389-37836408 None:intergenic 15.0%
!! CAAGAAAATATGATTAATAT+AGG + Chr4:37835855-37835874 None:intergenic 15.0%
!! TAAATAGTTGTGAAAATAAT+TGG + Chr4:37835748-37835767 None:intergenic 15.0%
!! TATATATAAAGATCAAAAGT+AGG + Chr4:37835529-37835548 None:intergenic 15.0%
!! TATTAAAGTGTGAAAAATAA+GGG + Chr4:37836902-37836921 None:intergenic 15.0%
!! TGAATAAACTATTTATCAAA+CGG - Chr4:37834937-37834956 MsG0480020269.01.T01:intron 15.0%
!! TTAATTACAGTAAAGAATAA+TGG + Chr4:37839762-37839781 None:intergenic 15.0%
!! TTATATATGTGCTAATTATT+TGG - Chr4:37834797-37834816 MsG0480020269.01.T01:intron 15.0%
!! TTGTTGGTATTTAATTAAAT+AGG - Chr4:37838829-37838848 MsG0480020269.01.T01:intron 15.0%
!!! AATTTATCTTTCTTTTCATT+CGG + Chr4:37839562-37839581 None:intergenic 15.0%
!!! AATTTTGTATAATCGTATAA+TGG - Chr4:37834972-37834991 MsG0480020269.01.T01:intron 15.0%
!!! CATTTTATCAAATTATTATC+CGG + Chr4:37834174-37834193 None:intergenic 15.0%
!!! CTATATTAATCATATTTTCT+TGG - Chr4:37835853-37835872 MsG0480020269.01.T01:intron 15.0%
!!! GTAATTATGAATATGAATTT+TGG - Chr4:37838289-37838308 MsG0480020269.01.T01:intron 15.0%
!!! GTATATTTTTATAAAAGTTG+GGG - Chr4:37834474-37834493 MsG0480020269.01.T01:intron 15.0%
!!! TATATTTTTATAAAAGTTGG+GGG - Chr4:37834475-37834494 MsG0480020269.01.T01:intron 15.0%
!! AAAAAAACTTCACTTGATAA+TGG + Chr4:37835589-37835608 None:intergenic 20.0%
!! AAAAATTGTATGTGCTAATT+AGG - Chr4:37834769-37834788 MsG0480020269.01.T01:intron 20.0%
!! AAAGATTATACACATATCTA+CGG + Chr4:37834365-37834384 None:intergenic 20.0%
!! AATTTATTCTACTCTATTTC+GGG + Chr4:37837635-37837654 None:intergenic 20.0%
!! ACAAATCTTCTACAAAAATT+TGG + Chr4:37834507-37834526 None:intergenic 20.0%
!! ACTAGCTACATTAAATAAAA+AGG + Chr4:37838733-37838752 None:intergenic 20.0%
!! ACTTTAATAGCGATTATAAA+CGG - Chr4:37836913-37836932 MsG0480020269.01.T01:intron 20.0%
!! ATAACTAAATTAACTTATGC+GGG - Chr4:37835178-37835197 MsG0480020269.01.T01:intron 20.0%
!! ATACATACATAGACATAAAA+AGG + Chr4:37835798-37835817 None:intergenic 20.0%
!! ATGTTATTGTTATGTTTACA+AGG + Chr4:37836583-37836602 None:intergenic 20.0%
!! ATGTTTAGATTCATATATTC+TGG - Chr4:37836534-37836553 MsG0480020269.01.T01:intron 20.0%
!! ATTAAAGTGTGAAAAATAAG+GGG + Chr4:37836901-37836920 None:intergenic 20.0%
!! CAAAAGTTCAATAAAATTCA+TGG - Chr4:37839649-37839668 MsG0480020269.01.T01:CDS 20.0%
!! CAATAACATGTAGTTAAATA+TGG - Chr4:37836594-37836613 MsG0480020269.01.T01:intron 20.0%
!! CAATTTATTCTACTCTATTT+CGG + Chr4:37837636-37837655 None:intergenic 20.0%
!! CATAACTAAATTAACTTATG+CGG - Chr4:37835177-37835196 MsG0480020269.01.T01:intron 20.0%
!! CTAGCTACATTAAATAAAAA+GGG + Chr4:37838732-37838751 None:intergenic 20.0%
!! CTATTAAAGTGTGAAAAATA+AGG + Chr4:37836903-37836922 None:intergenic 20.0%
!! CTATTAAGAGATTAATTAGT+TGG + Chr4:37836760-37836779 None:intergenic 20.0%
!! GACAAAAAATTGTACTAATT+TGG + Chr4:37835352-37835371 None:intergenic 20.0%
!! TATTTATTATACATTGAGTC+GGG + Chr4:37836388-37836407 None:intergenic 20.0%
!! TGATAACCATCTAAAAATTT+AGG + Chr4:37836992-37837011 None:intergenic 20.0%
!! TGTTTAGATTCATATATTCT+GGG - Chr4:37836535-37836554 MsG0480020269.01.T01:intron 20.0%
!! TTTCAAATTATTAGTTGTGT+CGG - Chr4:37833929-37833948 MsG0480020269.01.T01:intron 20.0%
!!! AGTTAATTTTGTTCATAAAC+AGG + Chr4:37839212-37839231 None:intergenic 20.0%
!!! ATGTTTTTACACATTTATGA+TGG - Chr4:37835816-37835835 MsG0480020269.01.T01:intron 20.0%
!!! TTAATTACTTAAAGCTTTAG+AGG - Chr4:37838206-37838225 MsG0480020269.01.T01:intron 20.0%
!!! TTTTGTTTTTTTGTCATTCA+TGG + Chr4:37837580-37837599 None:intergenic 20.0%
! AAAAACAAGTTTATCAGGTA+AGG + Chr4:37837169-37837188 None:intergenic 25.0%
! AAAAACCATACTTAGCAAAA+AGG + Chr4:37839723-37839742 None:intergenic 25.0%
! AAAACAAGTTTATCAGGTAA+GGG + Chr4:37837168-37837187 None:intergenic 25.0%
! AAAGTCTATCATAGATATGT+TGG - Chr4:37837011-37837030 MsG0480020269.01.T01:intron 25.0%
! AAATGTTTGATTCTGGTAAA+GGG + Chr4:37833767-37833786 None:intergenic 25.0%
! AAATTAACTAGTCAAATTCC+AGG - Chr4:37839223-37839242 MsG0480020269.01.T01:intron 25.0%
! AAGCACCAAAATAAAATCAT+GGG + Chr4:37839603-37839622 None:intergenic 25.0%
! ACACAAAAACTCTTAGAATT+GGG + Chr4:37837215-37837234 None:intergenic 25.0%
! AGGGAATATAAATAAAGAGA+AGG + Chr4:37839092-37839111 None:intergenic 25.0%
! AGTAAAAAAAGAACTTTAGC+AGG + Chr4:37838776-37838795 None:intergenic 25.0%
! ATACTGAGATCATAAATCTT+TGG + Chr4:37835926-37835945 None:intergenic 25.0%
! ATATTTAATGTAGCTAGTTG+AGG - Chr4:37838536-37838555 MsG0480020269.01.T01:intron 25.0%
! CAAAATAAAATCATGGGAAA+AGG + Chr4:37839597-37839616 None:intergenic 25.0%
! CAATCCACAAAAAAATTGTA+AGG + Chr4:37836952-37836971 None:intergenic 25.0%
! CGAGAAAATGAAACAAATTT+AGG + Chr4:37838373-37838392 None:intergenic 25.0%
