AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0086380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086380 MtrunA17_Chr1g0202731 81.788 593 53 6 1 559 1 572 0.0 944
Msa0086380 MtrunA17_Chr1g0202731 97.826 46 1 0 560 605 662 707 3.15e-23 104
Msa0086380 MtrunA17_Chr1g0202741 74.124 599 98 7 4 568 1 576 0.0 848
Msa0086380 MtrunA17_Chr1g0202741 86.957 46 6 0 560 605 657 702 2.14e-20 95.5
Msa0086380 MtrunA17_Chr8g0348531 47.834 577 233 9 28 563 36 585 1.22e-166 492
Msa0086380 MtrunA17_Chr8g0348531 63.043 46 17 0 560 605 671 716 1.59e-12 70.5
Msa0086380 MtrunA17_Chr8g0348521 46.823 598 251 11 6 563 1 571 8.42e-163 481
Msa0086380 MtrunA17_Chr8g0348521 63.043 46 17 0 560 605 656 701 2.50e-12 70.1
Msa0086380 MtrunA17_Chr8g0349071 53.443 305 126 4 235 525 1 303 5.31e-101 309
Msa0086380 MtrunA17_Chr2g0291481 33.473 478 263 8 129 555 128 601 6.15e-79 264
Msa0086380 MtrunA17_Chr4g0058571 29.833 600 338 15 11 561 23 588 2.79e-73 249
Msa0086380 MtrunA17_Chr4g0061441 25.000 348 199 14 194 483 388 731 8.62e-19 90.9
Msa0086380 MtrunA17_Chr2g0301511 28.889 225 114 10 264 445 541 762 1.22e-16 84.0
Msa0086380 MtrunA17_Chr3g0131361 24.889 225 117 6 271 445 522 744 2.48e-15 79.7
Msa0086380 MtrunA17_Chr8g0385411 25.000 232 123 7 261 443 508 737 3.94e-15 79.0
Msa0086380 MtrunA17_Chr8g0387591 25.346 217 113 7 264 436 552 763 2.80e-14 76.3
Msa0086380 MtrunA17_Chr8g0349081 62.222 45 17 0 561 605 77 121 4.01e-14 69.3
Msa0086380 MtrunA17_Chr1g0192121 22.707 229 128 7 262 443 500 726 5.55e-14 75.5
Msa0086380 MtrunA17_Chr3g0131381 24.034 233 129 5 264 450 527 757 6.26e-14 75.5
Msa0086380 MtrunA17_Chr3g0131401 23.529 221 118 7 271 443 541 758 1.58e-13 73.9
Msa0086380 MtrunA17_Chr7g0272591 23.963 217 119 6 271 443 524 738 1.68e-13 73.9
Msa0086380 MtrunA17_Chr7g0238371 25.974 231 110 9 271 443 469 696 1.20e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086380 AT5G23980.1 48.915 599 240 11 14 576 8 576 0.0 548
Msa0086380 AT5G23980.1 76.000 50 11 1 557 605 650 699 3.45e-17 85.9
Msa0086380 AT5G23990.2 48.414 599 243 10 14 576 8 576 0.0 548
Msa0086380 AT5G23990.2 44.444 117 54 4 490 605 593 699 2.97e-19 92.4
Msa0086380 AT1G01580.1 45.378 595 263 8 15 570 28 599 2.57e-173 509
Msa0086380 AT1G01580.1 63.265 49 18 0 557 605 677 725 3.20e-14 76.6
Msa0086380 AT1G01580.2 45.210 595 264 8 15 570 106 677 2.99e-172 509
Msa0086380 AT1G01580.2 63.265 49 18 0 557 605 755 803 3.42e-14 76.6
Msa0086380 AT1G01590.1 43.624 596 262 8 14 560 15 585 2.94e-170 501
Msa0086380 AT1G01590.1 55.102 49 22 0 557 605 656 704 9.44e-12 68.6
Msa0086380 AT5G23990.3 53.881 438 166 4 174 576 8 444 6.51e-162 475
Msa0086380 AT5G23990.3 44.444 117 54 4 490 605 461 567 2.93e-19 92.0
Msa0086380 AT1G23020.6 42.954 589 266 9 14 560 15 575 2.34e-159 473
Msa0086380 AT1G23020.6 61.224 49 19 0 557 605 646 694 2.38e-12 70.5
Msa0086380 AT1G23020.2 42.954 589 266 9 14 560 38 598 2.80e-159 473
Msa0086380 AT1G23020.2 61.224 49 19 0 557 605 669 717 2.35e-12 70.5
Msa0086380 AT5G23990.1 54.292 431 161 4 181 576 105 534 1.49e-158 469
Msa0086380 AT5G23990.1 44.444 117 54 4 490 605 551 657 4.98e-19 91.7
Msa0086380 AT1G23020.4 42.784 589 266 10 14 560 15 574 6.38e-157 466
Msa0086380 AT1G23020.4 61.224 49 19 0 557 605 645 693 2.44e-12 70.5
Msa0086380 AT1G23020.3 42.784 589 266 10 14 560 15 574 6.38e-157 466
Msa0086380 AT1G23020.3 61.224 49 19 0 557 605 645 693 2.44e-12 70.5
Msa0086380 AT1G23020.1 42.784 589 266 10 14 560 38 597 7.35e-157 467
Msa0086380 AT1G23020.1 61.224 49 19 0 557 605 668 716 2.41e-12 70.5
Msa0086380 AT1G23020.5 42.784 589 266 10 14 560 38 597 7.35e-157 467
Msa0086380 AT1G23020.5 61.224 49 19 0 557 605 668 716 2.41e-12 70.5
Msa0086380 AT1G23020.7 42.275 589 266 8 14 560 15 571 1.15e-156 466
Msa0086380 AT1G23020.7 61.224 49 19 0 557 605 642 690 2.33e-12 70.5
Msa0086380 AT5G50160.1 31.207 580 314 17 23 552 19 563 5.83e-79 265
Msa0086380 AT5G49740.3 31.120 482 268 9 129 552 125 600 1.45e-72 247
Msa0086380 AT5G49740.1 31.120 482 268 9 129 552 125 600 2.98e-72 247
Msa0086380 AT5G49730.2 33.253 415 227 5 129 493 116 530 6.48e-71 238
Msa0086380 AT5G49730.1 31.303 476 275 6 129 552 116 591 1.01e-70 243
Msa0086380 AT5G49740.2 32.134 417 229 6 129 493 125 539 1.86e-70 237
Msa0086380 AT5G50160.2 33.505 388 202 10 214 552 4 384 2.05e-65 224
Msa0086380 AT4G25090.2 27.143 210 114 8 271 443 472 679 8.35e-17 84.7
Msa0086380 AT4G25090.1 27.143 210 114 8 271 443 484 691 8.80e-17 84.7
Msa0086380 AT1G19230.1 23.767 223 125 6 264 443 536 756 2.81e-16 83.2
Msa0086380 AT1G19230.2 23.767 223 125 6 264 443 562 782 3.64e-16 82.8
Msa0086380 AT4G11230.1 26.380 326 163 15 260 527 539 845 7.16e-16 82.0
Msa0086380 AT1G64060.1 28.704 216 107 8 264 436 558 769 8.31e-16 81.6
Msa0086380 AT1G09090.2 24.561 228 124 8 261 442 465 690 9.78e-15 78.2
Msa0086380 AT5G51060.1 25.229 218 115 7 271 443 531 745 1.61e-13 74.3
Msa0086380 AT5G47910.1 24.545 220 118 7 262 436 543 759 1.80e-13 74.3
Msa0086380 AT5G07390.1 25.000 212 110 7 271 436 522 730 7.10e-13 72.4
Msa0086380 AT5G07390.2 25.000 212 110 7 271 436 490 698 9.77e-13 72.0

Find 151 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTATGCTTCCTGTTTC+TGG 0.029479 1_2:-67125782 Msa0086380:CDS
CCAAGCCATAACCAGTTATT+TGG 0.139470 1_2:+67125608 None:intergenic
CAACTAGAAGTCACTGTAAA+AGG 0.162417 1_2:+67127128 None:intergenic
ACAAATATTACTATTATTAT+TGG 0.185605 1_2:+67130149 None:intergenic
TTGAATCAATCAGCTTTAAT+TGG 0.229288 1_2:-67124964 Msa0086380:CDS
ACCTCAGAAATTGTGCAGTA+TGG 0.265531 1_2:+67126976 None:intergenic
AGTGACTTCTAGTTGTAATA+TGG 0.269203 1_2:-67127120 Msa0086380:CDS
GAAACCGGTGTGTAAGTAAT+TGG 0.280750 1_2:+67129362 None:intergenic
TCTCCTATCTCAGGTGTATT+AGG 0.286507 1_2:-67125632 Msa0086380:CDS
GATTCCTCTATGTTATAATT+AGG 0.290296 1_2:-67124869 Msa0086380:three_prime_UTR
CTGGCTTGGACATTTATCTA+TGG 0.290976 1_2:-67129027 Msa0086380:intron
