AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1426690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426690 MtrunA17_Chr2g0320641 86.335 483 27 3 1 483 1 444 0.0 813
Msa1426690 MtrunA17_Chr8g0380621 22.951 366 242 8 138 483 75 420 1.53e-18 87.8
Msa1426690 MtrunA17_Chr8g0384941 26.440 382 231 11 129 472 43 412 1.55e-15 78.6
Msa1426690 MtrunA17_Chr1g0187901 25.613 367 234 9 129 474 33 381 7.28e-15 76.3
Msa1426690 MtrunA17_Chr1g0165861 25.389 193 124 5 290 470 7 191 3.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426690 AT5G22830.1 71.159 371 73 3 113 483 123 459 2.23e-172 493
Msa1426690 AT5G22830.2 71.159 371 73 3 113 483 123 459 2.23e-172 493
Msa1426690 AT5G09690.1 24.156 385 238 7 123 483 30 384 5.04e-20 92.4
Msa1426690 AT5G09690.2 24.031 387 236 8 123 483 41 395 5.43e-20 92.4
Msa1426690 AT5G09690.12 23.656 372 223 6 123 471 41 374 3.10e-18 87.0
Msa1426690 AT5G64560.1 25.538 372 231 10 136 482 41 391 1.28e-16 82.0
Msa1426690 AT1G80900.2 24.265 408 242 9 123 483 54 441 1.65e-15 79.0
Msa1426690 AT1G80900.1 24.265 408 242 9 123 483 54 441 1.65e-15 79.0
Msa1426690 AT1G16010.3 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1426690 AT1G16010.1 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1426690 AT1G16010.2 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1426690 AT4G28580.1 20.161 372 238 10 137 483 70 407 4.45e-12 68.2

Find 164 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTATAGCTGTCAGTTTA+AGG 0.106735 tig0026063:+10161 Msa1426690:CDS
TTCATGATTTCAGGCATATT+TGG 0.179020 tig0026063:+11306 Msa1426690:intron
GCAGATGCTGCTTGATCTTC+TGG 0.217701 tig0026063:+9399 Msa1426690:CDS
AATACGGAGGATATGTATTA+TGG 0.232489 tig0026063:+9435 Msa1426690:CDS
ACCACATCTGGGATTATTAT+TGG 0.241757 tig0026063:+11486 Msa1426690:CDS
ATTTAATGCAGTTTGCATTT+TGG 0.259440 tig0026063:+11460 Msa1426690:intron
ATGAATAATTTATCCGGATT+TGG 0.261474 tig0026063:-5281 None:intergenic
TTCACTTTAGTTGATAATAT+TGG 0.271055 tig0026063:+12381 Msa1426690:three_prime_UTR
GGCCCTCCATTGTTGCTCTT+GGG 0.287052 tig0026063:-7277 None:intergenic
GCCTTACCAAATCGGATAAC+TGG 0.292260 tig0026063:+9218 Msa1426690:CDS
TGGCCCTCCATTGTTGCTCT+TGG 0.305119 tig0026063:-7278 None:intergenic
TACTTATATTTGATTATAAT+CGG 0.307648 tig0026063:+7093 Msa1426690:CDS
GCACTGAGCATTCCACATTA+TGG 0.309684 tig0026063:-9486 None:intergenic
AGGATTGCAACCACCTCTTC+TGG 0.321443 tig0026063:+5711 Msa1426690:CDS
TACCAACCTTGTTCCGTTCC+CGG 0.326223 tig0026063:+5337 Msa1426690:five_prime_UTR
TCAATCTACGGAAATGGATT+TGG 0.328492 tig0026063:+12078 Msa1426690:three_prime_UTR
AAATTCAATGCCTTCTTTGC+TGG 0.336908 tig0026063:+6671 Msa1426690:CDS
CTTAGAACCTCGTGTGAGTA+TGG 0.342447 tig0026063:+8476 Msa1426690:CDS
CATATCCTCCGTATTTCATC+TGG 0.346335 tig0026063:-9427 None:intergenic
GGAGGAAATTGAGATGCTTC+TGG 0.351803 tig0026063:+9642 Msa1426690:CDS
TCGATTTCAAATGGCATTGA+TGG 0.352449 tig0026063:-7298 None:intergenic
CCAAATTGCTAGGTTGAGTT+AGG 0.366760 tig0026063:+9355 Msa1426690:intron
TCTTGATTCTGCAAGGGAAA+TGG 0.368944 tig0026063:+10135 Msa1426690:CDS
ATATCCCCAGTTATCCGATT+TGG 0.369292 tig0026063:-9224 None:intergenic
GGAATCAGACGCGACGGTTT+CGG 0.372599 tig0026063:-5622 None:intergenic
ACTGCTTCACAGGTTCATAA+TGG 0.379206 tig0026063:+12198 Msa1426690:intron
TCGGATAACTGGGGATATAC+TGG 0.379701 tig0026063:+9229 Msa1426690:CDS
CGCTAGGTTGTTGCTTGTGT+GGG 0.382031 tig0026063:+12255 Msa1426690:three_prime_UTR
AGAAATTGTACAATAAATAA+AGG 0.382181 tig0026063:+9460 Msa1426690:CDS
CAAAGATCAATCTACGGAAA+TGG 0.393215 tig0026063:+12072 Msa1426690:three_prime_UTR
GCTTTCAAGAATACAACGTT+TGG 0.393821 tig0026063:+8437 Msa1426690:CDS
ACCATAATAAAACAGGTATC+TGG 0.398082 tig0026063:+12513 Msa1426690:three_prime_UTR
ATCTGGCTCCATTAATTGTT+GGG 0.403216 tig0026063:+12530 Msa1426690:three_prime_UTR
CCTAGCGAAGAGTCTCTTGA+TGG 0.410988 tig0026063:-12239 None:intergenic
TCAGACGAAACTTCAAATAT+AGG 0.411397 tig0026063:+11567 Msa1426690:three_prime_UTR
GCCCTCCATTGTTGCTCTTG+GGG 0.412124 tig0026063:-7276 None:intergenic
TTTAATTTCTTCGTAAGGAT+TGG 0.415238 tig0026063:-12474 None:intergenic
TTCTTGAGGCCTTACCAAAT+CGG 0.421971 tig0026063:+9210 Msa1426690:CDS
ATAGAACGAACTTCATAAAC+AGG 0.428110 tig0026063:-5762 None:intergenic
CACGGAGGCTTGAAGTTAGC+AGG 0.431686 tig0026063:+10664 Msa1426690:CDS
GTTCCTCAAGATAGGACTTC+AGG 0.433942 tig0026063:-11335 None:intergenic
AGTGGCGACGGTGGAGGTTA+CGG 0.436072 tig0026063:-5372 None:intergenic
ATCCATGCACTGCGTGACTC+TGG 0.443866 tig0026063:-12447 None:intergenic
TCGTATTAGCAAACAAACTT+TGG 0.451649 tig0026063:+9259 Msa1426690:CDS
AAATGCATGAATAATTTATC+CGG 0.456117 tig0026063:-5287 None:intergenic
GTATGCTATACTTCTAAACT+TGG 0.456498 tig0026063:+7037 Msa1426690:CDS
TATCTGGCTCCATTAATTGT+TGG 0.458068 tig0026063:+12529 Msa1426690:three_prime_UTR
GTGCACAATCACTGCATTTG+TGG 0.458974 tig0026063:-12050 None:intergenic
CAACAGACCTCGATTTCAAA+TGG 0.463876 tig0026063:-7307 None:intergenic
TTATTCAGGTCTTCGTCCAC+GGG 0.464836 tig0026063:+6614 Msa1426690:intron
CAGGGTGGAACTGCTTCTCC+AGG 0.465720 tig0026063:+10683 Msa1426690:CDS
TTCTAGAGTCATTGCTGCCT+CGG 0.468702 tig0026063:+7248 Msa1426690:CDS
TGCACAATCACTGCATTTGT+GGG 0.470159 tig0026063:-12049 None:intergenic
CTCAGTGCCTTTAGACAAGC+AGG 0.471829 tig0026063:+9501 Msa1426690:CDS
ATACGGAGGATATGTATTAT+GGG 0.472338 tig0026063:+9436 Msa1426690:CDS
TCTTGTGAAAGTTTGAATGA+TGG 0.472966 tig0026063:+12568 Msa1426690:three_prime_UTR
AATTATTTAATTTCTTCGTA+AGG 0.478443 tig0026063:-12479 None:intergenic
AGATATTATACCAGCAAAGA+AGG 0.478493 tig0026063:-6681 None:intergenic
CAAAATATGTACCTGCTACA+AGG 0.478564 tig0026063:-10734 None:intergenic
GCAGTTGGTGCCCTTGTAGC+AGG 0.482970 tig0026063:+10723 Msa1426690:CDS
CATTTCACCGGCTTGAGCGC+CGG 0.483931 tig0026063:-5558 None:intergenic
GATTTACACCATAATAAAAC+AGG 0.490449 tig0026063:+12506 Msa1426690:three_prime_UTR
CCCAGTTATCCGATTTGGTA+AGG 0.493190 tig0026063:-9219 None:intergenic
GCTCAAGGGCAGGAGCTCTC+AGG 0.495202 tig0026063:+9377 Msa1426690:CDS
AAAGGTTGGAAGCGAAAGTG+AGG 0.504236 tig0026063:-5432 None:intergenic
TTCATCATCAACAGCTTCAT+CGG 0.505527 tig0026063:-5643 None:intergenic
ATTATTCAGGTCTTCGTCCA+CGG 0.515753 tig0026063:+6613 Msa1426690:intron
TCGGTTTCAGCGTCGTTCCA+CGG 0.517395 tig0026063:-5603 None:intergenic
TGCATGCCGGGAACGGAACA+AGG 0.518041 tig0026063:-5343 None:intergenic
GTTGTAGAAGTGAAATCAGA+TGG 0.519105 tig0026063:+5997 Msa1426690:CDS
TCGCTAGGTTGTTGCTTGTG+TGG 0.519298 tig0026063:+12254 Msa1426690:three_prime_UTR
CCTTACCAAATCGGATAACT+GGG 0.519888 tig0026063:+9219 Msa1426690:CDS
ACTTCTGAATTTAACTAACA+TGG 0.520719 tig0026063:+5392 Msa1426690:exon
