Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133250 | sp|Q9FLW2|FRO5_ARATH | 55.285 | 246 | 108 | 2 | 258 | 502 | 340 | 584 | 2.09e-86 | 284 |
| Msa0133250 | sp|Q9FLW2|FRO5_ARATH | 41.667 | 252 | 109 | 7 | 14 | 256 | 8 | 230 | 5.72e-48 | 180 |
| Msa0133250 | sp|Q9FLW2|FRO5_ARATH | 44.444 | 117 | 54 | 4 | 416 | 531 | 601 | 707 | 3.41e-18 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133250 | A0A2C9VR10 | 53.673 | 490 | 163 | 5 | 14 | 485 | 2 | 445 | 7.42e-166 | 492 |
| Msa0133250 | A0A2C9VR10 | 78.261 | 46 | 10 | 0 | 486 | 531 | 535 | 580 | 4.28e-15 | 89.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0133250 | 0.809768 | 1.607099e-50 | -8.615850e-47 |
| Msa0005500 | Msa0133250 | 0.808795 | 2.598153e-50 | -8.615850e-47 |
| Msa0011920 | Msa0133250 | 0.807882 | 4.067928e-50 | -8.615850e-47 |
| Msa0021240 | Msa0133250 | 0.801088 | 1.061903e-48 | -8.615850e-47 |
| Msa0024490 | Msa0133250 | 0.804979 | 1.665841e-49 | -8.615850e-47 |
| Msa0025090 | Msa0133250 | 0.807580 | 4.715455e-50 | -8.615850e-47 |
| Msa0030320 | Msa0133250 | 0.822264 | 2.599133e-53 | -8.615850e-47 |
| Msa0033190 | Msa0133250 | 0.803176 | 3.949665e-49 | -8.615850e-47 |
| Msa0038910 | Msa0133250 | 0.944869 | 8.808481e-104 | -8.615850e-47 |
| Msa0046020 | Msa0133250 | 0.804341 | 2.262971e-49 | -8.615850e-47 |
| Msa0049670 | Msa0133250 | 0.815017 | 1.146717e-51 | -8.615850e-47 |
| Msa0067750 | Msa0133250 | 0.817426 | 3.318763e-52 | -8.615850e-47 |
| Msa0077920 | Msa0133250 | 0.812876 | 3.400418e-51 | -8.615850e-47 |
| Msa0079320 | Msa0133250 | 0.832789 | 7.735232e-56 | -8.615850e-47 |
| Msa0079840 | Msa0133250 | 0.802298 | 5.996284e-49 | -8.615850e-47 |
| Msa0081700 | Msa0133250 | 0.819487 | 1.132107e-52 | -8.615850e-47 |
| Msa0082340 | Msa0133250 | 0.808240 | 3.413704e-50 | -8.615850e-47 |
| Msa0086380 | Msa0133250 | 0.988359 | 1.039773e-173 | -8.615850e-47 |
| Msa0091300 | Msa0133250 | 0.851745 | 7.267153e-61 | -8.615850e-47 |
| Msa0097470 | Msa0133250 | 0.816567 | 5.173381e-52 | -8.615850e-47 |
| Msa0105500 | Msa0133250 | 0.816960 | 4.223186e-52 | -8.615850e-47 |
| Msa0110350 | Msa0133250 | 0.834570 | 2.776964e-56 | -8.615850e-47 |
| Msa0117400 | Msa0133250 | 0.836009 | 1.202839e-56 | -8.615850e-47 |
| Msa0125810 | Msa0133250 | 0.804728 | 1.879491e-49 | -8.615850e-47 |
| Msa0127220 | Msa0133250 | 0.806928 | 6.480654e-50 | -8.615850e-47 |
| Msa0133190 | Msa0133250 | 0.986818 | 4.466661e-168 | -8.615850e-47 |
| Msa0133250 | Msa0172110 | 0.852515 | 4.389686e-61 | -8.615850e-47 |
| Msa0133250 | Msa0172310 | 0.807701 | 4.444963e-50 | -8.615850e-47 |
| Msa0133250 | Msa0173700 | 0.805545 | 1.267574e-49 | -8.615850e-47 |
