Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585960 | XP_003604268.2 | 97.561 | 82 | 2 | 0 | 1 | 82 | 1 | 82 | 1.05e-50 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585960 | G7JEH5 | 97.561 | 82 | 2 | 0 | 1 | 82 | 1 | 82 | 5.01e-51 | 164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0585960 | 0.804701 | 1.904041e-49 | -8.615850e-47 |
| Msa0004920 | Msa0585960 | 0.809881 | 1.519480e-50 | -8.615850e-47 |
| Msa0008410 | Msa0585960 | 0.861251 | 1.169457e-63 | -8.615850e-47 |
| Msa0015300 | Msa0585960 | 0.811566 | 6.568250e-51 | -8.615850e-47 |
| Msa0018620 | Msa0585960 | 0.804312 | 2.294760e-49 | -8.615850e-47 |
| Msa0032260 | Msa0585960 | 0.817828 | 2.693189e-52 | -8.615850e-47 |
| Msa0044020 | Msa0585960 | 0.805934 | 1.050228e-49 | -8.615850e-47 |
| Msa0057140 | Msa0585960 | 0.839726 | 1.333533e-57 | -8.615850e-47 |
| Msa0064350 | Msa0585960 | 0.854482 | 1.195560e-61 | -8.615850e-47 |
| Msa0064380 | Msa0585960 | 0.818254 | 2.157516e-52 | -8.615850e-47 |
| Msa0069330 | Msa0585960 | 0.807745 | 4.349221e-50 | -8.615850e-47 |
| Msa0073670 | Msa0585960 | 0.815508 | 8.920133e-52 | -8.615850e-47 |
| Msa0076000 | Msa0585960 | 0.816510 | 5.328195e-52 | -8.615850e-47 |
| Msa0076040 | Msa0585960 | 0.816003 | 6.917373e-52 | -8.615850e-47 |
| Msa0078650 | Msa0585960 | 0.808766 | 2.635147e-50 | -8.615850e-47 |
| Msa0082280 | Msa0585960 | 0.840368 | 9.067234e-58 | -8.615850e-47 |
| Msa0084940 | Msa0585960 | 0.813358 | 2.664792e-51 | -8.615850e-47 |
| Msa0091610 | Msa0585960 | 0.807861 | 4.109374e-50 | -8.615850e-47 |
| Msa0101690 | Msa0585960 | 0.807205 | 5.663170e-50 | -8.615850e-47 |
| Msa0104550 | Msa0585960 | 0.804174 | 2.452053e-49 | -8.615850e-47 |
| Msa0112560 | Msa0585960 | 0.819024 | 1.442617e-52 | -8.615850e-47 |
| Msa0115370 | Msa0585960 | 0.807437 | 5.056141e-50 | -8.615850e-47 |
| Msa0121820 | Msa0585960 | 0.810084 | 1.374123e-50 | -8.615850e-47 |
| Msa0126370 | Msa0585960 | 0.802263 | 6.094765e-49 | -8.615850e-47 |
| Msa0127310 | Msa0585960 | 0.804366 | 2.236079e-49 | -8.615850e-47 |
| Msa0128860 | Msa0585960 | 0.821552 | 3.800921e-53 | -8.615850e-47 |
| Msa0129060 | Msa0585960 | 0.808405 | 3.148200e-50 | -8.615850e-47 |
| Msa0140300 | Msa0585960 | 0.813246 | 2.820349e-51 | -8.615850e-47 |
| Msa0145520 | Msa0585960 | 0.803444 | 3.476324e-49 | -8.615850e-47 |
| Msa0148100 | Msa0585960 | 0.803165 | 3.969997e-49 | -8.615850e-47 |
| Msa0155430 | Msa0585960 | 0.809121 | 2.213166e-50 | -8.615850e-47 |
| Msa0157100 | Msa0585960 | 0.814748 | 1.315169e-51 | -8.615850e-47 |
| Msa0166750 | Msa0585960 | 0.806839 | 6.767327e-50 | -8.615850e-47 |
| Msa0174730 | Msa0585960 | 0.824238 | 8.994478e-54 | -8.615850e-47 |
| Msa0174770 | Msa0585960 | 0.847981 | 8.196494e-60 | -8.615850e-47 |
| Msa0181610 | Msa0585960 | 0.824911 | 6.246087e-54 | -8.615850e-47 |
| Msa0184020 | Msa0585960 | 0.812410 | 4.300395e-51 | -8.615850e-47 |
| Msa0186890 | Msa0585960 | 0.804133 | 2.500613e-49 | -8.615850e-47 |
| Msa0191050 | Msa0585960 | 0.827591 | 1.438012e-54 | -8.615850e-47 |
| Msa0199690 | Msa0585960 | 0.849110 | 3.989025e-60 | -8.615850e-47 |
| Msa0199880 | Msa0585960 | 0.831431 | 1.675960e-55 | -8.615850e-47 |
| Msa0204980 | Msa0585960 | 0.808836 | 2.546050e-50 | -8.615850e-47 |
| Msa0205850 | Msa0585960 | 0.816195 | 6.266941e-52 | -8.615850e-47 |
| Msa0211840 | Msa0585960 | 0.812366 | 4.394765e-51 | -8.615850e-47 |
| Msa0211860 | Msa0585960 | 0.810922 | 9.058704e-51 | -8.615850e-47 |
| Msa0227400 | Msa0585960 | 0.809544 | 1.795916e-50 | -8.615850e-47 |
| Msa0231880 | Msa0585960 | 0.804398 | 2.201596e-49 | -8.615850e-47 |
| Msa0233350 | Msa0585960 | 0.837552 | 4.860830e-57 | -8.615850e-47 |
| Msa0366890 | Msa0585960 | 0.812578 | 3.950097e-51 | -8.615850e-47 |
| Msa0369450 | Msa0585960 | 0.811155 | 8.062329e-51 | -8.615850e-47 |
| Msa0376300 | Msa0585960 | 0.813880 | 2.046274e-51 | -8.615850e-47 |
| Msa0376310 | Msa0585960 | 0.819738 | 9.920270e-53 | -8.615850e-47 |
| Msa0376690 | Msa0585960 | 0.821386 | 4.151455e-53 | -8.615850e-47 |
| Msa0387730 | Msa0585960 | 0.837911 | 3.930846e-57 | -8.615850e-47 |
| Msa0392940 | Msa0585960 | 0.812850 | 3.444730e-51 | -8.615850e-47 |
| Msa0394400 | Msa0585960 | 0.806207 | 9.199989e-50 | -8.615850e-47 |
| Msa0402330 | Msa0585960 | 0.841893 | 3.604572e-58 | -8.615850e-47 |
| Msa0413450 | Msa0585960 | 0.827383 | 1.612553e-54 | -8.615850e-47 |
| Msa0425220 | Msa0585960 | 0.817867 | 2.639278e-52 | -8.615850e-47 |
| Msa0426330 | Msa0585960 | 0.820964 | 5.193799e-53 | -8.615850e-47 |
| Msa0428170 | Msa0585960 | 0.810106 | 1.359490e-50 | -8.615850e-47 |
| Msa0431340 | Msa0585960 | 0.805467 | 1.316322e-49 | -8.615850e-47 |
| Msa0471590 | Msa0585960 | 0.830364 | 3.061309e-55 | -8.615850e-47 |
| Msa0476460 | Msa0585960 | 0.800838 | 1.194210e-48 | -8.615850e-47 |
| Msa0481480 | Msa0585960 | 0.800128 | 1.666472e-48 | -8.615850e-47 |
| Msa0239450 | Msa0585960 | 0.820771 | 5.751425e-53 | -8.615850e-47 |
| Msa0242230 | Msa0585960 | 0.801044 | 1.084119e-48 | -8.615850e-47 |
| Msa0267970 | Msa0585960 | 0.810710 | 1.006802e-50 | -8.615850e-47 |
| Msa0280430 | Msa0585960 | 0.830141 | 3.471159e-55 | -8.615850e-47 |
| Msa0280610 | Msa0585960 | 0.818635 | 1.768628e-52 | -8.615850e-47 |
