AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0133190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133190 MtrunA17_Chr1g0202731 81.788 593 53 6 1 559 1 572 0.0 944
Msa0133190 MtrunA17_Chr1g0202731 97.826 46 1 0 560 605 662 707 3.15e-23 104
Msa0133190 MtrunA17_Chr1g0202741 74.124 599 98 7 4 568 1 576 0.0 848
Msa0133190 MtrunA17_Chr1g0202741 86.957 46 6 0 560 605 657 702 2.14e-20 95.5
Msa0133190 MtrunA17_Chr8g0348531 47.834 577 233 9 28 563 36 585 1.22e-166 492
Msa0133190 MtrunA17_Chr8g0348531 63.043 46 17 0 560 605 671 716 1.59e-12 70.5
Msa0133190 MtrunA17_Chr8g0348521 46.823 598 251 11 6 563 1 571 8.42e-163 481
Msa0133190 MtrunA17_Chr8g0348521 63.043 46 17 0 560 605 656 701 2.50e-12 70.1
Msa0133190 MtrunA17_Chr8g0349071 53.443 305 126 4 235 525 1 303 5.31e-101 309
Msa0133190 MtrunA17_Chr2g0291481 33.473 478 263 8 129 555 128 601 6.15e-79 264
Msa0133190 MtrunA17_Chr4g0058571 29.833 600 338 15 11 561 23 588 2.79e-73 249
Msa0133190 MtrunA17_Chr4g0061441 25.000 348 199 14 194 483 388 731 8.62e-19 90.9
Msa0133190 MtrunA17_Chr2g0301511 28.889 225 114 10 264 445 541 762 1.22e-16 84.0
Msa0133190 MtrunA17_Chr3g0131361 24.889 225 117 6 271 445 522 744 2.48e-15 79.7
Msa0133190 MtrunA17_Chr8g0385411 25.000 232 123 7 261 443 508 737 3.94e-15 79.0
Msa0133190 MtrunA17_Chr8g0387591 25.346 217 113 7 264 436 552 763 2.80e-14 76.3
Msa0133190 MtrunA17_Chr8g0349081 62.222 45 17 0 561 605 77 121 4.01e-14 69.3
Msa0133190 MtrunA17_Chr1g0192121 22.707 229 128 7 262 443 500 726 5.55e-14 75.5
Msa0133190 MtrunA17_Chr3g0131381 24.034 233 129 5 264 450 527 757 6.26e-14 75.5
Msa0133190 MtrunA17_Chr3g0131401 23.529 221 118 7 271 443 541 758 1.58e-13 73.9
Msa0133190 MtrunA17_Chr7g0272591 23.963 217 119 6 271 443 524 738 1.68e-13 73.9
Msa0133190 MtrunA17_Chr7g0238371 25.974 231 110 9 271 443 469 696 1.20e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133190 AT5G23980.1 48.915 599 240 11 14 576 8 576 0.0 548
Msa0133190 AT5G23980.1 76.000 50 11 1 557 605 650 699 3.45e-17 85.9
Msa0133190 AT5G23990.2 48.414 599 243 10 14 576 8 576 0.0 548
Msa0133190 AT5G23990.2 44.444 117 54 4 490 605 593 699 2.97e-19 92.4
Msa0133190 AT1G01580.1 45.378 595 263 8 15 570 28 599 2.57e-173 509
Msa0133190 AT1G01580.1 63.265 49 18 0 557 605 677 725 3.20e-14 76.6
Msa0133190 AT1G01580.2 45.210 595 264 8 15 570 106 677 2.99e-172 509
Msa0133190 AT1G01580.2 63.265 49 18 0 557 605 755 803 3.42e-14 76.6
Msa0133190 AT1G01590.1 43.624 596 262 8 14 560 15 585 2.94e-170 501
Msa0133190 AT1G01590.1 55.102 49 22 0 557 605 656 704 9.44e-12 68.6
Msa0133190 AT5G23990.3 53.881 438 166 4 174 576 8 444 6.51e-162 475
Msa0133190 AT5G23990.3 44.444 117 54 4 490 605 461 567 2.93e-19 92.0
Msa0133190 AT1G23020.6 42.954 589 266 9 14 560 15 575 2.34e-159 473
Msa0133190 AT1G23020.6 61.224 49 19 0 557 605 646 694 2.38e-12 70.5
Msa0133190 AT1G23020.2 42.954 589 266 9 14 560 38 598 2.80e-159 473
Msa0133190 AT1G23020.2 61.224 49 19 0 557 605 669 717 2.35e-12 70.5
Msa0133190 AT5G23990.1 54.292 431 161 4 181 576 105 534 1.49e-158 469
Msa0133190 AT5G23990.1 44.444 117 54 4 490 605 551 657 4.98e-19 91.7
Msa0133190 AT1G23020.4 42.784 589 266 10 14 560 15 574 6.38e-157 466
Msa0133190 AT1G23020.4 61.224 49 19 0 557 605 645 693 2.44e-12 70.5
Msa0133190 AT1G23020.3 42.784 589 266 10 14 560 15 574 6.38e-157 466
Msa0133190 AT1G23020.3 61.224 49 19 0 557 605 645 693 2.44e-12 70.5
Msa0133190 AT1G23020.1 42.784 589 266 10 14 560 38 597 7.35e-157 467
Msa0133190 AT1G23020.1 61.224 49 19 0 557 605 668 716 2.41e-12 70.5
Msa0133190 AT1G23020.5 42.784 589 266 10 14 560 38 597 7.35e-157 467
Msa0133190 AT1G23020.5 61.224 49 19 0 557 605 668 716 2.41e-12 70.5
Msa0133190 AT1G23020.7 42.275 589 266 8 14 560 15 571 1.15e-156 466
Msa0133190 AT1G23020.7 61.224 49 19 0 557 605 642 690 2.33e-12 70.5
Msa0133190 AT5G50160.1 31.207 580 314 17 23 552 19 563 5.83e-79 265
Msa0133190 AT5G49740.3 31.120 482 268 9 129 552 125 600 1.45e-72 247
Msa0133190 AT5G49740.1 31.120 482 268 9 129 552 125 600 2.98e-72 247
Msa0133190 AT5G49730.2 33.253 415 227 5 129 493 116 530 6.48e-71 238
Msa0133190 AT5G49730.1 31.303 476 275 6 129 552 116 591 1.01e-70 243
Msa0133190 AT5G49740.2 32.134 417 229 6 129 493 125 539 1.86e-70 237
Msa0133190 AT5G50160.2 33.505 388 202 10 214 552 4 384 2.05e-65 224
Msa0133190 AT4G25090.2 27.143 210 114 8 271 443 472 679 8.35e-17 84.7
Msa0133190 AT4G25090.1 27.143 210 114 8 271 443 484 691 8.80e-17 84.7
Msa0133190 AT1G19230.1 23.767 223 125 6 264 443 536 756 2.81e-16 83.2
Msa0133190 AT1G19230.2 23.767 223 125 6 264 443 562 782 3.64e-16 82.8
Msa0133190 AT4G11230.1 26.380 326 163 15 260 527 539 845 7.16e-16 82.0
Msa0133190 AT1G64060.1 28.704 216 107 8 264 436 558 769 8.31e-16 81.6
Msa0133190 AT1G09090.2 24.561 228 124 8 261 442 465 690 9.78e-15 78.2
Msa0133190 AT5G51060.1 25.229 218 115 7 271 443 531 745 1.61e-13 74.3
Msa0133190 AT5G47910.1 24.545 220 118 7 262 436 543 759 1.80e-13 74.3
Msa0133190 AT5G07390.1 25.000 212 110 7 271 436 522 730 7.10e-13 72.4
Msa0133190 AT5G07390.2 25.000 212 110 7 271 436 490 698 9.77e-13 72.0

Find 151 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTATGCTTCCTGTTTC+TGG 0.029479 1_3:-64479355 Msa0133190:CDS
CCAAGCCATAACCAGTTATT+TGG 0.139470 1_3:+64479181 None:intergenic
CAACTAGAAGTCACTGTAAA+AGG 0.162417 1_3:+64480701 None:intergenic
ACAAATATTACTATTATTAT+TGG 0.185605 1_3:+64483722 None:intergenic
TTGAATCAATCAGCTTTAAT+TGG 0.229288 1_3:-64478537 Msa0133190:CDS
ACCTCAGAAATTGTGCAGTA+TGG 0.265531 1_3:+64480549 None:intergenic
AGTGACTTCTAGTTGTAATA+TGG 0.269203 1_3:-64480693 Msa0133190:CDS
GAAACCGGTGTGTAAGTAAT+TGG 0.280750 1_3:+64482935 None:intergenic
TCTCCTATCTCAGGTGTATT+AGG 0.286507 1_3:-64479205 Msa0133190:CDS
GATTCCTCTATGTTATAATT+AGG 0.290296 1_3:-64478442 Msa0133190:three_prime_UTR
CTGGCTTGGACATTTATCTA+TGG 0.290976 1_3:-64482600 Msa0133190:intron