GTTGCTAGAATTTGTGCTTC+TGG 0.309657 1_2:-67125007 Msa0086380:CDS
GGAACTTTCTTCTTCGACTT+TGG 0.313524 1_2:-67127036 Msa0086380:CDS
TTATATATAGCTAGTGCTTT+TGG 0.319804 1_2:-67130544 Msa0086380:five_prime_UTR
CAAGGGCATCACAAGGTAAA+AGG 0.320473 1_2:+67127523 None:intergenic
TCTTCTATTCTGCCTCTTGT+TGG 0.326863 1_2:-67129083 Msa0086380:CDS
CATAGATATAGTATATGTTT+TGG 0.335606 1_2:-67129522 Msa0086380:CDS
TAGAATTTGTGCTTCTGGTT+TGG 0.336429 1_2:-67125002 Msa0086380:CDS
TAACAAGCATTCCACGAATA+AGG 0.339631 1_2:-67127728 Msa0086380:CDS
TTCTTGGGTGGCTATCTGTT+TGG 0.342819 1_2:-67129937 Msa0086380:CDS
ACAAAATTAAGTGAAACTTT+TGG 0.346777 1_2:+67124676 None:intergenic
ATACAAACAAGTATGAGTTT+TGG 0.350222 1_2:+67125836 None:intergenic
TGTTTGCTGCACTCTTGATA+TGG 0.359525 1_2:-67129392 Msa0086380:CDS
ACATTCCCTATGATGTTCAT+TGG 0.361666 1_2:-67129707 Msa0086380:CDS
CTTCCTTAGACGTCCATTCC+TGG 0.362695 1_2:-67129466 Msa0086380:CDS
ATATTTGTCTTTACTTTGAC+TGG 0.363874 1_2:-67130653 None:intergenic
TAGGCCCAAATAACTGGTTA+TGG 0.371532 1_2:-67125613 Msa0086380:CDS
AGAGCTCCAATGAACATCAT+AGG 0.372091 1_2:+67129701 None:intergenic
CTTATATTCCATTATTGCTT+AGG 0.373278 1_2:-67130400 Msa0086380:five_prime_UTR
ATAAACAAATCAAAACTATA+TGG 0.376001 1_2:-67125676 Msa0086380:CDS
CATTGCAGCTTGGAAACCTT+TGG 0.378460 1_2:+67127155 None:intergenic
TTATCTGTATAATTCTTTCT+CGG 0.379020 1_2:+67130324 None:intergenic
GGCGAGATTGTAAGAATCTA+AGG 0.379884 1_2:+67127571 None:intergenic
AAGACACCACTATGTATATA+TGG 0.382103 1_2:+67130105 None:intergenic
GTGTATTAGGCCCAAATAAC+TGG 0.386494 1_2:-67125619 Msa0086380:CDS
GGTGTCTATCAATGAGGAAT+AGG 0.392092 1_2:+67127592 None:intergenic
ATAGGGTGTAGCAAATCTTT+TGG 0.394432 1_2:-67130572 Msa0086380:five_prime_UTR
CAAGCATCAAGTATCATATC+TGG 0.397973 1_2:-67129046 Msa0086380:CDS
GAGGTTGGAATTCTTGTTGT+TGG 0.399373 1_2:+67125858 None:intergenic
TGAGCTGTTGAGCCAGAAAC+AGG 0.400901 1_2:+67125770 None:intergenic
TAGTTGGTCTCACGGCTAAC+AGG 0.416194 1_2:+67130198 None:intergenic
TCCATGTGCATGATTGCTCC+TGG 0.416276 1_2:-67127621 Msa0086380:CDS
CATCTTAATATTTCAGTTGA+AGG 0.416390 1_2:-67127011 Msa0086380:CDS
ATACCATAGGCCGTAACAAC+AGG 0.421219 1_2:+67130296 None:intergenic
ATTGTGATCCTAAGCAATAA+TGG 0.422095 1_2:+67130392 None:intergenic
TCCCCTGTTGTTACGGCCTA+TGG 0.422566 1_2:-67130299 Msa0086380:five_prime_UTR
CCTCAGAAATTGTGCAGTAT+GGG 0.426406 1_2:+67126977 None:intergenic
CAAGCCATAACCAGTTATTT+GGG 0.427027 1_2:+67125609 None:intergenic
TAACCAGGAATGGACGTCTA+AGG 0.428137 1_2:+67129463 None:intergenic
TTCCTGGTTATGTCTCCAAT+TGG 0.429119 1_2:-67129450 Msa0086380:CDS
TTACATAGGAAATATATGTT+TGG 0.429325 1_2:-67129135 Msa0086380:CDS
GGATGCAACTCCAGCATGTA+TGG 0.434169 1_2:+67127641 None:intergenic
AAAGGCGAGCTGATAGTAAC+CGG 0.439408 1_2:+67127541 None:intergenic
GTTAGAAACGTGCAGCATAT+TGG 0.439495 1_2:-67130595 Msa0086380:five_prime_UTR
CTATATCTATGACTTCTAAA+GGG 0.450980 1_2:+67129534 None:intergenic
CTGGTCAAACAAGCTGTATC+AGG 0.453029 1_2:-67127057 Msa0086380:CDS
TGTTTATTAGCATCTCTTGA+AGG 0.453374 1_2:+67125692 None:intergenic
ATAGCTGAAACAATTCCAAT+TGG 0.455667 1_2:+67129435 None:intergenic
ACTATATCTATGACTTCTAA+AGG 0.457044 1_2:+67129533 None:intergenic
CTCTCAGATTCTCCTATCTC+AGG 0.458926 1_2:-67125641 Msa0086380:CDS
ATCTCGGATTATAGATATGA+AGG 0.459405 1_2:+67125895 None:intergenic
GCATAAGATCTAACATGGTT+AGG 0.460957 1_2:+67125795 None:intergenic
GGCTTTGAAATATGAGATCT+CGG 0.466764 1_2:+67125879 None:intergenic
TACAATCTCGCCAACATGCC+CGG 0.468113 1_2:-67127560 Msa0086380:CDS
GTCTAATTACTCGGTATAGT+TGG 0.470743 1_2:+67130182 None:intergenic
GATAAGGTCCCCTGTTGTTA+CGG 0.471432 1_2:-67130306 Msa0086380:five_prime_UTR
AATTGGAATTGTTTCAGCTA+TGG 0.474439 1_2:-67129433 Msa0086380:CDS
GGCGCTCTAAAGAGATGTTT+AGG 0.475641 1_2:-67129489 Msa0086380:CDS
TTCAATTCTACATACTTCAG+AGG 0.486109 1_2:-67129857 Msa0086380:CDS
TCTCTTTAGAGCGCCACTGC+TGG 0.489094 1_2:+67129497 None:intergenic
GGGCCTAATACACCTGAGAT+AGG 0.494814 1_2:+67125629 None:intergenic
TTTATGAACACCAAGCTTGT+GGG 0.498876 1_2:+67127182 None:intergenic
CATGCGGAGGTGATCGAAAC+CGG 0.499697 1_2:+67129347 None:intergenic
ATATACATTAATACATGTAC+AGG 0.502760 1_2:+67124814 None:intergenic
TGCACATATGTGCCTGTACA+TGG 0.505523 1_2:-67124759 Msa0086380:three_prime_UTR
ATCAAGTATCATATCTGGCT+TGG 0.506171 1_2:-67129041 Msa0086380:CDS
TCTTTGAGACTTGCTTACAT+AGG 0.511722 1_2:-67129149 Msa0086380:CDS
CCAAATAACTGGTTATGGCT+TGG 0.512969 1_2:-67125608 Msa0086380:CDS
AACTAGAAGTCACTGTAAAA+GGG 0.514748 1_2:+67127129 None:intergenic
TTATTCTATGCCATACATGC+TGG 0.517974 1_2:-67127651 Msa0086380:CDS
TCATAGGGAATGTGAAAAGC+AGG 0.518452 1_2:+67129717 None:intergenic
GAGAAAGAATTATACAGATA+AGG 0.524059 1_2:-67130322 Msa0086380:five_prime_UTR
GTGATGGTGAGTGGCGGAAG+TGG 0.524506 1_2:-67125926 Msa0086380:CDS
TCTCATCTTGTTTGTGCATG+CGG 0.524678 1_2:+67129331 None:intergenic
AAACGTGCAGCATATTGGAT+AGG 0.524943 1_2:-67130590 Msa0086380:five_prime_UTR
GAGCTCCAATGAACATCATA+GGG 0.528983 1_2:+67129702 None:intergenic
GGTGTTCATAAATGTTCCAA+AGG 0.529380 1_2:-67127171 Msa0086380:CDS
AAGACTTCTGTTGGTTACAA+TGG 0.530051 1_2:+67130448 None:intergenic
ACATATGTATCAAATGTAGC+TGG 0.530392 1_2:-67127786 Msa0086380:CDS
ATACTATAACCCCACAAGCT+TGG 0.531979 1_2:-67127192 Msa0086380:CDS
TTGTGCAGTATGGGGTCCGT+AGG 0.532948 1_2:+67126986 None:intergenic
TTCTTGTGATGTTTCTTGGG+TGG 0.536413 1_2:-67129949 Msa0086380:CDS
ATATACATTAATCCATGTAC+AGG 0.536935 1_2:+67124747 None:intergenic
ATTTATGAACACCAAGCTTG+TGG 0.539444 1_2:+67127181 None:intergenic
ATAATGGAATATAAGATATG+TGG 0.540763 1_2:+67130408 None:intergenic
AAAAGAGTGAAGACTTCTGT+TGG 0.548873 1_2:+67130439 None:intergenic
CCCAGGAGCAATCATGCACA+TGG 0.549549 1_2:+67127620 None:intergenic
AGATATAGAGAATGTAGAGA+TGG 0.551790 1_2:+67127673 None:intergenic
TATCCAATTGAAAATAACTC+AGG 0.552964 1_2:-67125518 Msa0086380:intron
TATTTGTCTTTACTTTGACT+GGG 0.553788 1_2:-67130652 None:intergenic