! GAATACAACATTAAAAGACA+AGG + Chr4:37836194-37836213 None:intergenic 25.0%
! GACATAAAAAGGAAAATGAT+TGG + Chr4:37835787-37835806 None:intergenic 25.0%
! GCTTAAATAGTTATTACAAG+TGG - Chr4:37836290-37836309 MsG0480020269.01.T01:intron 25.0%
! GTTCAATAAAATTCATGGAA+TGG - Chr4:37839654-37839673 MsG0480020269.01.T01:CDS 25.0%
! TAATTAGTTGGATCGAAATA+TGG + Chr4:37836748-37836767 None:intergenic 25.0%
! TATATTCCCAAGTACAAAAT+CGG - Chr4:37839448-37839467 MsG0480020269.01.T01:intron 25.0%
! TATTATACTTTGCATATGCA+GGG - Chr4:37835948-37835967 MsG0480020269.01.T01:intron 25.0%
! TATTTAATGTAGCTAGTTGA+GGG - Chr4:37838537-37838556 MsG0480020269.01.T01:intron 25.0%
! TCGTAAAAATTGTATCCAAT+AGG + Chr4:37837372-37837391 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + Chr4:37836728-37836747 None:intergenic 25.0%
! TTAAAGTGTGAAAAATAAGG+GGG + Chr4:37836900-37836919 None:intergenic 25.0%
! TTAGCAAAAAGGAAAGATAA+AGG + Chr4:37839712-37839731 None:intergenic 25.0%
! TTCAAGGAAAAGTTAAATGA+AGG + Chr4:37835222-37835241 None:intergenic 25.0%
! TTGAAAAAAAGGAATAAGCA+AGG - Chr4:37834659-37834678 MsG0480020269.01.T01:intron 25.0%
!! AAAGAATAATGGAATGCATA+AGG + Chr4:37839751-37839770 None:intergenic 25.0%
!! ATTTGTTGAAAGAGAGAAAA+AGG + Chr4:37838939-37838958 None:intergenic 25.0%
!! ATTTTATGGTATTTTTCTGG+TGG - Chr4:37834006-37834025 MsG0480020269.01.T01:intron 25.0%
!! ATTTTCAGCGAAAACAAAAA+CGG + Chr4:37839261-37839280 None:intergenic 25.0%
!! GTCCAACTTAACAATTTTAT+GGG + Chr4:37837887-37837906 None:intergenic 25.0%
!! TATCGTTTAGGATTTAAAAC+TGG - Chr4:37834912-37834931 MsG0480020269.01.T01:intron 25.0%
!! TGTCCAACTTAACAATTTTA+TGG + Chr4:37837888-37837907 None:intergenic 25.0%
!! TTTGTTTCCTTGAATTTTGT+TGG - Chr4:37838238-37838257 MsG0480020269.01.T01:intron 25.0%
!! TTTTGCTAAGTATGGTTTTT+AGG - Chr4:37839723-37839742 MsG0480020269.01.T01:CDS 25.0%
!!! ACCTGATAAACTTGTTTTTT+GGG - Chr4:37837170-37837189 MsG0480020269.01.T01:intron 25.0%
!!! ATTTTTTTGTGGATTGAGTT+AGG - Chr4:37836956-37836975 MsG0480020269.01.T01:intron 25.0%
!!! CTCTTTTGTTTGTCATTTTA+TGG - Chr4:37833992-37834011 MsG0480020269.01.T01:intron 25.0%
!!! CTTGATAATGGATTAATACT+CGG + Chr4:37835577-37835596 None:intergenic 25.0%
!!! CTTTTCCCATGATTTTATTT+TGG - Chr4:37839595-37839614 MsG0480020269.01.T01:intron 25.0%
!!! GTCAAACCTAAATTTTTAGA+TGG - Chr4:37836983-37837002 MsG0480020269.01.T01:intron 25.0%
!!! GTCATTTTATGGTATTTTTC+TGG - Chr4:37834003-37834022 MsG0480020269.01.T01:intron 25.0%
!!! TACCTGATAAACTTGTTTTT+TGG - Chr4:37837169-37837188 MsG0480020269.01.T01:intron 25.0%
!!! TGAGAAAACAAATTTTAGTC+TGG - Chr4:37839410-37839429 MsG0480020269.01.T01:intron 25.0%
AAAACTCTATATTTGCGAGT+CGG - Chr4:37834615-37834634 MsG0480020269.01.T01:intron 30.0%
AAGAAAGAAGTAATCCAACA+TGG - Chr4:37835296-37835315 MsG0480020269.01.T01:intron 30.0%
AAGAAGGTTTAATAGAAGGA+GGG + Chr4:37833641-37833660 None:intergenic 30.0%
AATACAAAACTCTCAGCATT+TGG - Chr4:37834738-37834757 MsG0480020269.01.T01:intron 30.0%
AATCTTCCAATAAATGCTTC+TGG + Chr4:37837467-37837486 None:intergenic 30.0%
AATGTTTGATTCTGGTAAAG+GGG + Chr4:37833766-37833785 None:intergenic 30.0%
ACCCAAAAAACAAGTTTATC+AGG + Chr4:37837174-37837193 None:intergenic 30.0%
ACTCAATTTCTCTTTATGTG+AGG + Chr4:37839112-37839131 None:intergenic 30.0%
AGAAAGAAGTAATCCAACAT+GGG - Chr4:37835297-37835316 MsG0480020269.01.T01:intron 30.0%
AGAATCAAACATTTCTCAAC+CGG - Chr4:37833773-37833792 MsG0480020269.01.T01:intron 30.0%
AGTCACTACCAAAAAAAAAC+CGG + Chr4:37836336-37836355 None:intergenic 30.0%
ATAAAGATCAAAAGTAGGAC+AGG + Chr4:37835524-37835543 None:intergenic 30.0%
ATACAAAACTCTCAGCATTT+GGG - Chr4:37834739-37834758 MsG0480020269.01.T01:intron 30.0%
ATGCTACATACACAAAAACA+GGG + Chr4:37839364-37839383 None:intergenic 30.0%
ATTAAATAAAAAGGGCAACC+CGG + Chr4:37838724-37838743 None:intergenic 30.0%
ATTTAATGTAGCTAGTTGAG+GGG - Chr4:37838538-37838557 MsG0480020269.01.T01:intron 30.0%
CAACTAATGCAGAAAGTAAT+AGG + Chr4:37835013-37835032 None:intergenic 30.0%
CAATCAAACAATGTCAACAT+CGG + Chr4:37835438-37835457 None:intergenic 30.0%
CACAAAAACTCTTAGAATTG+GGG + Chr4:37837214-37837233 None:intergenic 30.0%
CACAAATTAGTTGACAATCT+TGG - Chr4:37839823-37839842 MsG0480020269.01.T01:CDS 30.0%
CACACAAAAACTCTTAGAAT+TGG + Chr4:37837216-37837235 None:intergenic 30.0%
CTATTATACTTTGCATATGC+AGG - Chr4:37835947-37835966 MsG0480020269.01.T01:intron 30.0%
CTCAATTTCTCTTTATGTGA+GGG + Chr4:37839111-37839130 None:intergenic 30.0%
GAAATGTTTGATTCTGGTAA+AGG + Chr4:37833768-37833787 None:intergenic 30.0%
GATAGATACCTGTACAAAAA+CGG + Chr4:37836087-37836106 None:intergenic 30.0%
TAAAGAACTCTGTTGTAGTA+AGG + Chr4:37836853-37836872 None:intergenic 30.0%
TAAAGATCAAAAGTAGGACA+GGG + Chr4:37835523-37835542 None:intergenic 30.0%