TCAGCAACCTGCTTGTCTAA+AGG 0.527323 tig0026063:-9508 None:intergenic
GAAGAGGTGGTTGCAATCCT+CGG 0.527378 tig0026063:-5708 None:intergenic
TTCTGGAAAATTATCTCCAA+AGG 0.529417 tig0026063:+9659 Msa1426690:CDS
TGGAGGACCCAGATGAAATA+CGG 0.529419 tig0026063:+9419 Msa1426690:CDS
ATCATCGCCGGCGCTCAAGC+CGG 0.529485 tig0026063:+5551 Msa1426690:CDS
CACCACACGTTCCTCAAGAT+AGG 0.530197 tig0026063:-11343 None:intergenic
GTCCAGAGTCACGCAGTGCA+TGG 0.530398 tig0026063:+12445 Msa1426690:three_prime_UTR
GGAACATTCTGTGTGGCAGT+TGG 0.533059 tig0026063:+10708 Msa1426690:CDS
CTCATGATATGTAGAGGAGG+AGG 0.534424 tig0026063:+9621 Msa1426690:intron
AACGGAACAAGGTTGGTAGT+TGG 0.534970 tig0026063:-5332 None:intergenic
GTGGATCTACTGCATTTCAC+CGG 0.543097 tig0026063:-5570 None:intergenic
TTCAGAAGTGGCGACGGTGG+AGG 0.543793 tig0026063:-5378 None:intergenic
GTGAGAGATTCGTGGAATTG+TGG 0.544397 tig0026063:-5498 None:intergenic
AAAATATGTACCTGCTACAA+GGG 0.544963 tig0026063:-10733 None:intergenic
AATCTCTCACTCTTCTTCGC+CGG 0.546307 tig0026063:+5511 Msa1426690:CDS
AAAGGCTTCTTGATTCTGCA+AGG 0.546966 tig0026063:+10128 Msa1426690:CDS
CGGTGAGGTCGGAGAAGAAG+AGG 0.549065 tig0026063:-5473 None:intergenic
ATGATATGTAGAGGAGGAGG+AGG 0.550490 tig0026063:+9624 Msa1426690:intron
CTTGTCACGGTCAAGCTGAA+AGG 0.554270 tig0026063:+10110 Msa1426690:CDS
GTCGGAGAAGAAGAGGTAGT+TGG 0.555331 tig0026063:-5466 None:intergenic
GTGGAACTGCTTCTCCAGGT+TGG 0.558353 tig0026063:+10687 Msa1426690:CDS
TCTGGAGATTCTCTATCGCT+CGG 0.560572 tig0026063:+5729 Msa1426690:CDS
GTTGAGTTAGGCTCAAGGGC+AGG 0.569703 tig0026063:+9367 Msa1426690:CDS
TTTAGACAAGCAGGTTGCTG+AGG 0.573002 tig0026063:+9510 Msa1426690:CDS
TATGCTATACTTCTAAACTT+GGG 0.574188 tig0026063:+7038 Msa1426690:CDS
TTAAACCCCAAGAGCAACAA+TGG 0.574463 tig0026063:+7271 Msa1426690:CDS
ATCAATGCCATTTGAAATCG+AGG 0.574990 tig0026063:+7300 Msa1426690:CDS
ACCCCAAGAGCAACAATGGA+GGG 0.575827 tig0026063:+7275 Msa1426690:CDS
ACATCTGGGATTATTATTGG+TGG 0.576146 tig0026063:+11489 Msa1426690:CDS
CTAGGTTGAGTTAGGCTCAA+GGG 0.577286 tig0026063:+9363 Msa1426690:intron
TAGTTGGTGCGCGTGAGGAA+AGG 0.579052 tig0026063:-5450 None:intergenic
AGTGTAAAAGACGACGCAGA+AGG 0.580230 tig0026063:+8027 Msa1426690:CDS
ATGTTAGTTAAATTCAGAAG+TGG 0.580810 tig0026063:-5390 None:intergenic
AGATTCGTGGAATTGTGGTT+CGG 0.582093 tig0026063:-5493 None:intergenic
GCTAGGTTGAGTTAGGCTCA+AGG 0.583177 tig0026063:+9362 Msa1426690:intron
CAAGAATACAACGTTTGGAG+CGG 0.585508 tig0026063:+8442 Msa1426690:CDS
ACGTTTGGAGCGGAGACTGA+TGG 0.587474 tig0026063:+8452 Msa1426690:CDS
GAGCGCCGGCGATGATGTAA+CGG 0.587494 tig0026063:-5544 None:intergenic
ACCAATAATAATCCCAGATG+TGG 0.587896 tig0026063:-11487 None:intergenic
TGCCGGGAACGGAACAAGGT+TGG 0.588656 tig0026063:-5339 None:intergenic
AACTTTCACAAGAACTCGGT+AGG 0.589539 tig0026063:-12558 None:intergenic
GAATTGTGGTTCGGTGAGGT+CGG 0.590714 tig0026063:-5484 None:intergenic
AGAGGTAGTTGGTGCGCGTG+AGG 0.591230 tig0026063:-5455 None:intergenic
CCACACAGAATGTTCCAACC+TGG 0.592527 tig0026063:-10701 None:intergenic
CCATCAAGAGACTCTTCGCT+AGG 0.592834 tig0026063:+12239 Msa1426690:three_prime_UTR
CTAGGTTCAAGCTCTTCTTG+AGG 0.592984 tig0026063:+9196 Msa1426690:intron
GATGGAGAAAGAATACAGAC+TGG 0.594103 tig0026063:+12586 Msa1426690:three_prime_UTR
AAGGCTTCTTGATTCTGCAA+GGG 0.595349 tig0026063:+10129 Msa1426690:CDS
GTTAAATTCAGAAGTGGCGA+CGG 0.598296 tig0026063:-5384 None:intergenic
TGGTGCGCGTGAGGAAAGGT+TGG 0.598690 tig0026063:-5446 None:intergenic
GACGCAGAAGGATCTAAAGA+TGG 0.601591 tig0026063:+8039 Msa1426690:CDS
TGTGCACAAAGATCAATCTA+CGG 0.603651 tig0026063:+12066 Msa1426690:three_prime_UTR
TTAGACAAGCAGGTTGCTGA+GGG 0.603811 tig0026063:+9511 Msa1426690:CDS
TTCAAACTTTCACAAGAACT+CGG 0.604203 tig0026063:-12562 None:intergenic
TGTATAACTACCTCAGAGCA+AGG 0.605896 tig0026063:+11532 Msa1426690:CDS
GAAGAAGAGTGAGAGATTCG+TGG 0.609323 tig0026063:-5506 None:intergenic
GAGTCACGCAGTGCATGGAT+CGG 0.611874 tig0026063:+12450 Msa1426690:three_prime_UTR
AATCTCCGTTACATCATCGC+CGG 0.612622 tig0026063:+5539 Msa1426690:CDS
AAATAAAGGAAACCATAATG+TGG 0.613910 tig0026063:+9474 Msa1426690:CDS
AGACAATTATTGAAGTCTAG+TGG 0.615214 tig0026063:+6048 Msa1426690:CDS
GATGCTGCTTGATCTTCTGG+AGG 0.616845 tig0026063:+9402 Msa1426690:CDS
ATATCCTCCGTATTTCATCT+GGG 0.617091 tig0026063:-9426 None:intergenic
GAACCTGAAGTCCTATCTTG+AGG 0.617632 tig0026063:+11332 Msa1426690:CDS
GGTAACAATTCCATTGCAGA+AGG 0.618379 tig0026063:+8060 Msa1426690:CDS
CGTGGAATTGTGGTTCGGTG+AGG 0.623398 tig0026063:-5488 None:intergenic
TTGTAGAAGTGAAATCAGAT+GGG 0.624691 tig0026063:+5998 Msa1426690:CDS
TCCACGGGACGTTAGAAGTG+TGG 0.625060 tig0026063:+6629 Msa1426690:CDS
TTTACATAAGAACTGCATGA+AGG 0.625107 tig0026063:+12336 Msa1426690:three_prime_UTR
TCCACACTTCTAACGTCCCG+TGG 0.632114 tig0026063:-6630 None:intergenic
AAATTCAGAAGTGGCGACGG+TGG 0.632676 tig0026063:-5381 None:intergenic
TTCATCGGAATCAGACGCGA+CGG 0.634341 tig0026063:-5628 None:intergenic
GCTGTTGATGATGAATCAAA+CGG 0.636421 tig0026063:+5651 Msa1426690:CDS
TGCAGATGTGAATCTTGTCA+CGG 0.638670 tig0026063:+10097 Msa1426690:intron
AACCCCAAGAGCAACAATGG+AGG 0.639651 tig0026063:+7274 Msa1426690:CDS
CGATAGAGAATCTCCAGAAG+AGG 0.640168 tig0026063:-5724 None:intergenic
GGCGACGGTGGAGGTTACGG+TGG 0.641123 tig0026063:-5369 None:intergenic
TAGAGAATCTCCAGAAGAGG+TGG 0.641979 tig0026063:-5721 None:intergenic
ACGGAGGCTTGAAGTTAGCA+GGG 0.650280 tig0026063:+10665 Msa1426690:CDS
CTTCTTCAATAGAGTCTCCG+AGG 0.650707 tig0026063:+5691 Msa1426690:CDS
GGTGAAATGCAGTAGATCCA+CGG 0.652611 tig0026063:+5572 Msa1426690:CDS
TTGCTCTTGGGGTTTAACCG+AGG 0.658451 tig0026063:-7265 None:intergenic
GATCCACGGAAGAAAAGCCG+TGG 0.662772 tig0026063:+5586 Msa1426690:CDS
CCAGGTTGGAACATTCTGTG+TGG 0.669557 tig0026063:+10701 Msa1426690:CDS
GCAGAAGGCCAAGAAAAGTG+TGG 0.677081 tig0026063:+8075 Msa1426690:CDS
TTAGAAGTATAGCATACTCA+CGG 0.677451 tig0026063:-7031 None:intergenic
GTCCTATCTTGAGGAACGTG+TGG 0.678140 tig0026063:+11341 Msa1426690:CDS
TTCCATTCAACAGCTCACGG+AGG 0.732721 tig0026063:+10649 Msa1426690:intron
TGTGTTTCCATACTCACACG+AGG 0.733801 tig0026063:-8483 None:intergenic
GAGGCTTGAAGTTAGCAGGG+TGG 0.735608 tig0026063:+10668 Msa1426690:CDS
CTTACCAAATCGGATAACTG+GGG 0.745411 tig0026063:+9220 Msa1426690:CDS
AGGACCCAGATGAAATACGG+AGG 0.746792 tig0026063:+9422 Msa1426690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATAATTTTATTTTGAT+TGG + tig0026063:6435-6454 Msa1426690:intron 10.0%
!! TACTTATATTTGATTATAAT+CGG + tig0026063:7093-7112 Msa1426690:CDS 10.0%
!!! AAAAAATGATTTTAAGATTA+TGG + tig0026063:8789-8808 Msa1426690:intron 10.0%
!! AATATTATACTATTATACTA+TGG - tig0026063:10421-10440 None:intergenic 10.0%