GAGTGTGAAGGCAAAGATGT+TGG 0.554752 1_2:-67125067 Msa0086380:CDS
CTGATAGTAACCGGGCATGT+TGG 0.556977 1_2:+67127550 None:intergenic
ATAGAAGACATTCTTGTGAC+CGG 0.557709 1_2:+67129098 None:intergenic
GTTTATATGTTCATATTGAG+TGG 0.560587 1_2:-67124705 Msa0086380:three_prime_UTR
TTCCAATTGGAGACATAACC+AGG 0.560892 1_2:+67129448 None:intergenic
CAAAGGTTTCCAAGCTGCAA+TGG 0.560929 1_2:-67127154 Msa0086380:CDS
TTACTGTGCTTAATATGTAG+TGG 0.564531 1_2:+67130622 None:intergenic
AACGTGCAGCATATTGGATA+GGG 0.567635 1_2:-67130589 Msa0086380:five_prime_UTR
TGTTGTTACGGCCTATGGTA+TGG 0.568200 1_2:-67130294 Msa0086380:five_prime_UTR
CCCATACTGCACAATTTCTG+AGG 0.569211 1_2:-67126977 Msa0086380:intron
AAAAGGGTGCCATTGCAGCT+TGG 0.569692 1_2:+67127145 None:intergenic
ATTGGAGACATAACCAGGAA+TGG 0.570760 1_2:+67129453 None:intergenic
TGATTTCTCAGATGCTAGAG+TGG 0.575116 1_2:-67127815 Msa0086380:intron
CCATGTGCATGATTGCTCCT+GGG 0.577709 1_2:-67127620 Msa0086380:CDS
CGGTGTGTAAGTAATTGGAA+AGG 0.580568 1_2:+67129367 None:intergenic
GGTGTGTAAGTAATTGGAAA+GGG 0.580721 1_2:+67129368 None:intergenic
TCTACATACTTCAGAGGGCA+AGG 0.581290 1_2:-67129851 Msa0086380:intron
CAGAAAAGTTGCCTTCCAGA+AGG 0.582551 1_2:-67129640 Msa0086380:intron
TCAATTCTACATACTTCAGA+GGG 0.584195 1_2:-67129856 Msa0086380:CDS
ATTGCCTAATTATAACATAG+AGG 0.587466 1_2:+67124865 None:intergenic
CATCTTGTTTGTGCATGCGG+AGG 0.588578 1_2:+67129334 None:intergenic
GAAATTCTGTTTGAGTGTGA+AGG 0.590229 1_2:-67125079 Msa0086380:CDS
ACTCGGTATAGTTGGTCTCA+CGG 0.596382 1_2:+67130190 None:intergenic
ATGAGGAATAGGAAAATCCC+AGG 0.598597 1_2:+67127603 None:intergenic
TGTGCAGTATGGGGTCCGTA+GGG 0.602330 1_2:+67126987 None:intergenic
CAATCACCATATATACATAG+TGG 0.603670 1_2:-67130111 Msa0086380:five_prime_UTR
GAATTAACTAACCTTCTGGA+AGG 0.607404 1_2:+67129629 None:intergenic
GTGTCTCAAGTCTAATTACT+CGG 0.607443 1_2:+67130173 None:intergenic
TTAGATGGGAAGCAAAGTTG+AGG 0.612295 1_2:-67129178 Msa0086380:intron
ATTTCAGTTGAAGGACCCTA+CGG 0.612975 1_2:-67127002 Msa0086380:CDS
TGCATCGTGTAGAATATGAA+AGG 0.613428 1_2:+67130064 None:intergenic
TGGAATGCTTGTTATCCACA+TGG 0.616270 1_2:+67127737 None:intergenic
CTCAGAAATTGTGCAGTATG+GGG 0.616586 1_2:+67126978 None:intergenic
TCTCGGATTATAGATATGAA+GGG 0.617254 1_2:+67125896 None:intergenic
TTATGAACACCAAGCTTGTG+GGG 0.617409 1_2:+67127183 None:intergenic
ATGGAATATAAGATATGTGG+AGG 0.620433 1_2:+67130411 None:intergenic
CTTTCCAATTACTTACACAC+CGG 0.620526 1_2:-67129366 Msa0086380:CDS
GTTTAATAGCGTTAGCCATG+TGG 0.627149 1_2:-67127752 Msa0086380:CDS
TATGCTCACAGCCATACCAT+AGG 0.629729 1_2:+67130283 None:intergenic
AGGAAGCATAAGATCTAACA+TGG 0.631448 1_2:+67125790 None:intergenic
ATCTAAGGTGTCTATCAATG+AGG 0.634860 1_2:+67127586 None:intergenic
GAGCAGATTGTGATGGTGAG+TGG 0.645766 1_2:-67125935 Msa0086380:CDS
TACCATAGGCCGTAACAACA+GGG 0.648138 1_2:+67130297 None:intergenic
TCAGATGTGAGTCCAACAAG+AGG 0.651442 1_2:+67129071 None:intergenic
GATGTTGGAGTTATGACTTG+TGG 0.660013 1_2:-67125052 Msa0086380:CDS
AAGGCGAGCTGATAGTAACC+GGG 0.669575 1_2:+67127542 None:intergenic
CTGAGATAGGAGAATCTGAG+AGG 0.686082 1_2:+67125642 None:intergenic
CAGGCATGAGCAGATTGTGA+TGG 0.694392 1_2:-67125942 Msa0086380:CDS
CGGCTAACAGGATACAACAG+CGG 0.720650 1_2:+67130210 None:intergenic
ACCATAGGCCGTAACAACAG+GGG 0.722972 1_2:+67130298 None:intergenic
CAGATTGTGATGGTGAGTGG+CGG 0.723418 1_2:-67125932 Msa0086380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAATATTACTATTATTAT+TGG + chr1_2:67125188-67125207 None:intergenic 10.0%
!! ATAAAGATTATTGTATAATT+TGG - chr1_2:67126110-67126129 Msa0086380:intron 10.0%
!!! TTTTTATTTTCAAACATAAA+TGG - chr1_2:67126638-67126657 Msa0086380:intron 10.0%
!!! TTTTATTTTCAAACATAAAT+GGG - chr1_2:67126639-67126658 Msa0086380:intron 10.0%
!! GAAACTATTATTATTAATAA+TGG - chr1_2:67126668-67126687 Msa0086380:intron 10.0%
!!! AGAAATATTTTTTTATTACT+CGG + chr1_2:67128054-67128073 None:intergenic 10.0%
!!! TAACAAATTTATCATTTTTT+TGG - chr1_2:67128097-67128116 Msa0086380:intron 10.0%
!!! TTTTTGTTTTATATTTTACT+CGG - chr1_2:67129286-67129305 Msa0086380:intron 10.0%
!!! TTAATGTATATTTTATGATT+AGG - chr1_2:67130532-67130551 Msa0086380:five_prime_UTR 10.0%
!!! TTATTTTTTCTTGATGAAAA+TGG + chr1_2:67125674-67125693 None:intergenic 15.0%
!! ATTAAAGATTCAAGTAATTA+AGG + chr1_2:67125753-67125772 None:intergenic 15.0%
!!! AATTGTCTTTTTTCTTTTTT+TGG + chr1_2:67126445-67126464 None:intergenic 15.0%
!! ATATTGAATTCAAAATTATG+AGG - chr1_2:67126788-67126807 Msa0086380:intron 15.0%
!! TTAAATATCATGAAATTAGT+TGG - chr1_2:67126937-67126956 Msa0086380:intron 15.0%
!! TTACATAGTATTATACTATA+AGG + chr1_2:67127275-67127294 None:intergenic 15.0%
!! TGAAAATAATGAAAATGTTA+TGG + chr1_2:67127317-67127336 None:intergenic 15.0%
!!! ATAACATTTTCATTATTTTC+AGG - chr1_2:67127316-67127335 Msa0086380:intron 15.0%
!!! GTATGTTAATAAACTATTTT+GGG + chr1_2:67127383-67127402 None:intergenic 15.0%
!!! AGTATGTTAATAAACTATTT+TGG + chr1_2:67127384-67127403 None:intergenic 15.0%
!! AAGAAAATCAAAACTTTATA+TGG - chr1_2:67127860-67127879 Msa0086380:intron 15.0%
!!! ATAAATTTGTTAGTAAAACT+TGG + chr1_2:67128089-67128108 None:intergenic 15.0%
!! GTAAAATATAAAACAAAAAC+AGG + chr1_2:67129285-67129304 None:intergenic 15.0%
!! ATAAACAAATCAAAACTATA+TGG - chr1_2:67129658-67129677 Msa0086380:CDS 15.0%
!!! ATAATGGAATATAAGATATG+TGG + chr1_2:67124929-67124948 None:intergenic 20.0%
!! TTATCTGTATAATTCTTTCT+CGG + chr1_2:67125013-67125032 None:intergenic 20.0%
!!! AGTAGTTCTTAACTTTTTTA+GGG - chr1_2:67125586-67125605 Msa0086380:CDS 20.0%
!!! CATAGATATAGTATATGTTT+TGG - chr1_2:67125812-67125831 Msa0086380:CDS 20.0%
!!! TAATTTGGTGTATTGATTAT+TGG - chr1_2:67126125-67126144 Msa0086380:intron 20.0%
!! TTACATAGGAAATATATGTT+TGG - chr1_2:67126199-67126218 Msa0086380:intron 20.0%
!!! CATTGGTTTTATCATTTATT+GGG - chr1_2:67126348-67126367 Msa0086380:intron 20.0%
!! TGAAATTCTGATTCATATTT+AGG - chr1_2:67126464-67126483 Msa0086380:intron 20.0%
