AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112560 MtrunA17_Chr1g0170661 98.958 96 1 0 1 96 1 96 2.46e-66 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112560 AT1G72020.1 69.072 97 29 1 1 96 1 97 2.73e-45 141

Find 44 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCATATTGTATTAATA+TGG 0.223492 1_3:-27544182 None:intergenic
AACAATAATCAGATGGATTT+GGG 0.242746 1_3:+27543898 Msa0112560:three_prime_UTR
CTAGACTAGCATATTGGTTT+TGG 0.253646 1_3:+27543925 Msa0112560:three_prime_UTR
TAACAATAATCAGATGGATT+TGG 0.267194 1_3:+27543897 Msa0112560:three_prime_UTR
GTGAGGGATTTGACCTGATT+TGG 0.278527 1_3:-27540395 None:intergenic
AATGTCCAAGCACAAATATT+TGG 0.313332 1_3:-27544041 None:intergenic
CTTGGACAAGATGAAGTATC+AGG 0.339393 1_3:+27543753 Msa0112560:CDS
TTGATGAAGTTGGTTATTGC+AGG 0.379507 1_3:+27544130 Msa0112560:three_prime_UTR
GAATCCTCCATTTCCAAATC+AGG 0.384825 1_3:+27540382 Msa0112560:CDS
TGATTATTACAAGAGATATA+TGG 0.396470 1_3:-27544004 None:intergenic
CATCTGATTATTGTTACAAA+TGG 0.398465 1_3:-27543890 None:intergenic
GGGATCCTAGACTAGCATAT+TGG 0.403278 1_3:+27543919 Msa0112560:three_prime_UTR
TGTAGAGGATTTCATTCAAC+TGG 0.416935 1_3:+27543661 Msa0112560:CDS
CTTCAGTGGTTTGATGAAGT+TGG 0.416950 1_3:+27544120 Msa0112560:three_prime_UTR
CAGCAAAAGAAGACAGCATC+TGG 0.440272 1_3:+27543850 Msa0112560:CDS
GATTTGACCTGATTTGGAAA+TGG 0.455354 1_3:-27540389 None:intergenic
TTGTTAAGCTTGGCGAAACT+AGG 0.466604 1_3:+27540236 Msa0112560:five_prime_UTR
GAAACACAAATTTCTTTCGA+AGG 0.478060 1_3:+27540273 Msa0112560:five_prime_UTR
GTGTTCACAGCTTTCAGCAT+TGG 0.501579 1_3:+27543796 Msa0112560:CDS
TTGACCTGATTTGGAAATGG+AGG 0.513126 1_3:-27540386 None:intergenic
TTCAACTGGCGTGAAGAGGA+TGG 0.515922 1_3:+27543675 Msa0112560:CDS
CAAAACCAATATGCTAGTCT+AGG 0.520108 1_3:-27543924 None:intergenic
TGCATATCACATGTACAACT+TGG 0.529028 1_3:+27543735 Msa0112560:CDS
TAATGCCAAATATTTGTGCT+TGG 0.529346 1_3:+27544036 Msa0112560:three_prime_UTR
TGTTAAGCTTGGCGAAACTA+GGG 0.529654 1_3:+27540237 Msa0112560:five_prime_UTR
TTCAGGTGGTGGTTCTTCAG+TGG 0.534192 1_3:+27544106 Msa0112560:three_prime_UTR
ATATGGAAAGAAACAAATGA+GGG 0.537796 1_3:-27544165 None:intergenic
AAGAGGATGGGAGGTGGACA+TGG 0.543948 1_3:+27543688 Msa0112560:CDS
AATATGGAAAGAAACAAATG+AGG 0.550114 1_3:-27544166 None:intergenic
GGCGTGAAGAGGATGGGAGG+TGG 0.551979 1_3:+27543682 Msa0112560:CDS
CTTGAAAGGAAATATAGACT+TGG 0.553076 1_3:+27544071 Msa0112560:three_prime_UTR
TTCATTCAACTGGCGTGAAG+AGG 0.553273 1_3:+27543671 Msa0112560:CDS
CATTTGTAACAATAATCAGA+TGG 0.565224 1_3:+27543891 Msa0112560:three_prime_UTR
GCATATACTCTGGCTCGCTA+TGG 0.570951 1_3:-27543711 None:intergenic
TCAACTGGCGTGAAGAGGAT+GGG 0.574066 1_3:+27543676 Msa0112560:CDS
TGGAAAATGACTGCGTACAC+AGG 0.594891 1_3:-27543829 None:intergenic
TTGGACAAGATGAAGTATCA+GGG 0.612137 1_3:+27543754 Msa0112560:CDS
TGATATGCATGCATATACTC+TGG 0.624731 1_3:-27543721 None:intergenic
ATAACGATGGCATTGAACAA+CGG 0.641834 1_3:+27540325 Msa0112560:exon
TATGTTGTGACAGTGTGTAG+AGG 0.643323 1_3:+27543646 Msa0112560:intron
ACAATAATCAGATGGATTTG+GGG 0.667145 1_3:+27543899 Msa0112560:three_prime_UTR
AATCGAATTTGCGATAACGA+TGG 0.672937 1_3:+27540312 Msa0112560:exon
ACTGGCGTGAAGAGGATGGG+AGG 0.681452 1_3:+27543679 Msa0112560:CDS
TATGGAAAGAAACAAATGAG+GGG 0.695575 1_3:-27544164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATAAATAAAAAAAA+TGG + chr1_3:27541456-27541475 Msa0112560:intron 0.0%
!!! AGATTTGATTTATTAATAAA+TGG + chr1_3:27540524-27540543 Msa0112560:intron 10.0%
!! TAATTATGTAAATAATTAGT+TGG - chr1_3:27542476-27542495 None:intergenic 10.0%
!!! AAAAGTTGTTTTTTTTAATA+GGG + chr1_3:27542612-27542631 Msa0112560:intron 10.0%
!!! TTATATTAGGGTTTTTATTT+GGG + chr1_3:27540487-27540506 Msa0112560:intron 15.0%
!! TTGATTTATTAATAAATGGA+TGG + chr1_3:27540528-27540547 Msa0112560:intron 15.0%
!! TGATTTATTAATAAATGGAT+GGG + chr1_3:27540529-27540548 Msa0112560:intron 15.0%