TAACTTAGTAAAGTGGGATA+GGG - Chr4:37837254-37837273 MsG0480020269.01.T01:intron 30.0%
TATGCTACATACACAAAAAC+AGG + Chr4:37839365-37839384 None:intergenic 30.0%
TGCCCATAAAATTGTTAAGT+TGG - Chr4:37837882-37837901 MsG0480020269.01.T01:intron 30.0%
TGGAAATAGAGTTCTTAATC+TGG + Chr4:37837949-37837968 None:intergenic 30.0%
TGGACATAAATATTCACTAC+AGG + Chr4:37836121-37836140 None:intergenic 30.0%
TTAAATCGATAAACGCCTAT+TGG - Chr4:37837354-37837373 MsG0480020269.01.T01:CDS 30.0%
TTAACTTAGTAAAGTGGGAT+AGG - Chr4:37837253-37837272 MsG0480020269.01.T01:intron 30.0%
TTAGTGAAAGGTTAATGTAC+TGG + Chr4:37839319-37839338 None:intergenic 30.0%
TTATGACCATAAGTTCTGTT+TGG + Chr4:37835162-37835181 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG + Chr4:37833898-37833917 None:intergenic 30.0%
! ACCTCTTTAACTTAGTAAAG+TGG - Chr4:37837247-37837266 MsG0480020269.01.T01:intron 30.0%
! CAGACTGCAATTTTGAATTT+TGG - Chr4:37834407-37834426 MsG0480020269.01.T01:intron 30.0%
! CCTCTTTAACTTAGTAAAGT+GGG - Chr4:37837248-37837267 MsG0480020269.01.T01:intron 30.0%
! CTTTTCCTTGAATGAACTTT+AGG - Chr4:37835230-37835249 MsG0480020269.01.T01:intron 30.0%
! GAAGCACCAAAATAAAATCA+TGG + Chr4:37839604-37839623 None:intergenic 30.0%
! TCATGGAATGGTTGAATTTT+AGG - Chr4:37839666-37839685 MsG0480020269.01.T01:CDS 30.0%
! TCTTTCCTTTTTGCTAAGTA+TGG - Chr4:37839715-37839734 MsG0480020269.01.T01:CDS 30.0%
! TGTTAAAGAGTGTAGTTTCT+AGG + Chr4:37837306-37837325 None:intergenic 30.0%
! TTTTCAGCGAAAACAAAAAC+GGG + Chr4:37839260-37839279 None:intergenic 30.0%
!! AAACCGATTAGCTTATGAAA+GGG - Chr4:37836058-37836077 MsG0480020269.01.T01:intron 30.0%
!! CAATTCTAAGAGTTTTTGTG+TGG - Chr4:37837214-37837233 MsG0480020269.01.T01:intron 30.0%
!! TAAACCGATTAGCTTATGAA+AGG - Chr4:37836057-37836076 MsG0480020269.01.T01:intron 30.0%
!! TAGTAACCGATTTTGTACTT+GGG + Chr4:37839457-37839476 None:intergenic 30.0%
!! TTTCTGGTGGAATGTTTTAT+TGG - Chr4:37834019-37834038 MsG0480020269.01.T01:intron 30.0%
!!! CTGACCTTACAATTTTTTTG+TGG - Chr4:37836945-37836964 MsG0480020269.01.T01:intron 30.0%
!!! TTTTGACCAGAAGCATTTAT+TGG - Chr4:37837458-37837477 MsG0480020269.01.T01:CDS 30.0%
!!! TTTTTTGTATGCAGAGAAAG+AGG + Chr4:37833589-37833608 None:intergenic 30.0%
AAATGCTTCTGGTCAAAAAC+AGG + Chr4:37837456-37837475 None:intergenic 35.0%
AACCATGAACTCTAAGTACT+CGG + Chr4:37833719-37833738 None:intergenic 35.0%
AACTCTTAGAATTGGGGTTT+AGG + Chr4:37837208-37837227 None:intergenic 35.0%
AAGACTGACAACATAGACAT+TGG - Chr4:37838433-37838452 MsG0480020269.01.T01:intron 35.0%
AAGCAAGGTGAAAGAATTAG+AGG - Chr4:37834674-37834693 MsG0480020269.01.T01:intron 35.0%
AATGTCTATGTTGTCAGTCT+TGG + Chr4:37838434-37838453 None:intergenic 35.0%
ACATACACAAAAACAGGGAA+TGG + Chr4:37839359-37839378 None:intergenic 35.0%
ACCATAAGTTCTGTTTGGAT+TGG + Chr4:37835157-37835176 None:intergenic 35.0%
ACCTGAATAGTGATACAAGT+GGG - Chr4:37837138-37837157 MsG0480020269.01.T01:intron 35.0%
ACTATTTATCAAACGGTTGC+AGG - Chr4:37834944-37834963 MsG0480020269.01.T01:intron 35.0%
ACTCTTAGAATTGGGGTTTA+GGG + Chr4:37837207-37837226 None:intergenic 35.0%
ACTTATTCAGCTATGTAGCT+AGG - Chr4:37838793-37838812 MsG0480020269.01.T01:intron 35.0%
ACTTGCCTAAAGTTCATTCA+AGG + Chr4:37835238-37835257 None:intergenic 35.0%
AGACATTGGATAGGAGAATA+GGG - Chr4:37838447-37838466 MsG0480020269.01.T01:intron 35.0%
AGCGATACCAACAAAATTCA+AGG + Chr4:37838248-37838267 None:intergenic 35.0%
AGGGAGAGAGTTAATATTGT+TGG - Chr4:37838813-37838832 MsG0480020269.01.T01:intron 35.0%
AGTCAGATCACTATAGATAG+AGG + Chr4:37836809-37836828 None:intergenic 35.0%
ATATCTAGTCCTTTGCGTAA+GGG - Chr4:37837081-37837100 MsG0480020269.01.T01:intron 35.0%
ATCCTATGTCCAAGGAAAAT+AGG - Chr4:37837853-37837872 MsG0480020269.01.T01:intron 35.0%
CCCACTTTACTAAGTTAAAG+AGG + Chr4:37837251-37837270 None:intergenic 35.0%
CGATGTTGACATTGTTTGAT+TGG - Chr4:37835436-37835455 MsG0480020269.01.T01:intron 35.0%
CGGTACTTTACAGATAAGAA+AGG + Chr4:37835418-37835437 None:intergenic 35.0%
CTGGAAGAAGGTTTAATAGA+AGG + Chr4:37833645-37833664 None:intergenic 35.0%
CTTATTCAGCTATGTAGCTA+GGG - Chr4:37838794-37838813 MsG0480020269.01.T01:intron 35.0%
CTTCGGTCACTCAAAATAAT+TGG - Chr4:37835460-37835479 MsG0480020269.01.T01:intron 35.0%
CTTCTATTAAACCTTCTTCC+AGG - Chr4:37833643-37833662 MsG0480020269.01.T01:intron 35.0%
GAAACTAGAGGAAAATTGTG+TGG + Chr4:37837995-37838014 None:intergenic 35.0%
GAAGAAGGTTTAATAGAAGG+AGG + Chr4:37833642-37833661 None:intergenic 35.0%
GAGATTCAAATGCAACTGTT+GGG + Chr4:37837505-37837524 None:intergenic 35.0%
GGTTGAGAAATGTTTGATTC+TGG + Chr4:37833774-37833793 None:intergenic 35.0%
TACAAAACTCTCAGCATTTG+GGG - Chr4:37834740-37834759 MsG0480020269.01.T01:intron 35.0%
