Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1420990 | sp|Q39236|T2AG_ARATH | 90.566 | 106 | 10 | 0 | 1 | 106 | 1 | 106 | 6.55e-70 | 207 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1420990 | B7FH46 | 100.000 | 106 | 0 | 0 | 1 | 106 | 1 | 106 | 2.75e-73 | 222 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa1420990 | 0.801798 | 7.596290e-49 | -8.615850e-47 |
Msa0007440 | Msa1420990 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
Msa0010490 | Msa1420990 | 0.811198 | 7.894659e-51 | -8.615850e-47 |
Msa0010500 | Msa1420990 | 0.815174 | 1.058042e-51 | -8.615850e-47 |
Msa0011960 | Msa1420990 | 0.809829 | 1.559012e-50 | -8.615850e-47 |
Msa0013050 | Msa1420990 | -0.815274 | 1.005339e-51 | -8.615850e-47 |
Msa0020390 | Msa1420990 | 0.813473 | 2.514087e-51 | -8.615850e-47 |
Msa0023000 | Msa1420990 | 0.808681 | 2.748153e-50 | -8.615850e-47 |
Msa0025730 | Msa1420990 | 0.823031 | 1.723478e-53 | -8.615850e-47 |
Msa0027260 | Msa1420990 | 0.820937 | 5.268253e-53 | -8.615850e-47 |
Msa0028660 | Msa1420990 | 0.815776 | 7.771444e-52 | -8.615850e-47 |
Msa0032260 | Msa1420990 | 0.812748 | 3.626415e-51 | -8.615850e-47 |
Msa0032580 | Msa1420990 | 0.837615 | 4.682717e-57 | -8.615850e-47 |
Msa0033110 | Msa1420990 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
Msa0033260 | Msa1420990 | 0.811162 | 8.035929e-51 | -8.615850e-47 |
Msa0037540 | Msa1420990 | -0.829868 | 4.046751e-55 | -8.615850e-47 |
Msa0037590 | Msa1420990 | -0.828225 | 1.011802e-54 | -8.615850e-47 |
Msa0037840 | Msa1420990 | 0.817787 | 2.751391e-52 | -8.615850e-47 |
Msa0040690 | Msa1420990 | 0.814291 | 1.660683e-51 | -8.615850e-47 |
Msa0043980 | Msa1420990 | 0.816991 | 4.156886e-52 | -8.615850e-47 |
Msa0055180 | Msa1420990 | 0.806139 | 9.508306e-50 | -8.615850e-47 |
Msa0076320 | Msa1420990 | 0.816188 | 6.289537e-52 | -8.615850e-47 |
Msa0084940 | Msa1420990 | 0.802295 | 6.003024e-49 | -8.615850e-47 |
Msa0090520 | Msa1420990 | 0.839223 | 1.802256e-57 | -8.615850e-47 |
Msa0090550 | Msa1420990 | 0.813238 | 2.832563e-51 | -8.615850e-47 |
Msa0090570 | Msa1420990 | 0.806114 | 9.625101e-50 | -8.615850e-47 |
Msa0091410 | Msa1420990 | 0.811474 | 6.874586e-51 | -8.615850e-47 |
Msa0091570 | Msa1420990 | 0.809416 | 1.912418e-50 | -8.615850e-47 |
Msa0091610 | Msa1420990 | 0.807968 | 3.900098e-50 | -8.615850e-47 |
Msa0100740 | Msa1420990 | 0.831088 | 2.035126e-55 | -8.615850e-47 |
Msa0112560 | Msa1420990 | 0.807431 | 5.070744e-50 | -8.615850e-47 |
Msa0115270 | Msa1420990 | 0.817598 | 3.034666e-52 | -8.615850e-47 |
Msa0115390 | Msa1420990 | 0.813798 | 2.132687e-51 | -8.615850e-47 |
Msa1361520 | Msa1420990 | 0.803993 | 2.673430e-49 | -8.615850e-47 |
Msa1362420 | Msa1420990 | 0.804654 | 1.946891e-49 | -8.615850e-47 |
Msa1364210 | Msa1420990 | 0.813813 | 2.116399e-51 | -8.615850e-47 |
Msa1366650 | Msa1420990 | 0.804631 | 1.969407e-49 | -8.615850e-47 |
Msa1368120 | Msa1420990 | 0.804750 | 1.859343e-49 | -8.615850e-47 |
Msa1370070 | Msa1420990 | -0.819558 | 1.090686e-52 | -8.615850e-47 |
Msa1375380 | Msa1420990 | 0.815112 | 1.092460e-51 | -8.615850e-47 |
Msa1376650 | Msa1420990 | 0.801891 | 7.268800e-49 | -8.615850e-47 |
Msa1385770 | Msa1420990 | 0.832471 | 9.277553e-56 | -8.615850e-47 |
Msa1386780 | Msa1420990 | 0.835514 | 1.605686e-56 | -8.615850e-47 |
Msa1387420 | Msa1420990 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
Msa1389510 | Msa1420990 | 0.807420 | 5.098693e-50 | -8.615850e-47 |
Msa1391410 | Msa1420990 | 0.802425 | 5.644235e-49 | -8.615850e-47 |
Msa1393740 | Msa1420990 | 0.814234 | 1.709254e-51 | -8.615850e-47 |
Msa1394290 | Msa1420990 | 0.801927 | 7.147106e-49 | -8.615850e-47 |
Msa1394500 | Msa1420990 | 0.817682 | 2.905881e-52 | -8.615850e-47 |
Msa1403340 | Msa1420990 | 0.811160 | 8.046041e-51 | -8.615850e-47 |
Msa1409240 | Msa1420990 | 0.830541 | 2.770679e-55 | -8.615850e-47 |
Msa1419870 | Msa1420990 | 0.808988 | 2.362718e-50 | -8.615850e-47 |
Msa1420990 | Msa1424750 | 0.811175 | 7.985414e-51 | -8.615850e-47 |
Msa1420990 | Msa1433390 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
Msa1420990 | Msa1434140 | 0.823753 | 1.168960e-53 | -8.615850e-47 |
Msa1420990 | Msa1436520 | 0.828662 | 7.936018e-55 | -8.615850e-47 |
Msa1420990 | Msa1440000 | 0.824083 | 9.782106e-54 | -8.615850e-47 |
Msa1420990 | Msa1444310 | 0.819882 | 9.194727e-53 | -8.615850e-47 |
Msa1420990 | Msa1451550 | 0.807553 | 4.777310e-50 | -8.615850e-47 |
Msa1420990 | Msa1454570 | 0.803450 | 3.465400e-49 | -8.615850e-47 |
Msa1420990 | Msa1457920 | 0.818724 | 1.688566e-52 | -8.615850e-47 |
Msa1420990 | Msa1460320 | -0.801259 | 9.797082e-49 | -8.615850e-47 |
Msa1420990 | Msa1461280 | 0.812050 | 5.152856e-51 | -8.615850e-47 |
Msa1420990 | Msa1465960 | 0.822147 | 2.768042e-53 | -8.615850e-47 |
Msa0603570 | Msa1420990 | 0.822574 | 2.202519e-53 | -8.615850e-47 |
Msa0610390 | Msa1420990 | 0.818102 | 2.335655e-52 | -8.615850e-47 |
Msa0610430 | Msa1420990 | 0.819146 | 1.353440e-52 | -8.615850e-47 |
Msa0613970 | Msa1420990 | 0.800666 | 1.294933e-48 | -8.615850e-47 |
Msa0620890 | Msa1420990 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
Msa0621490 | Msa1420990 | 0.812107 | 5.007719e-51 | -8.615850e-47 |
Msa0623790 | Msa1420990 | 0.804366 | 2.235999e-49 | -8.615850e-47 |
Msa0631350 | Msa1420990 | 0.842150 | 3.083291e-58 | -8.615850e-47 |
Msa0632870 | Msa1420990 | 0.816411 | 5.606241e-52 | -8.615850e-47 |
Msa0636070 | Msa1420990 | 0.804919 | 1.713991e-49 | -8.615850e-47 |
Msa0641670 | Msa1420990 | 0.815587 | 8.564231e-52 | -8.615850e-47 |
Msa0642970 | Msa1420990 | 0.832724 | 8.028666e-56 | -8.615850e-47 |
Msa0643560 | Msa1420990 | 0.820977 | 5.157856e-53 | -8.615850e-47 |
Msa0649220 | Msa1420990 | 0.800804 | 1.213635e-48 | -8.615850e-47 |
Msa0649350 | Msa1420990 | 0.806405 | 8.356822e-50 | -8.615850e-47 |
Msa0650050 | Msa1420990 | -0.801700 | 7.957266e-49 | -8.615850e-47 |
Msa0650190 | Msa1420990 | 0.802683 | 4.993089e-49 | -8.615850e-47 |