!! TGAATAATTTAAATTAAGTT+TGG - tig0026063:10817-10836 None:intergenic 10.0%
!!! TATTATTTGATGGATTTTAT+AGG - tig0026063:5249-5268 None:intergenic 15.0%
!! AATAATAAAAAAACCAAATC+CGG + tig0026063:5268-5287 Msa1426690:five_prime_UTR 15.0%
!! ACATTGTGATTATTATATTT+GGG - tig0026063:6321-6340 None:intergenic 15.0%
!! AACATTGTGATTATTATATT+TGG - tig0026063:6322-6341 None:intergenic 15.0%
!! CTGAAATAATTCATATATTA+TGG + tig0026063:7128-7147 Msa1426690:intron 15.0%
!! ACAAAAGAAAAATTTGAAAA+TGG + tig0026063:7500-7519 Msa1426690:intron 15.0%
!! AAATAAAACTTATTTGAACA+CGG + tig0026063:7754-7773 Msa1426690:intron 15.0%
!!! TCATTCATAATTTTATTTTG+AGG + tig0026063:7856-7875 Msa1426690:intron 15.0%
!!! CATTCATAATTTTATTTTGA+GGG + tig0026063:7857-7876 Msa1426690:intron 15.0%
!!! TCAGTTTTTTTTTTTAAAGA+GGG - tig0026063:8219-8238 None:intergenic 15.0%
!!! TTCAGTTTTTTTTTTTAAAG+AGG - tig0026063:8220-8239 None:intergenic 15.0%
!!! TCTTTAAAAAAAAAAACTGA+AGG + tig0026063:8219-8238 Msa1426690:intron 15.0%
!!! ATTACATATTTTTATTAGCA+TGG + tig0026063:8748-8767 Msa1426690:intron 15.0%
!!! TTCAACTTTATTTTTTTACA+AGG + tig0026063:8919-8938 Msa1426690:intron 15.0%
!!! TACTCTAAAATATTTCAATA+AGG - tig0026063:9066-9085 None:intergenic 15.0%
!! AGAAATTGTACAATAAATAA+AGG + tig0026063:9460-9479 Msa1426690:CDS 15.0%
!! GTATAATATTATTACATTCA+AGG + tig0026063:10431-10450 Msa1426690:intron 15.0%
!! TTAAGTTTGGTTAAAATTAT+GGG - tig0026063:10804-10823 None:intergenic 15.0%
!! ATTAAGTTTGGTTAAAATTA+TGG - tig0026063:10805-10824 None:intergenic 15.0%
!!! GTTAATTATAAATTTGTTAG+TGG + tig0026063:10908-10927 Msa1426690:intron 15.0%
!! AATAAAAATACATTAAGAAG+AGG - tig0026063:11632-11651 None:intergenic 15.0%
!! ATCTATTCATCTTATTATTT+AGG - tig0026063:11746-11765 None:intergenic 15.0%
!!! AATTATTTAATTTCTTCGTA+AGG - tig0026063:12482-12501 None:intergenic 15.0%
!! AAATGCATGAATAATTTATC+CGG - tig0026063:5290-5309 None:intergenic 20.0%
!! ATTACTATGAAATTATGTTG+TGG + tig0026063:5802-5821 Msa1426690:intron 20.0%
!! AACTCAAATTCAATTCAAAT+AGG + tig0026063:6378-6397 Msa1426690:intron 20.0%
!! ATGATATAAATATGTTAGCA+GGG - tig0026063:6563-6582 None:intergenic 20.0%
!! AATGATATAAATATGTTAGC+AGG - tig0026063:6564-6583 None:intergenic 20.0%
!! TATCATTTCTTAATACCTTA+TGG + tig0026063:6713-6732 Msa1426690:intron 20.0%
!!! TTAATTTTTATGAGTGTGAT+TGG - tig0026063:6911-6930 None:intergenic 20.0%
!! TCAATAATTAGCGTATTAAA+TGG - tig0026063:7345-7364 None:intergenic 20.0%
!!! TTATGACAATATGTTGATTT+TGG + tig0026063:7463-7482 Msa1426690:intron 20.0%
!! TATACTTAAGTATGCATTTA+TGG + tig0026063:7909-7928 Msa1426690:intron 20.0%
!! CAAAAACTGGTAAAAATTTA+TGG + tig0026063:8626-8645 Msa1426690:intron 20.0%
!!! TTCTAATTTTCTTAAGATCT+TGG - tig0026063:8950-8969 None:intergenic 20.0%
!!! TGAAAGATTACTTTTACTTA+GGG - tig0026063:8986-9005 None:intergenic 20.0%
!!! ATGAAAGATTACTTTTACTT+AGG - tig0026063:8987-9006 None:intergenic 20.0%
!!! TCTAAAATATTTCAATAAGG+AGG - tig0026063:9063-9082 None:intergenic 20.0%
!! AGAAAAAGTTATTCAAATCA+GGG - tig0026063:9157-9176 None:intergenic 20.0%
!! TTAAACTCTTGCAATTAAAA+TGG + tig0026063:10487-10506 Msa1426690:intron 20.0%
!! CAAAGTTATTAGAACAAATA+AGG - tig0026063:10628-10647 None:intergenic 20.0%
!! CTTATTTGTTCTAATAACTT+TGG + tig0026063:10626-10645 Msa1426690:intron 20.0%
!!! TTATAAATTTGTTAGTGGTT+TGG + tig0026063:10913-10932 Msa1426690:intron 20.0%
!!! AGAATATTTTGATATAGATC+AGG - tig0026063:11286-11305 None:intergenic 20.0%
!! AAATATTCTTTCATGATTTC+AGG + tig0026063:11297-11316 Msa1426690:intron 20.0%
!! TGTTAAATTAACCATATTTG+TGG + tig0026063:11437-11456 Msa1426690:intron 20.0%
!! ACTTAATCTATAAACAATTC+AGG + tig0026063:11862-11881 Msa1426690:intron 20.0%
!!! CAGGTTATTTTAAAATATGA+AGG + tig0026063:12016-12035 Msa1426690:intron 20.0%
!!! TTCACTTTAGTTGATAATAT+TGG + tig0026063:12381-12400 Msa1426690:three_prime_UTR 20.0%
!!! TATGATCAAGTGAATTTTTA+GGG + tig0026063:12409-12428 Msa1426690:three_prime_UTR 20.0%
! ATGAATAATTTATCCGGATT+TGG - tig0026063:5284-5303 None:intergenic 25.0%
! ATGTTAGTTAAATTCAGAAG+TGG - tig0026063:5393-5412 None:intergenic 25.0%
! ACTTCTGAATTTAACTAACA+TGG + tig0026063:5392-5411 Msa1426690:exon 25.0%
! GAAGATAAAACTAATTAAGC+AGG + tig0026063:5885-5904 Msa1426690:intron 25.0%
! ATAAAATAGAAGACTACATG+AGG - tig0026063:6474-6493 None:intergenic 25.0%
! TCGTAAAAAATAAAAGCAGA+TGG - tig0026063:6515-6534 None:intergenic 25.0%
! GAATTTGTCAAAAACAATGA+TGG - tig0026063:6657-6676 None:intergenic 25.0%
! GTATTAAGAAATGATAGAGT+GGG - tig0026063:6709-6728 None:intergenic 25.0%
! CATTGTTTATAAGTACCATA+AGG - tig0026063:6731-6750 None:intergenic 25.0%
! CTTATGGTACTTATAAACAA+TGG + tig0026063:6729-6748 Msa1426690:intron 25.0%
!! TTTTATTAGCAGCATAACAT+AGG - tig0026063:6883-6902 None:intergenic 25.0%
! TATGCTATACTTCTAAACTT+GGG + tig0026063:7038-7057 Msa1426690:CDS 25.0%
!!! TATTGATTTTTCACCAGTAA+AGG + tig0026063:7214-7233 Msa1426690:intron 25.0%
! AATACGCTAATTATTGAATC+AGG + tig0026063:7348-7367 Msa1426690:intron 25.0%
! ATACGCTAATTATTGAATCA+GGG + tig0026063:7349-7368 Msa1426690:intron 25.0%
!! AAATTTTTCTTTTGTCAGAC+AGG - tig0026063:7495-7514 None:intergenic 25.0%
!! TTGAAAATGGTTTCTTTTCA+AGG + tig0026063:7513-7532 Msa1426690:intron 25.0%
!! TGAAAATGGTTTCTTTTCAA+GGG + tig0026063:7514-7533 Msa1426690:intron 25.0%
!! TTTTGTCTCATTAGAACAAA+TGG - tig0026063:7600-7619 None:intergenic 25.0%
!!! TAATTTTATTTTGAGGGATG+AGG + tig0026063:7863-7882 Msa1426690:intron 25.0%
! TTCCTATATACTTTCTCTAA+TGG - tig0026063:8121-8140 None:intergenic 25.0%
!! CCAAAAATCATAACCATTTT+GGG - tig0026063:8144-8163 None:intergenic 25.0%
!! CCAAAATGGTTATGATTTTT+GGG + tig0026063:8142-8161 Msa1426690:intron 25.0%
!! CAAAATGGTTATGATTTTTG+GGG + tig0026063:8143-8162 Msa1426690:intron 25.0%
!!! GAGTAGATTTTCAAGTAATT+GGG + tig0026063:8165-8184 Msa1426690:intron 25.0%
!!! AGTAGATTTTCAAGTAATTG+GGG + tig0026063:8166-8185 Msa1426690:intron 25.0%
!! TGTTCTCATTTTGTATGTTA+GGG + tig0026063:8305-8324 Msa1426690:intron 25.0%
! AAATTCAACCATGGTAATTA+GGG - tig0026063:8396-8415 None:intergenic 25.0%
! AAAATTCAACCATGGTAATT+AGG - tig0026063:8397-8416 None:intergenic 25.0%
! ATGTTTATGTTCATTCTTTG+TGG + tig0026063:8520-8539 Msa1426690:intron 25.0%
! ATTATAAATGCATTTCACGA+TGG + tig0026063:8722-8741 Msa1426690:intron 25.0%
!!! AGTGTTTTTTTTTAGAGCTT+TGG + tig0026063:8816-8835 Msa1426690:intron 25.0%
!!! AAAGATTACTTTTACTTAGG+GGG - tig0026063:8984-9003 None:intergenic 25.0%
!!! GAAAGATTACTTTTACTTAG+GGG - tig0026063:8985-9004 None:intergenic 25.0%
! GAGAAAAAGTTATTCAAATC+AGG - tig0026063:9158-9177 None:intergenic 25.0%
!! TTTTTCTCATTAATCTTCAG+CGG + tig0026063:9296-9315 Msa1426690:intron 25.0%