GTTGCTAGAATTTGTGCTTC+TGG 0.309657 1_3:-64478580 Msa0133190:CDS
GGAACTTTCTTCTTCGACTT+TGG 0.313524 1_3:-64480609 Msa0133190:CDS
TTATATATAGCTAGTGCTTT+TGG 0.319804 1_3:-64484117 Msa0133190:five_prime_UTR
CAAGGGCATCACAAGGTAAA+AGG 0.320473 1_3:+64481096 None:intergenic
TCTTCTATTCTGCCTCTTGT+TGG 0.326863 1_3:-64482656 Msa0133190:CDS
CATAGATATAGTATATGTTT+TGG 0.335606 1_3:-64483095 Msa0133190:CDS
TAGAATTTGTGCTTCTGGTT+TGG 0.336429 1_3:-64478575 Msa0133190:CDS
TAACAAGCATTCCACGAATA+AGG 0.339631 1_3:-64481301 Msa0133190:CDS
TTCTTGGGTGGCTATCTGTT+TGG 0.342819 1_3:-64483510 Msa0133190:CDS
ACAAAATTAAGTGAAACTTT+TGG 0.346777 1_3:+64478249 None:intergenic
ATACAAACAAGTATGAGTTT+TGG 0.350222 1_3:+64479409 None:intergenic
TGTTTGCTGCACTCTTGATA+TGG 0.359525 1_3:-64482965 Msa0133190:CDS
ACATTCCCTATGATGTTCAT+TGG 0.361666 1_3:-64483280 Msa0133190:CDS
CTTCCTTAGACGTCCATTCC+TGG 0.362695 1_3:-64483039 Msa0133190:CDS
ATATTTGTCTTTACTTTGAC+TGG 0.363874 1_3:-64484226 None:intergenic
TAGGCCCAAATAACTGGTTA+TGG 0.371532 1_3:-64479186 Msa0133190:CDS
AGAGCTCCAATGAACATCAT+AGG 0.372091 1_3:+64483274 None:intergenic
CTTATATTCCATTATTGCTT+AGG 0.373278 1_3:-64483973 Msa0133190:five_prime_UTR
ATAAACAAATCAAAACTATA+TGG 0.376001 1_3:-64479249 Msa0133190:CDS
CATTGCAGCTTGGAAACCTT+TGG 0.378460 1_3:+64480728 None:intergenic
TTATCTGTATAATTCTTTCT+CGG 0.379020 1_3:+64483897 None:intergenic
GGCGAGATTGTAAGAATCTA+AGG 0.379884 1_3:+64481144 None:intergenic
AAGACACCACTATGTATATA+TGG 0.382103 1_3:+64483678 None:intergenic
GTGTATTAGGCCCAAATAAC+TGG 0.386494 1_3:-64479192 Msa0133190:CDS
GGTGTCTATCAATGAGGAAT+AGG 0.392092 1_3:+64481165 None:intergenic
ATAGGGTGTAGCAAATCTTT+TGG 0.394432 1_3:-64484145 Msa0133190:five_prime_UTR
CAAGCATCAAGTATCATATC+TGG 0.397973 1_3:-64482619 Msa0133190:CDS
GAGGTTGGAATTCTTGTTGT+TGG 0.399373 1_3:+64479431 None:intergenic
TGAGCTGTTGAGCCAGAAAC+AGG 0.400901 1_3:+64479343 None:intergenic
TAGTTGGTCTCACGGCTAAC+AGG 0.416194 1_3:+64483771 None:intergenic
TCCATGTGCATGATTGCTCC+TGG 0.416276 1_3:-64481194 Msa0133190:CDS
CATCTTAATATTTCAGTTGA+AGG 0.416390 1_3:-64480584 Msa0133190:CDS
ATACCATAGGCCGTAACAAC+AGG 0.421219 1_3:+64483869 None:intergenic
ATTGTGATCCTAAGCAATAA+TGG 0.422095 1_3:+64483965 None:intergenic
TCCCCTGTTGTTACGGCCTA+TGG 0.422566 1_3:-64483872 Msa0133190:five_prime_UTR
CCTCAGAAATTGTGCAGTAT+GGG 0.426406 1_3:+64480550 None:intergenic
CAAGCCATAACCAGTTATTT+GGG 0.427027 1_3:+64479182 None:intergenic
TAACCAGGAATGGACGTCTA+AGG 0.428137 1_3:+64483036 None:intergenic
TTCCTGGTTATGTCTCCAAT+TGG 0.429119 1_3:-64483023 Msa0133190:CDS
TTACATAGGAAATATATGTT+TGG 0.429325 1_3:-64482708 Msa0133190:CDS
GGATGCAACTCCAGCATGTA+TGG 0.434169 1_3:+64481214 None:intergenic
AAAGGCGAGCTGATAGTAAC+CGG 0.439408 1_3:+64481114 None:intergenic
GTTAGAAACGTGCAGCATAT+TGG 0.439495 1_3:-64484168 Msa0133190:five_prime_UTR
CTATATCTATGACTTCTAAA+GGG 0.450980 1_3:+64483107 None:intergenic
CTGGTCAAACAAGCTGTATC+AGG 0.453029 1_3:-64480630 Msa0133190:CDS
TGTTTATTAGCATCTCTTGA+AGG 0.453374 1_3:+64479265 None:intergenic
ATAGCTGAAACAATTCCAAT+TGG 0.455667 1_3:+64483008 None:intergenic
ACTATATCTATGACTTCTAA+AGG 0.457044 1_3:+64483106 None:intergenic
CTCTCAGATTCTCCTATCTC+AGG 0.458926 1_3:-64479214 Msa0133190:CDS
ATCTCGGATTATAGATATGA+AGG 0.459405 1_3:+64479468 None:intergenic
GCATAAGATCTAACATGGTT+AGG 0.460957 1_3:+64479368 None:intergenic
GGCTTTGAAATATGAGATCT+CGG 0.466764 1_3:+64479452 None:intergenic
TACAATCTCGCCAACATGCC+CGG 0.468113 1_3:-64481133 Msa0133190:CDS
GTCTAATTACTCGGTATAGT+TGG 0.470743 1_3:+64483755 None:intergenic
GATAAGGTCCCCTGTTGTTA+CGG 0.471432 1_3:-64483879 Msa0133190:five_prime_UTR
AATTGGAATTGTTTCAGCTA+TGG 0.474439 1_3:-64483006 Msa0133190:CDS
GGCGCTCTAAAGAGATGTTT+AGG 0.475641 1_3:-64483062 Msa0133190:CDS
TTCAATTCTACATACTTCAG+AGG 0.486109 1_3:-64483430 Msa0133190:CDS
TCTCTTTAGAGCGCCACTGC+TGG 0.489094 1_3:+64483070 None:intergenic
GGGCCTAATACACCTGAGAT+AGG 0.494814 1_3:+64479202 None:intergenic
TTTATGAACACCAAGCTTGT+GGG 0.498876 1_3:+64480755 None:intergenic
CATGCGGAGGTGATCGAAAC+CGG 0.499697 1_3:+64482920 None:intergenic
ATATACATTAATACATGTAC+AGG 0.502760 1_3:+64478387 None:intergenic
TGCACATATGTGCCTGTACA+TGG 0.505523 1_3:-64478332 Msa0133190:three_prime_UTR
ATCAAGTATCATATCTGGCT+TGG 0.506171 1_3:-64482614 Msa0133190:CDS
TCTTTGAGACTTGCTTACAT+AGG 0.511722 1_3:-64482722 Msa0133190:CDS
CCAAATAACTGGTTATGGCT+TGG 0.512969 1_3:-64479181 Msa0133190:CDS
AACTAGAAGTCACTGTAAAA+GGG 0.514748 1_3:+64480702 None:intergenic
TTATTCTATGCCATACATGC+TGG 0.517974 1_3:-64481224 Msa0133190:CDS
TCATAGGGAATGTGAAAAGC+AGG 0.518452 1_3:+64483290 None:intergenic
GAGAAAGAATTATACAGATA+AGG 0.524059 1_3:-64483895 Msa0133190:five_prime_UTR
GTGATGGTGAGTGGCGGAAG+TGG 0.524506 1_3:-64479499 Msa0133190:CDS
TCTCATCTTGTTTGTGCATG+CGG 0.524678 1_3:+64482904 None:intergenic
AAACGTGCAGCATATTGGAT+AGG 0.524943 1_3:-64484163 Msa0133190:five_prime_UTR
GAGCTCCAATGAACATCATA+GGG 0.528983 1_3:+64483275 None:intergenic
GGTGTTCATAAATGTTCCAA+AGG 0.529380 1_3:-64480744 Msa0133190:CDS
AAGACTTCTGTTGGTTACAA+TGG 0.530051 1_3:+64484021 None:intergenic
ACATATGTATCAAATGTAGC+TGG 0.530392 1_3:-64481359 Msa0133190:CDS
ATACTATAACCCCACAAGCT+TGG 0.531979 1_3:-64480765 Msa0133190:CDS
TTGTGCAGTATGGGGTCCGT+AGG 0.532948 1_3:+64480559 None:intergenic
TTCTTGTGATGTTTCTTGGG+TGG 0.536413 1_3:-64483522 Msa0133190:CDS
ATATACATTAATCCATGTAC+AGG 0.536935 1_3:+64478320 None:intergenic
ATTTATGAACACCAAGCTTG+TGG 0.539444 1_3:+64480754 None:intergenic
ATAATGGAATATAAGATATG+TGG 0.540763 1_3:+64483981 None:intergenic
AAAAGAGTGAAGACTTCTGT+TGG 0.548873 1_3:+64484012 None:intergenic
CCCAGGAGCAATCATGCACA+TGG 0.549549 1_3:+64481193 None:intergenic
AGATATAGAGAATGTAGAGA+TGG 0.551790 1_3:+64481246 None:intergenic
TATCCAATTGAAAATAACTC+AGG 0.552964 1_3:-64479091 Msa0133190:intron
TATTTGTCTTTACTTTGACT+GGG 0.553788 1_3:-64484225 None:intergenic