!! AAAATTATGAGGAAAAACAA+AGG - chr1_2:67126799-67126818 Msa0086380:intron 20.0%
!! AAATTATGAGGAAAAACAAA+GGG - chr1_2:67126800-67126819 Msa0086380:intron 20.0%
!!! TGTCATTTGTTTTTTACAAT+TGG - chr1_2:67127123-67127142 Msa0086380:CDS 20.0%
!!! GTCATTTGTTTTTTACAATT+GGG - chr1_2:67127124-67127143 Msa0086380:CDS 20.0%
!! GTAAATTACTTATCCAAATA+AGG - chr1_2:67127291-67127310 Msa0086380:intron 20.0%
!!! AAAGTTTTGATTTTCTTACT+AGG + chr1_2:67127857-67127876 None:intergenic 20.0%
!! AAAACTTTATATGGAAGAAT+AGG - chr1_2:67127869-67127888 Msa0086380:intron 20.0%
!! ATATAGTACTGTAAATATGA+AGG - chr1_2:67128431-67128450 Msa0086380:intron 20.0%
!!! AAATATGAAGGTTTTTATTG+TGG - chr1_2:67128443-67128462 Msa0086380:intron 20.0%
!!! TTTTGAAAATACAAACAAGT+AGG + chr1_2:67129071-67129090 None:intergenic 20.0%
!! ATTTATACTGTGGTAAAATA+AGG - chr1_2:67129139-67129158 Msa0086380:CDS 20.0%
!! GGTAAAATAAGGATAAATTA+CGG - chr1_2:67129150-67129169 Msa0086380:CDS 20.0%
!! ATATACATTAATACATGTAC+AGG + chr1_2:67130523-67130542 None:intergenic 20.0%
!! TATAAACATGAAAAACATAG+AGG + chr1_2:67130616-67130635 None:intergenic 20.0%
!! TTATATATAGCTAGTGCTTT+TGG - chr1_2:67124790-67124809 Msa0086380:three_prime_UTR 25.0%
! CTTATATTCCATTATTGCTT+AGG - chr1_2:67124934-67124953 Msa0086380:three_prime_UTR 25.0%
!! TTCTTTCTTTTCTTAAACGT+TGG - chr1_2:67124973-67124992 Msa0086380:CDS 25.0%
! GAGAAAGAATTATACAGATA+AGG - chr1_2:67125012-67125031 Msa0086380:CDS 25.0%
! TCACAAGAAAAATGATTCTT+AGG + chr1_2:67125374-67125393 None:intergenic 25.0%
!! ATTTTTCTTGTGATGTTTCT+TGG - chr1_2:67125381-67125400 Msa0086380:intron 25.0%
!! TTTTTCTTGTGATGTTTCTT+GGG - chr1_2:67125382-67125401 Msa0086380:intron 25.0%
!! ATCTTTTTGTAGATCTTAGT+AGG + chr1_2:67125432-67125451 None:intergenic 25.0%
! TAAGATCTACAAAAAGATCT+GGG - chr1_2:67125434-67125453 Msa0086380:intron 25.0%
!!! CAGTAGTTCTTAACTTTTTT+AGG - chr1_2:67125585-67125604 Msa0086380:CDS 25.0%
!! TTTAGAATTAACTAACCTTC+TGG + chr1_2:67125712-67125731 None:intergenic 25.0%
! CTATATCTATGACTTCTAAA+GGG + chr1_2:67125803-67125822 None:intergenic 25.0%
! ACTATATCTATGACTTCTAA+AGG + chr1_2:67125804-67125823 None:intergenic 25.0%
!!! TTATTGGTCTTTGTATTAGA+TGG - chr1_2:67126141-67126160 Msa0086380:intron 25.0%
!!! TATTGGTCTTTGTATTAGAT+GGG - chr1_2:67126142-67126161 Msa0086380:intron 25.0%
! CCAATAAATGATAAAACCAA+TGG + chr1_2:67126350-67126369 None:intergenic 25.0%
!!! CCATTGGTTTTATCATTTAT+TGG - chr1_2:67126347-67126366 Msa0086380:intron 25.0%
!!! TACTGTACATGTTTTTTTGA+TGG - chr1_2:67126403-67126422 Msa0086380:intron 25.0%
!!! ACTGTACATGTTTTTTTGAT+GGG - chr1_2:67126404-67126423 Msa0086380:intron 25.0%
!!! TGTCTTTTTTCTTTTTTTGG+AGG + chr1_2:67126442-67126461 None:intergenic 25.0%
! CATATTTAGGTACTCTATTT+AGG - chr1_2:67126477-67126496 Msa0086380:intron 25.0%
! TTGAAATCCCATAATATATG+TGG - chr1_2:67126521-67126540 Msa0086380:intron 25.0%
! TAGCTACTAAACTTCATTAT+TGG + chr1_2:67126602-67126621 None:intergenic 25.0%
! TTTCAAACATAAATGGGTAA+AGG - chr1_2:67126645-67126664 Msa0086380:intron 25.0%
! TTCAAACATAAATGGGTAAA+GGG - chr1_2:67126646-67126665 Msa0086380:intron 25.0%
! AAATTGTTATATTGTGCAAG+AGG + chr1_2:67126762-67126781 None:intergenic 25.0%
! TGTTAACTAGAATTCTTGAT+TGG + chr1_2:67126844-67126863 None:intergenic 25.0%
! AAAGAACAAGCTATATTTAG+TGG + chr1_2:67126982-67127001 None:intergenic 25.0%
! ATTTACTACATCAAACTCAA+AGG - chr1_2:67127096-67127115 Msa0086380:CDS 25.0%
!!! TTGTTTTTTACAATTGGGAA+AGG - chr1_2:67127129-67127148 Msa0086380:CDS 25.0%
!!! TGTTTTTTACAATTGGGAAA+GGG - chr1_2:67127130-67127149 Msa0086380:CDS 25.0%
!! GTTTGACTTTGTAATTTCAA+GGG + chr1_2:67127222-67127241 None:intergenic 25.0%
!! AGTTTGACTTTGTAATTTCA+AGG + chr1_2:67127223-67127242 None:intergenic 25.0%
! CATACTATATAAAGAGAGAT+TGG - chr1_2:67127398-67127417 Msa0086380:intron 25.0%
! CATATTAATGATCTTTCTGA+TGG + chr1_2:67127425-67127444 None:intergenic 25.0%
! TTTATATGGAAGAATAGGTT+TGG - chr1_2:67127874-67127893 Msa0086380:intron 25.0%
! TGGTATGTAATTCATATAGA+TGG - chr1_2:67127894-67127913 Msa0086380:intron 25.0%
! TTTGTTAGTAAAACTTGGTT+AGG + chr1_2:67128084-67128103 None:intergenic 25.0%
! TATAGTATAAACCTGAAGTT+AGG + chr1_2:67128130-67128149 None:intergenic 25.0%
! AGTATTGCCATAAAAAATGT+GGG - chr1_2:67128251-67128270 Msa0086380:intron 25.0%
! CATCTTAATATTTCAGTTGA+AGG - chr1_2:67128323-67128342 Msa0086380:intron 25.0%
! GATACTTCAAACTAATAACA+TGG + chr1_2:67128472-67128491 None:intergenic 25.0%
! CATATTTACCAACATTACAT+TGG + chr1_2:67128624-67128643 None:intergenic 25.0%
!! TGTAATGTTGGTAAATATGA+AGG - chr1_2:67128625-67128644 Msa0086380:intron 25.0%
!! GTAATGTTGGTAAATATGAA+GGG - chr1_2:67128626-67128645 Msa0086380:intron 25.0%
!! TTGAGTATATGAATTTTTCG+CGG - chr1_2:67128701-67128720 Msa0086380:intron 25.0%
! TGTTTAAATGTGTTATGTTG+TGG - chr1_2:67128762-67128781 Msa0086380:intron 25.0%
! AAAACAGGCTAGATTTATAA+AGG + chr1_2:67129270-67129289 None:intergenic 25.0%
!! ATACAAACAAGTATGAGTTT+TGG + chr1_2:67129501-67129520 None:intergenic 25.0%
! TATCCAATTGAAAATAACTC+AGG - chr1_2:67129816-67129835 Msa0086380:intron 25.0%
!! TTGAATCAATCAGCTTTAAT+TGG - chr1_2:67130370-67130389 Msa0086380:five_prime_UTR 25.0%
!!! ACATTTTAGAGGATAGTAAA+AGG + chr1_2:67130438-67130457 None:intergenic 25.0%
!! AATCAACATGAACATTTTAG+AGG + chr1_2:67130449-67130468 None:intergenic 25.0%
! GATTCCTCTATGTTATAATT+AGG - chr1_2:67130465-67130484 Msa0086380:five_prime_UTR 25.0%
! ATTGCCTAATTATAACATAG+AGG + chr1_2:67130472-67130491 None:intergenic 25.0%
! ATATACATTAATCCATGTAC+AGG + chr1_2:67130590-67130609 None:intergenic 25.0%
! GTTTATATGTTCATATTGAG+TGG - chr1_2:67130629-67130648 Msa0086380:five_prime_UTR 25.0%
TTACTGTGCTTAATATGTAG+TGG + chr1_2:67124715-67124734 None:intergenic 30.0%
! TTTTCTTTTGTGAAAGCAAG+TGG - chr1_2:67124846-67124865 Msa0086380:three_prime_UTR 30.0%
! TTTCTTTTGTGAAAGCAAGT+GGG - chr1_2:67124847-67124866 Msa0086380:three_prime_UTR 30.0%