Msa0650920 | Msa1420990 | 0.825083 | 5.687435e-54 | -8.615850e-47 |
Msa0661190 | Msa1420990 | -0.808119 | 3.621628e-50 | -8.615850e-47 |
Msa0661300 | Msa1420990 | 0.805635 | 1.213605e-49 | -8.615850e-47 |
Msa0662630 | Msa1420990 | 0.807732 | 4.378369e-50 | -8.615850e-47 |
Msa0669720 | Msa1420990 | 0.800858 | 1.183131e-48 | -8.615850e-47 |
Msa0675410 | Msa1420990 | 0.823751 | 1.170152e-53 | -8.615850e-47 |
Msa0682680 | Msa1420990 | 0.827565 | 1.458260e-54 | -8.615850e-47 |
Msa0682840 | Msa1420990 | 0.803779 | 2.961832e-49 | -8.615850e-47 |
Msa0683170 | Msa1420990 | 0.803670 | 3.120827e-49 | -8.615850e-47 |
Msa0688390 | Msa1420990 | 0.808413 | 3.135851e-50 | -8.615850e-47 |
Msa0688960 | Msa1420990 | 0.827910 | 1.205006e-54 | -8.615850e-47 |
Msa0691900 | Msa1420990 | 0.802525 | 5.383927e-49 | -8.615850e-47 |
Msa0692830 | Msa1420990 | 0.813755 | 2.179290e-51 | -8.615850e-47 |
Msa0692840 | Msa1420990 | 0.807322 | 5.349191e-50 | -8.615850e-47 |
Msa0692940 | Msa1420990 | 0.836836 | 7.408378e-57 | -8.615850e-47 |
Msa0692950 | Msa1420990 | 0.801711 | 7.915731e-49 | -8.615850e-47 |
Msa0694840 | Msa1420990 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
Msa0697940 | Msa1420990 | 0.803767 | 2.979721e-49 | -8.615850e-47 |
Msa0698540 | Msa1420990 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
Msa0706960 | Msa1420990 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
Msa0709500 | Msa1420990 | 0.801511 | 8.697126e-49 | -8.615850e-47 |
Msa0711780 | Msa1420990 | 0.811018 | 8.632868e-51 | -8.615850e-47 |
Msa0711890 | Msa1420990 | 0.805087 | 1.580835e-49 | -8.615850e-47 |
Msa0716840 | Msa1420990 | 0.808576 | 2.894465e-50 | -8.615850e-47 |
Msa0718740 | Msa1420990 | 0.807449 | 5.026374e-50 | -8.615850e-47 |
Msa0722020 | Msa1420990 | 0.826072 | 3.315720e-54 | -8.615850e-47 |
Msa0737600 | Msa1420990 | 0.815930 | 7.180888e-52 | -8.615850e-47 |
Msa0750170 | Msa1420990 | 0.826515 | 2.600747e-54 | -8.615850e-47 |
Msa0763020 | Msa1420990 | 0.806099 | 9.694664e-50 | -8.615850e-47 |
Msa0763070 | Msa1420990 | 0.806818 | 6.836959e-50 | -8.615850e-47 |
Msa0770200 | Msa1420990 | 0.807609 | 4.649086e-50 | -8.615850e-47 |
Msa0772480 | Msa1420990 | 0.807074 | 6.036517e-50 | -8.615850e-47 |
Msa0774540 | Msa1420990 | 0.811190 | 7.922643e-51 | -8.615850e-47 |
Msa0784860 | Msa1420990 | 0.823043 | 1.712653e-53 | -8.615850e-47 |
Msa0790850 | Msa1420990 | 0.802524 | 5.385517e-49 | -8.615850e-47 |
Msa0793390 | Msa1420990 | 0.811611 | 6.421818e-51 | -8.615850e-47 |
Msa0794670 | Msa1420990 | 0.825018 | 5.891057e-54 | -8.615850e-47 |
Msa0798440 | Msa1420990 | 0.818827 | 1.600033e-52 | -8.615850e-47 |
Msa0800370 | Msa1420990 | 0.838395 | 2.949552e-57 | -8.615850e-47 |
Msa0805500 | Msa1420990 | 0.804439 | 2.158778e-49 | -8.615850e-47 |
Msa0808080 | Msa1420990 | 0.806820 | 6.830201e-50 | -8.615850e-47 |
Msa0808270 | Msa1420990 | 0.825740 | 3.974496e-54 | -8.615850e-47 |
Msa0830540 | Msa1420990 | 0.818877 | 1.557971e-52 | -8.615850e-47 |
Msa0831870 | Msa1420990 | 0.808663 | 2.772354e-50 | -8.615850e-47 |
Msa0121820 | Msa1420990 | 0.813830 | 2.098894e-51 | -8.615850e-47 |
Msa0126880 | Msa1420990 | 0.810599 | 1.063906e-50 | -8.615850e-47 |
Msa0127310 | Msa1420990 | 0.824431 | 8.100707e-54 | -8.615850e-47 |
Msa0129190 | Msa1420990 | -0.843914 | 1.044987e-58 | -8.615850e-47 |
Msa0135380 | Msa1420990 | 0.804107 | 2.531278e-49 | -8.615850e-47 |
Msa0137990 | Msa1420990 | 0.842724 | 2.171314e-58 | -8.615850e-47 |
Msa0140110 | Msa1420990 | 0.838130 | 3.453226e-57 | -8.615850e-47 |
Msa0140650 | Msa1420990 | 0.811707 | 6.119713e-51 | -8.615850e-47 |
Msa0142980 | Msa1420990 | 0.822804 | 1.946701e-53 | -8.615850e-47 |
Msa0150820 | Msa1420990 | 0.804493 | 2.103606e-49 | -8.615850e-47 |
Msa0159170 | Msa1420990 | 0.803724 | 3.040557e-49 | -8.615850e-47 |
Msa0160550 | Msa1420990 | 0.823339 | 1.460567e-53 | -8.615850e-47 |
Msa0162770 | Msa1420990 | -0.810429 | 1.157787e-50 | -8.615850e-47 |
Msa0167980 | Msa1420990 | 0.804696 | 1.908387e-49 | -8.615850e-47 |
Msa0171540 | Msa1420990 | 0.800497 | 1.402016e-48 | -8.615850e-47 |
Msa0172970 | Msa1420990 | 0.832518 | 9.030910e-56 | -8.615850e-47 |
Msa0183460 | Msa1420990 | 0.804537 | 2.059578e-49 | -8.615850e-47 |
Msa0183850 | Msa1420990 | 0.806685 | 7.296602e-50 | -8.615850e-47 |
Msa0183870 | Msa1420990 | 0.813185 | 2.909317e-51 | -8.615850e-47 |
Msa0183900 | Msa1420990 | 0.842155 | 3.073840e-58 | -8.615850e-47 |
Msa0184780 | Msa1420990 | 0.806363 | 8.532022e-50 | -8.615850e-47 |
Msa0189300 | Msa1420990 | 0.811332 | 7.382359e-51 | -8.615850e-47 |
Msa0189520 | Msa1420990 | 0.818976 | 1.479734e-52 | -8.615850e-47 |
Msa0190120 | Msa1420990 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
Msa0191050 | Msa1420990 | 0.808467 | 3.053517e-50 | -8.615850e-47 |
Msa0194480 | Msa1420990 | 0.822048 | 2.918269e-53 | -8.615850e-47 |
Msa0199690 | Msa1420990 | 0.817366 | 3.423407e-52 | -8.615850e-47 |
Msa0207670 | Msa1420990 | 0.824779 | 6.707639e-54 | -8.615850e-47 |
Msa0207700 | Msa1420990 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
Msa0209350 | Msa1420990 | 0.835218 | 1.907384e-56 | -8.615850e-47 |
Msa0209500 | Msa1420990 | 0.808404 | 3.149460e-50 | -8.615850e-47 |
Msa0220720 | Msa1420990 | 0.807583 | 4.709206e-50 | -8.615850e-47 |
Msa0228070 | Msa1420990 | 0.816903 | 4.349735e-52 | -8.615850e-47 |
Msa0229380 | Msa1420990 | 0.826255 | 2.999146e-54 | -8.615850e-47 |
Msa0231880 | Msa1420990 | 0.815750 | 7.876731e-52 | -8.615850e-47 |
Msa0233350 | Msa1420990 | 0.813375 | 2.642580e-51 | -8.615850e-47 |
Msa0236270 | Msa1420990 | 0.848489 | 5.934667e-60 | -8.615850e-47 |
Msa1224810 | Msa1420990 | 0.820760 | 5.783943e-53 | -8.615850e-47 |
Msa1237940 | Msa1420990 | 0.818740 | 1.674361e-52 | -8.615850e-47 |
Msa1243740 | Msa1420990 | -0.808676 | 2.755230e-50 | -8.615850e-47 |
Msa1253020 | Msa1420990 | 0.819894 | 9.136393e-53 | -8.615850e-47 |