GAGTGTGAAGGCAAAGATGT+TGG 0.554752 1_3:-64478640 Msa0133190:CDS
CTGATAGTAACCGGGCATGT+TGG 0.556977 1_3:+64481123 None:intergenic
ATAGAAGACATTCTTGTGAC+CGG 0.557709 1_3:+64482671 None:intergenic
GTTTATATGTTCATATTGAG+TGG 0.560587 1_3:-64478278 Msa0133190:three_prime_UTR
TTCCAATTGGAGACATAACC+AGG 0.560892 1_3:+64483021 None:intergenic
CAAAGGTTTCCAAGCTGCAA+TGG 0.560929 1_3:-64480727 Msa0133190:CDS
TTACTGTGCTTAATATGTAG+TGG 0.564531 1_3:+64484195 None:intergenic
AACGTGCAGCATATTGGATA+GGG 0.567635 1_3:-64484162 Msa0133190:five_prime_UTR
TGTTGTTACGGCCTATGGTA+TGG 0.568200 1_3:-64483867 Msa0133190:five_prime_UTR
CCCATACTGCACAATTTCTG+AGG 0.569211 1_3:-64480550 Msa0133190:intron
AAAAGGGTGCCATTGCAGCT+TGG 0.569692 1_3:+64480718 None:intergenic
ATTGGAGACATAACCAGGAA+TGG 0.570760 1_3:+64483026 None:intergenic
TGATTTCTCAGATGCTAGAG+TGG 0.575116 1_3:-64481388 Msa0133190:intron
CCATGTGCATGATTGCTCCT+GGG 0.577709 1_3:-64481193 Msa0133190:CDS
CGGTGTGTAAGTAATTGGAA+AGG 0.580568 1_3:+64482940 None:intergenic
GGTGTGTAAGTAATTGGAAA+GGG 0.580721 1_3:+64482941 None:intergenic
TCTACATACTTCAGAGGGCA+AGG 0.581290 1_3:-64483424 Msa0133190:intron
CAGAAAAGTTGCCTTCCAGA+AGG 0.582551 1_3:-64483213 Msa0133190:intron
TCAATTCTACATACTTCAGA+GGG 0.584195 1_3:-64483429 Msa0133190:CDS
ATTGCCTAATTATAACATAG+AGG 0.587466 1_3:+64478438 None:intergenic
CATCTTGTTTGTGCATGCGG+AGG 0.588578 1_3:+64482907 None:intergenic
GAAATTCTGTTTGAGTGTGA+AGG 0.590229 1_3:-64478652 Msa0133190:CDS
ACTCGGTATAGTTGGTCTCA+CGG 0.596382 1_3:+64483763 None:intergenic
ATGAGGAATAGGAAAATCCC+AGG 0.598597 1_3:+64481176 None:intergenic
TGTGCAGTATGGGGTCCGTA+GGG 0.602330 1_3:+64480560 None:intergenic
CAATCACCATATATACATAG+TGG 0.603670 1_3:-64483684 Msa0133190:five_prime_UTR
GAATTAACTAACCTTCTGGA+AGG 0.607404 1_3:+64483202 None:intergenic
GTGTCTCAAGTCTAATTACT+CGG 0.607443 1_3:+64483746 None:intergenic
TTAGATGGGAAGCAAAGTTG+AGG 0.612295 1_3:-64482751 Msa0133190:intron
ATTTCAGTTGAAGGACCCTA+CGG 0.612975 1_3:-64480575 Msa0133190:CDS
TGCATCGTGTAGAATATGAA+AGG 0.613428 1_3:+64483637 None:intergenic
TGGAATGCTTGTTATCCACA+TGG 0.616270 1_3:+64481310 None:intergenic
CTCAGAAATTGTGCAGTATG+GGG 0.616586 1_3:+64480551 None:intergenic
TCTCGGATTATAGATATGAA+GGG 0.617254 1_3:+64479469 None:intergenic
TTATGAACACCAAGCTTGTG+GGG 0.617409 1_3:+64480756 None:intergenic
ATGGAATATAAGATATGTGG+AGG 0.620433 1_3:+64483984 None:intergenic
CTTTCCAATTACTTACACAC+CGG 0.620526 1_3:-64482939 Msa0133190:CDS
GTTTAATAGCGTTAGCCATG+TGG 0.627149 1_3:-64481325 Msa0133190:CDS
TATGCTCACAGCCATACCAT+AGG 0.629729 1_3:+64483856 None:intergenic
AGGAAGCATAAGATCTAACA+TGG 0.631448 1_3:+64479363 None:intergenic
ATCTAAGGTGTCTATCAATG+AGG 0.634860 1_3:+64481159 None:intergenic
GAGCAGATTGTGATGGTGAG+TGG 0.645766 1_3:-64479508 Msa0133190:CDS
TACCATAGGCCGTAACAACA+GGG 0.648138 1_3:+64483870 None:intergenic
TCAGATGTGAGTCCAACAAG+AGG 0.651442 1_3:+64482644 None:intergenic
GATGTTGGAGTTATGACTTG+TGG 0.660013 1_3:-64478625 Msa0133190:CDS
AAGGCGAGCTGATAGTAACC+GGG 0.669575 1_3:+64481115 None:intergenic
CTGAGATAGGAGAATCTGAG+AGG 0.686082 1_3:+64479215 None:intergenic
CAGGCATGAGCAGATTGTGA+TGG 0.694392 1_3:-64479515 Msa0133190:CDS
CGGCTAACAGGATACAACAG+CGG 0.720650 1_3:+64483783 None:intergenic
ACCATAGGCCGTAACAACAG+GGG 0.722972 1_3:+64483871 None:intergenic
CAGATTGTGATGGTGAGTGG+CGG 0.723418 1_3:-64479505 Msa0133190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAATATTACTATTATTAT+TGG + chr1_3:64478761-64478780 None:intergenic 10.0%
!! ATAAAGATTATTGTATAATT+TGG - chr1_3:64479683-64479702 Msa0133190:intron 10.0%
!!! TTTTTATTTTCAAACATAAA+TGG - chr1_3:64480211-64480230 Msa0133190:intron 10.0%
!!! TTTTATTTTCAAACATAAAT+GGG - chr1_3:64480212-64480231 Msa0133190:intron 10.0%
!! GAAACTATTATTATTAATAA+TGG - chr1_3:64480241-64480260 Msa0133190:intron 10.0%
!!! AGAAATATTTTTTTATTACT+CGG + chr1_3:64481627-64481646 None:intergenic 10.0%
!!! TAACAAATTTATCATTTTTT+TGG - chr1_3:64481670-64481689 Msa0133190:intron 10.0%
!!! TTTTTGTTTTATATTTTACT+CGG - chr1_3:64482859-64482878 Msa0133190:intron 10.0%
!!! TTAATGTATATTTTATGATT+AGG - chr1_3:64484105-64484124 Msa0133190:five_prime_UTR 10.0%
!!! TTATTTTTTCTTGATGAAAA+TGG + chr1_3:64479247-64479266 None:intergenic 15.0%
!! ATTAAAGATTCAAGTAATTA+AGG + chr1_3:64479326-64479345 None:intergenic 15.0%
!!! AATTGTCTTTTTTCTTTTTT+TGG + chr1_3:64480018-64480037 None:intergenic 15.0%
!! ATATTGAATTCAAAATTATG+AGG - chr1_3:64480361-64480380 Msa0133190:intron 15.0%
!! TTAAATATCATGAAATTAGT+TGG - chr1_3:64480510-64480529 Msa0133190:intron 15.0%
!! TTACATAGTATTATACTATA+AGG + chr1_3:64480848-64480867 None:intergenic 15.0%
!! TGAAAATAATGAAAATGTTA+TGG + chr1_3:64480890-64480909 None:intergenic 15.0%
!!! ATAACATTTTCATTATTTTC+AGG - chr1_3:64480889-64480908 Msa0133190:intron 15.0%
!!! GTATGTTAATAAACTATTTT+GGG + chr1_3:64480956-64480975 None:intergenic 15.0%
!!! AGTATGTTAATAAACTATTT+TGG + chr1_3:64480957-64480976 None:intergenic 15.0%
!! AAGAAAATCAAAACTTTATA+TGG - chr1_3:64481433-64481452 Msa0133190:intron 15.0%
!!! ATAAATTTGTTAGTAAAACT+TGG + chr1_3:64481662-64481681 None:intergenic 15.0%
!! GTAAAATATAAAACAAAAAC+AGG + chr1_3:64482858-64482877 None:intergenic 15.0%
!! ATAAACAAATCAAAACTATA+TGG - chr1_3:64483231-64483250 Msa0133190:CDS 15.0%
!!! ATAATGGAATATAAGATATG+TGG + chr1_3:64478502-64478521 None:intergenic 20.0%
!! TTATCTGTATAATTCTTTCT+CGG + chr1_3:64478586-64478605 None:intergenic 20.0%
!!! AGTAGTTCTTAACTTTTTTA+GGG - chr1_3:64479159-64479178 Msa0133190:CDS 20.0%
!!! CATAGATATAGTATATGTTT+TGG - chr1_3:64479385-64479404 Msa0133190:CDS 20.0%
!!! TAATTTGGTGTATTGATTAT+TGG - chr1_3:64479698-64479717 Msa0133190:intron 20.0%
!! TTACATAGGAAATATATGTT+TGG - chr1_3:64479772-64479791 Msa0133190:intron 20.0%
!!! CATTGGTTTTATCATTTATT+GGG - chr1_3:64479921-64479940 Msa0133190:intron 20.0%
!! TGAAATTCTGATTCATATTT+AGG - chr1_3:64480037-64480056 Msa0133190:intron 20.0%