TAGACATTGGATAGGAGAAT+AGG - Chr4:37838446-37838465 MsG0480020269.01.T01:intron 35.0%
TATTCGCACTTGACATTTCT+TGG - Chr4:37837392-37837411 MsG0480020269.01.T01:CDS 35.0%
TCAATAACTAAGACCCATGT+TGG + Chr4:37835313-37835332 None:intergenic 35.0%
TCATATCACTATCTACTGTG+AGG + Chr4:37837119-37837138 None:intergenic 35.0%
TGACAACATAGACATTGGAT+AGG - Chr4:37838438-37838457 MsG0480020269.01.T01:intron 35.0%
TGACAATCTTGGACTCATAA+CGG - Chr4:37839834-37839853 MsG0480020269.01.T01:CDS 35.0%
TGTAATCATAGGTTTCGTGT+CGG - Chr4:37834205-37834224 MsG0480020269.01.T01:intron 35.0%
TGTTTCATATGTCCAATCTG+AGG - Chr4:37836454-37836473 MsG0480020269.01.T01:intron 35.0%
TTAAGAACCCTAAACCCATA+AGG - Chr4:37835125-37835144 MsG0480020269.01.T01:intron 35.0%
TTGGGGATGTTTAATTAGTC+AGG - Chr4:37837811-37837830 MsG0480020269.01.T01:intron 35.0%
TTTCCTTGGACATAGGATAT+GGG + Chr4:37837851-37837870 None:intergenic 35.0%
! ACAAGTTGACAGTTAGTGAA+AGG + Chr4:37839331-37839350 None:intergenic 35.0%
! AGTTTTTGTGTGGTCAAGAT+AGG - Chr4:37837224-37837243 MsG0480020269.01.T01:intron 35.0%
! GCAATATTGCCTATTTTCCT+TGG + Chr4:37837865-37837884 None:intergenic 35.0%
! GTTGTTGATGAGTACTTGAA+TGG - Chr4:37839170-37839189 MsG0480020269.01.T01:CDS 35.0%
! GTTTTCGCTGAAAATAGTCA+TGG - Chr4:37839266-37839285 MsG0480020269.01.T01:intron 35.0%
! TCATAACGGAGTATGACTTT+CGG - Chr4:37839848-37839867 MsG0480020269.01.T01:CDS 35.0%
! TTAATGTAGCTAGTTCTTGC+TGG - Chr4:37838739-37838758 MsG0480020269.01.T01:intron 35.0%
! TTTGTGGATTGAGTTAGGTT+AGG - Chr4:37836961-37836980 MsG0480020269.01.T01:intron 35.0%
! TTTTCCTTGGACATAGGATA+TGG + Chr4:37837852-37837871 None:intergenic 35.0%
! TTTTTGTCATTCATGGCTTG+TGG + Chr4:37837573-37837592 None:intergenic 35.0%
!! AACCGATTAGCTTATGAAAG+GGG - Chr4:37836059-37836078 MsG0480020269.01.T01:intron 35.0%
!! CGCTACATGTGCTTTTAAAA+GGG + Chr4:37838477-37838496 None:intergenic 35.0%
!! CTAGTAACCGATTTTGTACT+TGG + Chr4:37839458-37839477 None:intergenic 35.0%
!! GACATTGTTTGATTGGTCTT+CGG - Chr4:37835443-37835462 MsG0480020269.01.T01:intron 35.0%
!! GATAATGGATTAATACTCGG+AGG + Chr4:37835574-37835593 None:intergenic 35.0%
!!! AAACGGGTTGTTTTAAAACC+TGG + Chr4:37839244-37839263 None:intergenic 35.0%
!!! CTTGTTTTTTGGGTTCAAGT+TGG - Chr4:37837180-37837199 MsG0480020269.01.T01:intron 35.0%
!!! GCTTTAGCTCTTTTTGTTTG+GGG - Chr4:37837794-37837813 MsG0480020269.01.T01:intron 35.0%
!!! GGCTTTAGCTCTTTTTGTTT+GGG - Chr4:37837793-37837812 MsG0480020269.01.T01:intron 35.0%
AAACCTTATCCCACTAAGTG+GGG - Chr4:37836679-37836698 MsG0480020269.01.T01:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - Chr4:37838626-37838645 MsG0480020269.01.T01:intron 40.0%
AAGCCATGTCACTATCTAGT+AGG + Chr4:37836274-37836293 None:intergenic 40.0%
AAGGAGAGTAGATCAAACGA+AGG + Chr4:37836834-37836853 None:intergenic 40.0%
ACAAAACTCTCAGCATTTGG+GGG - Chr4:37834741-37834760 MsG0480020269.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - Chr4:37838627-37838646 MsG0480020269.01.T01:intron 40.0%
ACGCAAAGGACTAGATATCT+AGG + Chr4:37837079-37837098 None:intergenic 40.0%
ACTGAATTGTGTCAGTGTCA+AGG - Chr4:37834291-37834310 MsG0480020269.01.T01:intron 40.0%
AGAGAACTTGGGTGCATTAT+GGG - Chr4:37837772-37837791 MsG0480020269.01.T01:intron 40.0%
AGCCATGTCACTATCTAGTA+GGG + Chr4:37836273-37836292 None:intergenic 40.0%
AGCCATTGGTACAAGTAGTA+AGG + Chr4:37837538-37837557 None:intergenic 40.0%
AGCCTTACTACTTGTACCAA+TGG - Chr4:37837533-37837552 MsG0480020269.01.T01:intron 40.0%
AGGAAGACAAACAGAAACAG+AGG + Chr4:37838119-37838138 None:intergenic 40.0%
ATAACCATTACTCCTCTAGG+AGG + Chr4:37835678-37835697 None:intergenic 40.0%
ATAATGCACCCAAGTTCTCT+CGG + Chr4:37837772-37837791 None:intergenic 40.0%
ATGGCAACATGGTATTTGTG+TGG + Chr4:37837426-37837445 None:intergenic 40.0%
ATGTTGTCAGTCTTGGATAG+AGG + Chr4:37838427-37838446 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG - Chr4:37836678-37836697 MsG0480020269.01.T01:intron 40.0%
CAAATTATTATCCGGCGTGT+CGG + Chr4:37834166-37834185 None:intergenic 40.0%
CAACATGGTATTTGTGTGGA+TGG + Chr4:37837422-37837441 None:intergenic 40.0%
CAAGCAATGAAACACGGATA+CGG + Chr4:37834327-37834346 None:intergenic 40.0%
CAATTCAGTGCTATGAAGCA+CGG + Chr4:37834280-37834299 None:intergenic 40.0%
CACCCCTTTCATAAGCTAAT+CGG + Chr4:37836064-37836083 None:intergenic 40.0%
CGCAAAGGACTAGATATCTA+GGG + Chr4:37837078-37837097 None:intergenic 40.0%
CGGTAAAGTCAAGAAACTAG+AGG + Chr4:37838007-37838026 None:intergenic 40.0%
CGTAGAATACACCAAATGGT+GGG - Chr4:37838658-37838677 MsG0480020269.01.T01:intron 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - Chr4:37838632-37838651 MsG0480020269.01.T01:intron 40.0%
CTTGAACAGAAGACAATGAC+TGG + Chr4:37835891-37835910 None:intergenic 40.0%