Msa1253800 | Msa1420990 | 0.811039 | 8.546516e-51 | -8.615850e-47 |
Msa1254370 | Msa1420990 | -0.805637 | 1.212646e-49 | -8.615850e-47 |
Msa1254730 | Msa1420990 | 0.841542 | 4.460385e-58 | -8.615850e-47 |
Msa1269300 | Msa1420990 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
Msa1275360 | Msa1420990 | 0.808756 | 2.648867e-50 | -8.615850e-47 |
Msa1287460 | Msa1420990 | 0.810891 | 9.199924e-51 | -8.615850e-47 |
Msa1294610 | Msa1420990 | -0.823675 | 1.219233e-53 | -8.615850e-47 |
Msa1294820 | Msa1420990 | 0.832861 | 7.423374e-56 | -8.615850e-47 |
Msa1296830 | Msa1420990 | 0.832907 | 7.232388e-56 | -8.615850e-47 |
Msa1298510 | Msa1420990 | 0.818003 | 2.458708e-52 | -8.615850e-47 |
Msa1302190 | Msa1420990 | -0.817799 | 2.733457e-52 | -8.615850e-47 |
Msa1304820 | Msa1420990 | 0.806974 | 6.337171e-50 | -8.615850e-47 |
Msa1306430 | Msa1420990 | 0.804328 | 2.277777e-49 | -8.615850e-47 |
Msa1306560 | Msa1420990 | 0.838292 | 3.136025e-57 | -8.615850e-47 |
Msa1320390 | Msa1420990 | 0.805927 | 1.054100e-49 | -8.615850e-47 |
Msa1332040 | Msa1420990 | -0.821299 | 4.346041e-53 | -8.615850e-47 |
Msa1335940 | Msa1420990 | 0.817133 | 3.861581e-52 | -8.615850e-47 |
Msa1336560 | Msa1420990 | 0.837291 | 5.669306e-57 | -8.615850e-47 |
Msa1336710 | Msa1420990 | 0.808938 | 2.421082e-50 | -8.615850e-47 |
Msa0366890 | Msa1420990 | 0.821191 | 4.603302e-53 | -8.615850e-47 |
Msa0369050 | Msa1420990 | 0.845588 | 3.698157e-59 | -8.615850e-47 |
Msa0369220 | Msa1420990 | 0.838248 | 3.219123e-57 | -8.615850e-47 |
Msa0372340 | Msa1420990 | 0.837911 | 3.929685e-57 | -8.615850e-47 |
Msa0376300 | Msa1420990 | 0.820042 | 8.450681e-53 | -8.615850e-47 |
Msa0376310 | Msa1420990 | 0.817551 | 3.109373e-52 | -8.615850e-47 |
Msa0376690 | Msa1420990 | 0.828264 | 9.901092e-55 | -8.615850e-47 |
Msa0383800 | Msa1420990 | 0.817478 | 3.230441e-52 | -8.615850e-47 |
Msa0385490 | Msa1420990 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
Msa0385580 | Msa1420990 | 0.838664 | 2.513726e-57 | -8.615850e-47 |
Msa0388700 | Msa1420990 | 0.804707 | 1.898130e-49 | -8.615850e-47 |
Msa0397540 | Msa1420990 | 0.808110 | 3.638396e-50 | -8.615850e-47 |
Msa0402790 | Msa1420990 | 0.840303 | 9.429091e-58 | -8.615850e-47 |
Msa0408390 | Msa1420990 | 0.807059 | 6.081921e-50 | -8.615850e-47 |
Msa0414800 | Msa1420990 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
Msa0415430 | Msa1420990 | 0.838191 | 3.329168e-57 | -8.615850e-47 |
Msa0419520 | Msa1420990 | 0.803896 | 2.800468e-49 | -8.615850e-47 |
Msa0423450 | Msa1420990 | -0.808589 | 2.875549e-50 | -8.615850e-47 |
Msa0429290 | Msa1420990 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
Msa0434180 | Msa1420990 | 0.807829 | 4.174658e-50 | -8.615850e-47 |
Msa0437690 | Msa1420990 | -0.800467 | 1.421897e-48 | -8.615850e-47 |
Msa0442190 | Msa1420990 | 0.821795 | 3.338414e-53 | -8.615850e-47 |
Msa0442200 | Msa1420990 | 0.817491 | 3.208448e-52 | -8.615850e-47 |
Msa0453350 | Msa1420990 | 0.815555 | 8.706327e-52 | -8.615850e-47 |
Msa0458060 | Msa1420990 | 0.824750 | 6.813951e-54 | -8.615850e-47 |
Msa0465550 | Msa1420990 | 0.841659 | 4.156511e-58 | -8.615850e-47 |
Msa0466250 | Msa1420990 | 0.819307 | 1.244068e-52 | -8.615850e-47 |
Msa0467380 | Msa1420990 | 0.800529 | 1.380858e-48 | -8.615850e-47 |
Msa0469620 | Msa1420990 | -0.807396 | 5.158623e-50 | -8.615850e-47 |
Msa0471440 | Msa1420990 | 0.809894 | 1.510085e-50 | -8.615850e-47 |
Msa0471590 | Msa1420990 | 0.845490 | 3.931970e-59 | -8.615850e-47 |
Msa0475580 | Msa1420990 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
Msa0481480 | Msa1420990 | 0.803516 | 3.358747e-49 | -8.615850e-47 |
Msa0481810 | Msa1420990 | 0.855922 | 4.557104e-62 | -8.615850e-47 |
Msa1012830 | Msa1420990 | 0.847279 | 1.278439e-59 | -8.615850e-47 |
Msa1013040 | Msa1420990 | 0.804538 | 2.058625e-49 | -8.615850e-47 |
Msa1019260 | Msa1420990 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
Msa1034150 | Msa1420990 | 0.822749 | 2.005359e-53 | -8.615850e-47 |
Msa1034270 | Msa1420990 | 0.802217 | 6.229418e-49 | -8.615850e-47 |
Msa1037420 | Msa1420990 | 0.837834 | 4.114681e-57 | -8.615850e-47 |
Msa1046020 | Msa1420990 | 0.946962 | 1.690985e-105 | -8.615850e-47 |
Msa1046060 | Msa1420990 | 0.946477 | 4.285526e-105 | -8.615850e-47 |
Msa1048160 | Msa1420990 | 0.825145 | 5.499883e-54 | -8.615850e-47 |
Msa1063510 | Msa1420990 | 0.825184 | 5.384149e-54 | -8.615850e-47 |
Msa1064250 | Msa1420990 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
Msa1077030 | Msa1420990 | 0.837251 | 5.804657e-57 | -8.615850e-47 |
Msa1081930 | Msa1420990 | 0.814772 | 1.299673e-51 | -8.615850e-47 |
Msa1084470 | Msa1420990 | 0.822287 | 2.567836e-53 | -8.615850e-47 |
Msa1089320 | Msa1420990 | 0.813944 | 1.980295e-51 | -8.615850e-47 |
Msa1091100 | Msa1420990 | 0.961180 | 2.102722e-119 | -8.615850e-47 |
Msa1091940 | Msa1420990 | 0.826342 | 2.859972e-54 | -8.615850e-47 |
Msa1104210 | Msa1420990 | 0.815297 | 9.937415e-52 | -8.615850e-47 |
Msa0242410 | Msa1420990 | 0.807009 | 6.231237e-50 | -8.615850e-47 |
Msa0255080 | Msa1420990 | 0.802758 | 4.818120e-49 | -8.615850e-47 |
Msa0257490 | Msa1420990 | 0.803736 | 3.023090e-49 | -8.615850e-47 |
Msa0260200 | Msa1420990 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
Msa0260680 | Msa1420990 | 0.814441 | 1.538643e-51 | -8.615850e-47 |
Msa0261550 | Msa1420990 | 0.807619 | 4.627179e-50 | -8.615850e-47 |
Msa0262310 | Msa1420990 | 0.836817 | 7.490205e-57 | -8.615850e-47 |
Msa0269470 | Msa1420990 | 0.806044 | 9.959720e-50 | -8.615850e-47 |
Msa0271360 | Msa1420990 | 0.804311 | 2.295932e-49 | -8.615850e-47 |
Msa0271890 | Msa1420990 | 0.819002 | 1.459544e-52 | -8.615850e-47 |
Msa0280430 | Msa1420990 | 0.820802 | 5.658067e-53 | -8.615850e-47 |
Msa0281530 | Msa1420990 | 0.800758 | 1.240345e-48 | -8.615850e-47 |
Msa0291500 | Msa1420990 | 0.801875 | 7.323103e-49 | -8.615850e-47 |
Msa0296920 | Msa1420990 | 0.804507 | 2.089690e-49 | -8.615850e-47 |