! AAATAAAGGAAACCATAATG+TGG + tig0026063:9474-9493 Msa1426690:CDS 25.0%
!!! TTTTTTCTCATGATATGTAG+AGG + tig0026063:9615-9634 Msa1426690:intron 25.0%
!!! GAATTTCTTTTTTCTCTCTT+CGG + tig0026063:10187-10206 Msa1426690:intron 25.0%
! TTTGACAAAGTATGTGAAAT+AGG + tig0026063:10765-10784 Msa1426690:intron 25.0%
! AAATTATTCACAATCTAGTC+TGG + tig0026063:10827-10846 Msa1426690:intron 25.0%
! GTTTAATATACTTTCCATGA+AGG + tig0026063:11105-11124 Msa1426690:intron 25.0%
!! GTGGAAAAAATATGAACTTT+TGG + tig0026063:11179-11198 Msa1426690:intron 25.0%
!! ATTTAATGCAGTTTGCATTT+TGG + tig0026063:11460-11479 Msa1426690:intron 25.0%
! AAAAATACATTAAGAAGAGG+AGG - tig0026063:11629-11648 None:intergenic 25.0%
!! ATTTAAAGTAAGCTTTCAAG+TGG + tig0026063:11824-11843 Msa1426690:intron 25.0%
!! GTATGATCAAGTGAATTTTT+AGG + tig0026063:12408-12427 Msa1426690:three_prime_UTR 25.0%
!! TTTAATTTCTTCGTAAGGAT+TGG - tig0026063:12477-12496 None:intergenic 25.0%
! GATTTACACCATAATAAAAC+AGG + tig0026063:12506-12525 Msa1426690:three_prime_UTR 25.0%
! TCTATTGAAGAAGTTTTGCT+CGG - tig0026063:5684-5703 None:intergenic 30.0%
ATAGAACGAACTTCATAAAC+AGG - tig0026063:5765-5784 None:intergenic 30.0%
GTTCAATGAACTAAAACCAT+AGG + tig0026063:5857-5876 Msa1426690:intron 30.0%
TGAACTAAAACCATAGGATT+AGG + tig0026063:5863-5882 Msa1426690:intron 30.0%
! GTTTTATCTTCCTAATCCTA+TGG - tig0026063:5876-5895 None:intergenic 30.0%
TCTAAATTTGTGAATCGTGA+AGG + tig0026063:5975-5994 Msa1426690:intron 30.0%
TTGTAGAAGTGAAATCAGAT+GGG + tig0026063:5998-6017 Msa1426690:CDS 30.0%
AGACAATTATTGAAGTCTAG+TGG + tig0026063:6048-6067 Msa1426690:CDS 30.0%
GAGCTTATGAAAAGAACATA+TGG - tig0026063:6297-6316 None:intergenic 30.0%
AGATATTATACCAGCAAAGA+AGG - tig0026063:6684-6703 None:intergenic 30.0%
GGTATTAAGAAATGATAGAG+TGG - tig0026063:6710-6729 None:intergenic 30.0%
! TTAGAAGTATAGCATACTCA+CGG - tig0026063:7034-7053 None:intergenic 30.0%
GTATGCTATACTTCTAAACT+TGG + tig0026063:7037-7056 Msa1426690:CDS 30.0%
!! TGTCGTTATTTCTGTGATAA+AGG + tig0026063:7161-7180 Msa1426690:intron 30.0%
!! GTCGTTATTTCTGTGATAAA+GGG + tig0026063:7162-7181 Msa1426690:intron 30.0%
!! TCGTTATTTCTGTGATAAAG+GGG + tig0026063:7163-7182 Msa1426690:intron 30.0%
TACTGGTGAAAAATCAATAG+AGG - tig0026063:7213-7232 None:intergenic 30.0%
TACGCTAATTATTGAATCAG+GGG + tig0026063:7350-7369 Msa1426690:intron 30.0%
GATATAGCAGAAAATGAGTT+AGG - tig0026063:7442-7461 None:intergenic 30.0%
!! TACTGCTATTAAGTTGATTC+AGG - tig0026063:7565-7584 None:intergenic 30.0%
GAAATATGATAGTTACACTC+AGG + tig0026063:7793-7812 Msa1426690:intron 30.0%
! TGCCATTAGAGAAAGTATAT+AGG + tig0026063:8116-8135 Msa1426690:intron 30.0%
AAGTATATAGGAACCCAAAA+TGG + tig0026063:8128-8147 Msa1426690:intron 30.0%
! CCCAAAATGGTTATGATTTT+TGG + tig0026063:8141-8160 Msa1426690:intron 30.0%
! CCCAAAAATCATAACCATTT+TGG - tig0026063:8145-8164 None:intergenic 30.0%
!!! GGAGTAGATTTTCAAGTAAT+TGG + tig0026063:8164-8183 Msa1426690:intron 30.0%
CTAACATTTATATGACCAGT+TGG + tig0026063:8264-8283 Msa1426690:intron 30.0%
! GTGTTCTCATTTTGTATGTT+AGG + tig0026063:8304-8323 Msa1426690:intron 30.0%
AATTCAACCATGGTAATTAG+GGG - tig0026063:8395-8414 None:intergenic 30.0%
! ATTACCATGGTTGAATTTTC+AGG + tig0026063:8398-8417 Msa1426690:intron 30.0%
AATTTGCCTATTTGTTCCTA+TGG + tig0026063:8567-8586 Msa1426690:intron 30.0%
!!! CATAGAAGCTATTTTTCATG+TGG + tig0026063:8839-8858 Msa1426690:intron 30.0%
TTTCTATAGCATATGTCTAG+TGG + tig0026063:9031-9050 Msa1426690:intron 30.0%
TATAATCTGTTATGAACCGA+AGG - tig0026063:9102-9121 None:intergenic 30.0%
TCGTATTAGCAAACAAACTT+TGG + tig0026063:9259-9278 Msa1426690:CDS 30.0%
AATACGGAGGATATGTATTA+TGG + tig0026063:9435-9454 Msa1426690:CDS 30.0%
ATACGGAGGATATGTATTAT+GGG + tig0026063:9436-9455 Msa1426690:CDS 30.0%
! TTCTGGAAAATTATCTCCAA+AGG + tig0026063:9659-9678 Msa1426690:CDS 30.0%
! TTTGGAATGAGAATAACCTT+TGG - tig0026063:9678-9697 None:intergenic 30.0%
TGATACGTAATGCACAAATT+TGG - tig0026063:9696-9715 None:intergenic 30.0%
! TAATAGTCAAAGCACTAACA+TGG + tig0026063:9830-9849 Msa1426690:intron 30.0%
AAGTAAAGGCTTAAGATTCT+TGG - tig0026063:9878-9897 None:intergenic 30.0%
AGGATGTTAATGGTAAGTAA+AGG - tig0026063:9892-9911 None:intergenic 30.0%
ATTCTATAGCTGTCAGTTTA+AGG + tig0026063:10161-10180 Msa1426690:CDS 30.0%
AGAATTGTATCAAGTGATTG+TGG + tig0026063:10225-10244 Msa1426690:intron 30.0%
! GAATCACATGATTTGATGAT+AGG + tig0026063:10263-10282 Msa1426690:intron 30.0%
! GCTAATCATGGAATTGTTTT+TGG + tig0026063:10316-10335 Msa1426690:intron 30.0%
TCCATTGTGAAGTCAAATTA+AGG + tig0026063:10354-10373 Msa1426690:intron 30.0%
! TCCTTAATTTGACTTCACAA+TGG - tig0026063:10358-10377 None:intergenic 30.0%
AAAGCTAAGCTAATGAACTA+TGG - tig0026063:10551-10570 None:intergenic 30.0%
ACAAATTTCTCTTTGCATTG+AGG - tig0026063:10576-10595 None:intergenic 30.0%
AAAATATGTACCTGCTACAA+GGG - tig0026063:10736-10755 None:intergenic 30.0%
! TTGTAGCAGGTACATATTTT+GGG + tig0026063:10736-10755 Msa1426690:intron 30.0%
GTTTGGTTAAAATTATGGGT+GGG - tig0026063:10800-10819 None:intergenic 30.0%
AGTTTGGTTAAAATTATGGG+TGG - tig0026063:10801-10820 None:intergenic 30.0%
TCACATACCAGTAATTAAAG+TGG + tig0026063:10874-10893 Msa1426690:intron 30.0%
TTTGAGTCCACTTTAATTAC+TGG - tig0026063:10884-10903 None:intergenic 30.0%
! AATTAAAGTGGACTCAAACT+TGG + tig0026063:10886-10905 Msa1426690:intron 30.0%
!! AAATTTGTTAGTGGTTTGGA+TGG + tig0026063:10917-10936 Msa1426690:intron 30.0%
!!! AGATTTTAAGAAGTGCTGTA+GGG - tig0026063:10955-10974 None:intergenic 30.0%
!!! TAGATTTTAAGAAGTGCTGT+AGG - tig0026063:10956-10975 None:intergenic 30.0%
TAACAAATGAACATGTACCT+AGG - tig0026063:11045-11064 None:intergenic 30.0%
! ATTTGCTACTACCATCATAA+TGG + tig0026063:11070-11089 Msa1426690:intron 30.0%
ACAAAATTCTGCCATTATGA+TGG - tig0026063:11084-11103 None:intergenic 30.0%
!! TAGATCTTTAAAGTCCTTCA+TGG - tig0026063:11122-11141 None:intergenic 30.0%
! GACTTTAAAGATCTAGAATC+TGG + tig0026063:11127-11146 Msa1426690:intron 30.0%
TAATATTCTCTCAATCTCTC+AGG - tig0026063:11256-11275 None:intergenic 30.0%
TTCATGATTTCAGGCATATT+TGG + tig0026063:11306-11325 Msa1426690:intron 30.0%
TATTCCATCTATGACTTACT+TGG + tig0026063:11384-11403 Msa1426690:intron 30.0%
!! ATGACTTACTTGGTTCTTTT+TGG + tig0026063:11394-11413 Msa1426690:intron 30.0%
!! TGGTTCTTTTTGGAAGTTAT+TGG + tig0026063:11404-11423 Msa1426690:intron 30.0%
CTGCATTAAATCCACAAATA+TGG - tig0026063:11451-11470 None:intergenic 30.0%
! AAAATATTTTCCTTGCTCTG+AGG - tig0026063:11545-11564 None:intergenic 30.0%
TCAGACGAAACTTCAAATAT+AGG + tig0026063:11567-11586 Msa1426690:three_prime_UTR 30.0%
TTAGAAGTAGAGGTCAAAAT+AGG - tig0026063:11919-11938 None:intergenic 30.0%