!! AAAATTATGAGGAAAAACAA+AGG - chr1_3:64480372-64480391 Msa0133190:intron 20.0%
!! AAATTATGAGGAAAAACAAA+GGG - chr1_3:64480373-64480392 Msa0133190:intron 20.0%
!!! TGTCATTTGTTTTTTACAAT+TGG - chr1_3:64480696-64480715 Msa0133190:CDS 20.0%
!!! GTCATTTGTTTTTTACAATT+GGG - chr1_3:64480697-64480716 Msa0133190:CDS 20.0%
!! GTAAATTACTTATCCAAATA+AGG - chr1_3:64480864-64480883 Msa0133190:intron 20.0%
!!! AAAGTTTTGATTTTCTTACT+AGG + chr1_3:64481430-64481449 None:intergenic 20.0%
!! AAAACTTTATATGGAAGAAT+AGG - chr1_3:64481442-64481461 Msa0133190:intron 20.0%
!! ATATAGTACTGTAAATATGA+AGG - chr1_3:64482004-64482023 Msa0133190:intron 20.0%
!!! AAATATGAAGGTTTTTATTG+TGG - chr1_3:64482016-64482035 Msa0133190:intron 20.0%
!!! TTTTGAAAATACAAACAAGT+AGG + chr1_3:64482644-64482663 None:intergenic 20.0%
!! ATTTATACTGTGGTAAAATA+AGG - chr1_3:64482712-64482731 Msa0133190:CDS 20.0%
!! GGTAAAATAAGGATAAATTA+CGG - chr1_3:64482723-64482742 Msa0133190:CDS 20.0%
!! ATATACATTAATACATGTAC+AGG + chr1_3:64484096-64484115 None:intergenic 20.0%
!! TATAAACATGAAAAACATAG+AGG + chr1_3:64484189-64484208 None:intergenic 20.0%
!! TTATATATAGCTAGTGCTTT+TGG - chr1_3:64478363-64478382 Msa0133190:three_prime_UTR 25.0%
! CTTATATTCCATTATTGCTT+AGG - chr1_3:64478507-64478526 Msa0133190:three_prime_UTR 25.0%
!! TTCTTTCTTTTCTTAAACGT+TGG - chr1_3:64478546-64478565 Msa0133190:CDS 25.0%
! GAGAAAGAATTATACAGATA+AGG - chr1_3:64478585-64478604 Msa0133190:CDS 25.0%
! TCACAAGAAAAATGATTCTT+AGG + chr1_3:64478947-64478966 None:intergenic 25.0%
!! ATTTTTCTTGTGATGTTTCT+TGG - chr1_3:64478954-64478973 Msa0133190:intron 25.0%
!! TTTTTCTTGTGATGTTTCTT+GGG - chr1_3:64478955-64478974 Msa0133190:intron 25.0%
!! ATCTTTTTGTAGATCTTAGT+AGG + chr1_3:64479005-64479024 None:intergenic 25.0%
! TAAGATCTACAAAAAGATCT+GGG - chr1_3:64479007-64479026 Msa0133190:intron 25.0%
!!! CAGTAGTTCTTAACTTTTTT+AGG - chr1_3:64479158-64479177 Msa0133190:CDS 25.0%
!! TTTAGAATTAACTAACCTTC+TGG + chr1_3:64479285-64479304 None:intergenic 25.0%
! CTATATCTATGACTTCTAAA+GGG + chr1_3:64479376-64479395 None:intergenic 25.0%
! ACTATATCTATGACTTCTAA+AGG + chr1_3:64479377-64479396 None:intergenic 25.0%
!!! TTATTGGTCTTTGTATTAGA+TGG - chr1_3:64479714-64479733 Msa0133190:intron 25.0%
!!! TATTGGTCTTTGTATTAGAT+GGG - chr1_3:64479715-64479734 Msa0133190:intron 25.0%
! CCAATAAATGATAAAACCAA+TGG + chr1_3:64479923-64479942 None:intergenic 25.0%
!!! CCATTGGTTTTATCATTTAT+TGG - chr1_3:64479920-64479939 Msa0133190:intron 25.0%
!!! TACTGTACATGTTTTTTTGA+TGG - chr1_3:64479976-64479995 Msa0133190:intron 25.0%
!!! ACTGTACATGTTTTTTTGAT+GGG - chr1_3:64479977-64479996 Msa0133190:intron 25.0%
!!! TGTCTTTTTTCTTTTTTTGG+AGG + chr1_3:64480015-64480034 None:intergenic 25.0%
! CATATTTAGGTACTCTATTT+AGG - chr1_3:64480050-64480069 Msa0133190:intron 25.0%
! TTGAAATCCCATAATATATG+TGG - chr1_3:64480094-64480113 Msa0133190:intron 25.0%
! TAGCTACTAAACTTCATTAT+TGG + chr1_3:64480175-64480194 None:intergenic 25.0%
! TTTCAAACATAAATGGGTAA+AGG - chr1_3:64480218-64480237 Msa0133190:intron 25.0%
! TTCAAACATAAATGGGTAAA+GGG - chr1_3:64480219-64480238 Msa0133190:intron 25.0%
! AAATTGTTATATTGTGCAAG+AGG + chr1_3:64480335-64480354 None:intergenic 25.0%
! TGTTAACTAGAATTCTTGAT+TGG + chr1_3:64480417-64480436 None:intergenic 25.0%
! AAAGAACAAGCTATATTTAG+TGG + chr1_3:64480555-64480574 None:intergenic 25.0%
! ATTTACTACATCAAACTCAA+AGG - chr1_3:64480669-64480688 Msa0133190:CDS 25.0%
!!! TTGTTTTTTACAATTGGGAA+AGG - chr1_3:64480702-64480721 Msa0133190:CDS 25.0%
!!! TGTTTTTTACAATTGGGAAA+GGG - chr1_3:64480703-64480722 Msa0133190:CDS 25.0%
!! GTTTGACTTTGTAATTTCAA+GGG + chr1_3:64480795-64480814 None:intergenic 25.0%
!! AGTTTGACTTTGTAATTTCA+AGG + chr1_3:64480796-64480815 None:intergenic 25.0%
! CATACTATATAAAGAGAGAT+TGG - chr1_3:64480971-64480990 Msa0133190:intron 25.0%
! CATATTAATGATCTTTCTGA+TGG + chr1_3:64480998-64481017 None:intergenic 25.0%
! TTTATATGGAAGAATAGGTT+TGG - chr1_3:64481447-64481466 Msa0133190:intron 25.0%
! TGGTATGTAATTCATATAGA+TGG - chr1_3:64481467-64481486 Msa0133190:intron 25.0%
! TTTGTTAGTAAAACTTGGTT+AGG + chr1_3:64481657-64481676 None:intergenic 25.0%
! TATAGTATAAACCTGAAGTT+AGG + chr1_3:64481703-64481722 None:intergenic 25.0%
! AGTATTGCCATAAAAAATGT+GGG - chr1_3:64481824-64481843 Msa0133190:intron 25.0%
! CATCTTAATATTTCAGTTGA+AGG - chr1_3:64481896-64481915 Msa0133190:intron 25.0%
! GATACTTCAAACTAATAACA+TGG + chr1_3:64482045-64482064 None:intergenic 25.0%
! CATATTTACCAACATTACAT+TGG + chr1_3:64482197-64482216 None:intergenic 25.0%
!! TGTAATGTTGGTAAATATGA+AGG - chr1_3:64482198-64482217 Msa0133190:intron 25.0%
!! GTAATGTTGGTAAATATGAA+GGG - chr1_3:64482199-64482218 Msa0133190:intron 25.0%
!! TTGAGTATATGAATTTTTCG+CGG - chr1_3:64482274-64482293 Msa0133190:intron 25.0%
! TGTTTAAATGTGTTATGTTG+TGG - chr1_3:64482335-64482354 Msa0133190:intron 25.0%
! AAAACAGGCTAGATTTATAA+AGG + chr1_3:64482843-64482862 None:intergenic 25.0%
!! ATACAAACAAGTATGAGTTT+TGG + chr1_3:64483074-64483093 None:intergenic 25.0%
! TATCCAATTGAAAATAACTC+AGG - chr1_3:64483389-64483408 Msa0133190:intron 25.0%
!! TTGAATCAATCAGCTTTAAT+TGG - chr1_3:64483943-64483962 Msa0133190:five_prime_UTR 25.0%
!!! ACATTTTAGAGGATAGTAAA+AGG + chr1_3:64484011-64484030 None:intergenic 25.0%
!! AATCAACATGAACATTTTAG+AGG + chr1_3:64484022-64484041 None:intergenic 25.0%
! GATTCCTCTATGTTATAATT+AGG - chr1_3:64484038-64484057 Msa0133190:five_prime_UTR 25.0%
! ATTGCCTAATTATAACATAG+AGG + chr1_3:64484045-64484064 None:intergenic 25.0%
! ATATACATTAATCCATGTAC+AGG + chr1_3:64484163-64484182 None:intergenic 25.0%
! GTTTATATGTTCATATTGAG+TGG - chr1_3:64484202-64484221 Msa0133190:five_prime_UTR 25.0%
TTACTGTGCTTAATATGTAG+TGG + chr1_3:64478288-64478307 None:intergenic 30.0%
! TTTTCTTTTGTGAAAGCAAG+TGG - chr1_3:64478419-64478438 Msa0133190:three_prime_UTR 30.0%
! TTTCTTTTGTGAAAGCAAGT+GGG - chr1_3:64478420-64478439 Msa0133190:three_prime_UTR 30.0%