!!! TTAGGTTTTTTTTATCTAAA+TGG + chr1_3:27540741-27540760 Msa0112560:intron 15.0%
!! TTATGGACATAAATAAATTA+AGG + chr1_3:27541176-27541195 Msa0112560:intron 15.0%
!!! AAAGTTGTTTTTTTTAATAG+GGG - chr1_3:27542613-27542632 None:intergenic 15.0%
!!! GAAAGTTGTTTTTTTTAATA+GGG - chr1_3:27541306-27541325 None:intergenic 15.0%
!! TGAAAAACCTAAAATTAATT+GGG - chr1_3:27542059-27542078 None:intergenic 15.0%
!! TTGAAAAACCTAAAATTAAT+TGG - chr1_3:27542060-27542079 None:intergenic 15.0%
!!! ATCATAAACTTAAGTTTTAT+AGG - chr1_3:27542121-27542140 None:intergenic 15.0%
!!! AAACTTAAGTTTATGATTTT+TGG + chr1_3:27542124-27542143 Msa0112560:intron 15.0%
!! AAGAAATAAAAAAATGGAAA+AGG - chr1_3:27542445-27542464 None:intergenic 15.0%
!!! GAAAAGTTGTTTTTTTTAAT+AGG + chr1_3:27542611-27542630 Msa0112560:intron 15.0%
!!! AAAGTTGTTTTTTTTAATAG+GGG + chr1_3:27542613-27542632 Msa0112560:intron 15.0%
!!! AGTTTTATTTATGAATTACA+TGG + chr1_3:27542717-27542736 Msa0112560:intron 15.0%
!!! GTTTTATTTATGAATTACAT+GGG + chr1_3:27542718-27542737 Msa0112560:intron 15.0%
!! TTTGAAAGAAAAAAAAATCA+TGG - chr1_3:27543141-27543160 None:intergenic 15.0%
!!! TTTCATGTTTAATTTTCATA+TGG + chr1_3:27543976-27543995 Msa0112560:three_prime_UTR 15.0%
!!! AAATTTTCCTCAACAATAAT+CGG - chr1_3:27540440-27540459 None:intergenic 20.0%
!!! ATTTTTTTCCCTTTCAATTT+CGG + chr1_3:27540464-27540483 Msa0112560:intron 20.0%
!! TAATATAACCGAAATTGAAA+GGG - chr1_3:27540475-27540494 None:intergenic 20.0%
!! TTTCAATTTCGGTTATATTA+GGG + chr1_3:27540475-27540494 Msa0112560:intron 20.0%
!!! GTTATATTAGGGTTTTTATT+TGG + chr1_3:27540486-27540505 Msa0112560:intron 20.0%
!!! TATATTAGGGTTTTTATTTG+GGG + chr1_3:27540488-27540507 Msa0112560:intron 20.0%
!!! TAATGTTTTAAATTGCGATT+CGG + chr1_3:27540564-27540583 Msa0112560:intron 20.0%
!!! TTGTTGATAAATGTGTTATT+TGG + chr1_3:27540636-27540655 Msa0112560:intron 20.0%
!! TTATTTGACAATTGAACATA+TGG + chr1_3:27541101-27541120 Msa0112560:intron 20.0%
!! AATAAATTAAGGTAGGAATT+TGG + chr1_3:27541187-27541206 Msa0112560:intron 20.0%
!! ATAAATTAAGGTAGGAATTT+GGG + chr1_3:27541188-27541207 Msa0112560:intron 20.0%
!!! AAGTTGTTTTTTTTAATAGG+GGG - chr1_3:27542614-27542633 None:intergenic 20.0%
!!! GGAAAGTTGTTTTTTTTAAT+AGG - chr1_3:27541307-27541326 None:intergenic 20.0%
!!! TTTACCATGATTTTCATTTT+TGG - chr1_3:27541747-27541766 None:intergenic 20.0%
!! ATTTATAAAAGTAGGATTCA+TGG - chr1_3:27541778-27541797 None:intergenic 20.0%
!! GTGAAGTTATTTATAAAAGT+AGG - chr1_3:27541786-27541805 None:intergenic 20.0%
!! TTATAAGCAAATTATGTCAT+AGG - chr1_3:27541824-27541843 None:intergenic 20.0%
!!! TTTTCGAAATTCAAATTAGA+TGG - chr1_3:27541933-27541952 None:intergenic 20.0%
!!! AAAAAACCCCAATTAATTTT+AGG + chr1_3:27542049-27542068 Msa0112560:intron 20.0%
!! GAAAAACCTAAAATTAATTG+GGG - chr1_3:27542058-27542077 None:intergenic 20.0%
!!! TTAAGTTTATGATTTTTGGA+AGG + chr1_3:27542128-27542147 Msa0112560:intron 20.0%
!! TAAAAAAATGGAAAAGGAAT+AGG - chr1_3:27542439-27542458 None:intergenic 20.0%
!!! AAGTTGTTTTTTTTAATAGG+GGG + chr1_3:27542614-27542633 Msa0112560:intron 20.0%
!! TGAATATTATCAATGATACT+AGG - chr1_3:27542688-27542707 None:intergenic 20.0%
!! TGATTATTACAAGAGATATA+TGG - chr1_3:27544007-27544026 None:intergenic 20.0%
!! GGAATCATATTGTATTAATA+TGG - chr1_3:27544185-27544204 None:intergenic 20.0%
! CTAATATAACCGAAATTGAA+AGG - chr1_3:27540476-27540495 None:intergenic 25.0%
! CTTTCAATTTCGGTTATATT+AGG + chr1_3:27540474-27540493 Msa0112560:intron 25.0%
!!! ATATTAGGGTTTTTATTTGG+GGG + chr1_3:27540489-27540508 Msa0112560:intron 25.0%
!!! TTGTGGTTTTGTTTATATTG+TGG + chr1_3:27540587-27540606 Msa0112560:intron 25.0%
! GATTGAGTTTCATTTAGTTA+AGG + chr1_3:27541139-27541158 Msa0112560:intron 25.0%
! GGACATAAATAAATTAAGGT+AGG + chr1_3:27541180-27541199 Msa0112560:intron 25.0%
!! ACTAATTTAGAGTTTGTTCT+GGG - chr1_3:27542084-27542103 None:intergenic 25.0%