ATGGAATATAAGATATGTGG+AGG + chr1_2:67124926-67124945 None:intergenic 30.0%
ATTGTGATCCTAAGCAATAA+TGG + chr1_2:67124945-67124964 None:intergenic 30.0%
CAATCACCATATATACATAG+TGG - chr1_2:67125223-67125242 Msa0086380:intron 30.0%
AAGACACCACTATGTATATA+TGG + chr1_2:67125232-67125251 None:intergenic 30.0%
CTAAGATCTACAAAAAGATC+TGG - chr1_2:67125433-67125452 Msa0086380:intron 30.0%
!!! TTGAACTTGTTTTGTAGCAT+GGG + chr1_2:67125462-67125481 None:intergenic 30.0%
!!! ATTGAACTTGTTTTGTAGCA+TGG + chr1_2:67125463-67125482 None:intergenic 30.0%
TTCAATTCTACATACTTCAG+AGG - chr1_2:67125477-67125496 Msa0086380:intron 30.0%
TCAATTCTACATACTTCAGA+GGG - chr1_2:67125478-67125497 Msa0086380:intron 30.0%
ATAGCTGAAACAATTCCAAT+TGG + chr1_2:67125902-67125921 None:intergenic 30.0%
AATTGGAATTGTTTCAGCTA+TGG - chr1_2:67125901-67125920 Msa0086380:CDS 30.0%
! TTTGGCATTTTTGTTCTTTC+CGG - chr1_2:67126217-67126236 Msa0086380:intron 30.0%
!!! TTTTTTTCTGCTCATTCCAT+TGG - chr1_2:67126331-67126350 Msa0086380:intron 30.0%
ATATACCTACCTCAATCATT+TGG + chr1_2:67126384-67126403 None:intergenic 30.0%
! TAGGTACTCTATTTAGGATA+AGG - chr1_2:67126483-67126502 Msa0086380:intron 30.0%
TTCCTTGCCACATATATTAT+GGG + chr1_2:67126531-67126550 None:intergenic 30.0%
ATTCCTTGCCACATATATTA+TGG + chr1_2:67126532-67126551 None:intergenic 30.0%
ATCTATTGTCTCTTTCTGTT+TGG - chr1_2:67126550-67126569 Msa0086380:intron 30.0%
AATATATTCTCTCCTTCATC+TGG - chr1_2:67126573-67126592 Msa0086380:intron 30.0%
AACCTTGAAAAGTTGTGAAA+TGG + chr1_2:67126706-67126725 None:intergenic 30.0%
TACAAAGTCAAACTTCTAGA+AGG - chr1_2:67127229-67127248 Msa0086380:intron 30.0%
!! GAAAATGTTATGGCCTTATT+TGG + chr1_2:67127307-67127326 None:intergenic 30.0%
! ACATAGTTTTCAAAAACGAC+TGG + chr1_2:67127464-67127483 None:intergenic 30.0%
TGTAGATATATATGCATGAC+TGG + chr1_2:67127492-67127511 None:intergenic 30.0%
ACATATGTATCAAATGTAGC+TGG - chr1_2:67127548-67127567 Msa0086380:CDS 30.0%
AGATATAGAGAATGTAGAGA+TGG + chr1_2:67127664-67127683 None:intergenic 30.0%
! GATTTTCTTACTAGGATTCT+TGG + chr1_2:67127849-67127868 None:intergenic 30.0%
AGTAAAACTTGGTTAGGTAA+CGG + chr1_2:67128078-67128097 None:intergenic 30.0%
TTGGTTTAATTCCTAACTTC+AGG - chr1_2:67128116-67128135 Msa0086380:intron 30.0%
AACTAGAAGTCACTGTAAAA+GGG + chr1_2:67128208-67128227 None:intergenic 30.0%
! AGTGACTTCTAGTTGTAATA+TGG - chr1_2:67128214-67128233 Msa0086380:intron 30.0%
! GAGTATTGCCATAAAAAATG+TGG - chr1_2:67128250-67128269 Msa0086380:intron 30.0%
ACACTTAACCCTCAATATAA+AGG + chr1_2:67128745-67128764 None:intergenic 30.0%
AAAACAACCTAGATTTAACG+AGG + chr1_2:67128832-67128851 None:intergenic 30.0%
! TCACGGATTATAGATATGAA+GGG + chr1_2:67129003-67129022 None:intergenic 30.0%
! ATCACGGATTATAGATATGA+AGG + chr1_2:67129004-67129023 None:intergenic 30.0%
! ATACAAACAAGTAGGAGTTT+TGG + chr1_2:67129063-67129082 None:intergenic 30.0%
ATAAGGATAAATTACGGTTG+CGG - chr1_2:67129156-67129175 Msa0086380:CDS 30.0%
! GGACTGCAATTTAAAACTAT+TGG - chr1_2:67129177-67129196 Msa0086380:CDS 30.0%
! CAATTTAAAACTATTGGAGC+AGG - chr1_2:67129183-67129202 Msa0086380:intron 30.0%
!! CATCATTCTATCTCTAAAAC+AGG - chr1_2:67129373-67129392 Msa0086380:CDS 30.0%
TCTCGGATTATAGATATGAA+GGG + chr1_2:67129441-67129460 None:intergenic 30.0%
ATCTCGGATTATAGATATGA+AGG + chr1_2:67129442-67129461 None:intergenic 30.0%
TGTTTATTAGCATCTCTTGA+AGG + chr1_2:67129645-67129664 None:intergenic 30.0%
! ATCATGTTTCTCCTCTTTTT+AGG - chr1_2:67129771-67129790 Msa0086380:intron 30.0%
GAGTAACAATTCCTAAAAAG+AGG + chr1_2:67129785-67129804 None:intergenic 30.0%
!! TCACCTGAGTTATTTTCAAT+TGG + chr1_2:67129822-67129841 None:intergenic 30.0%
!!! GTTCTAGTGTTGTTTTTCTT+TGG - chr1_2:67129907-67129926 Msa0086380:CDS 30.0%
! CAAGCTACAAATGTACATTT+TGG - chr1_2:67130062-67130081 Msa0086380:five_prime_UTR 30.0%
TGTATCTTGTATCAATGAGA+TGG - chr1_2:67130205-67130224 Msa0086380:five_prime_UTR 30.0%
!! ACTTCATGTCTCATTTTTCT+TGG + chr1_2:67130309-67130328 None:intergenic 30.0%
! ATAGGGTGTAGCAAATCTTT+TGG - chr1_2:67124762-67124781 Msa0086380:three_prime_UTR 35.0%
! TTCTTTTGTGAAAGCAAGTG+GGG - chr1_2:67124848-67124867 Msa0086380:three_prime_UTR 35.0%
! AAGACTTCTGTTGGTTACAA+TGG + chr1_2:67124889-67124908 None:intergenic 35.0%
AAAAGAGTGAAGACTTCTGT+TGG + chr1_2:67124898-67124917 None:intergenic 35.0%
GTCTAATTACTCGGTATAGT+TGG + chr1_2:67125155-67125174 None:intergenic 35.0%
GTGTCTCAAGTCTAATTACT+CGG + chr1_2:67125164-67125183 None:intergenic 35.0%
TGCATCGTGTAGAATATGAA+AGG + chr1_2:67125273-67125292 None:intergenic 35.0%
ACATTCCCTATGATGTTCAT+TGG - chr1_2:67125627-67125646 Msa0086380:CDS 35.0%
GAATTAACTAACCTTCTGGA+AGG + chr1_2:67125708-67125727 None:intergenic 35.0%
! TCAAGTAATTAAGGCTAGCT+AGG + chr1_2:67125744-67125763 None:intergenic 35.0%
GGTGTGTAAGTAATTGGAAA+GGG + chr1_2:67125969-67125988 None:intergenic 35.0%
CTTTCCAATTACTTACACAC+CGG - chr1_2:67125968-67125987 Msa0086380:intron 35.0%
!! TCTTTGAGACTTGCTTACAT+AGG - chr1_2:67126185-67126204 Msa0086380:intron 35.0%
ATAGAAGACATTCTTGTGAC+CGG + chr1_2:67126239-67126258 None:intergenic 35.0%
CAAGCATCAAGTATCATATC+TGG - chr1_2:67126288-67126307 Msa0086380:intron 35.0%
ATCAAGTATCATATCTGGCT+TGG - chr1_2:67126293-67126312 Msa0086380:intron 35.0%
ATCCCATAATATATGTGGCA+AGG - chr1_2:67126526-67126545 Msa0086380:intron 35.0%
! GACCATTTCACAACTTTTCA+AGG - chr1_2:67126701-67126720 Msa0086380:intron 35.0%
TAACAAGCATTCCACGAATA+AGG - chr1_2:67127606-67127625 Msa0086380:CDS 35.0%
!! TACATTTTACGCCTTATTCG+TGG + chr1_2:67127620-67127639 None:intergenic 35.0%
TTATTCTATGCCATACATGC+TGG - chr1_2:67127683-67127702 Msa0086380:CDS 35.0%
! ATCTAAGGTGTCTATCAATG+AGG + chr1_2:67127751-67127770 None:intergenic 35.0%
TTTATGAACACCAAGCTTGT+GGG + chr1_2:67128155-67128174 None:intergenic 35.0%
ATTTATGAACACCAAGCTTG+TGG + chr1_2:67128156-67128175 None:intergenic 35.0%