ATGGAATATAAGATATGTGG+AGG + chr1_3:64478499-64478518 None:intergenic 30.0%
ATTGTGATCCTAAGCAATAA+TGG + chr1_3:64478518-64478537 None:intergenic 30.0%
CAATCACCATATATACATAG+TGG - chr1_3:64478796-64478815 Msa0133190:intron 30.0%
AAGACACCACTATGTATATA+TGG + chr1_3:64478805-64478824 None:intergenic 30.0%
CTAAGATCTACAAAAAGATC+TGG - chr1_3:64479006-64479025 Msa0133190:intron 30.0%
!!! TTGAACTTGTTTTGTAGCAT+GGG + chr1_3:64479035-64479054 None:intergenic 30.0%
!!! ATTGAACTTGTTTTGTAGCA+TGG + chr1_3:64479036-64479055 None:intergenic 30.0%
TTCAATTCTACATACTTCAG+AGG - chr1_3:64479050-64479069 Msa0133190:intron 30.0%
TCAATTCTACATACTTCAGA+GGG - chr1_3:64479051-64479070 Msa0133190:intron 30.0%
ATAGCTGAAACAATTCCAAT+TGG + chr1_3:64479475-64479494 None:intergenic 30.0%
AATTGGAATTGTTTCAGCTA+TGG - chr1_3:64479474-64479493 Msa0133190:CDS 30.0%
! TTTGGCATTTTTGTTCTTTC+CGG - chr1_3:64479790-64479809 Msa0133190:intron 30.0%
!!! TTTTTTTCTGCTCATTCCAT+TGG - chr1_3:64479904-64479923 Msa0133190:intron 30.0%
ATATACCTACCTCAATCATT+TGG + chr1_3:64479957-64479976 None:intergenic 30.0%
! TAGGTACTCTATTTAGGATA+AGG - chr1_3:64480056-64480075 Msa0133190:intron 30.0%
TTCCTTGCCACATATATTAT+GGG + chr1_3:64480104-64480123 None:intergenic 30.0%
ATTCCTTGCCACATATATTA+TGG + chr1_3:64480105-64480124 None:intergenic 30.0%
ATCTATTGTCTCTTTCTGTT+TGG - chr1_3:64480123-64480142 Msa0133190:intron 30.0%
AATATATTCTCTCCTTCATC+TGG - chr1_3:64480146-64480165 Msa0133190:intron 30.0%
AACCTTGAAAAGTTGTGAAA+TGG + chr1_3:64480279-64480298 None:intergenic 30.0%
TACAAAGTCAAACTTCTAGA+AGG - chr1_3:64480802-64480821 Msa0133190:intron 30.0%
!! GAAAATGTTATGGCCTTATT+TGG + chr1_3:64480880-64480899 None:intergenic 30.0%
! ACATAGTTTTCAAAAACGAC+TGG + chr1_3:64481037-64481056 None:intergenic 30.0%
TGTAGATATATATGCATGAC+TGG + chr1_3:64481065-64481084 None:intergenic 30.0%
ACATATGTATCAAATGTAGC+TGG - chr1_3:64481121-64481140 Msa0133190:CDS 30.0%
AGATATAGAGAATGTAGAGA+TGG + chr1_3:64481237-64481256 None:intergenic 30.0%
! GATTTTCTTACTAGGATTCT+TGG + chr1_3:64481422-64481441 None:intergenic 30.0%
AGTAAAACTTGGTTAGGTAA+CGG + chr1_3:64481651-64481670 None:intergenic 30.0%
TTGGTTTAATTCCTAACTTC+AGG - chr1_3:64481689-64481708 Msa0133190:intron 30.0%
AACTAGAAGTCACTGTAAAA+GGG + chr1_3:64481781-64481800 None:intergenic 30.0%
! AGTGACTTCTAGTTGTAATA+TGG - chr1_3:64481787-64481806 Msa0133190:intron 30.0%
! GAGTATTGCCATAAAAAATG+TGG - chr1_3:64481823-64481842 Msa0133190:intron 30.0%
ACACTTAACCCTCAATATAA+AGG + chr1_3:64482318-64482337 None:intergenic 30.0%
AAAACAACCTAGATTTAACG+AGG + chr1_3:64482405-64482424 None:intergenic 30.0%
! TCACGGATTATAGATATGAA+GGG + chr1_3:64482576-64482595 None:intergenic 30.0%
! ATCACGGATTATAGATATGA+AGG + chr1_3:64482577-64482596 None:intergenic 30.0%
! ATACAAACAAGTAGGAGTTT+TGG + chr1_3:64482636-64482655 None:intergenic 30.0%
ATAAGGATAAATTACGGTTG+CGG - chr1_3:64482729-64482748 Msa0133190:CDS 30.0%
! GGACTGCAATTTAAAACTAT+TGG - chr1_3:64482750-64482769 Msa0133190:CDS 30.0%
! CAATTTAAAACTATTGGAGC+AGG - chr1_3:64482756-64482775 Msa0133190:intron 30.0%
!! CATCATTCTATCTCTAAAAC+AGG - chr1_3:64482946-64482965 Msa0133190:CDS 30.0%
TCTCGGATTATAGATATGAA+GGG + chr1_3:64483014-64483033 None:intergenic 30.0%
ATCTCGGATTATAGATATGA+AGG + chr1_3:64483015-64483034 None:intergenic 30.0%
TGTTTATTAGCATCTCTTGA+AGG + chr1_3:64483218-64483237 None:intergenic 30.0%
! ATCATGTTTCTCCTCTTTTT+AGG - chr1_3:64483344-64483363 Msa0133190:intron 30.0%
GAGTAACAATTCCTAAAAAG+AGG + chr1_3:64483358-64483377 None:intergenic 30.0%
!! TCACCTGAGTTATTTTCAAT+TGG + chr1_3:64483395-64483414 None:intergenic 30.0%
!!! GTTCTAGTGTTGTTTTTCTT+TGG - chr1_3:64483480-64483499 Msa0133190:CDS 30.0%
! CAAGCTACAAATGTACATTT+TGG - chr1_3:64483635-64483654 Msa0133190:five_prime_UTR 30.0%
TGTATCTTGTATCAATGAGA+TGG - chr1_3:64483778-64483797 Msa0133190:five_prime_UTR 30.0%
!! ACTTCATGTCTCATTTTTCT+TGG + chr1_3:64483882-64483901 None:intergenic 30.0%
! ATAGGGTGTAGCAAATCTTT+TGG - chr1_3:64478335-64478354 Msa0133190:three_prime_UTR 35.0%
! TTCTTTTGTGAAAGCAAGTG+GGG - chr1_3:64478421-64478440 Msa0133190:three_prime_UTR 35.0%
! AAGACTTCTGTTGGTTACAA+TGG + chr1_3:64478462-64478481 None:intergenic 35.0%
AAAAGAGTGAAGACTTCTGT+TGG + chr1_3:64478471-64478490 None:intergenic 35.0%
GTCTAATTACTCGGTATAGT+TGG + chr1_3:64478728-64478747 None:intergenic 35.0%
GTGTCTCAAGTCTAATTACT+CGG + chr1_3:64478737-64478756 None:intergenic 35.0%
TGCATCGTGTAGAATATGAA+AGG + chr1_3:64478846-64478865 None:intergenic 35.0%
ACATTCCCTATGATGTTCAT+TGG - chr1_3:64479200-64479219 Msa0133190:CDS 35.0%
GAATTAACTAACCTTCTGGA+AGG + chr1_3:64479281-64479300 None:intergenic 35.0%
! TCAAGTAATTAAGGCTAGCT+AGG + chr1_3:64479317-64479336 None:intergenic 35.0%
GGTGTGTAAGTAATTGGAAA+GGG + chr1_3:64479542-64479561 None:intergenic 35.0%
CTTTCCAATTACTTACACAC+CGG - chr1_3:64479541-64479560 Msa0133190:intron 35.0%
!! TCTTTGAGACTTGCTTACAT+AGG - chr1_3:64479758-64479777 Msa0133190:intron 35.0%
ATAGAAGACATTCTTGTGAC+CGG + chr1_3:64479812-64479831 None:intergenic 35.0%
CAAGCATCAAGTATCATATC+TGG - chr1_3:64479861-64479880 Msa0133190:intron 35.0%
ATCAAGTATCATATCTGGCT+TGG - chr1_3:64479866-64479885 Msa0133190:intron 35.0%
ATCCCATAATATATGTGGCA+AGG - chr1_3:64480099-64480118 Msa0133190:intron 35.0%
! GACCATTTCACAACTTTTCA+AGG - chr1_3:64480274-64480293 Msa0133190:intron 35.0%
TAACAAGCATTCCACGAATA+AGG - chr1_3:64481179-64481198 Msa0133190:CDS 35.0%
!! TACATTTTACGCCTTATTCG+TGG + chr1_3:64481193-64481212 None:intergenic 35.0%
TTATTCTATGCCATACATGC+TGG - chr1_3:64481256-64481275 Msa0133190:CDS 35.0%
! ATCTAAGGTGTCTATCAATG+AGG + chr1_3:64481324-64481343 None:intergenic 35.0%
TTTATGAACACCAAGCTTGT+GGG + chr1_3:64481728-64481747 None:intergenic 35.0%
ATTTATGAACACCAAGCTTG+TGG + chr1_3:64481729-64481748 None:intergenic 35.0%