| Msa0287650 | Msa0585960 | 0.803834 | 2.885426e-49 | -8.615850e-47 |
| Msa0291500 | Msa0585960 | 0.826077 | 3.305427e-54 | -8.615850e-47 |
| Msa0291520 | Msa0585960 | 0.818927 | 1.518285e-52 | -8.615850e-47 |
| Msa0300120 | Msa0585960 | 0.807338 | 5.306584e-50 | -8.615850e-47 |
| Msa0304590 | Msa0585960 | 0.807792 | 4.252248e-50 | -8.615850e-47 |
| Msa0304660 | Msa0585960 | 0.803910 | 2.782529e-49 | -8.615850e-47 |
| Msa0311700 | Msa0585960 | 0.802442 | 5.598793e-49 | -8.615850e-47 |
| Msa0321190 | Msa0585960 | 0.802746 | 4.846992e-49 | -8.615850e-47 |
| Msa0329350 | Msa0585960 | 0.829816 | 4.165241e-55 | -8.615850e-47 |
| Msa0331700 | Msa0585960 | 0.806191 | 9.274002e-50 | -8.615850e-47 |
| Msa0337650 | Msa0585960 | 0.800766 | 1.235368e-48 | -8.615850e-47 |
| Msa0355270 | Msa0585960 | 0.850736 | 1.400499e-60 | -8.615850e-47 |
| Msa0484740 | Msa0585960 | 0.811557 | 6.597579e-51 | -8.615850e-47 |
| Msa0505150 | Msa0585960 | 0.806173 | 9.354293e-50 | -8.615850e-47 |
| Msa0513440 | Msa0585960 | 0.803523 | 3.348154e-49 | -8.615850e-47 |
| Msa0521050 | Msa0585960 | 0.800198 | 1.613153e-48 | -8.615850e-47 |
| Msa0524500 | Msa0585960 | 0.806394 | 8.403759e-50 | -8.615850e-47 |
| Msa0526890 | Msa0585960 | 0.814343 | 1.616980e-51 | -8.615850e-47 |
| Msa0541860 | Msa0585960 | 0.801277 | 9.712631e-49 | -8.615850e-47 |
| Msa0547720 | Msa0585960 | 0.800559 | 1.361750e-48 | -8.615850e-47 |
| Msa0552810 | Msa0585960 | 0.845156 | 4.840348e-59 | -8.615850e-47 |
| Msa0556790 | Msa0585960 | 0.810919 | 9.070309e-51 | -8.615850e-47 |
| Msa0560470 | Msa0585960 | 0.801182 | 1.016013e-48 | -8.615850e-47 |
| Msa0568820 | Msa0585960 | 0.831453 | 1.655338e-55 | -8.615850e-47 |
| Msa0575470 | Msa0585960 | 0.802300 | 5.989332e-49 | -8.615850e-47 |
| Msa0581070 | Msa0585960 | 0.850580 | 1.549226e-60 | -8.615850e-47 |
| Msa0585960 | Msa0600610 | 0.801887 | 7.284361e-49 | -8.615850e-47 |
| Msa0585960 | Msa0616020 | 0.836206 | 1.071776e-56 | -8.615850e-47 |
| Msa0585960 | Msa0619070 | 0.822926 | 1.823836e-53 | -8.615850e-47 |
| Msa0585960 | Msa0623700 | 0.811739 | 6.020517e-51 | -8.615850e-47 |
| Msa0585960 | Msa0626010 | 0.876639 | 1.190208e-68 | -8.615850e-47 |
| Msa0585960 | Msa0639120 | 0.808561 | 2.915680e-50 | -8.615850e-47 |
| Msa0585960 | Msa0641190 | 0.807914 | 4.004116e-50 | -8.615850e-47 |
| Msa0585960 | Msa0647500 | 0.804411 | 2.188546e-49 | -8.615850e-47 |
| Msa0585960 | Msa0652300 | 0.807003 | 6.248674e-50 | -8.615850e-47 |
| Msa0585960 | Msa0661090 | 0.806852 | 6.724783e-50 | -8.615850e-47 |
| Msa0585960 | Msa0663900 | 0.829091 | 6.249883e-55 | -8.615850e-47 |
| Msa0585960 | Msa0680240 | 0.809875 | 1.524487e-50 | -8.615850e-47 |
| Msa0585960 | Msa0684500 | 0.803819 | 2.905994e-49 | -8.615850e-47 |
| Msa0585960 | Msa0687020 | 0.808181 | 3.513530e-50 | -8.615850e-47 |
| Msa0585960 | Msa0687630 | 0.849574 | 2.962877e-60 | -8.615850e-47 |
| Msa0585960 | Msa0692840 | 0.847841 | 8.956119e-60 | -8.615850e-47 |
| Msa0585960 | Msa0692940 | 0.838492 | 2.784542e-57 | -8.615850e-47 |
| Msa0585960 | Msa0694840 | 0.820586 | 6.343206e-53 | -8.615850e-47 |
| Msa0585960 | Msa0697940 | 0.803359 | 3.620281e-49 | -8.615850e-47 |
| Msa0585960 | Msa0703230 | 0.803399 | 3.551657e-49 | -8.615850e-47 |
| Msa0585960 | Msa0709500 | 0.816456 | 5.479111e-52 | -8.615850e-47 |
| Msa0585960 | Msa0713820 | 0.868326 | 7.096288e-66 | -8.615850e-47 |
| Msa0585960 | Msa0718740 | 0.811166 | 8.020881e-51 | -8.615850e-47 |
| Msa0585960 | Msa0720820 | 0.800790 | 1.221690e-48 | -8.615850e-47 |
| Msa0585960 | Msa0722020 | 0.831314 | 1.790769e-55 | -8.615850e-47 |
| Msa0585960 | Msa0727150 | 0.800777 | 1.228999e-48 | -8.615850e-47 |
| Msa0585960 | Msa0749760 | 0.826899 | 2.106067e-54 | -8.615850e-47 |
| Msa0585960 | Msa0750880 | 0.821315 | 4.311246e-53 | -8.615850e-47 |
| Msa0585960 | Msa0752510 | 0.802282 | 6.040004e-49 | -8.615850e-47 |
| Msa0585960 | Msa0755340 | 0.824791 | 6.664232e-54 | -8.615850e-47 |
| Msa0585960 | Msa0756060 | 0.844413 | 7.679110e-59 | -8.615850e-47 |
| Msa0585960 | Msa0761940 | 0.820293 | 7.404918e-53 | -8.615850e-47 |
| Msa0585960 | Msa0763020 | 0.821255 | 4.449425e-53 | -8.615850e-47 |
| Msa0585960 | Msa0763070 | 0.831244 | 1.862975e-55 | -8.615850e-47 |
| Msa0585960 | Msa0765380 | 0.808154 | 3.559706e-50 | -8.615850e-47 |
| Msa0585960 | Msa0790850 | 0.815066 | 1.118338e-51 | -8.615850e-47 |
| Msa0585960 | Msa0797120 | 0.819142 | 1.356226e-52 | -8.615850e-47 |
| Msa0585960 | Msa0797750 | 0.822806 | 1.944952e-53 | -8.615850e-47 |
| Msa0585960 | Msa0805500 | 0.826644 | 2.422922e-54 | -8.615850e-47 |
| Msa0585960 | Msa0812140 | 0.808940 | 2.419795e-50 | -8.615850e-47 |
| Msa0585960 | Msa0814320 | 0.820699 | 5.974182e-53 | -8.615850e-47 |
| Msa0585960 | Msa0818310 | 0.808005 | 3.830549e-50 | -8.615850e-47 |
| Msa0585960 | Msa0827280 | 0.809991 | 1.438749e-50 | -8.615850e-47 |
| Msa0585960 | Msa0835280 | 0.827550 | 1.470661e-54 | -8.615850e-47 |
| Msa0585960 | Msa0841940 | 0.805338 | 1.400632e-49 | -8.615850e-47 |
| Msa0585960 | Msa0842830 | 0.805435 | 1.336502e-49 | -8.615850e-47 |
| Msa0585960 | Msa0858770 | 0.800694 | 1.277858e-48 | -8.615850e-47 |
| Msa0585960 | Msa0863870 | 0.801906 | 7.219429e-49 | -8.615850e-47 |