!!! TATTTTGACCTCTACTTCTA+AGG + tig0026063:11918-11937 Msa1426690:intron 30.0%
! AGCTTTTATTCTTATTCCAG+AGG + tig0026063:12152-12171 Msa1426690:intron 30.0%
! GCTTTTATTCTTATTCCAGA+GGG + tig0026063:12153-12172 Msa1426690:intron 30.0%
! CTTTTATTCTTATTCCAGAG+GGG + tig0026063:12154-12173 Msa1426690:intron 30.0%
! TTTTATTCTTATTCCAGAGG+GGG + tig0026063:12155-12174 Msa1426690:intron 30.0%
!!! TCAATTTTTTACTGCTTCAC+AGG + tig0026063:12188-12207 Msa1426690:intron 30.0%
TTTACATAAGAACTGCATGA+AGG + tig0026063:12336-12355 Msa1426690:three_prime_UTR 30.0%
ACCATAATAAAACAGGTATC+TGG + tig0026063:12513-12532 Msa1426690:three_prime_UTR 30.0%
! AGGTTTTACCCAACAATTAA+TGG - tig0026063:12541-12560 None:intergenic 30.0%
TTCAAACTTTCACAAGAACT+CGG - tig0026063:12565-12584 None:intergenic 30.0%
TCTTGTGAAAGTTTGAATGA+TGG + tig0026063:12568-12587 Msa1426690:three_prime_UTR 30.0%
TTCATCATCAACAGCTTCAT+CGG - tig0026063:5646-5665 None:intergenic 35.0%
!! GCTGTTGATGATGAATCAAA+CGG + tig0026063:5651-5670 Msa1426690:CDS 35.0%
GTTGTAGAAGTGAAATCAGA+TGG + tig0026063:5997-6016 Msa1426690:CDS 35.0%
! ATAAGCGCTCAATTAAGTTG+TGG - tig0026063:6131-6150 None:intergenic 35.0%
AATAGAAGACTACATGAGGT+AGG - tig0026063:6470-6489 None:intergenic 35.0%
TGATGAGCGTTCAATTATTC+AGG + tig0026063:6600-6619 Msa1426690:intron 35.0%
AAATTCAATGCCTTCTTTGC+TGG + tig0026063:6671-6690 Msa1426690:CDS 35.0%
ATACTACAAAGAGCAGTCTA+TGG - tig0026063:6778-6797 None:intergenic 35.0%
CAGTCTATCAACTATCATGA+AGG + tig0026063:6829-6848 Msa1426690:intron 35.0%
GCAAGGAAATCGAATCATTA+GGG - tig0026063:6999-7018 None:intergenic 35.0%
AGCAAGGAAATCGAATCATT+AGG - tig0026063:7000-7019 None:intergenic 35.0%
CGATTTCCTTGCTTTGTATT+AGG + tig0026063:7007-7026 Msa1426690:intron 35.0%
! TGATTTTTCACCAGTAAAGG+AGG + tig0026063:7217-7236 Msa1426690:intron 35.0%
! GATTTTTCACCAGTAAAGGA+GGG + tig0026063:7218-7237 Msa1426690:intron 35.0%
! TCGATTTCAAATGGCATTGA+TGG - tig0026063:7301-7320 None:intergenic 35.0%
! ATCAATGCCATTTGAAATCG+AGG + tig0026063:7300-7319 Msa1426690:CDS 35.0%
ACGCTAATTATTGAATCAGG+GGG + tig0026063:7351-7370 Msa1426690:intron 35.0%
ACTTTACCTTTCCAAACCTT+GGG - tig0026063:7935-7954 None:intergenic 35.0%
AACTTTACCTTTCCAAACCT+TGG - tig0026063:7936-7955 None:intergenic 35.0%
AAGGTTTGGAAAGGTAAAGT+TGG + tig0026063:7935-7954 Msa1426690:intron 35.0%
!!! TTTTAAGGCCACACTTTTCT+TGG - tig0026063:8086-8105 None:intergenic 35.0%
!! TAAAGAGGGTATTAACCACA+GGG - tig0026063:8205-8224 None:intergenic 35.0%
!! TTAAAGAGGGTATTAACCAC+AGG - tig0026063:8206-8225 None:intergenic 35.0%
ATTCAACCATGGTAATTAGG+GGG - tig0026063:8394-8413 None:intergenic 35.0%
ACAACCTGAAAATTCAACCA+TGG - tig0026063:8405-8424 None:intergenic 35.0%
GCTTTCAAGAATACAACGTT+TGG + tig0026063:8437-8456 Msa1426690:CDS 35.0%
TCAAAGCCATAGGAACAAAT+AGG - tig0026063:8576-8595 None:intergenic 35.0%
CAACTACATATCAAAGCCAT+AGG - tig0026063:8586-8605 None:intergenic 35.0%
GATCTTATAGAATGTCGACA+TGG - tig0026063:8694-8713 None:intergenic 35.0%
ATGAAAAAGCTGAACTCAAC+TGG + tig0026063:9005-9024 Msa1426690:intron 35.0%
!!! GTAGACTGATTTTTTGCCTT+CGG + tig0026063:9083-9102 Msa1426690:intron 35.0%
AAGTTATTCAAATCAGGGAC+AGG - tig0026063:9152-9171 None:intergenic 35.0%
ATATCCTCCGTATTTCATCT+GGG - tig0026063:9429-9448 None:intergenic 35.0%
TTTCTCATGATATGTAGAGG+AGG + tig0026063:9618-9637 Msa1426690:intron 35.0%
TCCTCAACATGACATAAGAA+AGG - tig0026063:9807-9826 None:intergenic 35.0%
TTCTTATGTCATGTTGAGGA+AGG + tig0026063:9807-9826 Msa1426690:intron 35.0%
TCTTAATGCAGATTCCTTTC+AGG - tig0026063:9942-9961 None:intergenic 35.0%
ATTAAGGAATTAACCCTTCG+TGG + tig0026063:10370-10389 Msa1426690:intron 35.0%
ATGGTGTTTGAGTATATGCA+CGG - tig0026063:10532-10551 None:intergenic 35.0%
CAAAATATGTACCTGCTACA+AGG - tig0026063:10737-10756 None:intergenic 35.0%
! CTTGTAGCAGGTACATATTT+TGG + tig0026063:10735-10754 Msa1426690:intron 35.0%
!!! GATTTTAAGAAGTGCTGTAG+GGG - tig0026063:10954-10973 None:intergenic 35.0%
AGTTCCTTTCGAGATCAAAT+TGG - tig0026063:11158-11177 None:intergenic 35.0%
!!! AATATGAACTTTTGGCTCTG+TGG + tig0026063:11187-11206 Msa1426690:intron 35.0%
AGAACCAAGTAAGTCATAGA+TGG - tig0026063:11391-11410 None:intergenic 35.0%
! ACCACATCTGGGATTATTAT+TGG + tig0026063:11486-11505 Msa1426690:CDS 35.0%
ACCAATAATAATCCCAGATG+TGG - tig0026063:11490-11509 None:intergenic 35.0%
! ACATCTGGGATTATTATTGG+TGG + tig0026063:11489-11508 Msa1426690:CDS 35.0%
!! TAGGTAAGTTTGTTACCTTC+TGG + tig0026063:11586-11605 Msa1426690:intron 35.0%
TCTATAAACAATTCAGGCTC+AGG + tig0026063:11868-11887 Msa1426690:intron 35.0%
AGGTCAAAATAGGTTACGTA+TGG - tig0026063:11909-11928 None:intergenic 35.0%
TGACTAAACCTTAGAAGTAG+AGG - tig0026063:11929-11948 None:intergenic 35.0%
AAATGAATCAGAATCCCTTC+AGG - tig0026063:11994-12013 None:intergenic 35.0%
!! GGGATTCTGATTCATTTTTC+AGG + tig0026063:11997-12016 Msa1426690:intron 35.0%
TGTGCACAAAGATCAATCTA+CGG + tig0026063:12066-12085 Msa1426690:three_prime_UTR 35.0%
CAAAGATCAATCTACGGAAA+TGG + tig0026063:12072-12091 Msa1426690:three_prime_UTR 35.0%
! TCAATCTACGGAAATGGATT+TGG + tig0026063:12078-12097 Msa1426690:three_prime_UTR 35.0%
TTTATTCTTATTCCAGAGGG+GGG + tig0026063:12156-12175 Msa1426690:intron 35.0%
!!! TCACACTGTTTTTAGTGTCA+AGG + tig0026063:12308-12327 Msa1426690:three_prime_UTR 35.0%
!! GATCAAGTGAATTTTTAGGG+TGG + tig0026063:12412-12431 Msa1426690:three_prime_UTR 35.0%
!! GCCAGATACCTGTTTTATTA+TGG - tig0026063:12517-12536 None:intergenic 35.0%
! TATCTGGCTCCATTAATTGT+TGG + tig0026063:12529-12548 Msa1426690:three_prime_UTR 35.0%
! ATCTGGCTCCATTAATTGTT+GGG + tig0026063:12530-12549 Msa1426690:three_prime_UTR 35.0%
GTTAAATTCAGAAGTGGCGA+CGG - tig0026063:5387-5406 None:intergenic 40.0%
AGATTCGTGGAATTGTGGTT+CGG - tig0026063:5496-5515 None:intergenic 40.0%
!! ATGTAACGGAGATTTTGCTC+CGG - tig0026063:5533-5552 None:intergenic 40.0%
ATTATTCAGGTCTTCGTCCA+CGG + tig0026063:6613-6632 Msa1426690:intron 40.0%
!!! CACACACACCAGTTTTGTTT+CGG + tig0026063:6944-6963 Msa1426690:intron 40.0%
!!! ACACACACCAGTTTTGTTTC+GGG + tig0026063:6945-6964 Msa1426690:intron 40.0%
GTGTATTCCCGAAACAAAAC+TGG - tig0026063:6955-6974 None:intergenic 40.0%
TTAAACCCCAAGAGCAACAA+TGG + tig0026063:7271-7290 Msa1426690:CDS 40.0%
CAACAGACCTCGATTTCAAA+TGG - tig0026063:7310-7329 None:intergenic 40.0%
! CATTTGAAATCGAGGTCTGT+TGG + tig0026063:7308-7327 Msa1426690:intron 40.0%
TTAGTGAACCAGACTATGCT+TGG - tig0026063:7409-7428 None:intergenic 40.0%
GAGATATGATAGTTAGACCC+AGG + tig0026063:7657-7676 Msa1426690:intron 40.0%
! TACTGCTACTCAGTTGTTTC+AGG - tig0026063:7683-7702 None:intergenic 40.0%
AAGTATGCATTTATGGCCCA+AGG + tig0026063:7916-7935 Msa1426690:intron 40.0%