GGTGTTCATAAATGTTCCAA+AGG - chr1_3:64481736-64481755 Msa0133190:intron 35.0%
CAACTAGAAGTCACTGTAAA+AGG + chr1_3:64481782-64481801 None:intergenic 35.0%
!! CACAATTTCTGAGGTTAGTT+TGG - chr1_3:64481939-64481958 Msa0133190:intron 35.0%
! CACATGTTTTCCATCTACAA+GGG - chr1_3:64482139-64482158 Msa0133190:intron 35.0%
GAAATCGAGACCTTACTTAA+GGG - chr1_3:64482164-64482183 Msa0133190:intron 35.0%
GCTGCAAACCTTTATATTGA+GGG - chr1_3:64482307-64482326 Msa0133190:intron 35.0%
!! AGCTTTGAATTACGAGATCA+CGG + chr1_3:64482593-64482612 None:intergenic 35.0%
TGCTGCAAACATTTATACTG+TGG - chr1_3:64482702-64482721 Msa0133190:CDS 35.0%
! TTTAAAACTATTGGAGCAGG+CGG - chr1_3:64482759-64482778 Msa0133190:intron 35.0%
GACAATGTGATTACATTCCT+AGG + chr1_3:64482817-64482836 None:intergenic 35.0%
CAGGCTAGATTTATAAAGGT+CGG + chr1_3:64482839-64482858 None:intergenic 35.0%
!! GGCTTTGAAATATGAGATCT+CGG + chr1_3:64483031-64483050 None:intergenic 35.0%
!! CAAACAAGTATGAGTTTTGG+AGG + chr1_3:64483071-64483090 None:intergenic 35.0%
GCATAAGATCTAACATGGTT+AGG + chr1_3:64483115-64483134 None:intergenic 35.0%
! AGGAAGCATAAGATCTAACA+TGG + chr1_3:64483120-64483139 None:intergenic 35.0%
CAAGCCATAACCAGTTATTT+GGG + chr1_3:64483301-64483320 None:intergenic 35.0%
ACTCAGGTGAAGTTTATAAC+TGG - chr1_3:64483405-64483424 Msa0133190:intron 35.0%
AAGTTTATAACTGGACCTAC+AGG - chr1_3:64483414-64483433 Msa0133190:intron 35.0%
AGTTTATAACTGGACCTACA+GGG - chr1_3:64483415-64483434 Msa0133190:intron 35.0%
! TTGTAGCTTGCACTAAAGAT+GGG + chr1_3:64483625-64483644 None:intergenic 35.0%
! TTTGTAGCTTGCACTAAAGA+TGG + chr1_3:64483626-64483645 None:intergenic 35.0%
GAAATTCTGTTTGAGTGTGA+AGG - chr1_3:64483828-64483847 Msa0133190:five_prime_UTR 35.0%
! TAGAATTTGTGCTTCTGGTT+TGG - chr1_3:64483905-64483924 Msa0133190:five_prime_UTR 35.0%
GTTAGAAACGTGCAGCATAT+TGG - chr1_3:64478312-64478331 Msa0133190:three_prime_UTR 40.0%
AAACGTGCAGCATATTGGAT+AGG - chr1_3:64478317-64478336 Msa0133190:three_prime_UTR 40.0%
AACGTGCAGCATATTGGATA+GGG - chr1_3:64478318-64478337 Msa0133190:three_prime_UTR 40.0%
! GCTGTGAGCATATTTTATGC+AGG - chr1_3:64478635-64478654 Msa0133190:CDS 40.0%
TTCTTGTGATGTTTCTTGGG+TGG - chr1_3:64478958-64478977 Msa0133190:intron 40.0%
TCATAGGGAATGTGAAAAGC+AGG + chr1_3:64479193-64479212 None:intergenic 40.0%
GAGCTCCAATGAACATCATA+GGG + chr1_3:64479208-64479227 None:intergenic 40.0%
AGAGCTCCAATGAACATCAT+AGG + chr1_3:64479209-64479228 None:intergenic 40.0%
!!! ATATGTTTTGGTTCCAGCAG+TGG - chr1_3:64479397-64479416 Msa0133190:CDS 40.0%
ATTGGAGACATAACCAGGAA+TGG + chr1_3:64479457-64479476 None:intergenic 40.0%
TTCCTGGTTATGTCTCCAAT+TGG - chr1_3:64479457-64479476 Msa0133190:CDS 40.0%
TTCCAATTGGAGACATAACC+AGG + chr1_3:64479462-64479481 None:intergenic 40.0%
! TGTTTGCTGCACTCTTGATA+TGG - chr1_3:64479515-64479534 Msa0133190:CDS 40.0%
CGGTGTGTAAGTAATTGGAA+AGG + chr1_3:64479543-64479562 None:intergenic 40.0%
GAAACCGGTGTGTAAGTAAT+TGG + chr1_3:64479548-64479567 None:intergenic 40.0%
! TCTCATCTTGTTTGTGCATG+CGG + chr1_3:64479579-64479598 None:intergenic 40.0%
TTAGATGGGAAGCAAAGTTG+AGG - chr1_3:64479729-64479748 Msa0133190:intron 40.0%
TCTTCTATTCTGCCTCTTGT+TGG - chr1_3:64479824-64479843 Msa0133190:intron 40.0%
!! CTGGCTTGGACATTTATCTA+TGG - chr1_3:64479880-64479899 Msa0133190:intron 40.0%
!! CTCAATCATTTGGTTGGTGA+TGG + chr1_3:64479947-64479966 None:intergenic 40.0%
CATCACCAACCAAATGATTG+AGG - chr1_3:64479945-64479964 Msa0133190:intron 40.0%
ACCAACCAAATGATTGAGGT+AGG - chr1_3:64479949-64479968 Msa0133190:intron 40.0%
ACCTACCTCAATCATTTGGT+TGG + chr1_3:64479953-64479972 None:intergenic 40.0%
! CATTATTGGTGTCCAGATGA+AGG + chr1_3:64480161-64480180 None:intergenic 40.0%
TGATTTCTCAGATGCTAGAG+TGG - chr1_3:64481092-64481111 Msa0133190:intron 40.0%
GTTTAATAGCGTTAGCCATG+TGG - chr1_3:64481155-64481174 Msa0133190:CDS 40.0%
!! TGGAATGCTTGTTATCCACA+TGG + chr1_3:64481173-64481192 None:intergenic 40.0%
ATGAGGAATAGGAAAATCCC+AGG + chr1_3:64481307-64481326 None:intergenic 40.0%
GGTGTCTATCAATGAGGAAT+AGG + chr1_3:64481318-64481337 None:intergenic 40.0%
GGCGAGATTGTAAGAATCTA+AGG + chr1_3:64481339-64481358 None:intergenic 40.0%
ATACTATAACCCCACAAGCT+TGG - chr1_3:64481715-64481734 Msa0133190:intron 40.0%
TTATGAACACCAAGCTTGTG+GGG + chr1_3:64481727-64481746 None:intergenic 40.0%
GGAACTTTCTTCTTCGACTT+TGG - chr1_3:64481871-64481890 Msa0133190:intron 40.0%
ATTTCAGTTGAAGGACCCTA+CGG - chr1_3:64481905-64481924 Msa0133190:intron 40.0%
CTCAGAAATTGTGCAGTATG+GGG + chr1_3:64481932-64481951 None:intergenic 40.0%
CCTCAGAAATTGTGCAGTAT+GGG + chr1_3:64481933-64481952 None:intergenic 40.0%
ACCTCAGAAATTGTGCAGTA+TGG + chr1_3:64481934-64481953 None:intergenic 40.0%
GTAGATGGAAAACATGTGGT+CGG + chr1_3:64482137-64482156 None:intergenic 40.0%
CCTTGTAGATGGAAAACATG+TGG + chr1_3:64482141-64482160 None:intergenic 40.0%
! CCACATGTTTTCCATCTACA+AGG - chr1_3:64482138-64482157 Msa0133190:intron 40.0%
CGAAATCGAGACCTTACTTA+AGG - chr1_3:64482163-64482182 Msa0133190:intron 40.0%
CGCTGCAAACCTTTATATTG+AGG - chr1_3:64482306-64482325 Msa0133190:intron 40.0%
TGTCAGACCTCGTTAAATCT+AGG - chr1_3:64482395-64482414 Msa0133190:intron 40.0%
TCATCGTTGTGTCTCTAAAC+AGG - chr1_3:64482508-64482527 Msa0133190:intron 40.0%
!! CAAACAAGTAGGAGTTTTGG+AGG + chr1_3:64482633-64482652 None:intergenic 40.0%
CTCGGTCTTTCTTCAGATTT+CGG - chr1_3:64482877-64482896 Msa0133190:intron 40.0%
! GAGGTTGGAATTCTTGTTGT+TGG + chr1_3:64483052-64483071 None:intergenic 40.0%
!!! CAAGTATGAGTTTTGGAGGT+TGG + chr1_3:64483067-64483086 None:intergenic 40.0%
GATCTTATGCTTCCTGTTTC+TGG - chr1_3:64483125-64483144 Msa0133190:intron 40.0%
TCTCCTATCTCAGGTGTATT+AGG - chr1_3:64483275-64483294 Msa0133190:CDS 40.0%
GTGTATTAGGCCCAAATAAC+TGG - chr1_3:64483288-64483307 Msa0133190:CDS 40.0%
TAGGCCCAAATAACTGGTTA+TGG - chr1_3:64483294-64483313 Msa0133190:CDS 40.0%
CCAAGCCATAACCAGTTATT+TGG + chr1_3:64483302-64483321 None:intergenic 40.0%