Msa0298700 | Msa1420990 | 0.849493 | 3.122052e-60 | -8.615850e-47 |
Msa0299870 | Msa1420990 | 0.820198 | 7.785462e-53 | -8.615850e-47 |
Msa0300120 | Msa1420990 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
Msa0304590 | Msa1420990 | 0.814658 | 1.377027e-51 | -8.615850e-47 |
Msa0304660 | Msa1420990 | 0.814186 | 1.751360e-51 | -8.615850e-47 |
Msa0310860 | Msa1420990 | 0.822131 | 2.791621e-53 | -8.615850e-47 |
Msa0326480 | Msa1420990 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
Msa0331700 | Msa1420990 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
Msa0335060 | Msa1420990 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
Msa0337240 | Msa1420990 | 0.807009 | 6.229969e-50 | -8.615850e-47 |
Msa0337620 | Msa1420990 | 0.823036 | 1.719057e-53 | -8.615850e-47 |
Msa0337650 | Msa1420990 | 0.834992 | 2.174304e-56 | -8.615850e-47 |
Msa0347680 | Msa1420990 | 0.839282 | 1.739130e-57 | -8.615850e-47 |
Msa0358860 | Msa1420990 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
Msa0359560 | Msa1420990 | 0.803426 | 3.505198e-49 | -8.615850e-47 |
Msa1109680 | Msa1420990 | 0.814403 | 1.568650e-51 | -8.615850e-47 |
Msa1123810 | Msa1420990 | 0.818666 | 1.740224e-52 | -8.615850e-47 |
Msa1126830 | Msa1420990 | 0.815099 | 1.099517e-51 | -8.615850e-47 |
Msa1127830 | Msa1420990 | 0.808675 | 2.756937e-50 | -8.615850e-47 |
Msa1128060 | Msa1420990 | 0.801884 | 7.294825e-49 | -8.615850e-47 |
Msa1129550 | Msa1420990 | 0.811811 | 5.809277e-51 | -8.615850e-47 |
Msa1129730 | Msa1420990 | 0.816563 | 5.185845e-52 | -8.615850e-47 |
Msa1131560 | Msa1420990 | 0.817252 | 3.632172e-52 | -8.615850e-47 |
Msa1133230 | Msa1420990 | 0.826679 | 2.377080e-54 | -8.615850e-47 |
Msa1133250 | Msa1420990 | 0.825354 | 4.908082e-54 | -8.615850e-47 |
Msa1134090 | Msa1420990 | 0.964248 | 4.348861e-123 | -8.615850e-47 |
Msa1135470 | Msa1420990 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
Msa1138870 | Msa1420990 | 0.807715 | 4.414233e-50 | -8.615850e-47 |
Msa1143930 | Msa1420990 | -0.814687 | 1.356837e-51 | -8.615850e-47 |
Msa1165780 | Msa1420990 | 0.819864 | 9.285386e-53 | -8.615850e-47 |
Msa1165940 | Msa1420990 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
Msa1166870 | Msa1420990 | 0.805378 | 1.373842e-49 | -8.615850e-47 |
Msa1171870 | Msa1420990 | 0.804617 | 1.982219e-49 | -8.615850e-47 |
Msa1174040 | Msa1420990 | 0.806219 | 9.149478e-50 | -8.615850e-47 |
Msa1181250 | Msa1420990 | 0.803614 | 3.205059e-49 | -8.615850e-47 |
Msa1201430 | Msa1420990 | -0.803042 | 4.209468e-49 | -8.615850e-47 |
Msa1206670 | Msa1420990 | 0.806928 | 6.482637e-50 | -8.615850e-47 |
Msa1207270 | Msa1420990 | 0.807767 | 4.304488e-50 | -8.615850e-47 |
Msa1210020 | Msa1420990 | 0.827817 | 1.268810e-54 | -8.615850e-47 |
Msa1217430 | Msa1420990 | -0.817221 | 3.689484e-52 | -8.615850e-47 |
Msa1217470 | Msa1420990 | 0.807284 | 5.448741e-50 | -8.615850e-47 |
Msa1218600 | Msa1420990 | 0.801945 | 7.084950e-49 | -8.615850e-47 |
Msa0484740 | Msa1420990 | 0.803550 | 3.304656e-49 | -8.615850e-47 |
Msa0485850 | Msa1420990 | 0.843791 | 1.127629e-58 | -8.615850e-47 |
Msa0493410 | Msa1420990 | 0.800916 | 1.151216e-48 | -8.615850e-47 |
Msa0498650 | Msa1420990 | 0.812937 | 3.297018e-51 | -8.615850e-47 |
Msa0508590 | Msa1420990 | 0.840926 | 6.479783e-58 | -8.615850e-47 |
Msa0508630 | Msa1420990 | 0.831007 | 2.130007e-55 | -8.615850e-47 |
Msa0508870 | Msa1420990 | 0.830414 | 2.976465e-55 | -8.615850e-47 |
Msa0509390 | Msa1420990 | 0.811606 | 6.437112e-51 | -8.615850e-47 |
Msa0509950 | Msa1420990 | -0.801661 | 8.105391e-49 | -8.615850e-47 |
Msa0512750 | Msa1420990 | 0.819976 | 8.752018e-53 | -8.615850e-47 |
Msa0524500 | Msa1420990 | 0.805236 | 1.471296e-49 | -8.615850e-47 |
Msa0534900 | Msa1420990 | 0.849573 | 2.965259e-60 | -8.615850e-47 |
Msa0541360 | Msa1420990 | 0.818059 | 2.388102e-52 | -8.615850e-47 |
Msa0541410 | Msa1420990 | 0.807913 | 4.006194e-50 | -8.615850e-47 |
Msa0547160 | Msa1420990 | 0.815223 | 1.032257e-51 | -8.615850e-47 |
Msa0555450 | Msa1420990 | 0.844322 | 8.121216e-59 | -8.615850e-47 |
Msa0556060 | Msa1420990 | 0.806998 | 6.263730e-50 | -8.615850e-47 |
Msa0556790 | Msa1420990 | 0.812699 | 3.718196e-51 | -8.615850e-47 |
Msa0557480 | Msa1420990 | 0.800148 | 1.651391e-48 | -8.615850e-47 |
Msa0581110 | Msa1420990 | 0.814293 | 1.658556e-51 | -8.615850e-47 |
Msa0588260 | Msa1420990 | 0.837156 | 6.137716e-57 | -8.615850e-47 |
Msa0589190 | Msa1420990 | 0.836259 | 1.039303e-56 | -8.615850e-47 |
Msa0598720 | Msa1420990 | 0.807847 | 4.139216e-50 | -8.615850e-47 |
Msa0847080 | Msa1420990 | 0.812037 | 5.187009e-51 | -8.615850e-47 |
Msa0849030 | Msa1420990 | 0.814165 | 1.769756e-51 | -8.615850e-47 |
Msa0852390 | Msa1420990 | 0.802491 | 5.471430e-49 | -8.615850e-47 |
Msa0861470 | Msa1420990 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
Msa0861570 | Msa1420990 | 0.801603 | 8.330223e-49 | -8.615850e-47 |
Msa0865030 | Msa1420990 | 0.804649 | 1.951610e-49 | -8.615850e-47 |
Msa0876200 | Msa1420990 | 0.809840 | 1.550835e-50 | -8.615850e-47 |
Msa0902760 | Msa1420990 | 0.802054 | 6.730902e-49 | -8.615850e-47 |
Msa0932830 | Msa1420990 | 0.804943 | 1.694923e-49 | -8.615850e-47 |
Msa0942070 | Msa1420990 | 0.806419 | 8.302111e-50 | -8.615850e-47 |
Msa0944200 | Msa1420990 | 0.801928 | 7.144298e-49 | -8.615850e-47 |
Msa0947660 | Msa1420990 | 0.806699 | 7.246418e-50 | -8.615850e-47 |
Msa0947760 | Msa1420990 | 0.814332 | 1.626344e-51 | -8.615850e-47 |
Msa0969810 | Msa1420990 | 0.846683 | 1.861449e-59 | -8.615850e-47 |
Msa0970420 | Msa1420990 | 0.814890 | 1.223680e-51 | -8.615850e-47 |
Msa0971020 | Msa1420990 | 0.853210 | 2.777668e-61 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1420990 | MtrunA17_Chr7g0214171 | 100.000 | 106 | 0 | 0 | 1 | 106 | 1 | 106 | 5.29e-77 | 222 |
Msa1420990 | MtrunA17_Chr5g0427821 | 86.792 | 106 | 14 | 0 | 1 | 106 | 7 | 112 | 8.65e-68 | 199 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1420990 | AT4G24440.2 | 90.566 | 106 | 10 | 0 | 1 | 106 | 1 | 106 | 6.66e-71 | 207 |