GTTTGGAAAGGTAAAGTTGG+TGG + tig0026063:7938-7957 Msa1426690:intron 40.0%
GGTAACAATTCCATTGCAGA+AGG + tig0026063:8060-8079 Msa1426690:CDS 40.0%
! TGTGGCCTTAAAAGTAAGTC+AGG + tig0026063:8093-8112 Msa1426690:intron 40.0%
!! TGGCACCTGACTTACTTTTA+AGG - tig0026063:8101-8120 None:intergenic 40.0%
ATATGACCAGTTGGTTACCA+TGG + tig0026063:8273-8292 Msa1426690:intron 40.0%
TATGACCAGTTGGTTACCAT+GGG + tig0026063:8274-8293 Msa1426690:intron 40.0%
GATGACATTGACAAGCAAGA+TGG - tig0026063:8338-8357 None:intergenic 40.0%
CTTGCTTGTCAATGTCATCA+TGG + tig0026063:8339-8358 Msa1426690:intron 40.0%
CAAGAATACAACGTTTGGAG+CGG + tig0026063:8442-8461 Msa1426690:CDS 40.0%
ACCTGTACATGAGCAAAAAC+TGG + tig0026063:8613-8632 Msa1426690:intron 40.0%
! ACCAGTTTTTGCTCATGTAC+AGG - tig0026063:8617-8636 None:intergenic 40.0%
AGGATTCAGAGACAGGAAAA+GGG - tig0026063:9132-9151 None:intergenic 40.0%
TCAAGAAGAGCTTGAACCTA+GGG - tig0026063:9197-9216 None:intergenic 40.0%
TTCTTGAGGCCTTACCAAAT+CGG + tig0026063:9210-9229 Msa1426690:CDS 40.0%
CCTTACCAAATCGGATAACT+GGG + tig0026063:9219-9238 Msa1426690:CDS 40.0%
CTTACCAAATCGGATAACTG+GGG + tig0026063:9220-9239 Msa1426690:CDS 40.0%
ATATCCCCAGTTATCCGATT+TGG - tig0026063:9227-9246 None:intergenic 40.0%
CCTAACTCAACCTAGCAATT+TGG - tig0026063:9358-9377 None:intergenic 40.0%
! CCAAATTGCTAGGTTGAGTT+AGG + tig0026063:9355-9374 Msa1426690:intron 40.0%
CATATCCTCCGTATTTCATC+TGG - tig0026063:9430-9449 None:intergenic 40.0%
! TTTTGTGTGCTCATGTGTTG+AGG + tig0026063:9727-9746 Msa1426690:intron 40.0%
AACAGTGTTGTATGCCTTCA+CGG + tig0026063:9781-9800 Msa1426690:intron 40.0%
GCCTTTCTTATGTCATGTTG+AGG + tig0026063:9803-9822 Msa1426690:intron 40.0%
! TAGTCAAAGCACTAACATGG+TGG + tig0026063:9833-9852 Msa1426690:intron 40.0%
GAGAGCTTTCAGGATGTTAA+TGG - tig0026063:9902-9921 None:intergenic 40.0%
ACATGGATAAGAGAGCTTTC+AGG - tig0026063:9912-9931 None:intergenic 40.0%
TCCATGTTGCAATACCTGAA+AGG + tig0026063:9925-9944 Msa1426690:intron 40.0%
! TCCTTTCAGGTATTGCAACA+TGG - tig0026063:9929-9948 None:intergenic 40.0%
TGCAGATGTGAATCTTGTCA+CGG + tig0026063:10097-10116 Msa1426690:intron 40.0%
AAAGGCTTCTTGATTCTGCA+AGG + tig0026063:10128-10147 Msa1426690:CDS 40.0%
AAGGCTTCTTGATTCTGCAA+GGG + tig0026063:10129-10148 Msa1426690:CDS 40.0%
TCTTGATTCTGCAAGGGAAA+TGG + tig0026063:10135-10154 Msa1426690:CDS 40.0%
GATTAGCAAAACGCAGCTTT+GGG - tig0026063:10303-10322 None:intergenic 40.0%
TGATTAGCAAAACGCAGCTT+TGG - tig0026063:10304-10323 None:intergenic 40.0%
! AAGCTGCGTTTTGCTAATCA+TGG + tig0026063:10304-10323 Msa1426690:intron 40.0%
!!! TGTTTTTGGACTGTCATCCT+TGG + tig0026063:10330-10349 Msa1426690:intron 40.0%
TTGACTTCACAATGGAACCA+AGG - tig0026063:10350-10369 None:intergenic 40.0%
TGACAATATGTGACCACGAA+GGG - tig0026063:10386-10405 None:intergenic 40.0%
ATGACAATATGTGACCACGA+AGG - tig0026063:10387-10406 None:intergenic 40.0%
CACGGAGTTAGATTCTTAGA+TGG - tig0026063:10514-10533 None:intergenic 40.0%
TTACTGATGACAGAGAGCTA+TGG - tig0026063:10605-10624 None:intergenic 40.0%
!! TAGCAGGTACATATTTTGGG+TGG + tig0026063:10739-10758 Msa1426690:intron 40.0%
GTGCAGTGCATGTTATTATC+AGG - tig0026063:11012-11031 None:intergenic 40.0%
CATGTACCTAGGTGGTTAAA+TGG - tig0026063:11034-11053 None:intergenic 40.0%
CAAATGAACATGTACCTAGG+TGG - tig0026063:11042-11061 None:intergenic 40.0%
GTTGCCAATTTGATCTCGAA+AGG + tig0026063:11151-11170 Msa1426690:intron 40.0%
TTGATCTCGAAAGGAACTTG+TGG + tig0026063:11160-11179 Msa1426690:intron 40.0%
GTTAAATGCACAAGACTGTC+TGG + tig0026063:11223-11242 Msa1426690:intron 40.0%
!!! CATTTTGGTTGACCACATCT+GGG + tig0026063:11475-11494 Msa1426690:CDS 40.0%
TGTATAACTACCTCAGAGCA+AGG + tig0026063:11532-11551 Msa1426690:CDS 40.0%
TTAAGAAGAGGAGGATTGCT+GGG - tig0026063:11620-11639 None:intergenic 40.0%
ATTAAGAAGAGGAGGATTGC+TGG - tig0026063:11621-11640 None:intergenic 40.0%
! AATCAGAATCCCTTCAGGTT+CGG - tig0026063:11989-12008 None:intergenic 40.0%
TGCACAATCACTGCATTTGT+GGG - tig0026063:12052-12071 None:intergenic 40.0%
ACTGCTTCACAGGTTCATAA+TGG + tig0026063:12198-12217 Msa1426690:intron 40.0%
AACTTTCACAAGAACTCGGT+AGG - tig0026063:12561-12580 None:intergenic 40.0%
GATGGAGAAAGAATACAGAC+TGG + tig0026063:12586-12605 Msa1426690:three_prime_UTR 40.0%
!! AACGGAACAAGGTTGGTAGT+TGG - tig0026063:5335-5354 None:intergenic 45.0%
AAAGGTTGGAAGCGAAAGTG+AGG - tig0026063:5435-5454 None:intergenic 45.0%
GTGAGAGATTCGTGGAATTG+TGG - tig0026063:5501-5520 None:intergenic 45.0%
GAAGAAGAGTGAGAGATTCG+TGG - tig0026063:5509-5528 None:intergenic 45.0%
AATCTCTCACTCTTCTTCGC+CGG + tig0026063:5511-5530 Msa1426690:CDS 45.0%
AATCTCCGTTACATCATCGC+CGG + tig0026063:5539-5558 Msa1426690:CDS 45.0%
GTGGATCTACTGCATTTCAC+CGG - tig0026063:5573-5592 None:intergenic 45.0%
GGTGAAATGCAGTAGATCCA+CGG + tig0026063:5572-5591 Msa1426690:CDS 45.0%
CTTCTTCAATAGAGTCTCCG+AGG + tig0026063:5691-5710 Msa1426690:CDS 45.0%
TAGAGAATCTCCAGAAGAGG+TGG - tig0026063:5724-5743 None:intergenic 45.0%
CGATAGAGAATCTCCAGAAG+AGG - tig0026063:5727-5746 None:intergenic 45.0%
TCTGGAGATTCTCTATCGCT+CGG + tig0026063:5729-5748 Msa1426690:CDS 45.0%
CTACATGAGGTAGGTGCTAA+TGG - tig0026063:6461-6480 None:intergenic 45.0%
TTATTCAGGTCTTCGTCCAC+GGG + tig0026063:6614-6633 Msa1426690:intron 45.0%
AAAACTGGTGTGTGTGCATG+TGG - tig0026063:6940-6959 None:intergenic 45.0%
CACGGACCTAATACAAAGCA+AGG - tig0026063:7016-7035 None:intergenic 45.0%
AAAAGCTTGCCCTCCTTTAC+TGG - tig0026063:7230-7249 None:intergenic 45.0%
!! TTCTAGAGTCATTGCTGCCT+CGG + tig0026063:7248-7267 Msa1426690:CDS 45.0%
TCCAACTTCCAAGCATAGTC+TGG + tig0026063:7398-7417 Msa1426690:intron 45.0%
ACCAGACTATGCTTGGAAGT+TGG - tig0026063:7402-7421 None:intergenic 45.0%
! TACTCAGTTGTTTCAGGCCT+GGG - tig0026063:7677-7696 None:intergenic 45.0%
TGCATTTATGGCCCAAGGTT+TGG + tig0026063:7921-7940 Msa1426690:intron 45.0%
TTATGGCCCAAGGTTTGGAA+AGG + tig0026063:7926-7945 Msa1426690:intron 45.0%
AGTGTAAAAGACGACGCAGA+AGG + tig0026063:8027-8046 Msa1426690:CDS 45.0%
GACGCAGAAGGATCTAAAGA+TGG + tig0026063:8039-8058 Msa1426690:CDS 45.0%
!! CTTTTCTTGGCCTTCTGCAA+TGG - tig0026063:8073-8092 None:intergenic 45.0%
TTACACCCATGGTAACCAAC+TGG - tig0026063:8282-8301 None:intergenic 45.0%
TGAGAACACAGTTACACCCA+TGG - tig0026063:8293-8312 None:intergenic 45.0%
ATGGTAATTAGGGGGAAGAG+TGG - tig0026063:8386-8405 None:intergenic 45.0%
ACTCTTCCCCCTAATTACCA+TGG + tig0026063:8385-8404 Msa1426690:intron 45.0%
CTTAGAACCTCGTGTGAGTA+TGG + tig0026063:8476-8495 Msa1426690:CDS 45.0%
TGTGTTTCCATACTCACACG+AGG - tig0026063:8486-8505 None:intergenic 45.0%
CAGGATTCAGAGACAGGAAA+AGG - tig0026063:9133-9152 None:intergenic 45.0%