GAAGACAAACAGAAACAGAG+GGG + Chr4:37838117-37838136 None:intergenic 40.0%
GAATCTATGAAGCACGAACA+CGG - Chr4:37834137-37834156 MsG0480020269.01.T01:intron 40.0%
GACACTATGAAGCACAGATA+CGG + Chr4:37833973-37833992 None:intergenic 40.0%
GACCTGAATAGTGATACAAG+TGG - Chr4:37837137-37837156 MsG0480020269.01.T01:intron 40.0%
GACGCAAACTGATATCGTTT+AGG - Chr4:37834900-37834919 MsG0480020269.01.T01:intron 40.0%
GATATCTAGTCCTTTGCGTA+AGG - Chr4:37837080-37837099 MsG0480020269.01.T01:intron 40.0%
GCCAATCCAAACAGAACTTA+TGG - Chr4:37835153-37835172 MsG0480020269.01.T01:intron 40.0%
GGAAGACAAACAGAAACAGA+GGG + Chr4:37838118-37838137 None:intergenic 40.0%
GTAATTTCCATCTCACAAGC+CGG - Chr4:37836314-37836333 MsG0480020269.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - Chr4:37838583-37838602 MsG0480020269.01.T01:intron 40.0%
TACAAACACCAGTCTACAGA+CGG + Chr4:37834872-37834891 None:intergenic 40.0%
TACTAGATTGCTTTGCATGC+TGG - Chr4:37839472-37839491 MsG0480020269.01.T01:intron 40.0%
TATCTAGTCCTTTGCGTAAG+GGG - Chr4:37837082-37837101 MsG0480020269.01.T01:intron 40.0%
TCCATGCTTGTGTTCATTCA+GGG + Chr4:37833813-37833832 None:intergenic 40.0%
TCCCACTTGTATCACTATTC+AGG + Chr4:37837142-37837161 None:intergenic 40.0%
TCCTAGAGGAGTAATGGTTA+TGG - Chr4:37835677-37835696 MsG0480020269.01.T01:intron 40.0%
TCGCTGAAAATAGTCATGGA+TGG - Chr4:37839270-37839289 MsG0480020269.01.T01:intron 40.0%
TCTGGTCAAAAACAGGATGT+GGG + Chr4:37837449-37837468 None:intergenic 40.0%
TGAAACATTACCCCTGATAC+TGG + Chr4:37836441-37836460 None:intergenic 40.0%
TGTACAAGCAAACTTCGTCT+TGG + Chr4:37835996-37836015 None:intergenic 40.0%
TGTGTAGAGTCATGCATTGA+TGG - Chr4:37836490-37836509 MsG0480020269.01.T01:intron 40.0%
TTCTGGTCAAAAACAGGATG+TGG + Chr4:37837450-37837469 None:intergenic 40.0%
TTGAAACAGAGGGAGAGATT+AGG + Chr4:37833618-37833637 None:intergenic 40.0%
! AAGCTTTTGTGGCAAAATCG+CGG + Chr4:37833685-37833704 None:intergenic 40.0%
! CATAACGGAGTATGACTTTC+GGG - Chr4:37839849-37839868 MsG0480020269.01.T01:CDS 40.0%
! CTTACCCTGTTTTACACAAG+AGG + Chr4:37838634-37838653 None:intergenic 40.0%
! GAGGAATAAGTAAAGAGCGT+TGG + Chr4:37833570-37833589 None:intergenic 40.0%
! GATTCATATATTCTGGGAGC+TGG - Chr4:37836541-37836560 MsG0480020269.01.T01:intron 40.0%
! GCGCTACATGTGCTTTTAAA+AGG + Chr4:37838478-37838497 None:intergenic 40.0%
! GCTTTTGCCTTATGGGTTTA+GGG + Chr4:37835135-37835154 None:intergenic 40.0%
! GTTGGACAAATTTTGCGATC+TGG - Chr4:37837900-37837919 MsG0480020269.01.T01:intron 40.0%
! TACTCTATTTCGGGTCTGTT+TGG + Chr4:37837626-37837645 None:intergenic 40.0%
! TGACTCAACGGATCTAGAAT+AGG + Chr4:37836417-37836436 None:intergenic 40.0%
! TGCCTATTTTCCTTGGACAT+AGG + Chr4:37837858-37837877 None:intergenic 40.0%
! TTTAAAAGCACATGTAGCGC+AGG - Chr4:37838478-37838497 MsG0480020269.01.T01:intron 40.0%
!! AAAAAAACCGGCTTGTGAGA+TGG + Chr4:37836324-37836343 None:intergenic 40.0%
!! ATGTTGGTTCATCCATTGTC+AGG - Chr4:37837027-37837046 MsG0480020269.01.T01:intron 40.0%
!! CTTAGAGTTCATGGTTTGCT+TGG - Chr4:37833723-37833742 MsG0480020269.01.T01:intron 40.0%
!! TCTCAACCGGTTAGTCATTT+TGG - Chr4:37833786-37833805 MsG0480020269.01.T01:intron 40.0%
!!! CTCACAAGCCGGTTTTTTTT+TGG - Chr4:37836325-37836344 MsG0480020269.01.T01:intron 40.0%
!!! GGGCTTTAGCTCTTTTTGTT+TGG - Chr4:37837792-37837811 MsG0480020269.01.T01:intron 40.0%
!!! TGGATTGGCTTTTGCCTTAT+GGG + Chr4:37835142-37835161 None:intergenic 40.0%
!!! TTGGATTGGCTTTTGCCTTA+TGG + Chr4:37835143-37835162 None:intergenic 40.0%
AACAGAGGGAGAGATTAGGT+TGG + Chr4:37833614-37833633 None:intergenic 45.0%
AAGTCTTCTCTTCAGTGCGA+AGG - Chr4:37837968-37837987 MsG0480020269.01.T01:intron 45.0%
AATGAAACACGGATACGGAC+GGG + Chr4:37834322-37834341 None:intergenic 45.0%
ACAAACAGAAACAGAGGGGT+TGG + Chr4:37838113-37838132 None:intergenic 45.0%
ACAGAATGTCGTGAGAGACA+TGG - Chr4:37837691-37837710 MsG0480020269.01.T01:intron 45.0%
ACAGAGGGAGAGATTAGGTT+GGG + Chr4:37833613-37833632 None:intergenic 45.0%
ACCCCAAAACTAGGATAGCA+GGG + Chr4:37838396-37838415 None:intergenic 45.0%
ACTCTATATTTGCGAGTCGG+AGG - Chr4:37834618-37834637 MsG0480020269.01.T01:intron 45.0%
AGAAGGAGGGTTGAAACAGA+GGG + Chr4:37833628-37833647 None:intergenic 45.0%
AGAGCAGTCGGTAGAGAATA+CGG - Chr4:37834583-37834602 MsG0480020269.01.T01:intron 45.0%
AGGGGAGGGACTTGAAAAAA+AGG - Chr4:37834648-37834667 MsG0480020269.01.T01:intron 45.0%
AGTTCCTCTTACTAGTGTGC+AGG - Chr4:37839787-37839806 MsG0480020269.01.T01:CDS 45.0%
ATATCTACGGACACAGACTC+AGG + Chr4:37834352-37834371 None:intergenic 45.0%
ATCAAAAGTAGGACAGGGAC+TGG + Chr4:37835518-37835537 None:intergenic 45.0%
CAAACAGAAACAGAGGGGTT+GGG + Chr4:37838112-37838131 None:intergenic 45.0%
CAAAGTCTTGACCTGGAAGA+AGG + Chr4:37833657-37833676 None:intergenic 45.0%
CAATGAAACACGGATACGGA+CGG + Chr4:37834323-37834342 None:intergenic 45.0%