GGTGTTCATAAATGTTCCAA+AGG - chr1_2:67128163-67128182 Msa0086380:intron 35.0%
CAACTAGAAGTCACTGTAAA+AGG + chr1_2:67128209-67128228 None:intergenic 35.0%
!! CACAATTTCTGAGGTTAGTT+TGG - chr1_2:67128366-67128385 Msa0086380:intron 35.0%
! CACATGTTTTCCATCTACAA+GGG - chr1_2:67128566-67128585 Msa0086380:intron 35.0%
GAAATCGAGACCTTACTTAA+GGG - chr1_2:67128591-67128610 Msa0086380:intron 35.0%
GCTGCAAACCTTTATATTGA+GGG - chr1_2:67128734-67128753 Msa0086380:intron 35.0%
!! AGCTTTGAATTACGAGATCA+CGG + chr1_2:67129020-67129039 None:intergenic 35.0%
TGCTGCAAACATTTATACTG+TGG - chr1_2:67129129-67129148 Msa0086380:CDS 35.0%
! TTTAAAACTATTGGAGCAGG+CGG - chr1_2:67129186-67129205 Msa0086380:intron 35.0%
GACAATGTGATTACATTCCT+AGG + chr1_2:67129244-67129263 None:intergenic 35.0%
CAGGCTAGATTTATAAAGGT+CGG + chr1_2:67129266-67129285 None:intergenic 35.0%
!! GGCTTTGAAATATGAGATCT+CGG + chr1_2:67129458-67129477 None:intergenic 35.0%
!! CAAACAAGTATGAGTTTTGG+AGG + chr1_2:67129498-67129517 None:intergenic 35.0%
GCATAAGATCTAACATGGTT+AGG + chr1_2:67129542-67129561 None:intergenic 35.0%
! AGGAAGCATAAGATCTAACA+TGG + chr1_2:67129547-67129566 None:intergenic 35.0%
CAAGCCATAACCAGTTATTT+GGG + chr1_2:67129728-67129747 None:intergenic 35.0%
ACTCAGGTGAAGTTTATAAC+TGG - chr1_2:67129832-67129851 Msa0086380:intron 35.0%
AAGTTTATAACTGGACCTAC+AGG - chr1_2:67129841-67129860 Msa0086380:intron 35.0%
AGTTTATAACTGGACCTACA+GGG - chr1_2:67129842-67129861 Msa0086380:intron 35.0%
! TTGTAGCTTGCACTAAAGAT+GGG + chr1_2:67130052-67130071 None:intergenic 35.0%
! TTTGTAGCTTGCACTAAAGA+TGG + chr1_2:67130053-67130072 None:intergenic 35.0%
GAAATTCTGTTTGAGTGTGA+AGG - chr1_2:67130255-67130274 Msa0086380:five_prime_UTR 35.0%
! TAGAATTTGTGCTTCTGGTT+TGG - chr1_2:67130332-67130351 Msa0086380:five_prime_UTR 35.0%
GTTAGAAACGTGCAGCATAT+TGG - chr1_2:67124739-67124758 Msa0086380:three_prime_UTR 40.0%
AAACGTGCAGCATATTGGAT+AGG - chr1_2:67124744-67124763 Msa0086380:three_prime_UTR 40.0%
AACGTGCAGCATATTGGATA+GGG - chr1_2:67124745-67124764 Msa0086380:three_prime_UTR 40.0%
! GCTGTGAGCATATTTTATGC+AGG - chr1_2:67125062-67125081 Msa0086380:CDS 40.0%
TTCTTGTGATGTTTCTTGGG+TGG - chr1_2:67125385-67125404 Msa0086380:intron 40.0%
TCATAGGGAATGTGAAAAGC+AGG + chr1_2:67125620-67125639 None:intergenic 40.0%
GAGCTCCAATGAACATCATA+GGG + chr1_2:67125635-67125654 None:intergenic 40.0%
AGAGCTCCAATGAACATCAT+AGG + chr1_2:67125636-67125655 None:intergenic 40.0%
!!! ATATGTTTTGGTTCCAGCAG+TGG - chr1_2:67125824-67125843 Msa0086380:CDS 40.0%
ATTGGAGACATAACCAGGAA+TGG + chr1_2:67125884-67125903 None:intergenic 40.0%
TTCCTGGTTATGTCTCCAAT+TGG - chr1_2:67125884-67125903 Msa0086380:CDS 40.0%
TTCCAATTGGAGACATAACC+AGG + chr1_2:67125889-67125908 None:intergenic 40.0%
! TGTTTGCTGCACTCTTGATA+TGG - chr1_2:67125942-67125961 Msa0086380:CDS 40.0%
CGGTGTGTAAGTAATTGGAA+AGG + chr1_2:67125970-67125989 None:intergenic 40.0%
GAAACCGGTGTGTAAGTAAT+TGG + chr1_2:67125975-67125994 None:intergenic 40.0%
! TCTCATCTTGTTTGTGCATG+CGG + chr1_2:67126006-67126025 None:intergenic 40.0%
TTAGATGGGAAGCAAAGTTG+AGG - chr1_2:67126156-67126175 Msa0086380:intron 40.0%
TCTTCTATTCTGCCTCTTGT+TGG - chr1_2:67126251-67126270 Msa0086380:intron 40.0%
!! CTGGCTTGGACATTTATCTA+TGG - chr1_2:67126307-67126326 Msa0086380:intron 40.0%
!! CTCAATCATTTGGTTGGTGA+TGG + chr1_2:67126374-67126393 None:intergenic 40.0%
CATCACCAACCAAATGATTG+AGG - chr1_2:67126372-67126391 Msa0086380:intron 40.0%
ACCAACCAAATGATTGAGGT+AGG - chr1_2:67126376-67126395 Msa0086380:intron 40.0%
ACCTACCTCAATCATTTGGT+TGG + chr1_2:67126380-67126399 None:intergenic 40.0%
! CATTATTGGTGTCCAGATGA+AGG + chr1_2:67126588-67126607 None:intergenic 40.0%
TGATTTCTCAGATGCTAGAG+TGG - chr1_2:67127519-67127538 Msa0086380:intron 40.0%
GTTTAATAGCGTTAGCCATG+TGG - chr1_2:67127582-67127601 Msa0086380:CDS 40.0%
!! TGGAATGCTTGTTATCCACA+TGG + chr1_2:67127600-67127619 None:intergenic 40.0%
ATGAGGAATAGGAAAATCCC+AGG + chr1_2:67127734-67127753 None:intergenic 40.0%
GGTGTCTATCAATGAGGAAT+AGG + chr1_2:67127745-67127764 None:intergenic 40.0%
GGCGAGATTGTAAGAATCTA+AGG + chr1_2:67127766-67127785 None:intergenic 40.0%
ATACTATAACCCCACAAGCT+TGG - chr1_2:67128142-67128161 Msa0086380:intron 40.0%
TTATGAACACCAAGCTTGTG+GGG + chr1_2:67128154-67128173 None:intergenic 40.0%
GGAACTTTCTTCTTCGACTT+TGG - chr1_2:67128298-67128317 Msa0086380:intron 40.0%
ATTTCAGTTGAAGGACCCTA+CGG - chr1_2:67128332-67128351 Msa0086380:intron 40.0%
CTCAGAAATTGTGCAGTATG+GGG + chr1_2:67128359-67128378 None:intergenic 40.0%
CCTCAGAAATTGTGCAGTAT+GGG + chr1_2:67128360-67128379 None:intergenic 40.0%
ACCTCAGAAATTGTGCAGTA+TGG + chr1_2:67128361-67128380 None:intergenic 40.0%
GTAGATGGAAAACATGTGGT+CGG + chr1_2:67128564-67128583 None:intergenic 40.0%
CCTTGTAGATGGAAAACATG+TGG + chr1_2:67128568-67128587 None:intergenic 40.0%
! CCACATGTTTTCCATCTACA+AGG - chr1_2:67128565-67128584 Msa0086380:intron 40.0%
CGAAATCGAGACCTTACTTA+AGG - chr1_2:67128590-67128609 Msa0086380:intron 40.0%
CGCTGCAAACCTTTATATTG+AGG - chr1_2:67128733-67128752 Msa0086380:intron 40.0%
TGTCAGACCTCGTTAAATCT+AGG - chr1_2:67128822-67128841 Msa0086380:intron 40.0%
TCATCGTTGTGTCTCTAAAC+AGG - chr1_2:67128935-67128954 Msa0086380:intron 40.0%
!! CAAACAAGTAGGAGTTTTGG+AGG + chr1_2:67129060-67129079 None:intergenic 40.0%
CTCGGTCTTTCTTCAGATTT+CGG - chr1_2:67129304-67129323 Msa0086380:intron 40.0%
! GAGGTTGGAATTCTTGTTGT+TGG + chr1_2:67129479-67129498 None:intergenic 40.0%
!!! CAAGTATGAGTTTTGGAGGT+TGG + chr1_2:67129494-67129513 None:intergenic 40.0%
GATCTTATGCTTCCTGTTTC+TGG - chr1_2:67129552-67129571 Msa0086380:intron 40.0%
TCTCCTATCTCAGGTGTATT+AGG - chr1_2:67129702-67129721 Msa0086380:CDS 40.0%
GTGTATTAGGCCCAAATAAC+TGG - chr1_2:67129715-67129734 Msa0086380:CDS 40.0%
TAGGCCCAAATAACTGGTTA+TGG - chr1_2:67129721-67129740 Msa0086380:CDS 40.0%
CCAAGCCATAACCAGTTATT+TGG + chr1_2:67129729-67129748 None:intergenic 40.0%