| Msa0585960 | Msa0869100 | 0.821313 | 4.314154e-53 | -8.615850e-47 |
| Msa0585960 | Msa0869120 | 0.801883 | 7.295656e-49 | -8.615850e-47 |
| Msa0585960 | Msa0900630 | 0.803596 | 3.232722e-49 | -8.615850e-47 |
| Msa0585960 | Msa0902760 | 0.817018 | 4.099629e-52 | -8.615850e-47 |
| Msa0585960 | Msa0925440 | 0.811932 | 5.465469e-51 | -8.615850e-47 |
| Msa0585960 | Msa0926460 | 0.800831 | 1.198119e-48 | -8.615850e-47 |
| Msa0585960 | Msa0933310 | 0.815639 | 8.339338e-52 | -8.615850e-47 |
| Msa0585960 | Msa0959840 | 0.806013 | 1.011011e-49 | -8.615850e-47 |
| Msa0585960 | Msa0965860 | 0.809687 | 1.672835e-50 | -8.615850e-47 |
| Msa0585960 | Msa0967370 | 0.850503 | 1.627758e-60 | -8.615850e-47 |
| Msa0585960 | Msa0968590 | 0.815860 | 7.445553e-52 | -8.615850e-47 |
| Msa0585960 | Msa0970030 | 0.829436 | 5.154638e-55 | -8.615850e-47 |
| Msa0585960 | Msa0971090 | 0.809408 | 1.920898e-50 | -8.615850e-47 |
| Msa0585960 | Msa1006840 | 0.803941 | 2.740592e-49 | -8.615850e-47 |
| Msa0585960 | Msa1013040 | 0.817461 | 3.258591e-52 | -8.615850e-47 |
| Msa0585960 | Msa1013400 | 0.820728 | 5.883490e-53 | -8.615850e-47 |
| Msa0585960 | Msa1019260 | 0.802280 | 6.047277e-49 | -8.615850e-47 |
| Msa0585960 | Msa1040400 | 0.808528 | 2.963336e-50 | -8.615850e-47 |
| Msa0585960 | Msa1040890 | 0.827902 | 1.210676e-54 | -8.615850e-47 |
| Msa0585960 | Msa1081150 | 0.801301 | 9.605795e-49 | -8.615850e-47 |
| Msa0585960 | Msa1082700 | 0.801616 | 8.278938e-49 | -8.615850e-47 |
| Msa0585960 | Msa1089840 | 0.819327 | 1.231278e-52 | -8.615850e-47 |
| Msa0585960 | Msa1091530 | 0.827749 | 1.317101e-54 | -8.615850e-47 |
| Msa0585960 | Msa1093530 | 0.815257 | 1.014237e-51 | -8.615850e-47 |
| Msa0585960 | Msa1100720 | 0.824176 | 9.300712e-54 | -8.615850e-47 |
| Msa0585960 | Msa1101600 | 0.818282 | 2.126338e-52 | -8.615850e-47 |
| Msa0585960 | Msa1119200 | 0.801908 | 7.211860e-49 | -8.615850e-47 |
| Msa0585960 | Msa1125470 | 0.814765 | 1.304131e-51 | -8.615850e-47 |
| Msa0585960 | Msa1125550 | 0.809651 | 1.702699e-50 | -8.615850e-47 |
| Msa0585960 | Msa1126510 | 0.849284 | 3.570203e-60 | -8.615850e-47 |
| Msa0585960 | Msa1126770 | 0.870942 | 9.960645e-67 | -8.615850e-47 |
| Msa0585960 | Msa1127890 | 0.829214 | 5.833100e-55 | -8.615850e-47 |
| Msa0585960 | Msa1134110 | 0.812132 | 4.945251e-51 | -8.615850e-47 |
| Msa0585960 | Msa1143840 | 0.807295 | 5.419452e-50 | -8.615850e-47 |
| Msa0585960 | Msa1152520 | 0.802474 | 5.516011e-49 | -8.615850e-47 |
| Msa0585960 | Msa1165870 | 0.826425 | 2.731685e-54 | -8.615850e-47 |
| Msa0585960 | Msa1166330 | 0.802004 | 6.890063e-49 | -8.615850e-47 |
| Msa0585960 | Msa1166860 | 0.831366 | 1.738930e-55 | -8.615850e-47 |
| Msa0585960 | Msa1171360 | 0.814999 | 1.157456e-51 | -8.615850e-47 |
| Msa0585960 | Msa1174100 | 0.809741 | 1.628512e-50 | -8.615850e-47 |
| Msa0585960 | Msa1184370 | 0.824655 | 7.174681e-54 | -8.615850e-47 |
| Msa0585960 | Msa1187840 | 0.845271 | 4.507317e-59 | -8.615850e-47 |
| Msa0585960 | Msa1201830 | 0.821761 | 3.399631e-53 | -8.615850e-47 |
| Msa0585960 | Msa1204250 | 0.810847 | 9.402210e-51 | -8.615850e-47 |
| Msa0585960 | Msa1207270 | 0.832776 | 7.795503e-56 | -8.615850e-47 |
| Msa0585960 | Msa1214890 | 0.809296 | 2.029866e-50 | -8.615850e-47 |
| Msa0585960 | Msa1218600 | 0.838359 | 3.013932e-57 | -8.615850e-47 |
| Msa0585960 | Msa1218960 | 0.801048 | 1.082210e-48 | -8.615850e-47 |
| Msa0585960 | Msa1221060 | 0.803573 | 3.268480e-49 | -8.615850e-47 |
| Msa0585960 | Msa1227690 | 0.828020 | 1.134019e-54 | -8.615850e-47 |
| Msa0585960 | Msa1237940 | 0.810204 | 1.294813e-50 | -8.615850e-47 |
| Msa0585960 | Msa1251160 | 0.828827 | 7.241288e-55 | -8.615850e-47 |
| Msa0585960 | Msa1254510 | 0.829284 | 5.611185e-55 | -8.615850e-47 |
| Msa0585960 | Msa1254710 | 0.824985 | 5.999017e-54 | -8.615850e-47 |
| Msa0585960 | Msa1255040 | -0.820769 | 5.758479e-53 | -8.615850e-47 |
| Msa0585960 | Msa1257510 | 0.815271 | 1.007155e-51 | -8.615850e-47 |
| Msa0585960 | Msa1269300 | 0.825019 | 5.889565e-54 | -8.615850e-47 |
| Msa0585960 | Msa1271580 | 0.800755 | 1.241795e-48 | -8.615850e-47 |
| Msa0585960 | Msa1275540 | 0.803408 | 3.535784e-49 | -8.615850e-47 |
| Msa0585960 | Msa1283170 | 0.848181 | 7.220213e-60 | -8.615850e-47 |
| Msa0585960 | Msa1290450 | 0.803694 | 3.085005e-49 | -8.615850e-47 |
| Msa0585960 | Msa1294840 | 0.809800 | 1.582090e-50 | -8.615850e-47 |
| Msa0585960 | Msa1295110 | 0.809596 | 1.749802e-50 | -8.615850e-47 |
| Msa0585960 | Msa1295490 | -0.812916 | 3.331917e-51 | -8.615850e-47 |
| Msa0585960 | Msa1303240 | 0.810024 | 1.415536e-50 | -8.615850e-47 |
| Msa0585960 | Msa1304820 | 0.823803 | 1.138001e-53 | -8.615850e-47 |
| Msa0585960 | Msa1305710 | 0.822178 | 2.722046e-53 | -8.615850e-47 |
| Msa0585960 | Msa1306990 | 0.806711 | 7.202892e-50 | -8.615850e-47 |
| Msa0585960 | Msa1307950 | 0.857310 | 1.780889e-62 | -8.615850e-47 |
| Msa0585960 | Msa1310690 | 0.801561 | 8.495078e-49 | -8.615850e-47 |
| Msa0585960 | Msa1316780 | 0.812195 | 4.789471e-51 | -8.615850e-47 |
| Msa0585960 | Msa1316830 | 0.823743 | 1.175370e-53 | -8.615850e-47 |
| Msa0585960 | Msa1321630 | 0.841344 | 5.031634e-58 | -8.615850e-47 |
| Msa0585960 | Msa1331910 | 0.825919 | 3.605342e-54 | -8.615850e-47 |