CACAGCGAAACAGAAACTGA+AGG + Chr4:37838139-37838158 None:intergenic 45.0%
CAGGCACAAGCAATGAAACA+CGG + Chr4:37834333-37834352 None:intergenic 45.0%
CAGGGACCAAAATGACTAAC+CGG + Chr4:37833795-37833814 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG - Chr4:37836677-37836696 MsG0480020269.01.T01:intron 45.0%
CCACTTAGTGGGATAAGGTT+TGG + Chr4:37836680-37836699 None:intergenic 45.0%
CCTGATACTGGATGACTCAA+CGG + Chr4:37836429-37836448 None:intergenic 45.0%
CCTGATTCAACCCACCAAAT+CGG + Chr4:37836365-37836384 None:intergenic 45.0%
CGAAGTGAAACCAGACATTG+TGG - Chr4:37838033-37838052 MsG0480020269.01.T01:intron 45.0%
CGTTGAGTCATCCAGTATCA+GGG - Chr4:37836427-37836446 MsG0480020269.01.T01:intron 45.0%
CTCTATATTTGCGAGTCGGA+GGG - Chr4:37834619-37834638 MsG0480020269.01.T01:intron 45.0%
CTTCAGTTTCTGTTTCGCTG+TGG - Chr4:37838137-37838156 MsG0480020269.01.T01:intron 45.0%
CTTGGACATAGGATATGGGT+CGG + Chr4:37837847-37837866 None:intergenic 45.0%
GAAAGAACTGTGAGAGCAGT+CGG - Chr4:37834571-37834590 MsG0480020269.01.T01:intron 45.0%
GAGAGAACTTGGGTGCATTA+TGG - Chr4:37837771-37837790 MsG0480020269.01.T01:intron 45.0%
GCCATAACCATTACTCCTCT+AGG + Chr4:37835681-37835700 None:intergenic 45.0%
GCGTAGAATACACCAAATGG+TGG - Chr4:37838657-37838676 MsG0480020269.01.T01:intron 45.0%
GCTGCGTAGAATACACCAAA+TGG - Chr4:37838654-37838673 MsG0480020269.01.T01:intron 45.0%
GTCAAAAACAGGATGTGGGA+TGG + Chr4:37837445-37837464 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - Chr4:37838589-37838608 MsG0480020269.01.T01:intron 45.0%
GTCCATGCTTGTGTTCATTC+AGG + Chr4:37833814-37833833 None:intergenic 45.0%
GTCCCTACTAGATAGTGACA+TGG - Chr4:37836268-37836287 MsG0480020269.01.T01:intron 45.0%
GTTGAGTCATCCAGTATCAG+GGG - Chr4:37836428-37836447 MsG0480020269.01.T01:intron 45.0%
TAGAAGGAGGGTTGAAACAG+AGG + Chr4:37833629-37833648 None:intergenic 45.0%
TAGAGGACAATGAGAGCAGA+GGG - Chr4:37834691-37834710 MsG0480020269.01.T01:intron 45.0%
TAGTGACTCACAAGCCGATT+TGG - Chr4:37836348-37836367 MsG0480020269.01.T01:intron 45.0%
TATCTCATTTCGCCTCCTAG+AGG - Chr4:37835663-37835682 MsG0480020269.01.T01:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - Chr4:37838590-37838609 MsG0480020269.01.T01:intron 45.0%
TCCCTGAATGAACACAAGCA+TGG - Chr4:37833809-37833828 MsG0480020269.01.T01:intron 45.0%
TCTATATTTGCGAGTCGGAG+GGG - Chr4:37834620-37834639 MsG0480020269.01.T01:intron 45.0%
TCTCAACTGAGGTGAGTGTT+TGG + Chr4:37835267-37835286 None:intergenic 45.0%
TGTGCGATGAAAGAACAGAG+AGG - Chr4:37836030-37836049 MsG0480020269.01.T01:intron 45.0%
TTAGAGGACAATGAGAGCAG+AGG - Chr4:37834690-37834709 MsG0480020269.01.T01:intron 45.0%
TTCATCCATTGTCAGGCCAT+TGG - Chr4:37837034-37837053 MsG0480020269.01.T01:intron 45.0%
TTCCAGAAGCTTCTCAACTG+AGG + Chr4:37835278-37835297 None:intergenic 45.0%
TTCGCACTGAAGAGAAGACT+TGG + Chr4:37837969-37837988 None:intergenic 45.0%
! AATGAGAGCAGAGGGTTTTG+GGG - Chr4:37834699-37834718 MsG0480020269.01.T01:intron 45.0%
! ACAATGAGAGCAGAGGGTTT+TGG - Chr4:37834697-37834716 MsG0480020269.01.T01:intron 45.0%
! ACTAACTTGTGCACACTCCT+CGG - Chr4:37834047-37834066 MsG0480020269.01.T01:intron 45.0%
! ATGGCTTGTGGTAGTAGACT+AGG + Chr4:37837561-37837580 None:intergenic 45.0%
! ATGTCCAATCTGAGGCATGA+AGG - Chr4:37836462-37836481 MsG0480020269.01.T01:intron 45.0%
! CAATGAGAGCAGAGGGTTTT+GGG - Chr4:37834698-37834717 MsG0480020269.01.T01:intron 45.0%
! GGCTTTTGCCTTATGGGTTT+AGG + Chr4:37835136-37835155 None:intergenic 45.0%
! TATCTAGGGTGTTAGCTGAG+TGG + Chr4:37837064-37837083 None:intergenic 45.0%
! TATTTCGGGTCTGTTTGGTG+TGG + Chr4:37837621-37837640 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr4:37838623-37838642 None:intergenic 45.0%
AAACAGAGGGGTTGGGAACT+AGG + Chr4:37838105-37838124 None:intergenic 50.0%
AACACACACCCCTTACGCAA+AGG + Chr4:37837093-37837112 None:intergenic 50.0%
AACAGAGGGGTTGGGAACTA+GGG + Chr4:37838104-37838123 None:intergenic 50.0%
AATACAACGGTGGCTGGCAA+AGG + Chr4:37838071-37838090 None:intergenic 50.0%
ACACAAGCATGGACACTCCT+CGG - Chr4:37833820-37833839 MsG0480020269.01.T01:intron 50.0%
ACAGCCTGCACACTAGTAAG+AGG + Chr4:37839794-37839813 None:intergenic 50.0%
AGAGCCTTCGAATACAACGG+TGG + Chr4:37838081-37838100 None:intergenic 50.0%
AGAGTGAGACCGAGAGAACT+TGG - Chr4:37837760-37837779 MsG0480020269.01.T01:intron 50.0%
AGCTAGTTGAGGGGTAACCT+TGG - Chr4:37838547-37838566 MsG0480020269.01.T01:intron 50.0%
AGTCTTGGATAGAGGAGCAG+TGG + Chr4:37838419-37838438 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + Chr4:37838567-37838586 None:intergenic 50.0%
CACCTCAGTTGAGAAGCTTC+TGG - Chr4:37835273-37835292 MsG0480020269.01.T01:intron 50.0%
CAGTCACGAGAGACAGAGAT+AGG - Chr4:37837658-37837677 MsG0480020269.01.T01:intron 50.0%