CCAAATAACTGGTTATGGCT+TGG - chr1_2:67129726-67129745 Msa0086380:CDS 40.0%
TTACCAGGGTCATGGATTTA+TGG - chr1_2:67129996-67130015 Msa0086380:CDS 40.0%
GATGTTGGAGTTATGACTTG+TGG - chr1_2:67130282-67130301 Msa0086380:five_prime_UTR 40.0%
GTTGCTAGAATTTGTGCTTC+TGG - chr1_2:67130327-67130346 Msa0086380:five_prime_UTR 40.0%
GATAAGGTCCCCTGTTGTTA+CGG - chr1_2:67125028-67125047 Msa0086380:CDS 45.0%
TACCATAGGCCGTAACAACA+GGG + chr1_2:67125040-67125059 None:intergenic 45.0%
ATACCATAGGCCGTAACAAC+AGG + chr1_2:67125041-67125060 None:intergenic 45.0%
TGTTGTTACGGCCTATGGTA+TGG - chr1_2:67125040-67125059 Msa0086380:CDS 45.0%
TATGCTCACAGCCATACCAT+AGG + chr1_2:67125054-67125073 None:intergenic 45.0%
! ACTCGGTATAGTTGGTCTCA+CGG + chr1_2:67125147-67125166 None:intergenic 45.0%
TTCTTGGGTGGCTATCTGTT+TGG - chr1_2:67125397-67125416 Msa0086380:intron 45.0%
TCTACATACTTCAGAGGGCA+AGG - chr1_2:67125483-67125502 Msa0086380:intron 45.0%
CAGAAAAGTTGCCTTCCAGA+AGG - chr1_2:67125694-67125713 Msa0086380:CDS 45.0%
!! GGCGCTCTAAAGAGATGTTT+AGG - chr1_2:67125845-67125864 Msa0086380:CDS 45.0%
TAACCAGGAATGGACGTCTA+AGG + chr1_2:67125874-67125893 None:intergenic 45.0%
TCAGATGTGAGTCCAACAAG+AGG + chr1_2:67126266-67126285 None:intergenic 45.0%
!! CAAGAGGTGTCAACTACAAG+TGG + chr1_2:67126746-67126765 None:intergenic 45.0%
AAAGGCGAGCTGATAGTAAC+CGG + chr1_2:67127796-67127815 None:intergenic 45.0%
!! CAAGGGCATCACAAGGTAAA+AGG + chr1_2:67127814-67127833 None:intergenic 45.0%
CTTGGAGAAGTTGAGCTCAA+GGG + chr1_2:67127831-67127850 None:intergenic 45.0%
TCTTGGAGAAGTTGAGCTCA+AGG + chr1_2:67127832-67127851 None:intergenic 45.0%
CATTGCAGCTTGGAAACCTT+TGG + chr1_2:67128182-67128201 None:intergenic 45.0%
CAAAGGTTTCCAAGCTGCAA+TGG - chr1_2:67128180-67128199 Msa0086380:intron 45.0%
!!! CCAGCTGCCCACATTTTTTA+TGG + chr1_2:67128261-67128280 None:intergenic 45.0%
CCATAAAAAATGTGGGCAGC+TGG - chr1_2:67128258-67128277 Msa0086380:intron 45.0%
CTGGTCAAACAAGCTGTATC+AGG - chr1_2:67128277-67128296 Msa0086380:intron 45.0%
CCCATACTGCACAATTTCTG+AGG - chr1_2:67128357-67128376 Msa0086380:intron 45.0%
CCCTTGCGGAGATTAGTAAT+CGG + chr1_2:67128506-67128525 None:intergenic 45.0%
CCGATTACTAATCTCCGCAA+GGG - chr1_2:67128503-67128522 Msa0086380:intron 45.0%
ATCTGGCTGTCTACCTTTAG+TGG - chr1_2:67128527-67128546 Msa0086380:intron 45.0%
TCTGGCTGTCTACCTTTAGT+GGG - chr1_2:67128528-67128547 Msa0086380:intron 45.0%
TCGATTTCGACCCTTGTAGA+TGG + chr1_2:67128579-67128598 None:intergenic 45.0%
GAGACCTTACTTAAGGGACT+CGG - chr1_2:67128597-67128616 Msa0086380:intron 45.0%
GACTCGGACCAATGTAATGT+TGG - chr1_2:67128613-67128632 Msa0086380:intron 45.0%
TTATGTTGTGGCCGCAATTG+CGG - chr1_2:67128774-67128793 Msa0086380:intron 45.0%
CAGGCATGAACAGATTGTGA+TGG - chr1_2:67128954-67128973 Msa0086380:intron 45.0%
! GAACAGATTGTGATGGTGAG+TGG - chr1_2:67128961-67128980 Msa0086380:intron 45.0%
GACGTTCATAGTTAAACCGC+TGG - chr1_2:67129097-67129116 Msa0086380:CDS 45.0%
TGCAGCATAAACAGAACCAG+CGG + chr1_2:67129116-67129135 None:intergenic 45.0%
TTACATTCCTAGGAGCAGAG+CGG + chr1_2:67129234-67129253 None:intergenic 45.0%
CTGAGATAGGAGAATCTGAG+AGG + chr1_2:67129695-67129714 None:intergenic 45.0%
CTCTCAGATTCTCCTATCTC+AGG - chr1_2:67129693-67129712 Msa0086380:CDS 45.0%
CATGTACCACATAACCCTGT+AGG + chr1_2:67129859-67129878 None:intergenic 45.0%
CAACGCCAGAAAGATTACCA+GGG - chr1_2:67129982-67130001 Msa0086380:CDS 45.0%
CATGACCCTGGTAATCTTTC+TGG + chr1_2:67129990-67130009 None:intergenic 45.0%
CAGAAAGATTACCAGGGTCA+TGG - chr1_2:67129988-67130007 Msa0086380:CDS 45.0%
GAACCATAAATCCATGACCC+TGG + chr1_2:67130002-67130021 None:intergenic 45.0%
CCTCACTTACTCTTGAGATC+AGG + chr1_2:67130095-67130114 None:intergenic 45.0%
CCTGATCTCAAGAGTAAGTG+AGG - chr1_2:67130092-67130111 Msa0086380:five_prime_UTR 45.0%
GAGTGTGAAGGCAAAGATGT+TGG - chr1_2:67130267-67130286 Msa0086380:five_prime_UTR 45.0%
TGCACATATGTGCCTGTACA+TGG - chr1_2:67130575-67130594 Msa0086380:five_prime_UTR 45.0%
ACCATAGGCCGTAACAACAG+GGG + chr1_2:67125039-67125058 None:intergenic 50.0%
CGGCTAACAGGATACAACAG+CGG + chr1_2:67125127-67125146 None:intergenic 50.0%
! TAGTTGGTCTCACGGCTAAC+AGG + chr1_2:67125139-67125158 None:intergenic 50.0%
CTTCCTTAGACGTCCATTCC+TGG - chr1_2:67125868-67125887 Msa0086380:CDS 50.0%
! CATCTTGTTTGTGCATGCGG+AGG + chr1_2:67126003-67126022 None:intergenic 50.0%
GGATGCAACTCCAGCATGTA+TGG + chr1_2:67127696-67127715 None:intergenic 50.0%
TCCATGTGCATGATTGCTCC+TGG - chr1_2:67127713-67127732 Msa0086380:CDS 50.0%
CCATGTGCATGATTGCTCCT+GGG - chr1_2:67127714-67127733 Msa0086380:CDS 50.0%
TACAATCTCGCCAACATGCC+CGG - chr1_2:67127774-67127793 Msa0086380:CDS 50.0%
CTGATAGTAACCGGGCATGT+TGG + chr1_2:67127787-67127806 None:intergenic 50.0%
AAGGCGAGCTGATAGTAACC+GGG + chr1_2:67127795-67127814 None:intergenic 50.0%
!! TTGAGCTCAAGGGCATCACA+AGG + chr1_2:67127821-67127840 None:intergenic 50.0%
!! AAAAGGGTGCCATTGCAGCT+TGG + chr1_2:67128192-67128211 None:intergenic 50.0%
GCCGATTACTAATCTCCGCA+AGG - chr1_2:67128502-67128521 Msa0086380:intron 50.0%
CTAATCTCCGCAAGGGAATC+TGG - chr1_2:67128510-67128529 Msa0086380:intron 50.0%
TAGACAGCCAGATTCCCTTG+CGG + chr1_2:67128520-67128539 None:intergenic 50.0%
CTGGCTGTCTACCTTTAGTG+GGG - chr1_2:67128529-67128548 Msa0086380:intron 50.0%
TGGTCCGAGTCCCTTAAGTA+AGG + chr1_2:67128604-67128623 None:intergenic 50.0%
! CAGATTGTGATGGTGAGTGG+TGG - chr1_2:67128964-67128983 Msa0086380:intron 50.0%
CAGGCATGAGCAGATTGTGA+TGG - chr1_2:67129392-67129411 Msa0086380:CDS 50.0%
! GAGCAGATTGTGATGGTGAG+TGG - chr1_2:67129399-67129418 Msa0086380:CDS 50.0%
! CAGATTGTGATGGTGAGTGG+CGG - chr1_2:67128964-67128983 Msa0086380:intron 50.0%
TGAGCTGTTGAGCCAGAAAC+AGG + chr1_2:67129567-67129586 None:intergenic 50.0%
GGGCCTAATACACCTGAGAT+AGG + chr1_2:67129708-67129727 None:intergenic 50.0%
ACTGGACCTACAGGGTTATG+TGG - chr1_2:67129850-67129869 Msa0086380:intron 50.0%
! CCTGGTAATCTTTCTGGCGT+TGG + chr1_2:67129984-67130003 None:intergenic 50.0%