!! AACTAATTTAGAGTTTGTTC+TGG - chr1_3:27542085-27542104 None:intergenic 25.0%
! ATTTCAAGATATAGATCTGT+TGG + chr1_3:27542289-27542308 Msa0112560:intron 25.0%
!! TTCTTTGAAAGAATTTCAAC+TGG + chr1_3:27542340-27542359 Msa0112560:intron 25.0%
!! TCTTTGAAAGAATTTCAACT+GGG + chr1_3:27542341-27542360 Msa0112560:intron 25.0%
! AATTAACGGCTTAGATTAAA+TGG + chr1_3:27542807-27542826 Msa0112560:intron 25.0%
! ACATAAGAACAACTATTCAA+TGG + chr1_3:27543030-27543049 Msa0112560:intron 25.0%
! CATAAGAACAACTATTCAAT+GGG + chr1_3:27543031-27543050 Msa0112560:intron 25.0%
! TGTTAAATACAGTTCTTGAT+TGG + chr1_3:27543434-27543453 Msa0112560:intron 25.0%
! GTTAAATACAGTTCTTGATT+GGG + chr1_3:27543435-27543454 Msa0112560:intron 25.0%
! CATCTGATTATTGTTACAAA+TGG - chr1_3:27543893-27543912 None:intergenic 25.0%
! CATTTGTAACAATAATCAGA+TGG + chr1_3:27543891-27543910 Msa0112560:three_prime_UTR 25.0%
!! TAACAATAATCAGATGGATT+TGG + chr1_3:27543897-27543916 Msa0112560:three_prime_UTR 25.0%
!! AACAATAATCAGATGGATTT+GGG + chr1_3:27543898-27543917 Msa0112560:three_prime_UTR 25.0%
! ATATGGAAAGAAACAAATGA+GGG - chr1_3:27544168-27544187 None:intergenic 25.0%
! AATATGGAAAGAAACAAATG+AGG - chr1_3:27544169-27544188 None:intergenic 25.0%
GAAACACAAATTTCTTTCGA+AGG + chr1_3:27540273-27540292 Msa0112560:five_prime_UTR 30.0%
TTGTATAACGATGTTGTTGA+AGG + chr1_3:27540676-27540695 Msa0112560:intron 30.0%
!! TAGCTTTGTTTCATTCTGTT+AGG + chr1_3:27540920-27540939 Msa0112560:intron 30.0%
TTCATATCCTCAAGTTATTG+AGG + chr1_3:27540957-27540976 Msa0112560:intron 30.0%
TCATATCCTCAAGTTATTGA+GGG + chr1_3:27540958-27540977 Msa0112560:intron 30.0%
AATGCATAAGTGAATAGCTT+TGG + chr1_3:27540995-27541014 Msa0112560:intron 30.0%
ATTTAAATCCAGCGAAAACA+TGG - chr1_3:27541051-27541070 None:intergenic 30.0%
ACTAAATGAAACTCAATCAC+AGG - chr1_3:27541137-27541156 None:intergenic 30.0%
! AGGCTTCATTGTTGTTATTA+TGG + chr1_3:27541159-27541178 Msa0112560:intron 30.0%
! GTAGGAATTTGGGTTTAATT+AGG + chr1_3:27541198-27541217 Msa0112560:intron 30.0%
GGTTTAATTAGGTCATTATC+TGG + chr1_3:27541209-27541228 Msa0112560:intron 30.0%
! GGTATTTTACCATAGTATCA+TGG + chr1_3:27541230-27541249 Msa0112560:intron 30.0%
CGTTTGTAGAGTTTGTAAAT+TGG - chr1_3:27541570-27541589 None:intergenic 30.0%
!!! CCATGATTTTCATTTTTGGT+AGG - chr1_3:27541743-27541762 None:intergenic 30.0%
CCTACCAAAAATGAAAATCA+TGG + chr1_3:27541740-27541759 Msa0112560:intron 30.0%
TATAAAAGTAGGATTCATGG+TGG - chr1_3:27541775-27541794 None:intergenic 30.0%
!! AGCTCTAAAACAAATCTGAA+TGG - chr1_3:27541848-27541867 None:intergenic 30.0%
ATATGGAAGAAGAGAGAAAA+CGG - chr1_3:27541896-27541915 None:intergenic 30.0%
TCTGTTTATGCAAAGTTTGA+AGG + chr1_3:27541972-27541991 Msa0112560:intron 30.0%
TATGCAAAGTTTGAAGGATT+TGG + chr1_3:27541978-27541997 Msa0112560:intron 30.0%
AACAAAGGGTTTGAATTTGA+AGG + chr1_3:27542012-27542031 Msa0112560:intron 30.0%
!! AGTTTATGATTTTTGGAAGG+AGG + chr1_3:27542131-27542150 Msa0112560:intron 30.0%
AAGATGAAGATGATGTTCTT+GGG + chr1_3:27542390-27542409 Msa0112560:intron 30.0%
GCCATTGGATTAACAATTAA+CGG + chr1_3:27542793-27542812 Msa0112560:intron 30.0%
!! TTGTACATTTTGATCCAAGA+TGG - chr1_3:27542897-27542916 None:intergenic 30.0%
TTCAGAATTAAACTCTTGGA+AGG + chr1_3:27543054-27543073 Msa0112560:intron 30.0%
TCAGAATTAAACTCTTGGAA+GGG + chr1_3:27543055-27543074 Msa0112560:intron 30.0%
AGTGAGAAAAAATGCATCAA+TGG + chr1_3:27543090-27543109 Msa0112560:intron 30.0%
AGAAAAAATGCATCAATGGT+GGG + chr1_3:27543094-27543113 Msa0112560:intron 30.0%
! AAAACATTCTATGTTGGTTG+TGG + chr1_3:27543336-27543355 Msa0112560:intron 30.0%
! AAACATTCTATGTTGGTTGT+GGG + chr1_3:27543337-27543356 Msa0112560:intron 30.0%
TGATTGGGCATACAAAATAT+TGG + chr1_3:27543450-27543469 Msa0112560:intron 30.0%
AGTCATCGGATTAAAATAGA+TGG - chr1_3:27543511-27543530 None:intergenic 30.0%
!!! GAGAATGACTTTTTTTTGTG+TGG - chr1_3:27543554-27543573 None:intergenic 30.0%