CTCAAGAAGAGCTTGAACCT+AGG - tig0026063:9198-9217 None:intergenic 45.0%
CTAGGTTCAAGCTCTTCTTG+AGG + tig0026063:9196-9215 Msa1426690:intron 45.0%
GCCTTACCAAATCGGATAAC+TGG + tig0026063:9218-9237 Msa1426690:CDS 45.0%
!! CCCAGTTATCCGATTTGGTA+AGG - tig0026063:9222-9241 None:intergenic 45.0%
TCGGATAACTGGGGATATAC+TGG + tig0026063:9229-9248 Msa1426690:CDS 45.0%
TCACTTCCTGCCAAATTGCT+AGG + tig0026063:9345-9364 Msa1426690:intron 45.0%
ACTCAACCTAGCAATTTGGC+AGG - tig0026063:9354-9373 None:intergenic 45.0%
! CTAGGTTGAGTTAGGCTCAA+GGG + tig0026063:9363-9382 Msa1426690:intron 45.0%
TGGAGGACCCAGATGAAATA+CGG + tig0026063:9419-9438 Msa1426690:CDS 45.0%
GCACTGAGCATTCCACATTA+TGG - tig0026063:9489-9508 None:intergenic 45.0%
TCAGCAACCTGCTTGTCTAA+AGG - tig0026063:9511-9530 None:intergenic 45.0%
TTTAGACAAGCAGGTTGCTG+AGG + tig0026063:9510-9529 Msa1426690:CDS 45.0%
TTAGACAAGCAGGTTGCTGA+GGG + tig0026063:9511-9530 Msa1426690:CDS 45.0%
GAGGGTAAGCTGTGAAATAC+TGG + tig0026063:9529-9548 Msa1426690:intron 45.0%
CTCATGATATGTAGAGGAGG+AGG + tig0026063:9621-9640 Msa1426690:intron 45.0%
ATGATATGTAGAGGAGGAGG+AGG + tig0026063:9624-9643 Msa1426690:intron 45.0%
GGAGGAAATTGAGATGCTTC+TGG + tig0026063:9642-9661 Msa1426690:CDS 45.0%
TGACATAAGAAAGGCCGTGA+AGG - tig0026063:9798-9817 None:intergenic 45.0%
TGGTTCCATTCAACAGCTCA+CGG + tig0026063:10646-10665 Msa1426690:intron 45.0%
ACTGCACCATTTAACCACCT+AGG + tig0026063:11025-11044 Msa1426690:intron 45.0%
GAACCTGAAGTCCTATCTTG+AGG + tig0026063:11332-11351 Msa1426690:CDS 45.0%
GTTCCTCAAGATAGGACTTC+AGG - tig0026063:11338-11357 None:intergenic 45.0%
!!! GCATTTTGGTTGACCACATC+TGG + tig0026063:11474-11493 Msa1426690:CDS 45.0%
TAAGAAGAGGAGGATTGCTG+GGG - tig0026063:11619-11638 None:intergenic 45.0%
ATTAAGTGCTCCGAACCTGA+AGG + tig0026063:11976-11995 Msa1426690:intron 45.0%
TTAAGTGCTCCGAACCTGAA+GGG + tig0026063:11977-11996 Msa1426690:intron 45.0%
GTGCACAATCACTGCATTTG+TGG - tig0026063:12053-12072 None:intergenic 45.0%
!!! TTTTTATTATTATTATTTGA+TGG - tig0026063:5259-5278 None:intergenic 5.0%
TACCAACCTTGTTCCGTTCC+CGG + tig0026063:5337-5356 Msa1426690:five_prime_UTR 50.0%
!! TTACGGTGGTTTTGCATGCC+GGG - tig0026063:5358-5377 None:intergenic 50.0%
!! GTTACGGTGGTTTTGCATGC+CGG - tig0026063:5359-5378 None:intergenic 50.0%
AAATTCAGAAGTGGCGACGG+TGG - tig0026063:5384-5403 None:intergenic 50.0%
GTCGGAGAAGAAGAGGTAGT+TGG - tig0026063:5469-5488 None:intergenic 50.0%
!! GAATTGTGGTTCGGTGAGGT+CGG - tig0026063:5487-5506 None:intergenic 50.0%
TTCATCGGAATCAGACGCGA+CGG - tig0026063:5631-5650 None:intergenic 50.0%
GAAGAGGTGGTTGCAATCCT+CGG - tig0026063:5711-5730 None:intergenic 50.0%
AGGATTGCAACCACCTCTTC+TGG + tig0026063:5711-5730 Msa1426690:CDS 50.0%
TTGCTCTTGGGGTTTAACCG+AGG - tig0026063:7268-7287 None:intergenic 50.0%
AACCCCAAGAGCAACAATGG+AGG + tig0026063:7274-7293 Msa1426690:CDS 50.0%
ACCCCAAGAGCAACAATGGA+GGG + tig0026063:7275-7294 Msa1426690:CDS 50.0%
! CTACTCAGTTGTTTCAGGCC+TGG - tig0026063:7678-7697 None:intergenic 50.0%
GCAGAAGGCCAAGAAAAGTG+TGG + tig0026063:8075-8094 Msa1426690:CDS 50.0%
TGTCGACATGGAGAAGTAGC+AGG - tig0026063:8682-8701 None:intergenic 50.0%
! GCTAGGTTGAGTTAGGCTCA+AGG + tig0026063:9362-9381 Msa1426690:intron 50.0%
! GCAGATGCTGCTTGATCTTC+TGG + tig0026063:9399-9418 Msa1426690:CDS 50.0%
! GATGCTGCTTGATCTTCTGG+AGG + tig0026063:9402-9421 Msa1426690:CDS 50.0%
AGGACCCAGATGAAATACGG+AGG + tig0026063:9422-9441 Msa1426690:CDS 50.0%
CTCAGTGCCTTTAGACAAGC+AGG + tig0026063:9501-9520 Msa1426690:CDS 50.0%
CTTGTCACGGTCAAGCTGAA+AGG + tig0026063:10110-10129 Msa1426690:CDS 50.0%
TTCCATTCAACAGCTCACGG+AGG + tig0026063:10649-10668 Msa1426690:intron 50.0%
ACGGAGGCTTGAAGTTAGCA+GGG + tig0026063:10665-10684 Msa1426690:CDS 50.0%
CCACACAGAATGTTCCAACC+TGG - tig0026063:10704-10723 None:intergenic 50.0%
! CCAGGTTGGAACATTCTGTG+TGG + tig0026063:10701-10720 Msa1426690:CDS 50.0%
GGAACATTCTGTGTGGCAGT+TGG + tig0026063:10708-10727 Msa1426690:CDS 50.0%
GTCCTATCTTGAGGAACGTG+TGG + tig0026063:11341-11360 Msa1426690:CDS 50.0%
CACCACACGTTCCTCAAGAT+AGG - tig0026063:11346-11365 None:intergenic 50.0%
ACGTATGGCAGAGCTTATCG+AGG - tig0026063:11894-11913 None:intergenic 50.0%
CCTAGCGAAGAGTCTCTTGA+TGG - tig0026063:12242-12261 None:intergenic 50.0%
CCATCAAGAGACTCTTCGCT+AGG + tig0026063:12239-12258 Msa1426690:three_prime_UTR 50.0%
! TCGCTAGGTTGTTGCTTGTG+TGG + tig0026063:12254-12273 Msa1426690:three_prime_UTR 50.0%
! CGCTAGGTTGTTGCTTGTGT+GGG + tig0026063:12255-12274 Msa1426690:three_prime_UTR 50.0%
!! GTGGTTTTGCATGCCGGGAA+CGG - tig0026063:5353-5372 None:intergenic 55.0%
! TAGTTGGTGCGCGTGAGGAA+AGG - tig0026063:5453-5472 None:intergenic 55.0%
!! CGTGGAATTGTGGTTCGGTG+AGG - tig0026063:5491-5510 None:intergenic 55.0%
GATCCACGGAAGAAAAGCCG+TGG + tig0026063:5586-5605 Msa1426690:CDS 55.0%
! GTTCCACGGCTTTTCTTCCG+TGG - tig0026063:5592-5611 None:intergenic 55.0%
TCGGTTTCAGCGTCGTTCCA+CGG - tig0026063:5606-5625 None:intergenic 55.0%
GGAATCAGACGCGACGGTTT+CGG - tig0026063:5625-5644 None:intergenic 55.0%
TCCACGGGACGTTAGAAGTG+TGG + tig0026063:6629-6648 Msa1426690:CDS 55.0%
TCCACACTTCTAACGTCCCG+TGG - tig0026063:6633-6652 None:intergenic 55.0%
GCCCTCCATTGTTGCTCTTG+GGG - tig0026063:7279-7298 None:intergenic 55.0%
GGCCCTCCATTGTTGCTCTT+GGG - tig0026063:7280-7299 None:intergenic 55.0%
TGGCCCTCCATTGTTGCTCT+TGG - tig0026063:7281-7300 None:intergenic 55.0%
GGTGTAAGTCTCGTTCCCTG+TGG + tig0026063:8187-8206 Msa1426690:intron 55.0%
! ACGTTTGGAGCGGAGACTGA+TGG + tig0026063:8452-8471 Msa1426690:CDS 55.0%
CAGGGACAGGATTCAGAGAC+AGG - tig0026063:9139-9158 None:intergenic 55.0%
AGAGCTTGAACCTAGGGCCA+GGG - tig0026063:9191-9210 None:intergenic 55.0%
AAGAGCTTGAACCTAGGGCC+AGG - tig0026063:9192-9211 None:intergenic 55.0%
GTTGAGTTAGGCTCAAGGGC+AGG + tig0026063:9367-9386 Msa1426690:CDS 55.0%
AGCCTCCGTGAGCTGTTGAA+TGG - tig0026063:10654-10673 None:intergenic 55.0%
CACGGAGGCTTGAAGTTAGC+AGG + tig0026063:10664-10683 Msa1426690:CDS 55.0%
GAGGCTTGAAGTTAGCAGGG+TGG + tig0026063:10668-10687 Msa1426690:CDS 55.0%
GTGGAACTGCTTCTCCAGGT+TGG + tig0026063:10687-10706 Msa1426690:CDS 55.0%
AGGAGGATTGCTGGGGAAAC+AGG - tig0026063:11612-11631 None:intergenic 55.0%
TGAATCTGTCTACCCCCCTC+TGG - tig0026063:12171-12190 None:intergenic 55.0%
ATCCATGCACTGCGTGACTC+TGG - tig0026063:12450-12469 None:intergenic 55.0%
GAGTCACGCAGTGCATGGAT+CGG + tig0026063:12450-12469 Msa1426690:three_prime_UTR 55.0%
TGCCGGGAACGGAACAAGGT+TGG - tig0026063:5342-5361 None:intergenic 60.0%
TGCATGCCGGGAACGGAACA+AGG - tig0026063:5346-5365 None:intergenic 60.0%
AGTGGCGACGGTGGAGGTTA+CGG - tig0026063:5375-5394 None:intergenic 60.0%
TTCAGAAGTGGCGACGGTGG+AGG - tig0026063:5381-5400 None:intergenic 60.0%