| Msa0585960 | Msa1333110 | 0.809600 | 1.746129e-50 | -8.615850e-47 |
| Msa0585960 | Msa1335940 | 0.815930 | 7.183018e-52 | -8.615850e-47 |
| Msa0585960 | Msa1340020 | 0.813437 | 2.561375e-51 | -8.615850e-47 |
| Msa0585960 | Msa1344850 | 0.816293 | 5.960143e-52 | -8.615850e-47 |
| Msa0585960 | Msa1345450 | 0.814545 | 1.458668e-51 | -8.615850e-47 |
| Msa0585960 | Msa1353060 | 0.817348 | 3.455703e-52 | -8.615850e-47 |
| Msa0585960 | Msa1356440 | 0.826225 | 3.048126e-54 | -8.615850e-47 |
| Msa0585960 | Msa1359390 | 0.804313 | 2.293985e-49 | -8.615850e-47 |
| Msa0585960 | Msa1361410 | 0.810757 | 9.834898e-51 | -8.615850e-47 |
| Msa0585960 | Msa1362420 | 0.815226 | 1.030187e-51 | -8.615850e-47 |
| Msa0585960 | Msa1365150 | 0.843447 | 1.393576e-58 | -8.615850e-47 |
| Msa0585960 | Msa1367590 | 0.829318 | 5.504241e-55 | -8.615850e-47 |
| Msa0585960 | Msa1367880 | 0.851861 | 6.732980e-61 | -8.615850e-47 |
| Msa0585960 | Msa1370860 | 0.837305 | 5.620844e-57 | -8.615850e-47 |
| Msa0585960 | Msa1379760 | 0.824145 | 9.456784e-54 | -8.615850e-47 |
| Msa0585960 | Msa1386230 | 0.819324 | 1.232956e-52 | -8.615850e-47 |
| Msa0585960 | Msa1387420 | 0.803596 | 3.232486e-49 | -8.615850e-47 |
| Msa0585960 | Msa1397810 | 0.816279 | 6.002591e-52 | -8.615850e-47 |
| Msa0585960 | Msa1404010 | 0.803246 | 3.819532e-49 | -8.615850e-47 |
| Msa0585960 | Msa1404190 | 0.840620 | 7.793238e-58 | -8.615850e-47 |
| Msa0585960 | Msa1423910 | 0.811237 | 7.741843e-51 | -8.615850e-47 |
| Msa0585960 | Msa1435750 | 0.802457 | 5.558472e-49 | -8.615850e-47 |
| Msa0585960 | Msa1438640 | 0.804654 | 1.947560e-49 | -8.615850e-47 |
| Msa0585960 | Msa1442850 | 0.826541 | 2.563686e-54 | -8.615850e-47 |
| Msa0585960 | Msa1450280 | 0.816917 | 4.319242e-52 | -8.615850e-47 |
| Msa0585960 | Msa1461280 | 0.831103 | 2.018128e-55 | -8.615850e-47 |
| Msa0585960 | Msa1465080 | 0.822273 | 2.587305e-53 | -8.615850e-47 |
| Msa0585960 | Msa1466300 | 0.826318 | 2.897454e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585960 | MtrunA17_Chr4g0001601 | 97.561 | 82 | 2 | 0 | 1 | 82 | 1 | 82 | 9.64e-55 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585960 | AT1G16000.1 | 53.488 | 86 | 36 | 1 | 1 | 82 | 1 | 86 | 1.43e-29 | 100 |
| Msa0585960 | AT1G80890.1 | 58.537 | 82 | 32 | 1 | 1 | 82 | 1 | 80 | 1.61e-22 | 82.8 |
Find 22 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTCAACAAAATGTT+AGG | 0.214365 | 4_2:+7072121 | None:intergenic |
| CCAGTAACTCTAGATTTAAA+AGG | 0.295919 | 4_2:+7075391 | Msa0585960:three_prime_UTR |
| AAAAGCGGCGAAGGTGGATT+TGG | 0.337625 | 4_2:+7072225 | Msa0585960:CDS |
| GCTGTTTAAAGCATAGTAAT+AGG | 0.347083 | 4_2:+7075593 | Msa0585960:three_prime_UTR |
| CCAAGTAATCTTGATGAGAT+TGG | 0.353408 | 4_2:-7075275 | None:intergenic |
| CCAATCTCATCAAGATTACT+TGG | 0.403450 | 4_2:+7075275 | Msa0585960:CDS |
| CTTTAAACAGCCAAATCATA+TGG | 0.414121 | 4_2:-7075581 | None:intergenic |
| GCGAAGGTGGATTTGGATCA+AGG | 0.444650 | 4_2:+7072232 | Msa0585960:CDS |
| AAAATTTCAACAAAATGTTA+GGG | 0.452122 | 4_2:+7072122 | None:intergenic |
| CGAGATCATTTGGAAGAAGC+GGG | 0.489411 | 4_2:-7075339 | None:intergenic |
| TTTCAACAAAATGTTAGGGC+TGG | 0.498241 | 4_2:+7072126 | None:intergenic |
| TCGAGATCATTTGGAAGAAG+CGG | 0.559001 | 4_2:-7075340 | None:intergenic |
| AAGGTGAAAAGCGGCGAAGG+TGG | 0.563824 | 4_2:+7072219 | Msa0585960:CDS |
| GGCTGGTTTGATAGAGCAGT+AGG | 0.570320 | 4_2:+7072143 | Msa0585960:five_prime_UTR |
| GCAAAGGTGAAAAGCGGCGA+AGG | 0.571778 | 4_2:+7072216 | Msa0585960:CDS |
| CCATGGTTTCTTATGAACAG+AGG | 0.615850 | 4_2:+7072333 | Msa0585960:CDS |
| GCAAAAGCAAAGGTGAAAAG+CGG | 0.624401 | 4_2:+7072210 | Msa0585960:CDS |
| GGTTTGATAGAGCAGTAGGA+AGG | 0.628990 | 4_2:+7072147 | Msa0585960:five_prime_UTR |
| TTGAATCAAATTCTATATAG+CGG | 0.633543 | 4_2:+7072255 | Msa0585960:CDS |
| CCTCTGTTCATAAGAAACCA+TGG | 0.639570 | 4_2:-7072333 | None:intergenic |
| GAGCAACGAAGCAAAAGCAA+AGG | 0.650954 | 4_2:+7072200 | Msa0585960:CDS |
| TAAAGCATAGTAATAGGACA+AGG | 0.689188 | 4_2:+7075599 | Msa0585960:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAACAAAATTATATAT+TGG | + | chr4_2:7074519-7074538 | Msa0585960:intron | 10.0% |
| !! | AATTTAAATAGACAAATAAT+AGG | - | chr4_2:7075072-7075091 | None:intergenic | 10.0% |
| !! | TATTATTTGTCTATTTAAAT+TGG | + | chr4_2:7075071-7075090 | Msa0585960:intron | 10.0% |
| !!! | TATTGTCAATTTTTTGAAAT+TGG | + | chr4_2:7072398-7072417 | Msa0585960:intron | 15.0% |
| !! | AGATTATGAATATTTCAAAA+AGG | + | chr4_2:7072584-7072603 | Msa0585960:intron | 15.0% |
| !!! | TTGATTTTGTAAAATTGAAT+TGG | + | chr4_2:7074350-7074369 | Msa0585960:intron | 15.0% |
| !! | TTAGTAACAGAATTATATAT+TGG | + | chr4_2:7074452-7074471 | Msa0585960:intron | 15.0% |
| !! | TTAGTAACAGAATTATATAT+TGG | + | chr4_2:7074452-7074471 | Msa0585960:intron | 15.0% |
| !! | ACTAACTACTTTATTAATAA+AGG | - | chr4_2:7074780-7074799 | None:intergenic | 15.0% |
| !! | TTTATTAATAAAGTAGTTAG+TGG | + | chr4_2:7074779-7074798 | Msa0585960:intron | 15.0% |
| !! | AACTAAATGAAATGTATAAA+TGG | - | chr4_2:7075213-7075232 | None:intergenic | 15.0% |
| !! | TTGAATCAAATTCTATATAG+CGG | + | chr4_2:7072255-7072274 | Msa0585960:CDS | 20.0% |