| Msa0133250 | Msa0174060 | 0.813546 | 2.423568e-51 | -8.615850e-47 |
| Msa0133250 | Msa0177180 | 0.809992 | 1.438590e-50 | -8.615850e-47 |
| Msa0133250 | Msa0181690 | 0.906465 | 1.440858e-80 | -8.615850e-47 |
| Msa0133250 | Msa0194370 | 0.807378 | 5.203666e-50 | -8.615850e-47 |
| Msa0133250 | Msa0195850 | 0.810193 | 1.302133e-50 | -8.615850e-47 |
| Msa0133250 | Msa0198140 | 0.810091 | 1.369394e-50 | -8.615850e-47 |
| Msa0133250 | Msa0207150 | 0.809573 | 1.769800e-50 | -8.615850e-47 |
| Msa0133250 | Msa0216900 | 0.800313 | 1.528400e-48 | -8.615850e-47 |
| Msa0133250 | Msa0228360 | 0.810543 | 1.094193e-50 | -8.615850e-47 |
| Msa0133250 | Msa0232170 | 0.821019 | 5.043845e-53 | -8.615850e-47 |
| Msa0133250 | Msa0238530 | 0.809245 | 2.081623e-50 | -8.615850e-47 |
| Msa0133250 | Msa0240630 | 0.807251 | 5.537511e-50 | -8.615850e-47 |
| Msa0133250 | Msa0241560 | 0.840168 | 1.022841e-57 | -8.615850e-47 |
| Msa0133250 | Msa0249670 | 0.802650 | 5.071834e-49 | -8.615850e-47 |
| Msa0133250 | Msa0258280 | 0.845264 | 4.526253e-59 | -8.615850e-47 |
| Msa0133250 | Msa0275260 | 0.817795 | 2.739360e-52 | -8.615850e-47 |
| Msa0133250 | Msa0278340 | 0.803334 | 3.662788e-49 | -8.615850e-47 |
| Msa0133250 | Msa0279460 | 0.832984 | 6.918369e-56 | -8.615850e-47 |
| Msa0133250 | Msa0297320 | 0.831289 | 1.816191e-55 | -8.615850e-47 |
| Msa0133250 | Msa0313910 | 0.831014 | 2.122126e-55 | -8.615850e-47 |
| Msa0133250 | Msa0315720 | 0.806921 | 6.503735e-50 | -8.615850e-47 |
| Msa0133250 | Msa0315760 | 0.829544 | 4.850845e-55 | -8.615850e-47 |
| Msa0133250 | Msa0318320 | 0.804104 | 2.535727e-49 | -8.615850e-47 |
| Msa0133250 | Msa0319060 | 0.847011 | 1.514576e-59 | -8.615850e-47 |
| Msa0133250 | Msa0323790 | 0.807577 | 4.723473e-50 | -8.615850e-47 |
| Msa0133250 | Msa0355630 | 0.819339 | 1.223521e-52 | -8.615850e-47 |
| Msa0133250 | Msa0363180 | 0.819171 | 1.336303e-52 | -8.615850e-47 |
| Msa0133250 | Msa0379890 | 0.802949 | 4.399838e-49 | -8.615850e-47 |
| Msa0133250 | Msa0384330 | 0.839881 | 1.215467e-57 | -8.615850e-47 |
| Msa0133250 | Msa0388790 | 0.834270 | 3.302362e-56 | -8.615850e-47 |
| Msa0133250 | Msa0390590 | 0.804390 | 2.210936e-49 | -8.615850e-47 |
| Msa0133250 | Msa0404900 | 0.816752 | 4.703458e-52 | -8.615850e-47 |
| Msa0133250 | Msa0412480 | 0.806053 | 9.916053e-50 | -8.615850e-47 |
| Msa0133250 | Msa0415760 | 0.802758 | 4.819772e-49 | -8.615850e-47 |
| Msa0133250 | Msa0437820 | 0.802907 | 4.489095e-49 | -8.615850e-47 |
| Msa0133250 | Msa0450430 | 0.822447 | 2.357717e-53 | -8.615850e-47 |
| Msa0133250 | Msa0459970 | 0.816400 | 5.640014e-52 | -8.615850e-47 |