TTTCCTAGACATCTTAAAAC+AGG - chr1_3:27543588-27543607 None:intergenic 30.0%
! ACAATAATCAGATGGATTTG+GGG + chr1_3:27543899-27543918 Msa0112560:three_prime_UTR 30.0%
TAATGCCAAATATTTGTGCT+TGG + chr1_3:27544036-27544055 Msa0112560:three_prime_UTR 30.0%
AATGTCCAAGCACAAATATT+TGG - chr1_3:27544044-27544063 None:intergenic 30.0%
! GGACATTTTTATGTCTTGAA+AGG + chr1_3:27544057-27544076 Msa0112560:three_prime_UTR 30.0%
CTTGAAAGGAAATATAGACT+TGG + chr1_3:27544071-27544090 Msa0112560:three_prime_UTR 30.0%
TATGGAAAGAAACAAATGAG+GGG - chr1_3:27544167-27544186 None:intergenic 30.0%
! CGGATACATTTTGTTAAGCT+TGG + chr1_3:27540226-27540245 Msa0112560:five_prime_UTR 35.0%
AATCGAATTTGCGATAACGA+TGG + chr1_3:27540312-27540331 Msa0112560:exon 35.0%
! ATAACGATGGCATTGAACAA+CGG + chr1_3:27540325-27540344 Msa0112560:exon 35.0%
!! GATTTGACCTGATTTGGAAA+TGG - chr1_3:27540392-27540411 None:intergenic 35.0%
GAACATGAAAGAAAAGGTGA+GGG - chr1_3:27540414-27540433 None:intergenic 35.0%
TGAACATGAAAGAAAAGGTG+AGG - chr1_3:27540415-27540434 None:intergenic 35.0%
CGGATTGAACATGAAAGAAA+AGG - chr1_3:27540420-27540439 None:intergenic 35.0%
GTTCAATCCGATTATTGTTG+AGG + chr1_3:27540430-27540449 Msa0112560:intron 35.0%
!! TTTAAATTGCGATTCGGTTG+TGG + chr1_3:27540570-27540589 Msa0112560:intron 35.0%
TTATACAATTACACTCGCGA+CGG - chr1_3:27540664-27540683 None:intergenic 35.0%
AGTCTACTAACAAAGATTCG+AGG - chr1_3:27540708-27540727 None:intergenic 35.0%
AGACTATTCTAGTGACTGTT+AGG + chr1_3:27540723-27540742 Msa0112560:intron 35.0%
CTAATAACACCAACCTTAGA+GGG + chr1_3:27540814-27540833 Msa0112560:intron 35.0%
TTCAAAACAAAAGCCCTCTA+AGG - chr1_3:27540830-27540849 None:intergenic 35.0%
!!! GAGGGCTTTTGTTTTGAAAT+CGG + chr1_3:27540832-27540851 Msa0112560:intron 35.0%
!!! CTTTTGTTTTGAAATCGGTG+TGG + chr1_3:27540837-27540856 Msa0112560:intron 35.0%
CATATCCTCAAGTTATTGAG+GGG + chr1_3:27540959-27540978 Msa0112560:intron 35.0%
CGAAAACATGGACAACAATA+AGG - chr1_3:27541039-27541058 None:intergenic 35.0%
!! GCATTTTAGCCATGATACTA+TGG - chr1_3:27541242-27541261 None:intergenic 35.0%
! TCATGGCTAAAATGCACTTT+TGG + chr1_3:27541247-27541266 Msa0112560:intron 35.0%
GAGTTTGTAAATTGGTTGCT+GGG - chr1_3:27541562-27541581 None:intergenic 35.0%
AGAGTTTGTAAATTGGTTGC+TGG - chr1_3:27541563-27541582 None:intergenic 35.0%
TTGGAAGAAGAAGCTAACAA+AGG + chr1_3:27541997-27542016 Msa0112560:intron 35.0%
TGGAAGAAGAAGCTAACAAA+GGG + chr1_3:27541998-27542017 Msa0112560:intron 35.0%
TTTGAATTTGAAGGAGCAAG+TGG + chr1_3:27542021-27542040 Msa0112560:intron 35.0%
! TGTTGTTCAGGTTCTTCTTT+AGG + chr1_3:27542172-27542191 Msa0112560:intron 35.0%
! TGTTGTTGTTGCTGCTATTA+GGG - chr1_3:27542243-27542262 None:intergenic 35.0%
! TTGTTGTTGTTGCTGCTATT+AGG - chr1_3:27542244-27542263 None:intergenic 35.0%
AGCAACAACAACAATAACAC+AGG + chr1_3:27542250-27542269 Msa0112560:intron 35.0%
AGATATAGATCTGTTGGATG+TGG + chr1_3:27542295-27542314 Msa0112560:intron 35.0%
GAAAGAATTTCAACTGGGTT+TGG + chr1_3:27542346-27542365 Msa0112560:intron 35.0%
GAAGATGAAGATGATGTTCT+TGG + chr1_3:27542389-27542408 Msa0112560:intron 35.0%
ATAGGCACATTTAACATCCA+TGG - chr1_3:27542421-27542440 None:intergenic 35.0%
! ACTAGGCTAAAATGCACTTT+TGG - chr1_3:27542671-27542690 None:intergenic 35.0%
CCTCTAACTCTCACATAAAA+AGG - chr1_3:27542763-27542782 None:intergenic 35.0%
! CCTTTTTATGTGAGAGTTAG+AGG + chr1_3:27542760-27542779 Msa0112560:intron 35.0%
GCCGTTAATTGTTAATCCAA+TGG - chr1_3:27542797-27542816 None:intergenic 35.0%
!! ATTTTGATCCAAGATGGCAA+TGG - chr1_3:27542891-27542910 None:intergenic 35.0%
TGGGTTCAGAATTAAACTCT+TGG + chr1_3:27543050-27543069 Msa0112560:intron 35.0%
GAGAAAAAATGCATCAATGG+TGG + chr1_3:27543093-27543112 Msa0112560:intron 35.0%
GAAAAAATGCATCAATGGTG+GGG + chr1_3:27543095-27543114 Msa0112560:intron 35.0%
AAAAAATGCATCAATGGTGG+GGG + chr1_3:27543096-27543115 Msa0112560:intron 35.0%