| !!! | TTTGGTTTTACATCAATAAT+GGG | + | chr4_2:7072437-7072456 | Msa0585960:intron | 20.0% |
| !! | ATAGTAAGTGGTTAAATATA+AGG | + | chr4_2:7072644-7072663 | Msa0585960:intron | 20.0% |
| !! | TTAATAACTTCCTATCAATT+TGG | - | chr4_2:7072671-7072690 | None:intergenic | 20.0% |
| !!! | ATTAAGTCCCTTTATTTTTT+TGG | - | chr4_2:7072917-7072936 | None:intergenic | 20.0% |
| !! | ATAGTAAGTGGTTATATATA+GGG | + | chr4_2:7072939-7072958 | Msa0585960:intron | 20.0% |
| !!! | AATTTTTCAGCAACATTTTT+TGG | - | chr4_2:7073518-7073537 | None:intergenic | 20.0% |
| !! | AAAAAATGTTGCTGAAAAAT+TGG | + | chr4_2:7073517-7073536 | Msa0585960:intron | 20.0% |
| !! | AAAAATGTTGCTGAAAAATT+GGG | + | chr4_2:7073518-7073537 | Msa0585960:intron | 20.0% |
| !!! | GAAATACAATCTTTTAAACT+AGG | - | chr4_2:7073953-7073972 | None:intergenic | 20.0% |
| !! | TTAATATTGTGACTGAAAAA+AGG | - | chr4_2:7074003-7074022 | None:intergenic | 20.0% |
| !! | AAAGGAAAAAAAAAACTTGA+GGG | + | chr4_2:7074132-7074151 | Msa0585960:intron | 20.0% |
| !! | ATTATATATTGGCGATTATT+TGG | + | chr4_2:7074463-7074482 | Msa0585960:intron | 20.0% |
| !! | TTATATATTGGCGATTATTT+GGG | + | chr4_2:7074464-7074483 | Msa0585960:intron | 20.0% |
| !! | ATTATATATTGGCGATTATT+TGG | + | chr4_2:7074463-7074482 | Msa0585960:intron | 20.0% |
| !! | TTATATATTGGCGATTATTT+GGG | + | chr4_2:7074464-7074483 | Msa0585960:intron | 20.0% |
| !! | ATTATATATTGGCGATTATT+TGG | + | chr4_2:7074463-7074482 | Msa0585960:intron | 20.0% |
| !! | TTATATATTGGCGATTATTT+GGG | + | chr4_2:7074464-7074483 | Msa0585960:intron | 20.0% |
| !!! | CTCATATTAAGTGTATTTTA+AGG | + | chr4_2:7074681-7074700 | Msa0585960:intron | 20.0% |
| !!! | TGAGTTATATATTTGATAGT+AGG | + | chr4_2:7074953-7074972 | Msa0585960:intron | 20.0% |
| !!! | GAGTTATATATTTGATAGTA+GGG | + | chr4_2:7074954-7074973 | Msa0585960:intron | 20.0% |
| !!! | TGGAACAATTTTTATCATAT+AGG | - | chr4_2:7075564-7075583 | None:intergenic | 20.0% |
| !! | AAAAATTGTTCCATATGATT+TGG | + | chr4_2:7075571-7075590 | Msa0585960:three_prime_UTR | 20.0% |
| !!! | CTTTGGTTTTACATCAATAA+TGG | + | chr4_2:7072436-7072455 | Msa0585960:intron | 25.0% |
| !!! | TTTTAGAACAACTACCAATT+TGG | - | chr4_2:7072553-7072572 | None:intergenic | 25.0% |
| ! | AATATAAGGACCAAATTGAT+AGG | + | chr4_2:7072658-7072677 | Msa0585960:intron | 25.0% |
| ! | ATAGGAAGTTATTAAACCAT+TGG | + | chr4_2:7072676-7072695 | Msa0585960:intron | 25.0% |
| ! | TAGGAAGTTATTAAACCATT+GGG | + | chr4_2:7072677-7072696 | Msa0585960:intron | 25.0% |
| !!! | CCTTTATTTTTTTGGAAACT+CGG | - | chr4_2:7072909-7072928 | None:intergenic | 25.0% |
| ! | CGAGTTTCCAAAAAAATAAA+GGG | + | chr4_2:7072907-7072926 | Msa0585960:intron | 25.0% |
| ! | GATAGTAAGTGGTTATATAT+AGG | + | chr4_2:7072938-7072957 | Msa0585960:intron | 25.0% |
| ! | TAGTAAGTGGTTATATATAG+GGG | + | chr4_2:7072940-7072959 | Msa0585960:intron | 25.0% |
| ! | CAACTTAATTAAGTGTTTAG+AGG | + | chr4_2:7072964-7072983 | Msa0585960:intron | 25.0% |
| ! | AATAAGCTTAAAACAGCTTA+TGG | + | chr4_2:7073119-7073138 | Msa0585960:intron | 25.0% |
| ! | TCAAATAAGCCAATTCAATA+AGG | + | chr4_2:7073210-7073229 | Msa0585960:intron | 25.0% |
| !! | TGGATTAAAAGTGATTTTTG+AGG | - | chr4_2:7073448-7073467 | None:intergenic | 25.0% |
| ! | TGATTTAGATTTAGCAAAGT+TGG | - | chr4_2:7073838-7073857 | None:intergenic | 25.0% |
| ! | AAAAAGAAGATGGGATAAAA+AGG | + | chr4_2:7073916-7073935 | Msa0585960:intron | 25.0% |
| ! | GAAAGGAAAAAAAAAACTTG+AGG | + | chr4_2:7074131-7074150 | Msa0585960:intron | 25.0% |
| ! | AAGGAAAAAAAAAACTTGAG+GGG | + | chr4_2:7074133-7074152 | Msa0585960:intron | 25.0% |
| ! | GAAACATACAATAACAGTAT+GGG | - | chr4_2:7074246-7074265 | None:intergenic | 25.0% |
| ! | AGAAACATACAATAACAGTA+TGG | - | chr4_2:7074247-7074266 | None:intergenic | 25.0% |
| !!! | AATAAAGGTATTGTAGTCAA+TGG | - | chr4_2:7074765-7074784 | None:intergenic | 25.0% |
| ! | GAAAAAGACAATTAATTCCT+CGG | + | chr4_2:7074851-7074870 | Msa0585960:intron | 25.0% |
| !! | CGTAATTTTGAATTTCCAAA+CGG | + | chr4_2:7075183-7075202 | Msa0585960:intron | 25.0% |
| !! | GTAATTTTGAATTTCCAAAC+GGG | + | chr4_2:7075184-7075203 | Msa0585960:intron | 25.0% |
| ! | TCATTTAGTTACTTAATCTG+TGG | + | chr4_2:7075223-7075242 | Msa0585960:intron | 25.0% |
| !!! | AAAGGCATTAGATATTTTAC+TGG | + | chr4_2:7075409-7075428 | Msa0585960:three_prime_UTR | 25.0% |
| AAACCATGGTACAGAAAAAA+CGG | - | chr4_2:7072322-7072341 | None:intergenic | 30.0% | |
| TAACTAGTAAACCACCAAAT+TGG | + | chr4_2:7072536-7072555 | Msa0585960:intron | 30.0% | |
| ATTGGGACTTAATAAACTCA+GGG | + | chr4_2:7072694-7072713 | Msa0585960:intron | 30.0% | |
| CCGAGTTTCCAAAAAAATAA+AGG | + | chr4_2:7072906-7072925 | Msa0585960:intron | 30.0% | |
| AAACACTTGTGAAACAGTTT+GGG | - | chr4_2:7073174-7073193 | None:intergenic | 30.0% | |
| TAAACACTTGTGAAACAGTT+TGG | - | chr4_2:7073175-7073194 | None:intergenic | 30.0% | |
| !! | AACTAAGAGCCTTATTGAAT+TGG | - | chr4_2:7073222-7073241 | None:intergenic | 30.0% |
| !! | TAAGGCTCTTAGTTTTTATC+AGG | + | chr4_2:7073228-7073247 | Msa0585960:intron | 30.0% |
| ACTTCATTAACACTTAGTCA+AGG | - | chr4_2:7073293-7073312 | None:intergenic | 30.0% | |
| AAGTGTTAATGAAGTTCTTC+AGG | + | chr4_2:7073298-7073317 | Msa0585960:intron | 30.0% | |
| !! | CCAAAGATATTTGCTTTTCT+TGG | - | chr4_2:7073468-7073487 | None:intergenic | 30.0% |