Msa1420990 | AT4G24440.1 | 90.566 | 106 | 10 | 0 | 1 | 106 | 1 | 106 | 6.66e-71 | 207 |
Find 41 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTCCTGAGATTGCGATTC+AGG | 0.222867 | tig0024902:-18874 | Msa1420990:CDS |
TTAATCTTGGCGATCGATTT+AGG | 0.231845 | tig0024902:-19363 | Msa1420990:intron |
TTTCTCTGGGCAAACATCTA+TGG | 0.280270 | tig0024902:-15623 | Msa1420990:three_prime_UTR |
TATGTTATTATAGATTTAAA+AGG | 0.331823 | tig0024902:-15813 | Msa1420990:three_prime_UTR |
CTCTCTCGATTAGTTAATCT+TGG | 0.355497 | tig0024902:-19376 | Msa1420990:five_prime_UTR |
ATGTGGCCTTCAGTTCTTGC+AGG | 0.384806 | tig0024902:-15851 | Msa1420990:three_prime_UTR |
TAGTCATCGTTATAAATGTA+TGG | 0.419101 | tig0024902:-15591 | Msa1420990:three_prime_UTR |
TCGTTATAAATGTATGGTTA+TGG | 0.429200 | tig0024902:-15585 | Msa1420990:three_prime_UTR |
AATGTGCCTCACTGAGACTT+TGG | 0.433161 | tig0024902:-18922 | Msa1420990:CDS |
TGAGAATATCACTTGGGAAC+TGG | 0.438530 | tig0024902:-15749 | Msa1420990:three_prime_UTR |
AATAATAACATGAAGATTGA+AGG | 0.444739 | tig0024902:+15790 | None:intergenic |
GTAGTCTATGACTGAAGCTC+TGG | 0.460011 | tig0024902:-18735 | Msa1420990:intron |
GGTTCTCGTTCAGTTTGATA+AGG | 0.472558 | tig0024902:-18853 | Msa1420990:intron |
GAAGGCCACATCCGTCACTA+TGG | 0.482621 | tig0024902:+15863 | None:intergenic |
CAAAGCATCTTGTAAGATGA+AGG | 0.489651 | tig0024902:+16034 | None:intergenic |
CTTATCATCTGCTGGTACCA+TGG | 0.489942 | tig0024902:-15899 | Msa1420990:three_prime_UTR |
TAACCCGTCCAACATTCTCT+TGG | 0.494051 | tig0024902:+15994 | None:intergenic |
CACTGAGACTTTGGACGAGA+TGG | 0.495885 | tig0024902:-18913 | Msa1420990:CDS |
AGAACCTGAATCGCAATCTC+AGG | 0.497392 | tig0024902:+18870 | None:intergenic |
ATTTGTTTACATAGAGCTCA+TGG | 0.502581 | tig0024902:+15651 | None:intergenic |
TAAAAGCAAGGTCTCTATCA+AGG | 0.505886 | tig0024902:-18702 | Msa1420990:intron |
ACAAGGAGCTTATCATCTGC+TGG | 0.531966 | tig0024902:-15907 | Msa1420990:three_prime_UTR |
TGTTGGACGGGTTAAAATAG+TGG | 0.534469 | tig0024902:-15985 | Msa1420990:CDS |
CTGGTTCCTGCAAGAACTGA+AGG | 0.534775 | tig0024902:+15845 | None:intergenic |
CATCTGCTGGTACCATGGAT+TGG | 0.547292 | tig0024902:-15894 | Msa1420990:three_prime_UTR |
CTGCTGGTACCATGGATTGG+TGG | 0.547361 | tig0024902:-15891 | Msa1420990:three_prime_UTR |
CTTTATCGTAGGTCGACAAT+CGG | 0.550857 | tig0024902:-18945 | Msa1420990:CDS |
GAAGACAACCAAGAGAATGT+TGG | 0.561206 | tig0024902:-16002 | Msa1420990:CDS |
TAATAACATAGTGTAGATGC+TGG | 0.566171 | tig0024902:+15826 | None:intergenic |
TTGGACGAGATGGTTCAGAA+TGG | 0.589806 | tig0024902:-18903 | Msa1420990:CDS |
CAACCAAGAGAATGTTGGAC+GGG | 0.592439 | tig0024902:-15997 | Msa1420990:CDS |
TTAGACCATAGTGACGGATG+TGG | 0.610434 | tig0024902:-15868 | Msa1420990:three_prime_UTR |
ATGGTCTAACCACCAATCCA+TGG | 0.610777 | tig0024902:+15882 | None:intergenic |
GGAAACACAAGTTAAAAGCA+AGG | 0.611187 | tig0024902:-18714 | Msa1420990:CDS |
TTTCTATCGTATTGTCAACA+AGG | 0.636647 | tig0024902:-15924 | Msa1420990:three_prime_UTR |
GTTACATTGAGAATATCACT+TGG | 0.644377 | tig0024902:-15756 | Msa1420990:three_prime_UTR |
ACAACCAAGAGAATGTTGGA+CGG | 0.645466 | tig0024902:-15998 | Msa1420990:CDS |
CGACGTTCGAACTTTATCGT+AGG | 0.648273 | tig0024902:-18956 | Msa1420990:CDS |
TTACATTGAGAATATCACTT+GGG | 0.661466 | tig0024902:-15755 | Msa1420990:three_prime_UTR |
TGGTGGTTAGACCATAGTGA+CGG | 0.696323 | tig0024902:-15874 | Msa1420990:three_prime_UTR |
TCTCGTCCAAAGTCTCAGTG+AGG | 0.751939 | tig0024902:+18916 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATTGAATAAATTCTT+TGG | - | tig0024902:17497-17516 | Msa1420990:intron | 10.0% |
!! | ATTTATTGAATAAATTCTTT+GGG | - | tig0024902:17498-17517 | Msa1420990:intron | 10.0% |
!! | TATGTTATTATAGATTTAAA+AGG | - | tig0024902:19224-19243 | Msa1420990:intron | 10.0% |
!!! | TACAGTTTTTTTTTTTTTTT+TGG | + | tig0024902:19351-19370 | None:intergenic | 10.0% |
!! | TTTGATGTGTAATTAAAATT+TGG | + | tig0024902:17021-17040 | None:intergenic | 15.0% |
!! | TTTATTGAATAAATTCTTTG+GGG | - | tig0024902:17499-17518 | Msa1420990:intron | 15.0% |
!!! | TACCTTTTTACTTAATTTTT+TGG | - | tig0024902:18108-18127 | Msa1420990:intron | 15.0% |
!!! | AAACATAAAAAGATGTTTTA+AGG | + | tig0024902:18811-18830 | None:intergenic | 15.0% |
!!! | TAAACAAATTTATTTTTCTC+TGG | - | tig0024902:19400-19419 | Msa1420990:five_prime_UTR | 15.0% |
!!! | AAACAAATTTATTTTTCTCT+GGG | - | tig0024902:19401-19420 | Msa1420990:five_prime_UTR | 15.0% |
!! | TTCAATTAACAAAAAGAGTA+GGG | + | tig0024902:15753-15772 | None:intergenic | 20.0% |
!! | ATTCAATTAACAAAAAGAGT+AGG | + | tig0024902:15754-15773 | None:intergenic | 20.0% |
!!! | CTTATTATTTTAATTGCATG+TGG | - | tig0024902:16274-16293 | Msa1420990:intron | 20.0% |
!!! | TTTTTACCTTTCAATTCAAT+GGG | - | tig0024902:16883-16902 | Msa1420990:intron | 20.0% |
!!! | TAAAATTTGGTTTAAGACAT+TGG | + | tig0024902:17008-17027 | None:intergenic | 20.0% |
!! | TTACATTTAGAAATTCCTTA+TGG | - | tig0024902:17869-17888 | Msa1420990:intron | 20.0% |
!! | TATTTGCATTATCTTCTATT+TGG | - | tig0024902:17931-17950 | Msa1420990:intron | 20.0% |
!!! | ATCATTCAAGGTTTAATTTT+TGG | - | tig0024902:17965-17984 | Msa1420990:intron | 20.0% |
!! | TTAAGTAAAAAGGTAATTGT+GGG | + | tig0024902:18103-18122 | None:intergenic | 20.0% |
!! | ATTAAGTAAAAAGGTAATTG+TGG | + | tig0024902:18104-18123 | None:intergenic | 20.0% |
!! | AGCCAAAAAATTAAGTAAAA+AGG | + | tig0024902:18113-18132 | None:intergenic | 20.0% |
!! | ATAATCATGAGTAAAAAGTA+TGG | + | tig0024902:18202-18221 | None:intergenic | 20.0% |
!! | TTAAAATTCTTCTACGTAAT+AGG | - | tig0024902:18469-18488 | Msa1420990:intron | 20.0% |
!! | TAAAATTCTTCTACGTAATA+GGG | - | tig0024902:18470-18489 | Msa1420990:intron | 20.0% |
!! | TAGTACAAAATGTTGTTAAA+TGG | + | tig0024902:18516-18535 | None:intergenic | 20.0% |
!! | AATAATAACATGAAGATTGA+AGG | + | tig0024902:19250-19269 | None:intergenic | 20.0% |