AAAGCTAACAATATCGCCAT+TGG + chr1_3:27543364-27543383 Msa0112560:intron 35.0%
CATACAAAATATTGGCGTCT+GGG + chr1_3:27543458-27543477 Msa0112560:intron 35.0%
ATACAAAATATTGGCGTCTG+GGG + chr1_3:27543459-27543478 Msa0112560:intron 35.0%
ATGAGGTTCTTGTTAGTCAT+CGG - chr1_3:27543525-27543544 None:intergenic 35.0%
! TTTTTGTGTGGAAACGAATG+AGG - chr1_3:27543542-27543561 None:intergenic 35.0%
!!! TCTCCTGTTTTAAGATGTCT+AGG + chr1_3:27543582-27543601 Msa0112560:intron 35.0%
TGTAGAGGATTTCATTCAAC+TGG + chr1_3:27543661-27543680 Msa0112560:CDS 35.0%
TGATATGCATGCATATACTC+TGG - chr1_3:27543724-27543743 None:intergenic 35.0%
TGCATATCACATGTACAACT+TGG + chr1_3:27543735-27543754 Msa0112560:CDS 35.0%
! TTGGACAAGATGAAGTATCA+GGG + chr1_3:27543754-27543773 Msa0112560:CDS 35.0%
! CAAAACCAATATGCTAGTCT+AGG - chr1_3:27543927-27543946 None:intergenic 35.0%
!!! CTAGACTAGCATATTGGTTT+TGG + chr1_3:27543925-27543944 Msa0112560:three_prime_UTR 35.0%
! TTGATGAAGTTGGTTATTGC+AGG + chr1_3:27544130-27544149 Msa0112560:three_prime_UTR 35.0%
TTGTTAAGCTTGGCGAAACT+AGG + chr1_3:27540236-27540255 Msa0112560:five_prime_UTR 40.0%
TGTTAAGCTTGGCGAAACTA+GGG + chr1_3:27540237-27540256 Msa0112560:five_prime_UTR 40.0%
GAATCCTCCATTTCCAAATC+AGG + chr1_3:27540382-27540401 Msa0112560:CDS 40.0%
!! TTGACCTGATTTGGAAATGG+AGG - chr1_3:27540389-27540408 None:intergenic 40.0%
!! CCTCTAAGGTTGGTGTTATT+AGG - chr1_3:27540816-27540835 None:intergenic 40.0%
CCTAATAACACCAACCTTAG+AGG + chr1_3:27540813-27540832 Msa0112560:intron 40.0%
!! AAACAAAAGCCCTCTAAGGT+TGG - chr1_3:27540826-27540845 None:intergenic 40.0%
ACGAATATGAAGGGGAAAAG+AGG + chr1_3:27540875-27540894 Msa0112560:intron 40.0%
TCAATCCCCTCAATAACTTG+AGG - chr1_3:27540967-27540986 None:intergenic 40.0%
! ATTGTTGTCCATGTTTTCGC+TGG + chr1_3:27541040-27541059 Msa0112560:intron 40.0%
TGACCGAGTCAAAATTGAAG+GGG - chr1_3:27541366-27541385 None:intergenic 40.0%
CTGACCGAGTCAAAATTGAA+GGG - chr1_3:27541367-27541386 None:intergenic 40.0%
GATGAATCGATGACTGTTCT+GGG - chr1_3:27541496-27541515 None:intergenic 40.0%
TGATGAATCGATGACTGTTC+TGG - chr1_3:27541497-27541516 None:intergenic 40.0%
! TGTTGCTGATACAGTGTTGA+TGG - chr1_3:27541678-27541697 None:intergenic 40.0%
ACTGTGTAAGAGAAGAGAAG+AGG + chr1_3:27541868-27541887 Msa0112560:intron 40.0%
TGGTTGTGAAATCGAGCATA+TGG - chr1_3:27541913-27541932 None:intergenic 40.0%
!! TTTTTGGAAGGAGGAAGATG+AGG + chr1_3:27542140-27542159 Msa0112560:intron 40.0%
TCTGACCCAGTCAAAATTGA+AGG + chr1_3:27542550-27542569 Msa0112560:intron 40.0%
CTGACCCAGTCAAAATTGAA+GGG + chr1_3:27542551-27542570 Msa0112560:intron 40.0%
TGACCCAGTCAAAATTGAAG+GGG + chr1_3:27542552-27542571 Msa0112560:intron 40.0%
TTGTTAATCCAATGGCTACC+AGG - chr1_3:27542789-27542808 None:intergenic 40.0%
GTGAAGATAAGTGTCATGTG+AGG - chr1_3:27542845-27542864 None:intergenic 40.0%
TGATTCATGCGAAACATCCA+AGG - chr1_3:27542951-27542970 None:intergenic 40.0%
ATCTTCGTTAGTGGCATAGT+TGG + chr1_3:27543209-27543228 Msa0112560:intron 40.0%
GGCTGGAAAACATTCTATGT+TGG + chr1_3:27543330-27543349 Msa0112560:intron 40.0%
GCATACAAAATATTGGCGTC+TGG + chr1_3:27543457-27543476 Msa0112560:intron 40.0%
TATGTTGTGACAGTGTGTAG+AGG + chr1_3:27543646-27543665 Msa0112560:intron 40.0%
! CTTGGACAAGATGAAGTATC+AGG + chr1_3:27543753-27543772 Msa0112560:CDS 40.0%
!! CTTGGAATGTCCTGTTTTTC+AGG + chr1_3:27544089-27544108 Msa0112560:three_prime_UTR 40.0%
CTTCAGTGGTTTGATGAAGT+TGG + chr1_3:27544120-27544139 Msa0112560:three_prime_UTR 40.0%
GTGAGGGATTTGACCTGATT+TGG - chr1_3:27540398-27540417 None:intergenic 45.0%
!! GGATGAGAAGTGTTTGAGCT+TGG + chr1_3:27540762-27540781 Msa0112560:intron 45.0%
TGAAATCGGTGTGGAAGTGA+AGG + chr1_3:27540846-27540865 Msa0112560:intron 45.0%
AAGGAGTCGGACGAATATGA+AGG + chr1_3:27540865-27540884 Msa0112560:intron 45.0%
AGGAGTCGGACGAATATGAA+GGG + chr1_3:27540866-27540885 Msa0112560:intron 45.0%