| CCAAGAAAAGCAAATATCTT+TGG | + | chr4_2:7073465-7073484 | Msa0585960:intron | 30.0% | |
| !! | TTTTCAGCAACATTTTTTGG+AGG | - | chr4_2:7073515-7073534 | None:intergenic | 30.0% |
| TATTGCTAAATCTCTCTTAC+TGG | + | chr4_2:7073609-7073628 | Msa0585960:intron | 30.0% | |
| !! | GTTTGACCTATAGTTTTACT+TGG | + | chr4_2:7073631-7073650 | Msa0585960:intron | 30.0% |
| TTTGTGTCTGGAAATGTTAA+TGG | - | chr4_2:7073788-7073807 | None:intergenic | 30.0% | |
| !!! | ATTTTGAAGTGATTTGTGTC+TGG | - | chr4_2:7073800-7073819 | None:intergenic | 30.0% |
| !! | AGATTTAGCAAAGTTGGTTT+TGG | - | chr4_2:7073832-7073851 | None:intergenic | 30.0% |
| ! | ATCTTCTTTTTCCTTACAAC+AGG | - | chr4_2:7073907-7073926 | None:intergenic | 30.0% |
| TGTTGTAAGGAAAAAGAAGA+TGG | + | chr4_2:7073906-7073925 | Msa0585960:intron | 30.0% | |
| GTTGTAAGGAAAAAGAAGAT+GGG | + | chr4_2:7073907-7073926 | Msa0585960:intron | 30.0% | |
| !!! | TCGTAACAATTGCTTTTTCA+AGG | - | chr4_2:7074077-7074096 | None:intergenic | 30.0% |
| TTGAAAAAGCAATTGTTACG+AGG | + | chr4_2:7074076-7074095 | Msa0585960:intron | 30.0% | |
| TGAAAAAGCAATTGTTACGA+GGG | + | chr4_2:7074077-7074096 | Msa0585960:intron | 30.0% | |
| ! | TTTCATGCATTGATGCATTT+AGG | - | chr4_2:7074106-7074125 | None:intergenic | 30.0% |
| AGTATGGGTGAAATTCATAT+TGG | - | chr4_2:7074231-7074250 | None:intergenic | 30.0% | |
| ! | GAGTTTGAAATGAAGTGATT+TGG | + | chr4_2:7074381-7074400 | Msa0585960:intron | 30.0% |
| TAATGGCAGTTAGGATTTAA+TGG | + | chr4_2:7074490-7074509 | Msa0585960:intron | 30.0% | |
| TAATGGCAGTTAGGATTTAA+TGG | + | chr4_2:7074490-7074509 | Msa0585960:intron | 30.0% | |
| TAATAAAGTAGTTAGTGGAG+TGG | + | chr4_2:7074784-7074803 | Msa0585960:intron | 30.0% | |
| AACCTAGATACAATAAACGA+AGG | + | chr4_2:7074820-7074839 | Msa0585960:intron | 30.0% | |
| TGGTGTTCTATAATCCTATT+TGG | + | chr4_2:7075091-7075110 | Msa0585960:intron | 30.0% | |
| AATTCATTGTCTCCAAATCT+CGG | - | chr4_2:7075128-7075147 | None:intergenic | 30.0% | |
| !! | AAATGCTTTTCGAGATCATT+TGG | - | chr4_2:7075352-7075371 | None:intergenic | 30.0% |
| !! | CCTTTTAAATCTAGAGTTAC+TGG | - | chr4_2:7075394-7075413 | None:intergenic | 30.0% |
| CCAGTAACTCTAGATTTAAA+AGG | + | chr4_2:7075391-7075410 | Msa0585960:three_prime_UTR | 30.0% | |
| GTACAACAACTTGAGAAAAA+TGG | - | chr4_2:7075474-7075493 | None:intergenic | 30.0% | |
| CTTTAAACAGCCAAATCATA+TGG | - | chr4_2:7075584-7075603 | None:intergenic | 30.0% | |
| ! | GCTGTTTAAAGCATAGTAAT+AGG | + | chr4_2:7075593-7075612 | Msa0585960:three_prime_UTR | 30.0% |
| TAAAGCATAGTAATAGGACA+AGG | + | chr4_2:7075599-7075618 | Msa0585960:three_prime_UTR | 30.0% | |
| GGTTTCGAAGTTCTTATCTT+TGG | + | chr4_2:7072419-7072438 | Msa0585960:intron | 35.0% | |
| TAGAACAACTACCAATTTGG+TGG | - | chr4_2:7072550-7072569 | None:intergenic | 35.0% | |
| CTGAGTTTATTAAGTCCCAA+TGG | - | chr4_2:7072695-7072714 | None:intergenic | 35.0% | |
| CATTGGGACTTAATAAACTC+AGG | + | chr4_2:7072693-7072712 | Msa0585960:intron | 35.0% | |
| TTGGGACTTAATAAACTCAG+GGG | + | chr4_2:7072695-7072714 | Msa0585960:intron | 35.0% | |
| !! | TTGAACTTTGAAACCTAGAG+AGG | - | chr4_2:7072760-7072779 | None:intergenic | 35.0% |
| ! | GGGACTTAATTGATAGTAAG+TGG | + | chr4_2:7072927-7072946 | Msa0585960:intron | 35.0% |
| !! | GCTTATTTTCTAAGCTCTCT+AGG | - | chr4_2:7073106-7073125 | None:intergenic | 35.0% |
| GCTTATTTGAGCTTATCTAC+TGG | - | chr4_2:7073200-7073219 | None:intergenic | 35.0% | |
| AAAAACCTCAACTGGAAAAC+TGG | - | chr4_2:7073363-7073382 | None:intergenic | 35.0% | |
| ! | TTTCCAGTTGAGGTTTTTGA+TGG | + | chr4_2:7073365-7073384 | Msa0585960:intron | 35.0% |
| ATACCATCAAAAACCTCAAC+TGG | - | chr4_2:7073371-7073390 | None:intergenic | 35.0% | |
| ACCAACACACACATTGAAAA+AGG | - | chr4_2:7073572-7073591 | None:intergenic | 35.0% | |
| ACGAGACCAAGTAAAACTAT+AGG | - | chr4_2:7073640-7073659 | None:intergenic | 35.0% | |
| !! | TGTTGAAGCACTGATAAAGA+GGG | - | chr4_2:7073701-7073720 | None:intergenic | 35.0% |
| !! | ATGTTGAAGCACTGATAAAG+AGG | - | chr4_2:7073702-7073721 | None:intergenic | 35.0% |
| AAGAAGATGGGATAAAAAGG+AGG | + | chr4_2:7073919-7073938 | Msa0585960:intron | 35.0% | |
| AAAAAAGGTGAGATAGAGAG+AGG | - | chr4_2:7073988-7074007 | None:intergenic | 35.0% | |
| CAATGCATGAAAACAGAGAA+AGG | + | chr4_2:7074114-7074133 | Msa0585960:intron | 35.0% | |
| !!! | TTTTTTGGGATCTTTGACCA+GGG | - | chr4_2:7074162-7074181 | None:intergenic | 35.0% |
| !!! | TCGATGTGTTCCACTTTTTT+GGG | - | chr4_2:7074176-7074195 | None:intergenic | 35.0% |
| TCTTTCCTTCATCTGTGTTT+GGG | + | chr4_2:7074300-7074319 | Msa0585960:intron | 35.0% | |
| ! | TGAAGTGATTTGGACAGTAT+AGG | + | chr4_2:7074391-7074410 | Msa0585960:intron | 35.0% |
| TGGACAGTATAGGAAACAAT+AGG | + | chr4_2:7074401-7074420 | Msa0585960:intron | 35.0% | |
| CAGTATAGGAAACAATAGGA+AGG | + | chr4_2:7074405-7074424 | Msa0585960:intron | 35.0% | |
| AATAGGAAGGATGACACATT+TGG | + | chr4_2:7074418-7074437 | Msa0585960:intron | 35.0% | |
| ! | GGCGATTATTTGGGATTTAA+TGG | + | chr4_2:7074473-7074492 | Msa0585960:intron | 35.0% |
| ! | TTTGGGATTTAATGGCAGTT+AGG | + | chr4_2:7074481-7074500 | Msa0585960:intron | 35.0% |
| ! | GGCGATTATTTGGGATTTAA+TGG | + | chr4_2:7074473-7074492 | Msa0585960:intron | 35.0% |