!!! | TCACATTTTTCAAGCTAAAA+TGG | - | tig0024902:16058-16077 | Msa1420990:CDS | 25.0% |
!! | ATCTTTTGTTAGATAGTGTA+AGG | - | tig0024902:16369-16388 | Msa1420990:intron | 25.0% |
!! | TTCATCTCATTAGTTTGAAT+TGG | + | tig0024902:16605-16624 | None:intergenic | 25.0% |
!! | CTTTTTACCTTTCAATTCAA+TGG | - | tig0024902:16882-16901 | Msa1420990:intron | 25.0% |
!! | TCTCATAGTTTGGAATAAAT+CGG | + | tig0024902:16917-16936 | None:intergenic | 25.0% |
!! | CACATCAAATAACAATTTTC+CGG | - | tig0024902:17032-17051 | Msa1420990:intron | 25.0% |
!! | ACATCAAATAACAATTTTCC+GGG | - | tig0024902:17033-17052 | Msa1420990:intron | 25.0% |
!!! | TTTTCAAGAGATTCTTAAAC+CGG | + | tig0024902:17137-17156 | None:intergenic | 25.0% |
! | ATGACATGTTTCAGTATAAA+GGG | + | tig0024902:17186-17205 | None:intergenic | 25.0% |
! | TGTTGAAAAACCAAATTTGA+TGG | - | tig0024902:17412-17431 | Msa1420990:intron | 25.0% |
! | CTATAATTCACCATCAAATT+TGG | + | tig0024902:17425-17444 | None:intergenic | 25.0% |
! | TAGAATTGTCTGATAAAAAC+TGG | - | tig0024902:17442-17461 | Msa1420990:intron | 25.0% |
! | ATTCAGTTACAAATCCTATT+TGG | + | tig0024902:17470-17489 | None:intergenic | 25.0% |
! | GTTTGTACTAGGAATAAATA+TGG | + | tig0024902:17694-17713 | None:intergenic | 25.0% |
!! | AGAAAAATTGAAACTGACTT+TGG | + | tig0024902:17800-17819 | None:intergenic | 25.0% |
! | TCATAAAGAAATACTATGCA+AGG | + | tig0024902:17824-17843 | None:intergenic | 25.0% |
! | GAGATTTAAAGAGATTGAAT+TGG | - | tig0024902:18066-18085 | Msa1420990:intron | 25.0% |
! | TTAAAGAGATTGAATTGGTA+TGG | - | tig0024902:18071-18090 | Msa1420990:intron | 25.0% |
! | ATAACAGTCATATATGTCAA+TGG | + | tig0024902:18230-18249 | None:intergenic | 25.0% |
! | GAAACTAAGTAAACTATTGT+TGG | - | tig0024902:18317-18336 | Msa1420990:intron | 25.0% |
! | TACAAAATGTTGTTAAATGG+AGG | + | tig0024902:18513-18532 | None:intergenic | 25.0% |
!! | ATAGAAGATTAATTTGACTG+TGG | - | tig0024902:18727-18746 | Msa1420990:CDS | 25.0% |
!! | TAGAAGATTAATTTGACTGT+GGG | - | tig0024902:18728-18747 | Msa1420990:CDS | 25.0% |
!!! | AAAAGATGTTTTAAGGTGTT+GGG | + | tig0024902:18804-18823 | None:intergenic | 25.0% |
!!! | AAAAAGATGTTTTAAGGTGT+TGG | + | tig0024902:18805-18824 | None:intergenic | 25.0% |
! | TTACATTGAGAATATCACTT+GGG | - | tig0024902:19282-19301 | Msa1420990:intron | 25.0% |
! | TAGTCATCGTTATAAATGTA+TGG | - | tig0024902:19446-19465 | Msa1420990:five_prime_UTR | 25.0% |
! | TCGTTATAAATGTATGGTTA+TGG | - | tig0024902:19452-19471 | Msa1420990:five_prime_UTR | 25.0% |
! | TCATTTTCATAGCTTCTTAC+CGG | - | tig0024902:15856-15875 | Msa1420990:three_prime_UTR | 30.0% |
AATGAATACTGTAGTAGTAG+TGG | - | tig0024902:15887-15906 | Msa1420990:three_prime_UTR | 30.0% | |
CATTTCATGAGAAAACAAAG+AGG | + | tig0024902:15954-15973 | None:intergenic | 30.0% | |
!!! | AGTGTAAGGTGTTGATTTTT+TGG | - | tig0024902:16383-16402 | Msa1420990:intron | 30.0% |
TATTGTTAAGATTGTCTAGC+AGG | - | tig0024902:16422-16441 | Msa1420990:intron | 30.0% | |
ATTGTTAAGATTGTCTAGCA+GGG | - | tig0024902:16423-16442 | Msa1420990:intron | 30.0% | |
CATTGAGCAACAAATATACA+AGG | + | tig0024902:16495-16514 | None:intergenic | 30.0% | |
!! | TACTGAGCCTTGTATATTTT+TGG | - | tig0024902:16517-16536 | Msa1420990:intron | 30.0% |
GATTGAGCCAAAAATATACA+AGG | + | tig0024902:16527-16546 | None:intergenic | 30.0% | |
TAATGAGATGAAGTTTACCT+AGG | - | tig0024902:16613-16632 | Msa1420990:intron | 30.0% | |
AATGAGATGAAGTTTACCTA+GGG | - | tig0024902:16614-16633 | Msa1420990:intron | 30.0% | |
!! | GTATCAGTTTTTCAATCCAA+TGG | - | tig0024902:16845-16864 | Msa1420990:intron | 30.0% |
TTTATTCCAAACTATGAGAG+AGG | - | tig0024902:16918-16937 | Msa1420990:intron | 30.0% | |
TAAAATCAAAGTCGAGGATA+TGG | + | tig0024902:16978-16997 | None:intergenic | 30.0% | |
TGGAAGAACATGAAAAAATG+AGG | + | tig0024902:17066-17085 | None:intergenic | 30.0% | |
GAAAGTTTGTGAATGAGTTT+CGG | + | tig0024902:17097-17116 | None:intergenic | 30.0% | |
GGTTTAAGAATCTCTTGAAA+AGG | - | tig0024902:17136-17155 | Msa1420990:intron | 30.0% | |
GATGACATGTTTCAGTATAA+AGG | + | tig0024902:17187-17206 | None:intergenic | 30.0% | |
! | AAATCTCTAAAGGCTGAAAT+AGG | + | tig0024902:17209-17228 | None:intergenic | 30.0% |
CCAACTTTACAAATCTCTAA+AGG | + | tig0024902:17219-17238 | None:intergenic | 30.0% | |
! | CCTTTAGAGATTTGTAAAGT+TGG | - | tig0024902:17216-17235 | Msa1420990:intron | 30.0% |
! | ACACAAAGGTATATTGTAGA+GGG | + | tig0024902:17245-17264 | None:intergenic | 30.0% |
ATACAACTGTTAACACACAA+AGG | + | tig0024902:17259-17278 | None:intergenic | 30.0% | |
! | GTGTTCTTTATTTATCAGCA+TGG | + | tig0024902:17297-17316 | None:intergenic | 30.0% |
GATAAAAACTGGTACCAAAT+AGG | - | tig0024902:17453-17472 | Msa1420990:intron | 30.0% | |
ACACAGAACTAAAATTACAC+AGG | - | tig0024902:17558-17577 | Msa1420990:intron | 30.0% | |
GTTATTGTAGAATTATTGCG+TGG | + | tig0024902:17653-17672 | None:intergenic | 30.0% | |
! | GCATATTTTCTGTTTGTACT+AGG | + | tig0024902:17705-17724 | None:intergenic | 30.0% |
TGTGCAGTTAGTATCTATTA+TGG | + | tig0024902:17758-17777 | None:intergenic | 30.0% | |
GCATAGTATTTCTTTATGAG+AGG | - | tig0024902:17825-17844 | Msa1420990:intron | 30.0% | |
CATTTAGAAATTCCTTATGG+CGG | - | tig0024902:17872-17891 | Msa1420990:intron | 30.0% | |
ATTTAGAAATTCCTTATGGC+GGG | - | tig0024902:17873-17892 | Msa1420990:intron | 30.0% | |
!!! | ATTTTTTGGCTCTAAACATG+AGG | - | tig0024902:18122-18141 | Msa1420990:intron | 30.0% |
GGAAGTCATGACAAAAAAAA+TGG | + | tig0024902:18181-18200 | None:intergenic | 30.0% | |
!!! | GTTTTTTCCATCTCTTTTTG+CGG | - | tig0024902:18285-18304 | Msa1420990:intron | 30.0% |
!!! | TTTTTTCCATCTCTTTTTGC+GGG | - | tig0024902:18286-18305 | Msa1420990:intron | 30.0% |
TAAACTATTGTTGGATAGCA+AGG | - | tig0024902:18326-18345 | Msa1420990:intron | 30.0% | |
TTGTTAAATGGAGGATATAG+TGG | + | tig0024902:18504-18523 | None:intergenic | 30.0% | |
TTGTACTAAATAACGTATCG+TGG | - | tig0024902:18528-18547 | Msa1420990:intron | 30.0% | |
ACTATACCACTATAATGTAG+CGG | + | tig0024902:18577-18596 | None:intergenic | 30.0% | |