CCGTTGAGTCATCCAGTATC+AGG - Chr4:37836426-37836445 MsG0480020269.01.T01:intron 50.0%
CGACCCATATCCTATGTCCA+AGG - Chr4:37837845-37837864 MsG0480020269.01.T01:intron 50.0%
CGCCGAGTACTTAGAGTTCA+TGG - Chr4:37833714-37833733 MsG0480020269.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr4:37836683-37836702 MsG0480020269.01.T01:intron 50.0%
GACCCCAAAACTAGGATAGC+AGG + Chr4:37838397-37838416 None:intergenic 50.0%
GAGTGAGACCGAGAGAACTT+GGG - Chr4:37837761-37837780 MsG0480020269.01.T01:intron 50.0%
GGCAACACAAAGTCTTGACC+TGG + Chr4:37833664-37833683 None:intergenic 50.0%
GGGAGAGCCTTCGAATACAA+CGG + Chr4:37838084-37838103 None:intergenic 50.0%
GGTAGTAGACTAGGAGCCAT+TGG + Chr4:37837552-37837571 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG + Chr4:37834269-37834288 None:intergenic 50.0%
TCTCGGTCTCACTCTGTCTA+GGG + Chr4:37837755-37837774 None:intergenic 50.0%
TGAAGCACAGATACGGACAC+CGG + Chr4:37833966-37833985 None:intergenic 50.0%
TGCCACAAAAGCTTCCCCAT+CGG - Chr4:37833691-37833710 MsG0480020269.01.T01:intron 50.0%
TTCGCCTCCTAGAGGAGTAA+TGG - Chr4:37835671-37835690 MsG0480020269.01.T01:intron 50.0%
TTGTGCACACTCCTCGGATT+TGG - Chr4:37834053-37834072 MsG0480020269.01.T01:intron 50.0%
! CAGAGGGAGAGATTAGGTTG+GGG + Chr4:37833612-37833631 None:intergenic 50.0%
! CATAGGTTTCGTGTCGGTGT+CGG - Chr4:37834211-37834230 MsG0480020269.01.T01:intron 50.0%
! TCCAATCTGAGGCATGAAGG+TGG - Chr4:37836465-37836484 MsG0480020269.01.T01:intron 50.0%
! TCGCCCTGCTATCCTAGTTT+TGG - Chr4:37838390-37838409 MsG0480020269.01.T01:intron 50.0%
!! ATGAGAGCAGAGGGTTTTGG+GGG - Chr4:37834700-37834719 MsG0480020269.01.T01:intron 50.0%
!! CCGATTTGGTGGGTTGAATC+AGG - Chr4:37836362-37836381 MsG0480020269.01.T01:intron 50.0%
!! CGCCCTGCTATCCTAGTTTT+GGG - Chr4:37838391-37838410 MsG0480020269.01.T01:intron 50.0%
!! GACTCACAAGCCGATTTGGT+GGG - Chr4:37836352-37836371 MsG0480020269.01.T01:intron 50.0%
!! TACAAGTGTCGGTGTCGTGT+CGG + Chr4:37833887-37833906 None:intergenic 50.0%
!! TGACTCACAAGCCGATTTGG+TGG - Chr4:37836351-37836370 MsG0480020269.01.T01:intron 50.0%
!! TTAGCTGAGTGGACTGCCAA+TGG + Chr4:37837053-37837072 None:intergenic 50.0%
!!! AAGGGGTGCCGTTTTTGTAC+AGG - Chr4:37836076-37836095 MsG0480020269.01.T01:intron 50.0%
!!! GCCCTGCTATCCTAGTTTTG+GGG - Chr4:37838392-37838411 MsG0480020269.01.T01:intron 50.0%
AAGGTCACGGGTTCAAGTCC+TGG - Chr4:37838602-37838621 MsG0480020269.01.T01:intron 55.0%
ACACGACACATGTCCGACTC+TGG + Chr4:37833858-37833877 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr4:37836691-37836710 MsG0480020269.01.T01:intron 55.0%
ACTAGAGCTCCCGCATATGC+AGG + Chr4:37838698-37838717 None:intergenic 55.0%
AGGGTTGGGTCCACAATGTC+TGG + Chr4:37838046-37838065 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr4:37836692-37836711 None:intergenic 55.0%
ATTTGCGAGTCGGAGGGGAA+GGG - Chr4:37834625-37834644 MsG0480020269.01.T01:intron 55.0%
CACGACACATGTCCGACTCT+GGG + Chr4:37833857-37833876 None:intergenic 55.0%
CAGGATGTGGGATGGCAACA+TGG + Chr4:37837437-37837456 None:intergenic 55.0%
CATATGCAGGGTTCGGGAAG+GGG + Chr4:37838685-37838704 None:intergenic 55.0%
CCAGCCACCGTTGTATTCGA+AGG - Chr4:37838074-37838093 MsG0480020269.01.T01:intron 55.0%
CCAGTCTACAGACGGAGCAA+CGG + Chr4:37834864-37834883 None:intergenic 55.0%
CCTTCGAATACAACGGTGGC+TGG + Chr4:37838077-37838096 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr4:37836685-37836704 None:intergenic 55.0%
CTACAGACGGAGCAACGGAT+TGG + Chr4:37834859-37834878 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG + Chr4:37838697-37838716 None:intergenic 55.0%
CTCTCGGTCTCACTCTGTCT+AGG + Chr4:37837756-37837775 None:intergenic 55.0%
CTGGTTTCACTTCGCAGCAG+CGG + Chr4:37838027-37838046 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - Chr4:37838685-37838704 MsG0480020269.01.T01:intron 55.0%
GACTGCCAATGGCCTGACAA+TGG + Chr4:37837042-37837061 None:intergenic 55.0%
GAGCAGTGGACCCCAAAACT+AGG + Chr4:37838405-37838424 None:intergenic 55.0%
GATTAGGCGTGTCCCAGAGT+CGG - Chr4:37833842-37833861 MsG0480020269.01.T01:intron 55.0%
GCATATGCAGGGTTCGGGAA+GGG + Chr4:37838686-37838705 None:intergenic 55.0%
GCATGGACACTCCTCGGATT+AGG - Chr4:37833826-37833845 MsG0480020269.01.T01:intron 55.0%
GCCACCTTCATGCCTCAGAT+TGG + Chr4:37836469-37836488 None:intergenic 55.0%
TATTTGCGAGTCGGAGGGGA+AGG - Chr4:37834624-37834643 MsG0480020269.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr4:37836691-37836710 None:intergenic 55.0%
TTCCCGAACCCTGCATATGC+GGG - Chr4:37838686-37838705 MsG0480020269.01.T01:intron 55.0%
! TGTGTCGGTGTGTCAGTGTC+CGG - Chr4:37833944-37833963 MsG0480020269.01.T01:intron 55.0%
!! TCTAAGTACTCGGCGCCGAT+GGG + Chr4:37833709-37833728 None:intergenic 55.0%
AACGGTGGCTGGCAAAGGCA+AGG + Chr4:37838066-37838085 None:intergenic 60.0%