| ! | TTTGGGATTTAATGGCAGTT+AGG | + | chr4_2:7074481-7074500 | Msa0585960:intron | 35.0% |
| CACCTTCGTTTATTGTATCT+AGG | - | chr4_2:7074825-7074844 | None:intergenic | 35.0% | |
| !! | ACAATAAACGAAGGTGTCAA+TGG | + | chr4_2:7074829-7074848 | Msa0585960:intron | 35.0% |
| !!! | GTCATTTTAGAATACTACCG+AGG | - | chr4_2:7074871-7074890 | None:intergenic | 35.0% |
| ! | CGTTAAGTTTGCTTGATGTT+TGG | - | chr4_2:7075165-7075184 | None:intergenic | 35.0% |
| TGTATAAATGGATACCCGTT+TGG | - | chr4_2:7075201-7075220 | None:intergenic | 35.0% | |
| CCAAGTAATCTTGATGAGAT+TGG | - | chr4_2:7075278-7075297 | None:intergenic | 35.0% | |
| CCAATCTCATCAAGATTACT+TGG | + | chr4_2:7075275-7075294 | Msa0585960:CDS | 35.0% | |
| TGGAAAAAGCTGATAAAGCA+AGG | + | chr4_2:7075295-7075314 | Msa0585960:CDS | 35.0% | |
| CCGAAAAAACTCGAAAGAAT+GGG | - | chr4_2:7075439-7075458 | None:intergenic | 35.0% | |
| !!! | CCCATTCTTTCGAGTTTTTT+CGG | + | chr4_2:7075436-7075455 | Msa0585960:three_prime_UTR | 35.0% |
| ACCGAAAAAACTCGAAAGAA+TGG | - | chr4_2:7075440-7075459 | None:intergenic | 35.0% | |
| !!! | ATTCTTTCGAGTTTTTTCGG+TGG | + | chr4_2:7075439-7075458 | Msa0585960:three_prime_UTR | 35.0% |
| !!! | TTCTTTCGAGTTTTTTCGGT+GGG | + | chr4_2:7075440-7075459 | Msa0585960:three_prime_UTR | 35.0% |
| GCAAAAGCAAAGGTGAAAAG+CGG | + | chr4_2:7072210-7072229 | Msa0585960:CDS | 40.0% | |
| CCTCTGTTCATAAGAAACCA+TGG | - | chr4_2:7072336-7072355 | None:intergenic | 40.0% | |
| CCATGGTTTCTTATGAACAG+AGG | + | chr4_2:7072333-7072352 | Msa0585960:CDS | 40.0% | |
| ! | GCGACGAAATTGATAGTAAG+TGG | + | chr4_2:7072632-7072651 | Msa0585960:intron | 40.0% |
| GACTTAATAAACTCAGGGGT+TGG | + | chr4_2:7072699-7072718 | Msa0585960:intron | 40.0% | |
| CTGCCTATGATTTACGTGTT+GGG | + | chr4_2:7072789-7072808 | Msa0585960:intron | 40.0% | |
| CTATGATTTACGTGTTGGGT+CGG | + | chr4_2:7072793-7072812 | Msa0585960:intron | 40.0% | |
| TTCTTCAGGAAATCCCAGTT+TGG | + | chr4_2:7073312-7073331 | Msa0585960:intron | 40.0% | |
| TCAACTGGAAAACTGGTGAA+AGG | - | chr4_2:7073356-7073375 | None:intergenic | 40.0% | |
| ! | TTTCACCAGTTTTCCAGTTG+AGG | + | chr4_2:7073355-7073374 | Msa0585960:intron | 40.0% |
| !!! | CTAGGATTTTTTAGGCGAGA+GGG | - | chr4_2:7073413-7073432 | None:intergenic | 40.0% |
| TCGCCTAAAAAATCCTAGCT+TGG | + | chr4_2:7073415-7073434 | Msa0585960:intron | 40.0% | |
| !!! | CTGCCAAGCTAGGATTTTTT+AGG | - | chr4_2:7073421-7073440 | None:intergenic | 40.0% |
| CACACACATTGAAAAAGGCT+TGG | - | chr4_2:7073567-7073586 | None:intergenic | 40.0% | |
| !!! | GCCTTTTTCAATGTGTGTGT+TGG | + | chr4_2:7073568-7073587 | Msa0585960:intron | 40.0% |
| !! | TCAATGTGTGTGTTGGTTCA+AGG | + | chr4_2:7073575-7073594 | Msa0585960:intron | 40.0% |
| AATGACGCTTCAGTAGTTAG+AGG | - | chr4_2:7073667-7073686 | None:intergenic | 40.0% | |
| TACAACAGGTCTTAGTGCAT+GGG | - | chr4_2:7073893-7073912 | None:intergenic | 40.0% | |
| TTACAACAGGTCTTAGTGCA+TGG | - | chr4_2:7073894-7073913 | None:intergenic | 40.0% | |
| ATGCACTAAGACCTGTTGTA+AGG | + | chr4_2:7073893-7073912 | Msa0585960:intron | 40.0% | |
| TAGAGAGAGGAGCTAATTGT+AGG | - | chr4_2:7073975-7073994 | None:intergenic | 40.0% | |
| ! | TAATTTTCCCCCATAGAGTG+TGG | - | chr4_2:7074044-7074063 | None:intergenic | 40.0% |
| !!! | CTTTTTTGGGATCTTTGACC+AGG | - | chr4_2:7074163-7074182 | None:intergenic | 40.0% |
| GGTCAAAGATCCCAAAAAAG+TGG | + | chr4_2:7074163-7074182 | Msa0585960:intron | 40.0% | |
| !!! | GTCGATGTGTTCCACTTTTT+TGG | - | chr4_2:7074177-7074196 | None:intergenic | 40.0% |
| GGGTGAAATTCATATTGGAC+AGG | - | chr4_2:7074226-7074245 | None:intergenic | 40.0% | |
| CAAACACAGATGAAGGAAAG+AGG | - | chr4_2:7074301-7074320 | None:intergenic | 40.0% | |
| CTCTTTCCTTCATCTGTGTT+TGG | + | chr4_2:7074299-7074318 | Msa0585960:intron | 40.0% | |
| GAAGGATGACACATTTGGTT+AGG | + | chr4_2:7074423-7074442 | Msa0585960:intron | 40.0% | |
| ! | GGCGATTATTTGGGATTTGA+TGG | + | chr4_2:7074607-7074626 | Msa0585960:intron | 40.0% |
| ! | TTTGGGATTTGATGGCAGTT+AGG | + | chr4_2:7074615-7074634 | Msa0585960:intron | 40.0% |
| GTTGTTCCTGTTCTGTACTT+TGG | + | chr4_2:7074996-7075015 | Msa0585960:intron | 40.0% | |
| CGGTTTATAGCACACCAAAT+AGG | - | chr4_2:7075108-7075127 | None:intergenic | 40.0% | |
| GTGTGCTATAAACCGAGATT+TGG | + | chr4_2:7075113-7075132 | Msa0585960:intron | 40.0% | |
| !!! | ATTGGTGTTTTGATCCTGCA+AGG | - | chr4_2:7075260-7075279 | None:intergenic | 40.0% |
| TCGAGATCATTTGGAAGAAG+CGG | - | chr4_2:7075343-7075362 | None:intergenic | 40.0% | |
| GGTTTGATAGAGCAGTAGGA+AGG | + | chr4_2:7072147-7072166 | Msa0585960:five_prime_UTR | 45.0% | |
| GAGCAACGAAGCAAAAGCAA+AGG | + | chr4_2:7072200-7072219 | Msa0585960:CDS | 45.0% | |
| !! | GAGAAGAAGCATGTTTTCGC+TGG | + | chr4_2:7072279-7072298 | Msa0585960:CDS | 45.0% |
| !!! | CTGCCGTTTTTTCTGTACCA+TGG | + | chr4_2:7072316-7072335 | Msa0585960:CDS | 45.0% |
| CGTAAATCATAGGCAGCTAG+AGG | - | chr4_2:7072785-7072804 | None:intergenic | 45.0% | |
| GCTGCCTATGATTTACGTGT+TGG | + | chr4_2:7072788-7072807 | Msa0585960:intron | 45.0% | |
| CGACCCAACACGTAAATCAT+AGG | - | chr4_2:7072795-7072814 | None:intergenic | 45.0% | |
| TCAAGGATCGACTAATCTGG+GGG | - | chr4_2:7072878-7072897 | None:intergenic | 45.0% | |
| CTCAAGGATCGACTAATCTG+GGG | - | chr4_2:7072879-7072898 | None:intergenic | 45.0% | |