TTGTTAAATAGCAGCTATAG+TGG | + | tig0024902:18601-18620 | None:intergenic | 30.0% | |
! | ACAGATTTTGTGACAATGTT+TGG | - | tig0024902:18979-18998 | Msa1420990:exon | 30.0% |
TTTCTATCGTATTGTCAACA+AGG | - | tig0024902:19113-19132 | Msa1420990:intron | 30.0% | |
TAATAACATAGTGTAGATGC+TGG | + | tig0024902:19214-19233 | None:intergenic | 30.0% | |
GTTACATTGAGAATATCACT+TGG | - | tig0024902:19281-19300 | Msa1420990:intron | 30.0% | |
ATTTGTTTACATAGAGCTCA+TGG | + | tig0024902:19389-19408 | None:intergenic | 30.0% | |
! | CTCTCTCGATTAGTTAATCT+TGG | - | tig0024902:15661-15680 | Msa1420990:three_prime_UTR | 35.0% |
! | TTAATCTTGGCGATCGATTT+AGG | - | tig0024902:15674-15693 | Msa1420990:three_prime_UTR | 35.0% |
AAAATAATCGCGAAGAAGGA+AGG | + | tig0024902:15713-15732 | None:intergenic | 35.0% | |
CCAAAAAATAATCGCGAAGA+AGG | + | tig0024902:15717-15736 | None:intergenic | 35.0% | |
!!! | CCTTCTTCGCGATTATTTTT+TGG | - | tig0024902:15714-15733 | Msa1420990:three_prime_UTR | 35.0% |
! | TGATTCTGCTACTTGAAACT+GGG | - | tig0024902:15815-15834 | Msa1420990:three_prime_UTR | 35.0% |
CAGTATTCATTATATTCCGC+CGG | + | tig0024902:15878-15897 | None:intergenic | 35.0% | |
CAGTTTGATAAGGTAGGTTT+CGG | - | tig0024902:16194-16213 | Msa1420990:intron | 35.0% | |
GGAAACACAAGTTAAAAGCA+AGG | - | tig0024902:16323-16342 | Msa1420990:intron | 35.0% | |
TAAAAGCAAGGTCTCTATCA+AGG | - | tig0024902:16335-16354 | Msa1420990:intron | 35.0% | |
!!! | AAGGTGTTGATTTTTTGGTG+AGG | - | tig0024902:16388-16407 | Msa1420990:intron | 35.0% |
! | TCTCATTAGTTTGAATTGGC+TGG | + | tig0024902:16601-16620 | None:intergenic | 35.0% |
GTCGCATTTCAGTTTAAGTA+TGG | - | tig0024902:16636-16655 | Msa1420990:intron | 35.0% | |
TTACCTTTCAATTCAATGGG+TGG | - | tig0024902:16886-16905 | Msa1420990:intron | 35.0% | |
!! | TCCTCGACTTTGATTTTACT+TGG | - | tig0024902:16980-16999 | Msa1420990:intron | 35.0% |
TCCAAGTAAAATCAAAGTCG+AGG | + | tig0024902:16984-17003 | None:intergenic | 35.0% | |
AAAAAATGAGGAAGAGAACC+CGG | + | tig0024902:17054-17073 | None:intergenic | 35.0% | |
AAGAATCTCTTGAAAAGGTG+TGG | - | tig0024902:17141-17160 | Msa1420990:intron | 35.0% | |
! | CACACAAAGGTATATTGTAG+AGG | + | tig0024902:17246-17265 | None:intergenic | 35.0% |
TGTGTGTTAACAGTTGTATC+TGG | - | tig0024902:17260-17279 | Msa1420990:intron | 35.0% | |
ACAATTCAAGTCCACAAATC+AGG | - | tig0024902:17315-17334 | Msa1420990:intron | 35.0% | |
TCCACAAATCAGGATCAAAT+AGG | - | tig0024902:17325-17344 | Msa1420990:intron | 35.0% | |
CCACAAATCAGGATCAAATA+GGG | - | tig0024902:17326-17345 | Msa1420990:intron | 35.0% | |
AGAATTATTGCGTGGTTAAC+TGG | + | tig0024902:17645-17664 | None:intergenic | 35.0% | |
TAAAGATGCCTAACTTGAGA+GGG | + | tig0024902:17902-17921 | None:intergenic | 35.0% | |
TTAAAGATGCCTAACTTGAG+AGG | + | tig0024902:17903-17922 | None:intergenic | 35.0% | |
TAAACATGAGGTTCATTTGC+CGG | - | tig0024902:18134-18153 | Msa1420990:intron | 35.0% | |
ATGAGATCGTATAGTGCAAA+AGG | + | tig0024902:18265-18284 | None:intergenic | 35.0% | |
! | ACTTTTACATGAACAAGCCA+TGG | + | tig0024902:18386-18405 | None:intergenic | 35.0% |
AACGTATCGTGGAACAATAA+CGG | - | tig0024902:18539-18558 | Msa1420990:intron | 35.0% | |
CAAATTCCGCTACATTATAG+TGG | - | tig0024902:18568-18587 | Msa1420990:intron | 35.0% | |
GAACACTCAGAGTAAAGAAA+AGG | + | tig0024902:18917-18936 | None:intergenic | 35.0% | |
! | TCTTTTCACTTTCCAATCAC+AGG | - | tig0024902:18941-18960 | Msa1420990:CDS | 35.0% |
! | CTTTTCACTTTCCAATCACA+GGG | - | tig0024902:18942-18961 | Msa1420990:CDS | 35.0% |
! | CAAAGCATCTTGTAAGATGA+AGG | + | tig0024902:19006-19025 | None:intergenic | 35.0% |
! | GTGATTCTGCTACTTGAAAC+TGG | - | tig0024902:15814-15833 | Msa1420990:three_prime_UTR | 40.0% |
! | TTTTCATAGCTTCTTACCGG+CGG | - | tig0024902:15859-15878 | Msa1420990:three_prime_UTR | 40.0% |
TTAACAAGACTGACTGCACT+AGG | + | tig0024902:15993-16012 | None:intergenic | 40.0% | |
CTTTATCGTAGGTCGACAAT+CGG | - | tig0024902:16092-16111 | Msa1420990:intron | 40.0% | |
GGTTCTCGTTCAGTTTGATA+AGG | - | tig0024902:16184-16203 | Msa1420990:intron | 40.0% | |
CTCGTTCAGTTTGATAAGGT+AGG | - | tig0024902:16188-16207 | Msa1420990:intron | 40.0% | |
GATAAGGTAGGTTTCGGAAT+TGG | - | tig0024902:16200-16219 | Msa1420990:intron | 40.0% | |
GAGACTACATGTTTCGTTTC+TGG | - | tig0024902:16229-16248 | Msa1420990:intron | 40.0% | |
! | ACATGTTTCGTTTCTGGATC+TGG | - | tig0024902:16235-16254 | Msa1420990:intron | 40.0% |
!!! | TTTTTTGGTGAGGTGAAGCA+TGG | - | tig0024902:16398-16417 | Msa1420990:intron | 40.0% |
TTAAGATTGTCTAGCAGGGA+TGG | - | tig0024902:16427-16446 | Msa1420990:intron | 40.0% | |
TTAAACTGAAATGCGACCCT+AGG | + | tig0024902:16633-16652 | None:intergenic | 40.0% | |
CAACCACCCATTGAATTGAA+AGG | + | tig0024902:16892-16911 | None:intergenic | 40.0% | |
ACATCTCCTCTCTCATAGTT+TGG | + | tig0024902:16927-16946 | None:intergenic | 40.0% | |
AGTTTGTGAATGAGTTTCGG+AGG | + | tig0024902:17094-17113 | None:intergenic | 40.0% | |
! | CCCTATTTGATCCTGATTTG+TGG | + | tig0024902:17329-17348 | None:intergenic | 40.0% |
TTGTGAACTGTCTCTGACTT+GGG | + | tig0024902:17532-17551 | None:intergenic | 40.0% | |
ATTGTGAACTGTCTCTGACT+TGG | + | tig0024902:17533-17552 | None:intergenic | 40.0% | |
! | GGATTAGTGAAACACAGTCA+CGG | - | tig0024902:17579-17598 | Msa1420990:intron | 40.0% |
ATTGCGTGGTTAACTGGAAT+AGG | + | tig0024902:17639-17658 | None:intergenic | 40.0% | |
GAGAAGAAACGCATCATTCA+AGG | - | tig0024902:17953-17972 | Msa1420990:intron | 40.0% | |
AAACATGAGGTTCATTTGCC+GGG | - | tig0024902:18135-18154 | Msa1420990:intron | 40.0% | |
ATATGACCAAACTGCATACC+CGG | + | tig0024902:18156-18175 | None:intergenic | 40.0% | |
! | TCTCATGATGATGACAACCA+TGG | - | tig0024902:18366-18385 | Msa1420990:intron | 40.0% |
GAAGACAACCAAGAGAATGT+TGG | - | tig0024902:19035-19054 | Msa1420990:intron | 40.0% | |
ACAACCAAGAGAATGTTGGA+CGG | - | tig0024902:19039-19058 | Msa1420990:intron | 40.0% | |