TTGCTACGGAGCCAAACATA+GGG - chr1_3:27541275-27541294 None:intergenic 45.0%
ATTGCTACGGAGCCAAACAT+AGG - chr1_3:27541276-27541295 None:intergenic 45.0%
!! GTTTGGCTCCGTAGCAATTT+TGG + chr1_3:27541278-27541297 Msa0112560:intron 45.0%
ATAGGGGGCCAAAATTGCTA+CGG - chr1_3:27542629-27542648 None:intergenic 45.0%
TTGCAAAAGGGGGTGAAGTT+GGG - chr1_3:27542583-27542602 None:intergenic 45.0%
!!! TGGCCCCTTCAATTTTGACT+CGG + chr1_3:27541360-27541379 Msa0112560:intron 45.0%
CCTGACCGAGTCAAAATTGA+AGG - chr1_3:27541368-27541387 None:intergenic 45.0%
!!! CCTTCAATTTTGACTCGGTC+AGG + chr1_3:27541365-27541384 Msa0112560:intron 45.0%
! GGAGGTAGTTGTGTTGTTGA+AGG - chr1_3:27541526-27541545 None:intergenic 45.0%
ATCCTCCTTAACCACAATGC+CGG - chr1_3:27541636-27541655 None:intergenic 45.0%
GAATTTGAAGGAGCAAGTGG+TGG + chr1_3:27542024-27542043 Msa0112560:intron 45.0%
!! AGGAAGGAGAAGTGTTGTTC+AGG + chr1_3:27542160-27542179 Msa0112560:intron 45.0%
TGTGGTAGCAGAAGATTCTC+TGG + chr1_3:27542313-27542332 Msa0112560:intron 45.0%
GATGTTCTTGGGTGAAACCA+TGG + chr1_3:27542401-27542420 Msa0112560:intron 45.0%
!!! TGGCCCCTTCAATTTTGACT+GGG - chr1_3:27541360-27541379 None:intergenic 45.0%
TTGCAAAAGGGGGTGAAGTT+GGG + chr1_3:27542583-27542602 Msa0112560:intron 45.0%
ATAGGGGGCCAAAATTGCTA+CGG + chr1_3:27542629-27542648 Msa0112560:intron 45.0%
TGTGAGAGTTAGAGGATTCC+TGG + chr1_3:27542768-27542787 Msa0112560:intron 45.0%
AATGTCTGTGAGATTGCGTG+AGG - chr1_3:27542928-27542947 None:intergenic 45.0%
GCAATCTCACAGACATTCCT+TGG + chr1_3:27542931-27542950 Msa0112560:intron 45.0%
TCTCACGCACATTCACATCT+TGG - chr1_3:27543173-27543192 None:intergenic 45.0%
ATGCTTGGCATCTTCGTTAG+TGG + chr1_3:27543200-27543219 Msa0112560:intron 45.0%
GTTAGTGGCATAGTTGGTTG+TGG + chr1_3:27543215-27543234 Msa0112560:intron 45.0%
TTCCTCTCCAACTACTGTTG+AGG + chr1_3:27543269-27543288 Msa0112560:intron 45.0%
! TTTGGAGCCTCAACAGTAGT+TGG - chr1_3:27543279-27543298 None:intergenic 45.0%
!!! TGAAATGGGGATGCTGGTTT+TGG - chr1_3:27543297-27543316 None:intergenic 45.0%
AACCAGCATCCCCATTTCAA+TGG + chr1_3:27543298-27543317 Msa0112560:intron 45.0%
GATGCCACACCATTGAAATG+GGG - chr1_3:27543310-27543329 None:intergenic 45.0%
CGATGCCACACCATTGAAAT+GGG - chr1_3:27543311-27543330 None:intergenic 45.0%
CCATTTCAATGGTGTGGCAT+CGG + chr1_3:27543309-27543328 Msa0112560:intron 45.0%
GCTAACAATATCGCCATTGG+TGG + chr1_3:27543367-27543386 Msa0112560:intron 45.0%
! ACAATATCGCCATTGGTGGT+AGG + chr1_3:27543371-27543390 Msa0112560:intron 45.0%
AGGGGATGAATCAGTTTCAG+TGG + chr1_3:27543407-27543426 Msa0112560:intron 45.0%
TTCATTCAACTGGCGTGAAG+AGG + chr1_3:27543671-27543690 Msa0112560:CDS 45.0%
GTGTTCACAGCTTTCAGCAT+TGG + chr1_3:27543796-27543815 Msa0112560:CDS 45.0%
TGGAAAATGACTGCGTACAC+AGG - chr1_3:27543832-27543851 None:intergenic 45.0%
! CAGATGCTGTCTTCTTTTGC+TGG - chr1_3:27543852-27543871 None:intergenic 45.0%
CAGCAAAAGAAGACAGCATC+TGG + chr1_3:27543850-27543869 Msa0112560:CDS 45.0%
GGGATCCTAGACTAGCATAT+TGG + chr1_3:27543919-27543938 Msa0112560:three_prime_UTR 45.0%
!!! GGAATGTCCTGTTTTTCAGG+TGG + chr1_3:27544092-27544111 Msa0112560:three_prime_UTR 45.0%
!!! ATGTCCTGTTTTTCAGGTGG+TGG + chr1_3:27544095-27544114 Msa0112560:three_prime_UTR 45.0%
AGAACCACCACCTGAAAAAC+AGG - chr1_3:27544102-27544121 None:intergenic 45.0%
!! ATAAAAAAGAAATAAAAAAA+TGG - chr1_3:27542451-27542470 None:intergenic 5.0%
GGAGTCGGACGAATATGAAG+GGG + chr1_3:27540867-27540886 Msa0112560:intron 50.0%
! CACTTTTGGCCCCCTATGTT+TGG + chr1_3:27541261-27541280 Msa0112560:intron 50.0%
TGCTACGGAGCCAAACATAG+GGG - chr1_3:27541274-27541293 None:intergenic 50.0%
TGCAAAAGGGGGTGAAGTTG+GGG - chr1_3:27542584-27542603 None:intergenic 50.0%
GTTGCAAAAGGGGGTGAAGT+TGG - chr1_3:27542582-27542601 None:intergenic 50.0%
! CTTCACCCCCTTTTGCAACT+CGG + chr1_3:27541337-27541356 Msa0112560:intron 50.0%
GCCACGTGTCAACCATCTAA+GGG - chr1_3:27542527-27542546 None:intergenic 50.0%