CCAAATAACTGGTTATGGCT+TGG - chr1_3:64483299-64483318 Msa0133190:CDS 40.0%
TTACCAGGGTCATGGATTTA+TGG - chr1_3:64483569-64483588 Msa0133190:CDS 40.0%
GATGTTGGAGTTATGACTTG+TGG - chr1_3:64483855-64483874 Msa0133190:five_prime_UTR 40.0%
GTTGCTAGAATTTGTGCTTC+TGG - chr1_3:64483900-64483919 Msa0133190:five_prime_UTR 40.0%
GATAAGGTCCCCTGTTGTTA+CGG - chr1_3:64478601-64478620 Msa0133190:CDS 45.0%
TACCATAGGCCGTAACAACA+GGG + chr1_3:64478613-64478632 None:intergenic 45.0%
ATACCATAGGCCGTAACAAC+AGG + chr1_3:64478614-64478633 None:intergenic 45.0%
TGTTGTTACGGCCTATGGTA+TGG - chr1_3:64478613-64478632 Msa0133190:CDS 45.0%
TATGCTCACAGCCATACCAT+AGG + chr1_3:64478627-64478646 None:intergenic 45.0%
! ACTCGGTATAGTTGGTCTCA+CGG + chr1_3:64478720-64478739 None:intergenic 45.0%
TTCTTGGGTGGCTATCTGTT+TGG - chr1_3:64478970-64478989 Msa0133190:intron 45.0%
TCTACATACTTCAGAGGGCA+AGG - chr1_3:64479056-64479075 Msa0133190:intron 45.0%
CAGAAAAGTTGCCTTCCAGA+AGG - chr1_3:64479267-64479286 Msa0133190:CDS 45.0%
!! GGCGCTCTAAAGAGATGTTT+AGG - chr1_3:64479418-64479437 Msa0133190:CDS 45.0%
TAACCAGGAATGGACGTCTA+AGG + chr1_3:64479447-64479466 None:intergenic 45.0%
TCAGATGTGAGTCCAACAAG+AGG + chr1_3:64479839-64479858 None:intergenic 45.0%
!! CAAGAGGTGTCAACTACAAG+TGG + chr1_3:64480319-64480338 None:intergenic 45.0%
AAAGGCGAGCTGATAGTAAC+CGG + chr1_3:64481369-64481388 None:intergenic 45.0%
!! CAAGGGCATCACAAGGTAAA+AGG + chr1_3:64481387-64481406 None:intergenic 45.0%
CTTGGAGAAGTTGAGCTCAA+GGG + chr1_3:64481404-64481423 None:intergenic 45.0%
TCTTGGAGAAGTTGAGCTCA+AGG + chr1_3:64481405-64481424 None:intergenic 45.0%
CATTGCAGCTTGGAAACCTT+TGG + chr1_3:64481755-64481774 None:intergenic 45.0%
CAAAGGTTTCCAAGCTGCAA+TGG - chr1_3:64481753-64481772 Msa0133190:intron 45.0%
!!! CCAGCTGCCCACATTTTTTA+TGG + chr1_3:64481834-64481853 None:intergenic 45.0%
CCATAAAAAATGTGGGCAGC+TGG - chr1_3:64481831-64481850 Msa0133190:intron 45.0%
CTGGTCAAACAAGCTGTATC+AGG - chr1_3:64481850-64481869 Msa0133190:intron 45.0%
CCCATACTGCACAATTTCTG+AGG - chr1_3:64481930-64481949 Msa0133190:intron 45.0%
CCCTTGCGGAGATTAGTAAT+CGG + chr1_3:64482079-64482098 None:intergenic 45.0%
CCGATTACTAATCTCCGCAA+GGG - chr1_3:64482076-64482095 Msa0133190:intron 45.0%
ATCTGGCTGTCTACCTTTAG+TGG - chr1_3:64482100-64482119 Msa0133190:intron 45.0%
TCTGGCTGTCTACCTTTAGT+GGG - chr1_3:64482101-64482120 Msa0133190:intron 45.0%
TCGATTTCGACCCTTGTAGA+TGG + chr1_3:64482152-64482171 None:intergenic 45.0%
GAGACCTTACTTAAGGGACT+CGG - chr1_3:64482170-64482189 Msa0133190:intron 45.0%
GACTCGGACCAATGTAATGT+TGG - chr1_3:64482186-64482205 Msa0133190:intron 45.0%
TTATGTTGTGGCCGCAATTG+CGG - chr1_3:64482347-64482366 Msa0133190:intron 45.0%
CAGGCATGAACAGATTGTGA+TGG - chr1_3:64482527-64482546 Msa0133190:intron 45.0%
! GAACAGATTGTGATGGTGAG+TGG - chr1_3:64482534-64482553 Msa0133190:intron 45.0%
GACGTTCATAGTTAAACCGC+TGG - chr1_3:64482670-64482689 Msa0133190:CDS 45.0%
TGCAGCATAAACAGAACCAG+CGG + chr1_3:64482689-64482708 None:intergenic 45.0%
TTACATTCCTAGGAGCAGAG+CGG + chr1_3:64482807-64482826 None:intergenic 45.0%
CTGAGATAGGAGAATCTGAG+AGG + chr1_3:64483268-64483287 None:intergenic 45.0%
CTCTCAGATTCTCCTATCTC+AGG - chr1_3:64483266-64483285 Msa0133190:CDS 45.0%
CATGTACCACATAACCCTGT+AGG + chr1_3:64483432-64483451 None:intergenic 45.0%
CAACGCCAGAAAGATTACCA+GGG - chr1_3:64483555-64483574 Msa0133190:CDS 45.0%
CATGACCCTGGTAATCTTTC+TGG + chr1_3:64483563-64483582 None:intergenic 45.0%
CAGAAAGATTACCAGGGTCA+TGG - chr1_3:64483561-64483580 Msa0133190:CDS 45.0%
GAACCATAAATCCATGACCC+TGG + chr1_3:64483575-64483594 None:intergenic 45.0%
CCTCACTTACTCTTGAGATC+AGG + chr1_3:64483668-64483687 None:intergenic 45.0%
CCTGATCTCAAGAGTAAGTG+AGG - chr1_3:64483665-64483684 Msa0133190:five_prime_UTR 45.0%
GAGTGTGAAGGCAAAGATGT+TGG - chr1_3:64483840-64483859 Msa0133190:five_prime_UTR 45.0%
TGCACATATGTGCCTGTACA+TGG - chr1_3:64484148-64484167 Msa0133190:five_prime_UTR 45.0%
ACCATAGGCCGTAACAACAG+GGG + chr1_3:64478612-64478631 None:intergenic 50.0%
CGGCTAACAGGATACAACAG+CGG + chr1_3:64478700-64478719 None:intergenic 50.0%
! TAGTTGGTCTCACGGCTAAC+AGG + chr1_3:64478712-64478731 None:intergenic 50.0%
CTTCCTTAGACGTCCATTCC+TGG - chr1_3:64479441-64479460 Msa0133190:CDS 50.0%
! CATCTTGTTTGTGCATGCGG+AGG + chr1_3:64479576-64479595 None:intergenic 50.0%
GGATGCAACTCCAGCATGTA+TGG + chr1_3:64481269-64481288 None:intergenic 50.0%
TCCATGTGCATGATTGCTCC+TGG - chr1_3:64481286-64481305 Msa0133190:CDS 50.0%
CCATGTGCATGATTGCTCCT+GGG - chr1_3:64481287-64481306 Msa0133190:CDS 50.0%
TACAATCTCGCCAACATGCC+CGG - chr1_3:64481347-64481366 Msa0133190:CDS 50.0%
CTGATAGTAACCGGGCATGT+TGG + chr1_3:64481360-64481379 None:intergenic 50.0%
AAGGCGAGCTGATAGTAACC+GGG + chr1_3:64481368-64481387 None:intergenic 50.0%
!! TTGAGCTCAAGGGCATCACA+AGG + chr1_3:64481394-64481413 None:intergenic 50.0%
!! AAAAGGGTGCCATTGCAGCT+TGG + chr1_3:64481765-64481784 None:intergenic 50.0%
GCCGATTACTAATCTCCGCA+AGG - chr1_3:64482075-64482094 Msa0133190:intron 50.0%
CTAATCTCCGCAAGGGAATC+TGG - chr1_3:64482083-64482102 Msa0133190:intron 50.0%
TAGACAGCCAGATTCCCTTG+CGG + chr1_3:64482093-64482112 None:intergenic 50.0%
CTGGCTGTCTACCTTTAGTG+GGG - chr1_3:64482102-64482121 Msa0133190:intron 50.0%
TGGTCCGAGTCCCTTAAGTA+AGG + chr1_3:64482177-64482196 None:intergenic 50.0%
! CAGATTGTGATGGTGAGTGG+TGG - chr1_3:64482537-64482556 Msa0133190:intron 50.0%
CAGGCATGAGCAGATTGTGA+TGG - chr1_3:64482965-64482984 Msa0133190:CDS 50.0%
! GAGCAGATTGTGATGGTGAG+TGG - chr1_3:64482972-64482991 Msa0133190:CDS 50.0%
! CAGATTGTGATGGTGAGTGG+CGG - chr1_3:64482537-64482556 Msa0133190:intron 50.0%
TGAGCTGTTGAGCCAGAAAC+AGG + chr1_3:64483140-64483159 None:intergenic 50.0%
GGGCCTAATACACCTGAGAT+AGG + chr1_3:64483281-64483300 None:intergenic 50.0%
ACTGGACCTACAGGGTTATG+TGG - chr1_3:64483423-64483442 Msa0133190:intron 50.0%
! CCTGGTAATCTTTCTGGCGT+TGG + chr1_3:64483557-64483576 None:intergenic 50.0%