ACACGTGTCTGACACCCACC+GGG + Chr4:37834084-37834103 None:intergenic 60.0%
ACGGTGGCTGGCAAAGGCAA+GGG + Chr4:37838065-37838084 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - Chr4:37838556-37838575 MsG0480020269.01.T01:intron 60.0%
CCGTTGCTCCGTCTGTAGAC+TGG - Chr4:37834861-37834880 MsG0480020269.01.T01:intron 60.0%
CGCATATGCAGGGTTCGGGA+AGG + Chr4:37838687-37838706 None:intergenic 60.0%
CTCCCGCATATGCAGGGTTC+GGG + Chr4:37838691-37838710 None:intergenic 60.0%
GACACGTGTCTGACACCCAC+CGG + Chr4:37834085-37834104 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG + Chr4:37834263-37834282 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG + Chr4:37838692-37838711 None:intergenic 60.0%
GGACACTGACACGTGTCCGA+GGG - Chr4:37834232-37834251 MsG0480020269.01.T01:intron 60.0%
GGCTGGCAAAGGCAAGGGTT+GGG + Chr4:37838060-37838079 None:intergenic 60.0%
TCCTCGGATTTGGCGTGTCC+CGG - Chr4:37834063-37834082 MsG0480020269.01.T01:intron 60.0%
TGGCTGGCAAAGGCAAGGGT+TGG + Chr4:37838061-37838080 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - Chr4:37838702-37838721 MsG0480020269.01.T01:intron 60.0%
! CGCCGATGGGGAAGCTTTTG+TGG + Chr4:37833696-37833715 None:intergenic 60.0%
! CTCGGATTAGGCGTGTCCCT+CGG + Chr4:37834251-37834270 None:intergenic 60.0%
! CTCTAAGTACTCGGCGCCGA+TGG + Chr4:37833710-37833729 None:intergenic 60.0%
! TCTGGGACACGCCTAATCCG+AGG + Chr4:37833840-37833859 None:intergenic 60.0%
!! CTAAGTACTCGGCGCCGATG+GGG + Chr4:37833708-37833727 None:intergenic 60.0%
!! TGTCGGTGTCGTGTCGGTGT+TGG + Chr4:37833881-37833900 None:intergenic 60.0%
ACCGGGACACGCCAAATCCG+AGG + Chr4:37834067-37834086 None:intergenic 65.0%
CGAGGGACACGCCTAATCCG+AGG - Chr4:37834249-37834268 MsG0480020269.01.T01:intron 65.0%
CGGACACTGACACGTGTCCG+AGG - Chr4:37834231-37834250 MsG0480020269.01.T01:intron 65.0%
CGGATTTGGCGTGTCCCGGT+GGG - Chr4:37834067-37834086 MsG0480020269.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr4:37838672-37838691 None:intergenic 65.0%
GAACACGGACACCGACACGC+CGG - Chr4:37834152-37834171 MsG0480020269.01.T01:intron 65.0%
TCGGATTTGGCGTGTCCCGG+TGG - Chr4:37834066-37834085 MsG0480020269.01.T01:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - Chr4:37838703-37838722 MsG0480020269.01.T01:intron 65.0%
CGAGTCGGAGGGGAAGGGAG+GGG - Chr4:37834630-37834649 MsG0480020269.01.T01:intron 70.0%
GCGAGTCGGAGGGGAAGGGA+GGG - Chr4:37834629-37834648 MsG0480020269.01.T01:intron 70.0%
TCGGAGGGGAAGGGAGGGGA+GGG - Chr4:37834634-37834653 MsG0480020269.01.T01:intron 70.0%
TGCGAGTCGGAGGGGAAGGG+AGG - Chr4:37834628-37834647 MsG0480020269.01.T01:intron 70.0%
GTCGGAGGGGAAGGGAGGGG+AGG - Chr4:37834633-37834652 MsG0480020269.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 37833525 37839909 37833525 ID=MsG0480020269.01;Name=MsG0480020269.01
Chr4 mRNA 37833525 37839909 37833525 ID=MsG0480020269.01.T01;Parent=MsG0480020269.01;Name=MsG0480020269.01.T01;_AED=0.46;_eAED=0.57;_QI=0|0|0|1|0|0|4|0|216
Chr4 exon 37839640 37839909 37839640 ID=MsG0480020269.01.T01:exon:2772;Parent=MsG0480020269.01.T01
Chr4 exon 37839101 37839218 37839101 ID=MsG0480020269.01.T01:exon:2773;Parent=MsG0480020269.01.T01
Chr4 exon 37837337 37837491 37837337 ID=MsG0480020269.01.T01:exon:2774;Parent=MsG0480020269.01.T01
Chr4 exon 37833525 37833632 37833525 ID=MsG0480020269.01.T01:exon:2775;Parent=MsG0480020269.01.T01
Chr4 CDS 37839640 37839909 37839640 ID=MsG0480020269.01.T01:cds;Parent=MsG0480020269.01.T01
Chr4 CDS 37839101 37839218 37839101 ID=MsG0480020269.01.T01:cds;Parent=MsG0480020269.01.T01
Chr4 CDS 37837337 37837491 37837337 ID=MsG0480020269.01.T01:cds;Parent=MsG0480020269.01.T01
Chr4 CDS 37833525 37833632 37833525 ID=MsG0480020269.01.T01:cds;Parent=MsG0480020269.01.T01
Gene Sequence

>MsG0480020269.01.T01

TTGATTATTGAATCAATGGCGTCAAGCACAGTATACAATTTTCCAACGCTCTTTACTTATTCCTCTTTCTCTGCATACAAAAAACCCCAACCTAATCTCTCCCTCTGTTTCAACCCTCCTTCTATTAAACCTTCTTCCAGGTCAAGACTTTGTGTTGCCGCGATTTTGCCACAAAAGCTTCCCCATCGGCGCCGAGTACTTAGAGTTCATGGTTTGCTTGGTGATGATTATGTCACTTCCCCTTTACCAGAATCAAACATTTCTCAACCGGTTTCGTGTCGGTGTCGGACACTGACACGTGTCCGAGGGACACGCCTAATCCGAGGAGTGTCCGTGCTTCATAGCACTGAATTGTGTCAGTGTCAAGGTCGTGCCCGTCCGTATCCGTTATGCTATTATACTTTGCATATGCAGGGTGCTAGTATTGACTTAAATCTTCCAAGACGAAGTTTGCTTGTACAATTTACATGTGATTTGTGCGATGAAAGAACAGAGAGGCTTGTAAACCGATTAGCTTATGAAAGGGGTGCCGTTTTTGTACAGTGTGCAGGCTGTCAACGACTTCACAAATTAGTTGACAATCTTGGACTCATAACGGAGTATGACTTTCGGGAGAAAACGAATGCAGACTCAGAAATTGATCAAATTTGA

Protein sequence

>MsG0480020269.01.T01

LIIESMASSTVYNFPTLFTYSSFSAYKKPQPNLSLCFNPPSIKPSSRSRLCVAAILPQKLPHRRRVLRVHGLLGDDYVTSPLPESNISQPVSCRCRTLTRVRGTRLIRGVSVLHSTELCQCQGRARPYPLCYYTLHMQGASIDLNLPRRSLLVQFTCDLCDERTERLVNRLAYERGAVFVQCAGCQRLHKLVDNLGLITEYDFREKTNADSEIDQI*