TGCCACGTGTCAACCATCTA+AGG - chr1_3:27542526-27542545 None:intergenic 50.0%
!!! TGGTTTTGTTCCCGGCATTG+TGG + chr1_3:27541622-27541641 Msa0112560:intron 50.0%
TGTTCCCGGCATTGTGGTTA+AGG + chr1_3:27541628-27541647 Msa0112560:intron 50.0%
TCCTCCTTAACCACAATGCC+GGG - chr1_3:27541635-27541654 None:intergenic 50.0%
TGGAAGGAGGAAGATGAGGA+AGG + chr1_3:27542144-27542163 Msa0112560:intron 50.0%
TGCCACGTGTCAACCATCTA+AGG + chr1_3:27542526-27542545 Msa0112560:intron 50.0%
GCCACGTGTCAACCATCTAA+GGG + chr1_3:27542527-27542546 Msa0112560:intron 50.0%
ACCCTTAGATGGTTGACACG+TGG - chr1_3:27542531-27542550 None:intergenic 50.0%
!! GTGGCCCCTTCAATTTTGAC+TGG - chr1_3:27541359-27541378 None:intergenic 50.0%
! CTTCACCCCCTTTTGCAACT+CGG - chr1_3:27541337-27541356 None:intergenic 50.0%
GTTGCAAAAGGGGGTGAAGT+TGG + chr1_3:27542582-27542601 Msa0112560:intron 50.0%
TGCAAAAGGGGGTGAAGTTG+GGG + chr1_3:27542584-27542603 Msa0112560:intron 50.0%
TAGGGGGCCAAAATTGCTAC+GGG + chr1_3:27542630-27542649 Msa0112560:intron 50.0%
! GTTTGGCCCCGTAGCAATTT+TGG - chr1_3:27542640-27542659 None:intergenic 50.0%
ATTGCTACGGGGCCAAACTT+AGG + chr1_3:27542642-27542661 Msa0112560:intron 50.0%
TTGCTACGGGGCCAAACTTA+GGG + chr1_3:27542643-27542662 Msa0112560:intron 50.0%
! CACTTTTGGCCCCCTAAGTT+TGG - chr1_3:27542657-27542676 None:intergenic 50.0%
AGAGGATTCCTGGTAGCCAT+TGG + chr1_3:27542778-27542797 Msa0112560:intron 50.0%
AAGATGGCAATGGCAACAGG+AGG - chr1_3:27542881-27542900 None:intergenic 50.0%
TCCTGTTGCCATTGCCATCT+TGG + chr1_3:27542880-27542899 Msa0112560:intron 50.0%
TCCAAGATGGCAATGGCAAC+AGG - chr1_3:27542884-27542903 None:intergenic 50.0%
TCTGTGAGATTGCGTGAGGA+TGG - chr1_3:27542924-27542943 None:intergenic 50.0%
GCGTGAGAGAGTTGTATGCT+TGG + chr1_3:27543185-27543204 Msa0112560:intron 50.0%
AGTGGCATAGTTGGTTGTGG+TGG + chr1_3:27543218-27543237 Msa0112560:intron 50.0%
AACCCTGTTGCTCGCTTGAT+GGG - chr1_3:27543251-27543270 None:intergenic 50.0%
AGCCTCAACAGTAGTTGGAG+AGG - chr1_3:27543274-27543293 None:intergenic 50.0%
CACCATTGAAATGGGGATGC+TGG - chr1_3:27543303-27543322 None:intergenic 50.0%
GCATCCCCATTTCAATGGTG+TGG + chr1_3:27543303-27543322 Msa0112560:intron 50.0%
CCGATGCCACACCATTGAAA+TGG - chr1_3:27543312-27543331 None:intergenic 50.0%
! ACTGATTCATCCCCTCCCAT+GGG - chr1_3:27543402-27543421 None:intergenic 50.0%
! AACTGATTCATCCCCTCCCA+TGG - chr1_3:27543403-27543422 None:intergenic 50.0%
TTCAACTGGCGTGAAGAGGA+TGG + chr1_3:27543675-27543694 Msa0112560:CDS 50.0%
TCAACTGGCGTGAAGAGGAT+GGG + chr1_3:27543676-27543695 Msa0112560:CDS 50.0%
! GCATATACTCTGGCTCGCTA+TGG - chr1_3:27543714-27543733 None:intergenic 50.0%
! TTCAGGTGGTGGTTCTTCAG+TGG + chr1_3:27544106-27544125 Msa0112560:three_prime_UTR 50.0%
CGGTGTGGAAGTGAAGGAGT+CGG + chr1_3:27540852-27540871 Msa0112560:intron 55.0%
GCTACGGAGCCAAACATAGG+GGG - chr1_3:27541273-27541292 None:intergenic 55.0%
CAAAAGGGGGTGAAGTTGGG+GGG - chr1_3:27542586-27542605 None:intergenic 55.0%
GCAAAAGGGGGTGAAGTTGG+GGG - chr1_3:27542585-27542604 None:intergenic 55.0%
GCCCTTAGATGGTTGACACG+TGG + chr1_3:27541387-27541406 Msa0112560:intron 55.0%
TTGCTGGGAGTAGAGAGAGG+AGG - chr1_3:27541547-27541566 None:intergenic 55.0%
TGGTTGCTGGGAGTAGAGAG+AGG - chr1_3:27541550-27541569 None:intergenic 55.0%
CAAACTCGTCTCCGAACTGC+TGG + chr1_3:27541590-27541609 Msa0112560:intron 55.0%
!!! GCTGGTGGTGGTTTTGTTCC+CGG + chr1_3:27541614-27541633 Msa0112560:intron 55.0%
TCCCGGCATTGTGGTTAAGG+AGG + chr1_3:27541631-27541650 Msa0112560:intron 55.0%
GACTGGGTCAGACCCTTAGA+TGG - chr1_3:27542542-27542561 None:intergenic 55.0%
GCAAAAGGGGGTGAAGTTGG+GGG + chr1_3:27542585-27542604 Msa0112560:intron 55.0%
CAAAAGGGGGTGAAGTTGGG+GGG + chr1_3:27542586-27542605 Msa0112560:intron 55.0%
AGGGGGCCAAAATTGCTACG+GGG + chr1_3:27542631-27542650 Msa0112560:intron 55.0%
TGCTACGGGGCCAAACTTAG+GGG + chr1_3:27542644-27542663 Msa0112560:intron 55.0%