!! | TGTTGGACGGGTTAAAATAG+TGG | - | tig0024902:19052-19071 | Msa1420990:intron | 40.0% |
TGAGAATATCACTTGGGAAC+TGG | - | tig0024902:19288-19307 | Msa1420990:intron | 40.0% | |
TTTCTCTGGGCAAACATCTA+TGG | - | tig0024902:19414-19433 | Msa1420990:five_prime_UTR | 40.0% | |
CGACGTTCGAACTTTATCGT+AGG | - | tig0024902:16081-16100 | Msa1420990:intron | 45.0% | |
AATGTGCCTCACTGAGACTT+TGG | - | tig0024902:16115-16134 | Msa1420990:intron | 45.0% | |
TTGGACGAGATGGTTCAGAA+TGG | - | tig0024902:16134-16153 | Msa1420990:intron | 45.0% | |
TAGTCCTGAGATTGCGATTC+AGG | - | tig0024902:16163-16182 | Msa1420990:intron | 45.0% | |
AGAACCTGAATCGCAATCTC+AGG | + | tig0024902:16170-16189 | None:intergenic | 45.0% | |
! | TAGGTTTCGGAATTGGTGCT+AGG | - | tig0024902:16207-16226 | Msa1420990:intron | 45.0% |
GTAGTCTATGACTGAAGCTC+TGG | - | tig0024902:16302-16321 | Msa1420990:intron | 45.0% | |
AATCAGAGAGACGAAGGGTT+TGG | - | tig0024902:16543-16562 | Msa1420990:intron | 45.0% | |
!! | CAGACGTAACTTGTTACGAG+TGG | - | tig0024902:16724-16743 | Msa1420990:intron | 45.0% |
AGCAAAAGTGACACAGCCAT+TGG | + | tig0024902:16864-16883 | None:intergenic | 45.0% | |
AATGAGTTTCGGAGGATGGA+TGG | + | tig0024902:17086-17105 | None:intergenic | 45.0% | |
TGTGAATGAGTTTCGGAGGA+TGG | + | tig0024902:17090-17109 | None:intergenic | 45.0% | |
TCTGATCACGCTCATTGTTC+CGG | - | tig0024902:17115-17134 | Msa1420990:intron | 45.0% | |
! | CTCTTGAAAAGGTGTGGCAT+TGG | - | tig0024902:17147-17166 | Msa1420990:intron | 45.0% |
!! | AGAAAGCTCTAGAACCCTTG+TGG | + | tig0024902:17608-17627 | None:intergenic | 45.0% |
AGCACGCCAACAACATGAAA+CGG | + | tig0024902:18757-18776 | None:intergenic | 45.0% | |
TATGCAGATGTCCCTGTGAT+TGG | + | tig0024902:18956-18975 | None:intergenic | 45.0% | |
CAACCAAGAGAATGTTGGAC+GGG | - | tig0024902:19040-19059 | Msa1420990:intron | 45.0% | |
TAACCCGTCCAACATTCTCT+TGG | + | tig0024902:19046-19065 | None:intergenic | 45.0% | |
ACAAGGAGCTTATCATCTGC+TGG | - | tig0024902:19130-19149 | Msa1420990:intron | 45.0% | |
CTTATCATCTGCTGGTACCA+TGG | - | tig0024902:19138-19157 | Msa1420990:intron | 45.0% | |
ATGGTCTAACCACCAATCCA+TGG | + | tig0024902:19158-19177 | None:intergenic | 45.0% | |
TGGTGGTTAGACCATAGTGA+CGG | - | tig0024902:19163-19182 | Msa1420990:intron | 45.0% | |
!! | TTAGACCATAGTGACGGATG+TGG | - | tig0024902:19169-19188 | Msa1420990:intron | 45.0% |
TCTCGTCCAAAGTCTCAGTG+AGG | + | tig0024902:16124-16143 | None:intergenic | 50.0% | |
CACTGAGACTTTGGACGAGA+TGG | - | tig0024902:16124-16143 | Msa1420990:intron | 50.0% | |
TGGCTCAATCAGAGAGACGA+AGG | - | tig0024902:16537-16556 | Msa1420990:intron | 50.0% | |
GGCTCAATCAGAGAGACGAA+GGG | - | tig0024902:16538-16557 | Msa1420990:intron | 50.0% | |
AGAGATACGCACACTGTGTG+TGG | - | tig0024902:16682-16701 | Msa1420990:intron | 50.0% | |
TGTGTGTGGACACTTGTGTG+AGG | - | tig0024902:16696-16715 | Msa1420990:intron | 50.0% | |
ACACAGTCACGGTTTCCACA+AGG | - | tig0024902:17590-17609 | Msa1420990:intron | 50.0% | |
CACAGTCACGGTTTCCACAA+GGG | - | tig0024902:17591-17610 | Msa1420990:intron | 50.0% | |
CATTTGCCGGGTATGCAGTT+TGG | - | tig0024902:18147-18166 | Msa1420990:intron | 50.0% | |
! | TCCATCTCTTTTTGCGGGAG+TGG | - | tig0024902:18291-18310 | Msa1420990:intron | 50.0% |
! | CCATCTCTTTTTGCGGGAGT+GGG | - | tig0024902:18292-18311 | Msa1420990:intron | 50.0% |
CATCTGCTGGTACCATGGAT+TGG | - | tig0024902:19143-19162 | Msa1420990:intron | 50.0% | |
ATGTGGCCTTCAGTTCTTGC+AGG | - | tig0024902:19186-19205 | Msa1420990:intron | 50.0% | |
CTGGTTCCTGCAAGAACTGA+AGG | + | tig0024902:19195-19214 | None:intergenic | 50.0% | |
AGAGAGACGAAGGGTTTGGC+TGG | - | tig0024902:16547-16566 | Msa1420990:intron | 55.0% | |
!! | TGGTAAGTGAGAGCACCCTC+AGG | - | tig0024902:16567-16586 | Msa1420990:intron | 55.0% |
!! | TGAGAGGGTATCCCGCCATA+AGG | + | tig0024902:17887-17906 | None:intergenic | 55.0% |
GCGGGATACCCTCTCAAGTT+AGG | - | tig0024902:17891-17910 | Msa1420990:intron | 55.0% | |
CCCACTCCCGCAAAAAGAGA+TGG | + | tig0024902:18295-18314 | None:intergenic | 55.0% | |
! | GGGCTGCCGTTTCATGTTGT+TGG | - | tig0024902:18748-18767 | Msa1420990:intron | 55.0% |
TTGGCGTGCTCAGTAGCTTG+TGG | - | tig0024902:18767-18786 | Msa1420990:intron | 55.0% | |
! | TGGCGTGCTCAGTAGCTTGT+GGG | - | tig0024902:18768-18787 | Msa1420990:intron | 55.0% |
!! | CTGCTGGTACCATGGATTGG+TGG | - | tig0024902:19146-19165 | Msa1420990:intron | 55.0% |
GAAGGCCACATCCGTCACTA+TGG | + | tig0024902:19177-19196 | None:intergenic | 55.0% | |
TGGCTGGCAGTGTGACCTGA+GGG | + | tig0024902:16585-16604 | None:intergenic | 60.0% | |
TTGGCTGGCAGTGTGACCTG+AGG | + | tig0024902:16586-16605 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0024902 | gene | 15575 | 19484 | 15575 | ID=Msa1420990;Name=Msa1420990 |
tig0024902 | mRNA | 15575 | 19484 | 15575 | ID=Msa1420990-mRNA-1;Parent=Msa1420990;Name=Msa1420990-mRNA-1;_AED=0.23;_eAED=0.23;_QI=141|1|1|1|0.66|0.5|4|381|106 |
tig0024902 | exon | 15575 | 16096 | 15575 | ID=Msa1420990-mRNA-1:exon:1863;Parent=Msa1420990-mRNA-1 |
tig0024902 | exon | 18703 | 18753 | 18703 | ID=Msa1420990-mRNA-1:exon:1862;Parent=Msa1420990-mRNA-1 |
tig0024902 | exon | 18854 | 19002 | 18854 | ID=Msa1420990-mRNA-1:exon:1861;Parent=Msa1420990-mRNA-1 |
tig0024902 | exon | 19364 | 19484 | 19364 | ID=Msa1420990-mRNA-1:exon:1860;Parent=Msa1420990-mRNA-1 |
tig0024902 | five_prime_UTR | 19364 | 19484 | 19364 | ID=Msa1420990-mRNA-1:five_prime_utr;Parent=Msa1420990-mRNA-1 |
tig0024902 | five_prime_UTR | 18983 | 19002 | 18983 | ID=Msa1420990-mRNA-1:five_prime_utr;Parent=Msa1420990-mRNA-1 |
tig0024902 | CDS | 18854 | 18982 | 18854 | ID=Msa1420990-mRNA-1:cds;Parent=Msa1420990-mRNA-1 |
tig0024902 | CDS | 18703 | 18753 | 18703 | ID=Msa1420990-mRNA-1:cds;Parent=Msa1420990-mRNA-1 |
tig0024902 | CDS | 15956 | 16096 | 15956 | ID=Msa1420990-mRNA-1:cds;Parent=Msa1420990-mRNA-1 |
tig0024902 | three_prime_UTR | 15575 | 15955 | 15575 | ID=Msa1420990-mRNA-1:three_prime_utr;Parent=Msa1420990-mRNA-1 |
Gene Sequence |
Protein sequence |