| GCTCAAGGATCGACTAATCT+GGG | - | chr4_2:7072880-7072899 | None:intergenic | 45.0% | |
| AGCTCAAGGATCGACTAATC+TGG | - | chr4_2:7072881-7072900 | None:intergenic | 45.0% | |
| ! | AGATTAGTCGATCCTTGAGC+TGG | + | chr4_2:7072880-7072899 | Msa0585960:intron | 45.0% |
| AGCAAAGGAAGAGCCAAACT+GGG | - | chr4_2:7073328-7073347 | None:intergenic | 45.0% | |
| !! | TGGTGAAAGGTATCGAGCAA+AGG | - | chr4_2:7073343-7073362 | None:intergenic | 45.0% |
| !!! | GCTAGGATTTTTTAGGCGAG+AGG | - | chr4_2:7073414-7073433 | None:intergenic | 45.0% |
| TTTATGCATGCACTGAGCTG+AGG | + | chr4_2:7073728-7073747 | Msa0585960:intron | 45.0% | |
| TTATGCATGCACTGAGCTGA+GGG | + | chr4_2:7073729-7073748 | Msa0585960:intron | 45.0% | |
| TCGAAAGATGCCACACTCTA+TGG | + | chr4_2:7074031-7074050 | Msa0585960:intron | 45.0% | |
| CGAAAGATGCCACACTCTAT+GGG | + | chr4_2:7074032-7074051 | Msa0585960:intron | 45.0% | |
| GAAAGATGCCACACTCTATG+GGG | + | chr4_2:7074033-7074052 | Msa0585960:intron | 45.0% | |
| AAAGATGCCACACTCTATGG+GGG | + | chr4_2:7074034-7074053 | Msa0585960:intron | 45.0% | |
| AAAAACTTGAGGGGAAACCC+TGG | + | chr4_2:7074142-7074161 | Msa0585960:intron | 45.0% | |
| ACTTGCCCAAACACAGATGA+AGG | - | chr4_2:7074308-7074327 | None:intergenic | 45.0% | |
| GTTTGGGCAAGTGTGATCAA+TGG | + | chr4_2:7074316-7074335 | Msa0585960:intron | 45.0% | |
| GGCAAGTGTGATCAATGGTT+TGG | + | chr4_2:7074321-7074340 | Msa0585960:intron | 45.0% | |
| AAGTAGTTAGTGGAGTGGAG+TGG | + | chr4_2:7074789-7074808 | Msa0585960:intron | 45.0% | |
| CTCTGTCCAAAGTACAGAAC+AGG | - | chr4_2:7075005-7075024 | None:intergenic | 45.0% | |
| TGGAGCTTATGTTTCCTTGC+AGG | + | chr4_2:7075243-7075262 | Msa0585960:intron | 45.0% | |
| CGAGATCATTTGGAAGAAGC+GGG | - | chr4_2:7075342-7075361 | None:intergenic | 45.0% | |
| !!! | TTCGAGTTTTTTCGGTGGGA+TGG | + | chr4_2:7075444-7075463 | Msa0585960:three_prime_UTR | 45.0% |
| !! | AGATTAAAATAAATTTAATA+TGG | - | chr4_2:7073757-7073776 | None:intergenic | 5.0% |
| !!! | ATATTAAATTTATTTTAATC+TGG | + | chr4_2:7073756-7073775 | Msa0585960:intron | 5.0% |
| !! | GGCTGGTTTGATAGAGCAGT+AGG | + | chr4_2:7072143-7072162 | Msa0585960:five_prime_UTR | 50.0% |
| ! | AAAAGCGGCGAAGGTGGATT+TGG | + | chr4_2:7072225-7072244 | Msa0585960:CDS | 50.0% |
| ! | GCGAAGGTGGATTTGGATCA+AGG | + | chr4_2:7072232-7072251 | Msa0585960:CDS | 50.0% |
| !! | AATAAACTCAGGGGTTGGCC+TGG | + | chr4_2:7072704-7072723 | Msa0585960:intron | 50.0% |
| TTCAATTGTGCCCTCGCTAG+TGG | + | chr4_2:7072839-7072858 | Msa0585960:intron | 50.0% | |
| GAAACTCGGTATCCAGCTCA+AGG | - | chr4_2:7072895-7072914 | None:intergenic | 50.0% | |
| GAGCAAAGGAAGAGCCAAAC+TGG | - | chr4_2:7073329-7073348 | None:intergenic | 50.0% | |
| TTGAGGCTTTCTGCCAAGCT+AGG | - | chr4_2:7073431-7073450 | None:intergenic | 50.0% | |
| GGGTCAGAAAGTAAGCAGAG+AGG | + | chr4_2:7074974-7074993 | Msa0585960:intron | 50.0% | |
| !!! | GAGTTTTTTCGGTGGGATGG+AGG | + | chr4_2:7075447-7075466 | Msa0585960:three_prime_UTR | 50.0% |
| GCAAAGGTGAAAAGCGGCGA+AGG | + | chr4_2:7072216-7072235 | Msa0585960:CDS | 55.0% | |
| AAGGTGAAAAGCGGCGAAGG+TGG | + | chr4_2:7072219-7072238 | Msa0585960:CDS | 55.0% | |
| GTGGTGAAGGCTTGGAACCT+AGG | + | chr4_2:7072726-7072745 | Msa0585960:intron | 55.0% | |
| ! | CTAGAGAGGAGCACACTCCT+AGG | - | chr4_2:7072746-7072765 | None:intergenic | 55.0% |
| ! | CTAGGAGTGTGCTCCTCTCT+AGG | + | chr4_2:7072744-7072763 | Msa0585960:intron | 55.0% |
| ATTGTGCCCTCGCTAGTGGA+CGG | + | chr4_2:7072843-7072862 | Msa0585960:intron | 55.0% | |
| !! | AAACTCAGGGGTTGGCCTGG+TGG | + | chr4_2:7072707-7072726 | Msa0585960:intron | 60.0% |
| ! | TTGGCCTGGTGGTGAAGGCT+TGG | + | chr4_2:7072718-7072737 | Msa0585960:intron | 60.0% |
| GGTTCCAAGCCTTCACCACC+AGG | - | chr4_2:7072725-7072744 | None:intergenic | 60.0% | |
| ATCCCACCGTCCACTAGCGA+GGG | - | chr4_2:7072852-7072871 | None:intergenic | 60.0% | |
| AATCCCACCGTCCACTAGCG+AGG | - | chr4_2:7072853-7072872 | None:intergenic | 60.0% | |
| !! | AGGGGTTGGCCTGGTGGTGA+AGG | + | chr4_2:7072713-7072732 | Msa0585960:intron | 65.0% |
| ! | TGCCCTCGCTAGTGGACGGT+GGG | + | chr4_2:7072847-7072866 | Msa0585960:intron | 65.0% |
| ! | GTGCCCTCGCTAGTGGACGG+TGG | + | chr4_2:7072846-7072865 | Msa0585960:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7072132 | 7075695 | 7072132 | ID=Msa0585960;Name=Msa0585960 |
| chr4_2 | mRNA | 7072132 | 7075695 | 7072132 | ID=Msa0585960-mRNA-1;Parent=Msa0585960;Name=Msa0585960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=66|1|1|1|1|1|2|339|82 |
| chr4_2 | exon | 7072132 | 7072354 | 7072132 | ID=Msa0585960-mRNA-1:exon:1761;Parent=Msa0585960-mRNA-1 |
| chr4_2 | exon | 7075265 | 7075695 | 7075265 | ID=Msa0585960-mRNA-1:exon:1762;Parent=Msa0585960-mRNA-1 |
| chr4_2 | five_prime_UTR | 7072132 | 7072197 | 7072132 | ID=Msa0585960-mRNA-1:five_prime_utr;Parent=Msa0585960-mRNA-1 |
| chr4_2 | CDS | 7072198 | 7072354 | 7072198 | ID=Msa0585960-mRNA-1:cds;Parent=Msa0585960-mRNA-1 |
| chr4_2 | CDS | 7075265 | 7075356 | 7075265 | ID=Msa0585960-mRNA-1:cds;Parent=Msa0585960-mRNA-1 |
| chr4_2 | three_prime_UTR | 7075357 | 7075695 | 7075357 | ID=Msa0585960-mRNA-1:three_prime_utr;Parent=Msa0585960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