CCAACGCCAGAAAGATTACC+AGG - chr1_3:64483554-64483573 Msa0133190:CDS 50.0%
GCACTAAAGATGGGCAAGGA+AGG + chr1_3:64483616-64483635 None:intergenic 50.0%
GCTTGCACTAAAGATGGGCA+AGG + chr1_3:64483620-64483639 None:intergenic 50.0%
TCCCCTGTTGTTACGGCCTA+TGG - chr1_3:64478608-64478627 Msa0133190:CDS 55.0%
!! TCTCTTTAGAGCGCCACTGC+TGG + chr1_3:64479413-64479432 None:intergenic 55.0%
CATGCGGAGGTGATCGAAAC+CGG + chr1_3:64479563-64479582 None:intergenic 55.0%
CCCAGGAGCAATCATGCACA+TGG + chr1_3:64481290-64481309 None:intergenic 55.0%
TGTGCAGTATGGGGTCCGTA+GGG + chr1_3:64481923-64481942 None:intergenic 55.0%
TTGTGCAGTATGGGGTCCGT+AGG + chr1_3:64481924-64481943 None:intergenic 55.0%
GGAAAACATGTGGTCGGACG+AGG + chr1_3:64482131-64482150 None:intergenic 55.0%
ACAGTCCGCAACCGCAATTG+CGG + chr1_3:64482361-64482380 None:intergenic 55.0%
! GTGATGGTGAGTGGTGGAAG+TGG - chr1_3:64482543-64482562 Msa0133190:intron 55.0%
GATAAGTCTGCAGCTGCGTG+CGG + chr1_3:64483750-64483769 None:intergenic 55.0%
GGACGAGGAGACCCCACTAA+AGG + chr1_3:64482116-64482135 None:intergenic 60.0%
TGTGGCCGCAATTGCGGTTG+CGG - chr1_3:64482353-64482372 Msa0133190:intron 60.0%
AACCTAGCCGCTCTGCTCCT+AGG - chr1_3:64482797-64482816 Msa0133190:intron 60.0%
TTCCTAGGAGCAGAGCGGCT+AGG + chr1_3:64482802-64482821 None:intergenic 60.0%
! GTGATGGTGAGTGGCGGAAG+TGG - chr1_3:64482981-64483000 Msa0133190:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 64478263 64484239 64478263 ID=Msa0133190;Name=Msa0133190
chr1_3 mRNA 64478263 64484239 64478263 ID=Msa0133190-mRNA-1;Parent=Msa0133190;Name=Msa0133190-mRNA-1;_AED=0.26;_eAED=0.27;_QI=643|0.28|0.37|1|1|1|8|271|605
chr1_3 exon 64478263 64478673 64478263 ID=Msa0133190-mRNA-1:exon:21693;Parent=Msa0133190-mRNA-1
chr1_3 exon 64479092 64479534 64479092 ID=Msa0133190-mRNA-1:exon:21692;Parent=Msa0133190-mRNA-1
chr1_3 exon 64480551 64480791 64480551 ID=Msa0133190-mRNA-1:exon:21691;Parent=Msa0133190-mRNA-1
chr1_3 exon 64481108 64481399 64481108 ID=Msa0133190-mRNA-1:exon:21690;Parent=Msa0133190-mRNA-1
chr1_3 exon 64482601 64482769 64482601 ID=Msa0133190-mRNA-1:exon:21689;Parent=Msa0133190-mRNA-1
chr1_3 exon 64482900 64483132 64482900 ID=Msa0133190-mRNA-1:exon:21688;Parent=Msa0133190-mRNA-1
chr1_3 exon 64483214 64483341 64483214 ID=Msa0133190-mRNA-1:exon:21687;Parent=Msa0133190-mRNA-1
chr1_3 exon 64483425 64484239 64483425 ID=Msa0133190-mRNA-1:exon:21686;Parent=Msa0133190-mRNA-1
chr1_3 five_prime_UTR 64483597 64484239 64483597 ID=Msa0133190-mRNA-1:five_prime_utr;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64483425 64483596 64483425 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64483214 64483341 64483214 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64482900 64483132 64482900 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64482601 64482769 64482601 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64481108 64481399 64481108 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64480551 64480791 64480551 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64479092 64479534 64479092 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 CDS 64478534 64478673 64478534 ID=Msa0133190-mRNA-1:cds;Parent=Msa0133190-mRNA-1
chr1_3 three_prime_UTR 64478263 64478533 64478263 ID=Msa0133190-mRNA-1:three_prime_utr;Parent=Msa0133190-mRNA-1
Gene Sequence

>Msa0133190

ATGTGCATTATGATGATGAAGAGACACACAATAATATTCCTAAGAATCATTTTTCTTGTGATGTTTCTTGGGTGGCTATCTGTTTGGATCTTGTTGCCTACTAAGATCTACAAAAAGATCTGGGCTCCCATGCTACAAAACAAGTTCAATTCTACATACTTCAGAGGGCAAGTAGTTCTTAACTTTTTTAGGGATAAATCTCCTGCTTTTCACATTCCCTATGATGTTCATTGGAGCTCTGAGTTGTATTTATCTCCATTTTCATCAAGAAAAAATAACAGAAAAGTTGCCTTCCAGAAGTTTCCCTTTAGAAGTCATAGATATAGTATATGTTTTGGTTCCAGCAGTGGCGCTCTAAAGAGATGTTTAGGCTTCCTTAGACGTCCATTCCTGGTTATGTCTCCAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGTACTCATGTTTGCTGCACTCTTGATATGGTCCCTTTCCAATTACTTACACACCGGTTTCGATCACCTCCGCATGCACAAACAAGATGAGAAAATATGGGAAGCAAAGTTGAGGAGTGTATCTTTGAGACTTGCTTACATAGGAAATATATGTTTGGCATTTTTGTTCTTTCCGGTCACAAGAATGTCTTCTATTCTGCCTCTTGTTGGACTCACATCTGAGTCAAGCATCAAGTATCATATCTGGCTTGGACATTTATCTATGATGCTAGAGTGGAGCAAGACATATGTATCAAATGTAGCTGGAGAGATTGCAAGTTTAATAGCGTTAGCCATGTGGATAACAAGCATTCCACGAATAAGGCGTAAAATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCCATACATGCTGGAGTTGCATCCATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCCCGGTTACTATCAGCTCGCCTTTTACCTTGTTTATACTATAACCCCACAAGCTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGTTGTAATATGGAGACTAACTATCTGAGTATTGCCATAAAAAATGTGGGCAGCTGGTCAAACAAGCTGTATCAGGAACTTTCTTCTTCGACTTTGGATCATCTTAATATTTCAGTTGAAGGACCCTACGGACCCCATACTGCACAATTTCTGAGGCATGAGCAGATTGTGATGGTGAGTGGCGGAAGTGGCGTAACTCCCTTCATATCTATAATCCGAGATCTCATATTTCAAAGCCAACAACAAGAATTCCAACCTCCAAAACTCATACTTGTTTGTATTTTCAAAAGCTATGCTGACCTAACCATGTTAGATCTTATGCTTCCTGTTTCTGGCTCAACAGCTCAAATCTCACAGCTTCAGTTACAAATTGAAGCTTACATCACAAGAGAAAAAGAACAACCTTCAAGAGATGCTAATAAACAAATCAAAACTATATGGTTTAAAACAAACCTCTCAGATTCTCCTATCTCAGGTGTATTAGGCCCAAATAACTGGTTATGGCTTGGTGCTATAATCACATCATCGTTCATCATGTTTCTCCTCTTTTTAGGAATTGTTACTCGTTACTATATTTATCCAATTGAAAATAACTCAGAAATTCTGTTTGAGTGTGAAGGCAAAGATGTTGGAGTTATGACTTGTGGTCCAAGAAAAATGAGACATGAAGTTGCTAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAATCAATCAGCTTTAATTGGTGA
Protein sequence

>Msa0133190

MCIMMMKRHTIIFLRIIFLVMFLGWLSVWILLPTKIYKKIWAPMLQNKFNSTYFRGQVVLNFFRDKSPAFHIPYDVHWSSELYLSPFSSRKNNRKVAFQKFPFRSHRYSICFGSSSGALKRCLGFLRRPFLVMSPIGIVSAMELIFVLMFAALLIWSLSNYLHTGFDHLRMHKQDEKIWEAKLRSVSLRLAYIGNICLAFLFFPVTRMSSILPLVGLTSESSIKYHIWLGHLSMMLEWSKTYVSNVAGEIASLIALAMWITSIPRIRRKMYEVFFYTHHLYILYILFYAIHAGVASMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARLLPCLYYNPTSLVFINVPKVSKLQWHPFTVTSSCNMETNYLSIAIKNVGSWSNKLYQELSSSTLDHLNISVEGPYGPHTAQFLRHEQIVMVSGGSGVTPFISIIRDLIFQSQQQEFQPPKLILVCIFKSYADLTMLDLMLPVSGSTAQISQLQLQIEAYITREKEQPSRDANKQIKTIWFKTNLSDSPISGVLGPNNWLWLGAIITSSFIMFLLFLGIVTRYYIYPIENNSEILFECEGKDVGVMTCGPRKMRHEVARICASGLADNLHFESISFNW*