CCAACGCCAGAAAGATTACC+AGG - chr1_2:67129981-67130000 Msa0086380:CDS 50.0%
GCACTAAAGATGGGCAAGGA+AGG + chr1_2:67130043-67130062 None:intergenic 50.0%
GCTTGCACTAAAGATGGGCA+AGG + chr1_2:67130047-67130066 None:intergenic 50.0%
TCCCCTGTTGTTACGGCCTA+TGG - chr1_2:67125035-67125054 Msa0086380:CDS 55.0%
!! TCTCTTTAGAGCGCCACTGC+TGG + chr1_2:67125840-67125859 None:intergenic 55.0%
CATGCGGAGGTGATCGAAAC+CGG + chr1_2:67125990-67126009 None:intergenic 55.0%
CCCAGGAGCAATCATGCACA+TGG + chr1_2:67127717-67127736 None:intergenic 55.0%
TGTGCAGTATGGGGTCCGTA+GGG + chr1_2:67128350-67128369 None:intergenic 55.0%
TTGTGCAGTATGGGGTCCGT+AGG + chr1_2:67128351-67128370 None:intergenic 55.0%
GGAAAACATGTGGTCGGACG+AGG + chr1_2:67128558-67128577 None:intergenic 55.0%
ACAGTCCGCAACCGCAATTG+CGG + chr1_2:67128788-67128807 None:intergenic 55.0%
! GTGATGGTGAGTGGTGGAAG+TGG - chr1_2:67128970-67128989 Msa0086380:intron 55.0%
GATAAGTCTGCAGCTGCGTG+CGG + chr1_2:67130177-67130196 None:intergenic 55.0%
GGACGAGGAGACCCCACTAA+AGG + chr1_2:67128543-67128562 None:intergenic 60.0%
TGTGGCCGCAATTGCGGTTG+CGG - chr1_2:67128780-67128799 Msa0086380:intron 60.0%
AACCTAGCCGCTCTGCTCCT+AGG - chr1_2:67129224-67129243 Msa0086380:intron 60.0%
TTCCTAGGAGCAGAGCGGCT+AGG + chr1_2:67129229-67129248 None:intergenic 60.0%
! GTGATGGTGAGTGGCGGAAG+TGG - chr1_2:67129408-67129427 Msa0086380:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 67124690 67130666 67124690 ID=Msa0086380;Name=Msa0086380
chr1_2 mRNA 67124690 67130666 67124690 ID=Msa0086380-mRNA-1;Parent=Msa0086380;Name=Msa0086380-mRNA-1;_AED=0.26;_eAED=0.27;_QI=643|0.28|0.37|1|1|1|8|271|605
chr1_2 exon 67124690 67125100 67124690 ID=Msa0086380-mRNA-1:exon:22740;Parent=Msa0086380-mRNA-1
chr1_2 exon 67125519 67125961 67125519 ID=Msa0086380-mRNA-1:exon:22739;Parent=Msa0086380-mRNA-1
chr1_2 exon 67126978 67127218 67126978 ID=Msa0086380-mRNA-1:exon:22738;Parent=Msa0086380-mRNA-1
chr1_2 exon 67127535 67127826 67127535 ID=Msa0086380-mRNA-1:exon:22737;Parent=Msa0086380-mRNA-1
chr1_2 exon 67129028 67129196 67129028 ID=Msa0086380-mRNA-1:exon:22736;Parent=Msa0086380-mRNA-1
chr1_2 exon 67129327 67129559 67129327 ID=Msa0086380-mRNA-1:exon:22735;Parent=Msa0086380-mRNA-1
chr1_2 exon 67129641 67129768 67129641 ID=Msa0086380-mRNA-1:exon:22734;Parent=Msa0086380-mRNA-1
chr1_2 exon 67129852 67130666 67129852 ID=Msa0086380-mRNA-1:exon:22733;Parent=Msa0086380-mRNA-1
chr1_2 five_prime_UTR 67130024 67130666 67130024 ID=Msa0086380-mRNA-1:five_prime_utr;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67129852 67130023 67129852 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67129641 67129768 67129641 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67129327 67129559 67129327 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67129028 67129196 67129028 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67127535 67127826 67127535 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67126978 67127218 67126978 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67125519 67125961 67125519 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 CDS 67124961 67125100 67124961 ID=Msa0086380-mRNA-1:cds;Parent=Msa0086380-mRNA-1
chr1_2 three_prime_UTR 67124690 67124960 67124690 ID=Msa0086380-mRNA-1:three_prime_utr;Parent=Msa0086380-mRNA-1
Gene Sequence

>Msa0086380

ATGTGCATTATGATGATGAAGAGACACACAATAATATTCCTAAGAATCATTTTTCTTGTGATGTTTCTTGGGTGGCTATCTGTTTGGATCTTGTTGCCTACTAAGATCTACAAAAAGATCTGGGCTCCCATGCTACAAAACAAGTTCAATTCTACATACTTCAGAGGGCAAGTAGTTCTTAACTTTTTTAGGGATAAATCTCCTGCTTTTCACATTCCCTATGATGTTCATTGGAGCTCTGAGTTGTATTTATCTCCATTTTCATCAAGAAAAAATAACAGAAAAGTTGCCTTCCAGAAGTTTCCCTTTAGAAGTCATAGATATAGTATATGTTTTGGTTCCAGCAGTGGCGCTCTAAAGAGATGTTTAGGCTTCCTTAGACGTCCATTCCTGGTTATGTCTCCAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGTACTCATGTTTGCTGCACTCTTGATATGGTCCCTTTCCAATTACTTACACACCGGTTTCGATCACCTCCGCATGCACAAACAAGATGAGAAAATATGGGAAGCAAAGTTGAGGAGTGTATCTTTGAGACTTGCTTACATAGGAAATATATGTTTGGCATTTTTGTTCTTTCCGGTCACAAGAATGTCTTCTATTCTGCCTCTTGTTGGACTCACATCTGAGTCAAGCATCAAGTATCATATCTGGCTTGGACATTTATCTATGATGCTAGAGTGGAGCAAGACATATGTATCAAATGTAGCTGGAGAGATTGCAAGTTTAATAGCGTTAGCCATGTGGATAACAAGCATTCCACGAATAAGGCGTAAAATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCCATACATGCTGGAGTTGCATCCATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCCCGGTTACTATCAGCTCGCCTTTTACCTTGTTTATACTATAACCCCACAAGCTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGTTGTAATATGGAGACTAACTATCTGAGTATTGCCATAAAAAATGTGGGCAGCTGGTCAAACAAGCTGTATCAGGAACTTTCTTCTTCGACTTTGGATCATCTTAATATTTCAGTTGAAGGACCCTACGGACCCCATACTGCACAATTTCTGAGGCATGAGCAGATTGTGATGGTGAGTGGCGGAAGTGGCGTAACTCCCTTCATATCTATAATCCGAGATCTCATATTTCAAAGCCAACAACAAGAATTCCAACCTCCAAAACTCATACTTGTTTGTATTTTCAAAAGCTATGCTGACCTAACCATGTTAGATCTTATGCTTCCTGTTTCTGGCTCAACAGCTCAAATCTCACAGCTTCAGTTACAAATTGAAGCTTACATCACAAGAGAAAAAGAACAACCTTCAAGAGATGCTAATAAACAAATCAAAACTATATGGTTTAAAACAAACCTCTCAGATTCTCCTATCTCAGGTGTATTAGGCCCAAATAACTGGTTATGGCTTGGTGCTATAATCACATCATCGTTCATCATGTTTCTCCTCTTTTTAGGAATTGTTACTCGTTACTATATTTATCCAATTGAAAATAACTCAGAAATTCTGTTTGAGTGTGAAGGCAAAGATGTTGGAGTTATGACTTGTGGTCCAAGAAAAATGAGACATGAAGTTGCTAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAATCAATCAGCTTTAATTGGTGA
Protein sequence

>Msa0086380

MCIMMMKRHTIIFLRIIFLVMFLGWLSVWILLPTKIYKKIWAPMLQNKFNSTYFRGQVVLNFFRDKSPAFHIPYDVHWSSELYLSPFSSRKNNRKVAFQKFPFRSHRYSICFGSSSGALKRCLGFLRRPFLVMSPIGIVSAMELIFVLMFAALLIWSLSNYLHTGFDHLRMHKQDEKIWEAKLRSVSLRLAYIGNICLAFLFFPVTRMSSILPLVGLTSESSIKYHIWLGHLSMMLEWSKTYVSNVAGEIASLIALAMWITSIPRIRRKMYEVFFYTHHLYILYILFYAIHAGVASMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARLLPCLYYNPTSLVFINVPKVSKLQWHPFTVTSSCNMETNYLSIAIKNVGSWSNKLYQELSSSTLDHLNISVEGPYGPHTAQFLRHEQIVMVSGGSGVTPFISIIRDLIFQSQQQEFQPPKLILVCIFKSYADLTMLDLMLPVSGSTAQISQLQLQIEAYITREKEQPSRDANKQIKTIWFKTNLSDSPISGVLGPNNWLWLGAIITSSFIMFLLFLGIVTRYYIYPIENNSEILFECEGKDVGVMTCGPRKMRHEVARICASGLADNLHFESISFNW*