TGGTGCGCGTGAGGAAAGGT+TGG - tig0026063:5449-5468 None:intergenic 60.0%
! AGAGGTAGTTGGTGCGCGTG+AGG - tig0026063:5458-5477 None:intergenic 60.0%
CGGTGAGGTCGGAGAAGAAG+AGG - tig0026063:5476-5495 None:intergenic 60.0%
!! GAGCGCCGGCGATGATGTAA+CGG - tig0026063:5547-5566 None:intergenic 60.0%
!! CATTTCACCGGCTTGAGCGC+CGG - tig0026063:5561-5580 None:intergenic 60.0%
! TTTTCTCTCCCCCTACCCCC+TGG + tig0026063:9171-9190 Msa1426690:intron 60.0%
AGCTTGAACCTAGGGCCAGG+GGG - tig0026063:9189-9208 None:intergenic 60.0%
GAGCTTGAACCTAGGGCCAG+GGG - tig0026063:9190-9209 None:intergenic 60.0%
CAGGGTGGAACTGCTTCTCC+AGG + tig0026063:10683-10702 Msa1426690:CDS 60.0%
! GCAGTTGGTGCCCTTGTAGC+AGG + tig0026063:10723-10742 Msa1426690:CDS 60.0%
TGCTGGGGAAACAGGCCAGA+AGG - tig0026063:11604-11623 None:intergenic 60.0%
GTCCAGAGTCACGCAGTGCA+TGG + tig0026063:12445-12464 Msa1426690:three_prime_UTR 60.0%
ATCATCGCCGGCGCTCAAGC+CGG + tig0026063:5551-5570 Msa1426690:CDS 65.0%
AACCTAGGGCCAGGGGGTAG+GGG - tig0026063:9183-9202 None:intergenic 65.0%
GAACCTAGGGCCAGGGGGTA+GGG - tig0026063:9184-9203 None:intergenic 65.0%
TGAACCTAGGGCCAGGGGGT+AGG - tig0026063:9185-9204 None:intergenic 65.0%
GCTCAAGGGCAGGAGCTCTC+AGG + tig0026063:9377-9396 Msa1426690:CDS 65.0%
GGCGACGGTGGAGGTTACGG+TGG - tig0026063:5372-5391 None:intergenic 70.0%
ACCTAGGGCCAGGGGGTAGG+GGG - tig0026063:9182-9201 None:intergenic 70.0%
TCCCCCTACCCCCTGGCCCT+AGG + tig0026063:9178-9197 Msa1426690:intron 75.0%
Chromosome Type Strat End Strand Name
tig0026063 gene 5213 12613 5213 ID=Msa1426690;Name=Msa1426690
tig0026063 mRNA 5213 12613 5213 ID=Msa1426690-mRNA-1;Parent=Msa1426690;Name=Msa1426690-mRNA-1;_AED=0.13;_eAED=0.13;_QI=198|0.86|0.93|0.93|0.86|0.87|16|510|483
tig0026063 exon 5213 5773 5213 ID=Msa1426690-mRNA-1:exon:5046;Parent=Msa1426690-mRNA-1
tig0026063 exon 5997 6069 5997 ID=Msa1426690-mRNA-1:exon:5047;Parent=Msa1426690-mRNA-1
tig0026063 exon 6622 6692 6622 ID=Msa1426690-mRNA-1:exon:5048;Parent=Msa1426690-mRNA-1
tig0026063 exon 7029 7114 7029 ID=Msa1426690-mRNA-1:exon:5049;Parent=Msa1426690-mRNA-1
tig0026063 exon 7231 7321 7231 ID=Msa1426690-mRNA-1:exon:5050;Parent=Msa1426690-mRNA-1
tig0026063 exon 8021 8105 8021 ID=Msa1426690-mRNA-1:exon:5051;Parent=Msa1426690-mRNA-1
tig0026063 exon 8420 8505 8420 ID=Msa1426690-mRNA-1:exon:5052;Parent=Msa1426690-mRNA-1
tig0026063 exon 9200 9280 9200 ID=Msa1426690-mRNA-1:exon:5053;Parent=Msa1426690-mRNA-1
tig0026063 exon 9367 9532 9367 ID=Msa1426690-mRNA-1:exon:5054;Parent=Msa1426690-mRNA-1
tig0026063 exon 9635 9680 9635 ID=Msa1426690-mRNA-1:exon:5055;Parent=Msa1426690-mRNA-1
tig0026063 exon 10102 10182 10102 ID=Msa1426690-mRNA-1:exon:5056;Parent=Msa1426690-mRNA-1
tig0026063 exon 10662 10744 10662 ID=Msa1426690-mRNA-1:exon:5057;Parent=Msa1426690-mRNA-1
tig0026063 exon 11319 11362 11319 ID=Msa1426690-mRNA-1:exon:5058;Parent=Msa1426690-mRNA-1
tig0026063 exon 11471 11588 11471 ID=Msa1426690-mRNA-1:exon:5059;Parent=Msa1426690-mRNA-1
tig0026063 exon 12019 12102 12019 ID=Msa1426690-mRNA-1:exon:5060;Parent=Msa1426690-mRNA-1
tig0026063 exon 12210 12613 12210 ID=Msa1426690-mRNA-1:exon:5061;Parent=Msa1426690-mRNA-1
tig0026063 five_prime_UTR 5213 5410 5213 ID=Msa1426690-mRNA-1:five_prime_utr;Parent=Msa1426690-mRNA-1
tig0026063 CDS 5411 5773 5411 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 5997 6069 5997 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 6622 6692 6622 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 7029 7114 7029 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 7231 7321 7231 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 8021 8105 8021 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 8420 8505 8420 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 9200 9280 9200 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 9367 9532 9367 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 9635 9680 9635 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 10102 10182 10102 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 10662 10744 10662 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 11319 11362 11319 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 CDS 11471 11566 11471 ID=Msa1426690-mRNA-1:cds;Parent=Msa1426690-mRNA-1
tig0026063 three_prime_UTR 11567 11588 11567 ID=Msa1426690-mRNA-1:three_prime_utr;Parent=Msa1426690-mRNA-1
tig0026063 three_prime_UTR 12019 12102 12019 ID=Msa1426690-mRNA-1:three_prime_utr;Parent=Msa1426690-mRNA-1
tig0026063 three_prime_UTR 12210 12613 12210 ID=Msa1426690-mRNA-1:three_prime_utr;Parent=Msa1426690-mRNA-1
Gene Sequence

>Msa1426690

ATGGCTTTAACTCTAACTTCTCCTCACTTTCGCTTCCAACCTTTCCTCACGCGCACCAACTACCTCTTCTTCTCCGACCTCACCGAACCACAATTCCACGAATCTCTCACTCTTCTTCGCCGGAGCAAAATCTCCGTTACATCATCGCCGGCGCTCAAGCCGGTGAAATGCAGTAGATCCACGGAAGAAAAGCCGTGGAACGACGCTGAAACCGAAACCGTCGCGTCTGATTCCGATGAAGCTGTTGATGATGAATCAAACGGTCAAGCTCCGAGCAAAACTTCTTCAATAGAGTCTCCGAGGATTGCAACCACCTCTTCTGGAGATTCTCTATCGCTCGGAATTCGTGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGATGGGACAGTATCGACTAGAAAAATCAATAGAAGACAATTATTGAAGTCTAGTGGTCTTCGTCCACGGGACGTTAGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACTTGGGTTCACTACGAGCAATCGCAATGCAAGATTGTGTACTTATATTTGATTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTAAACCCCAAGAGCAACAATGGAGGGCCATCAATGCCATTTGAAATCGAGTGCTTAAGTGTAAAAGACGACGCAGAAGGATCTAAAGATGGTAACAATTCCATTGCAGAAGGCCAAGAAAAGTGTGGCCTTAAAAGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTGAGTATGGAAACACAGTTCAAGCTCTTCTTGAGGCCTTACCAAATCGGATAACTGGGGATATACTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCAAGGGCAGGAGCTCTCAGGCAGATGCTGCTTGATCTTCTGGAGGACCCAGATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACAATAAATAAAGGAAACCATAATGTGGAATGCTCAGTGCCTTTAGACAAGCAGGTTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCACGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTAAGCTCACGGAGGCTTGAAGTTAGCAGGGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGCATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACGTGTGTTTGCATTTTGGTTGACCACATCTGGGATTATTATTGGTGGCATTGTTGTTTTTTTTATTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA

Protein sequence

>Msa1426690

MALTLTSPHFRFQPFLTRTNYLFFSDLTEPQFHESLTLLRRSKISVTSSPALKPVKCSRSTEEKPWNDAETETVASDSDEAVDDESNGQAPSKTSSIESPRIATTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKSNNGGPSMPFEIECLSVKDDAEGSKDGNNSIAEGQEKCGLKSCRSSIAFKNTTFGAETDGLRTSCEYGNTVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPDEIRRICIMGRNCTINKGNHNVECSVPLDKQVAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEERVFAFWLTTSGIIIGGIVVFFIMYNYLRARKIF*