ATCCCCATCAAGCGAGCAAC+AGG + chr1_3:27543245-27543264 Msa0112560:intron 55.0%
TCCCCATCAAGCGAGCAACA+GGG + chr1_3:27543246-27543265 Msa0112560:intron 55.0%
ACCCTGTTGCTCGCTTGATG+GGG - chr1_3:27543250-27543269 None:intergenic 55.0%
GAACCCTGTTGCTCGCTTGA+TGG - chr1_3:27543252-27543271 None:intergenic 55.0%
!! TTCAATGGTGTGGCATCGGC+TGG + chr1_3:27543313-27543332 Msa0112560:intron 55.0%
! ATCGCCATTGGTGGTAGGTG+TGG + chr1_3:27543376-27543395 Msa0112560:intron 55.0%
AAGAGGATGGGAGGTGGACA+TGG + chr1_3:27543688-27543707 Msa0112560:CDS 55.0%
! CACCCCCTTTTGCAACTCGG+TGG + chr1_3:27541340-27541359 Msa0112560:intron 60.0%
GGCCACCGAGTTGCAAAAGG+GGG - chr1_3:27542573-27542592 None:intergenic 60.0%
GGGCCACCGAGTTGCAAAAG+GGG - chr1_3:27542572-27542591 None:intergenic 60.0%
GGGGCCACCGAGTTGCAAAA+GGG - chr1_3:27542571-27542590 None:intergenic 60.0%
AGGGGCCACCGAGTTGCAAA+AGG - chr1_3:27542570-27542589 None:intergenic 60.0%
! GACTCGGTCAGGCCCTTAGA+TGG + chr1_3:27541376-27541395 Msa0112560:intron 60.0%
CTGGGAGTAGAGAGAGGAGG+AGG - chr1_3:27541544-27541563 None:intergenic 60.0%
CACCACCAGCACCAGCAGTT+CGG - chr1_3:27541604-27541623 None:intergenic 60.0%
AGGGGCCACCGAGTTGCAAA+AGG + chr1_3:27542570-27542589 Msa0112560:intron 60.0%
GGGGCCACCGAGTTGCAAAA+GGG + chr1_3:27542571-27542590 Msa0112560:intron 60.0%
GGGCCACCGAGTTGCAAAAG+GGG + chr1_3:27542572-27542591 Msa0112560:intron 60.0%
GGCCACCGAGTTGCAAAAGG+GGG + chr1_3:27542573-27542592 Msa0112560:intron 60.0%
! CACCCCCTTTTGCAACTCGG+TGG - chr1_3:27541340-27541359 None:intergenic 60.0%
GCTACGGGGCCAAACTTAGG+GGG + chr1_3:27542645-27542664 Msa0112560:intron 60.0%
TGGGCCACACCTACCACCAA+TGG - chr1_3:27543383-27543402 None:intergenic 60.0%
! TTGGTGGTAGGTGTGGCCCA+TGG + chr1_3:27543383-27543402 Msa0112560:intron 60.0%
TGGTGGTAGGTGTGGCCCAT+GGG + chr1_3:27543384-27543403 Msa0112560:intron 60.0%
ACTGGCGTGAAGAGGATGGG+AGG + chr1_3:27543679-27543698 Msa0112560:CDS 60.0%
CGTCTCCGAACTGCTGGTGC+TGG + chr1_3:27541596-27541615 Msa0112560:intron 65.0%
! CTCCGAACTGCTGGTGCTGG+TGG + chr1_3:27541599-27541618 Msa0112560:intron 65.0%
!! CGAACTGCTGGTGCTGGTGG+TGG + chr1_3:27541602-27541621 Msa0112560:intron 65.0%
TGGTAGGTGTGGCCCATGGG+AGG + chr1_3:27543387-27543406 Msa0112560:intron 65.0%
GGTAGGTGTGGCCCATGGGA+GGG + chr1_3:27543388-27543407 Msa0112560:intron 65.0%
GTAGGTGTGGCCCATGGGAG+GGG + chr1_3:27543389-27543408 Msa0112560:intron 65.0%
GGCGTGAAGAGGATGGGAGG+TGG + chr1_3:27543682-27543701 Msa0112560:CDS 65.0%
AGGGGGTGAAGTTGGGGGGC+TGG - chr1_3:27542590-27542609 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 27540216 27544217 27540216 ID=Msa0112560;Name=Msa0112560
chr1_3 mRNA 27540216 27544217 27540216 ID=Msa0112560-mRNA-1;Parent=Msa0112560;Name=Msa0112560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=115|1|1|1|0|1|2|341|96
chr1_3 exon 27540216 27540403 27540216 ID=Msa0112560-mRNA-1:exon:9165;Parent=Msa0112560-mRNA-1
chr1_3 exon 27543659 27544217 27543659 ID=Msa0112560-mRNA-1:exon:9166;Parent=Msa0112560-mRNA-1
chr1_3 five_prime_UTR 27540216 27540330 27540216 ID=Msa0112560-mRNA-1:five_prime_utr;Parent=Msa0112560-mRNA-1
chr1_3 CDS 27540331 27540403 27540331 ID=Msa0112560-mRNA-1:cds;Parent=Msa0112560-mRNA-1
chr1_3 CDS 27543659 27543876 27543659 ID=Msa0112560-mRNA-1:cds;Parent=Msa0112560-mRNA-1
chr1_3 three_prime_UTR 27543877 27544217 27543877 ID=Msa0112560-mRNA-1:three_prime_utr;Parent=Msa0112560-mRNA-1
Gene Sequence

>Msa0112560

ATGGCATTGAACAACGGTCTCAGATCTGCTGCGAAGCTAATTGCTTCTTCTGAATCCTCCATTTCCAAATCAGTGTGTAGAGGATTTCATTCAACTGGCGTGAAGAGGATGGGAGGTGGACATGGCCATAGCGAGCCAGAGTATATGCATGCATATCACATGTACAACTTGGACAAGATGAAGTATCAGGGTTTGAAAATGTCTCTTGCTGTGTTCACAGCTTTCAGCATTGGTGTTGCAGTTCCTGTGTACGCAGTCATTTTCCAGCAAAAGAAGACAGCATCTGGCTGA
Protein sequence

>Msa0112560

MALNNGLRSAAKLIASSESSISKSVCRGFHSTGVKRMGGGHGHSEPEYMHAYHMYNLDKMKYQGLKMSLAVFTAFSIGVAVPVYAVIFQQKKTASG*