| Msa0133250 | Msa0460510 | 0.801941 | 7.099268e-49 | -8.615850e-47 |
| Msa0133250 | Msa0474220 | 0.806034 | 1.000722e-49 | -8.615850e-47 |
| Msa0133250 | Msa0475700 | 0.807972 | 3.892861e-50 | -8.615850e-47 |
| Msa0133250 | Msa0477070 | 0.805575 | 1.249199e-49 | -8.615850e-47 |
| Msa0133250 | Msa0478660 | 0.845786 | 3.267325e-59 | -8.615850e-47 |
| Msa0133250 | Msa0501920 | 0.803161 | 3.978183e-49 | -8.615850e-47 |
| Msa0133250 | Msa0507960 | 0.801995 | 6.921352e-49 | -8.615850e-47 |
| Msa0133250 | Msa0521190 | 0.810102 | 1.361645e-50 | -8.615850e-47 |
| Msa0133250 | Msa0522730 | 0.837392 | 5.341287e-57 | -8.615850e-47 |
| Msa0133250 | Msa0554430 | 0.806149 | 9.461733e-50 | -8.615850e-47 |
| Msa0133250 | Msa0559440 | 0.811006 | 8.686168e-51 | -8.615850e-47 |
| Msa0133250 | Msa0560010 | 0.813452 | 2.541741e-51 | -8.615850e-47 |
| Msa0133250 | Msa0560650 | 0.831080 | 2.044266e-55 | -8.615850e-47 |
| Msa0133250 | Msa0562680 | 0.811586 | 6.499661e-51 | -8.615850e-47 |
| Msa0133250 | Msa0563230 | 0.813256 | 2.806169e-51 | -8.615850e-47 |
| Msa0133250 | Msa0564000 | 0.803752 | 3.000906e-49 | -8.615850e-47 |
| Msa0133250 | Msa0567420 | 0.817201 | 3.727893e-52 | -8.615850e-47 |
| Msa0133250 | Msa0567490 | 0.810466 | 1.136668e-50 | -8.615850e-47 |
| Msa0133250 | Msa0567530 | 0.808044 | 3.757072e-50 | -8.615850e-47 |
| Msa0133250 | Msa0569980 | 0.810367 | 1.194071e-50 | -8.615850e-47 |
| Msa0133250 | Msa0573940 | 0.817952 | 2.524876e-52 | -8.615850e-47 |
| Msa0133250 | Msa0575970 | 0.823491 | 1.346138e-53 | -8.615850e-47 |
| Msa0133250 | Msa0576110 | 0.803623 | 3.191894e-49 | -8.615850e-47 |
| Msa0133250 | Msa0577960 | 0.815558 | 8.693947e-52 | -8.615850e-47 |
| Msa0133250 | Msa0585810 | 0.817989 | 2.476714e-52 | -8.615850e-47 |
| Msa0133250 | Msa0619460 | 0.812341 | 4.452497e-51 | -8.615850e-47 |
| Msa0133250 | Msa0625550 | 0.816191 | 6.281136e-52 | -8.615850e-47 |
| Msa0133250 | Msa0632040 | 0.820215 | 7.714745e-53 | -8.615850e-47 |
| Msa0133250 | Msa0639260 | 0.810625 | 1.050519e-50 | -8.615850e-47 |
| Msa0133250 | Msa0644610 | 0.808234 | 3.422559e-50 | -8.615850e-47 |
| Msa0133250 | Msa0648190 | 0.804476 | 2.121011e-49 | -8.615850e-47 |
| Msa0133250 | Msa0648280 | 0.806630 | 7.494887e-50 | -8.615850e-47 |
| Msa0133250 | Msa0651340 | 0.802968 | 4.361807e-49 | -8.615850e-47 |
| Msa0133250 | Msa0651490 | 0.843932 | 1.033913e-58 | -8.615850e-47 |
| Msa0133250 | Msa0652220 | 0.801443 | 8.982371e-49 | -8.615850e-47 |
| Msa0133250 | Msa0659590 | 0.819118 | 1.373411e-52 | -8.615850e-47 |
| Msa0133250 | Msa0660160 | 0.800802 | 1.214762e-48 | -8.615850e-47 |
| Msa0133250 | Msa0662670 | 0.803598 | 3.229592e-49 | -8.615850e-47 |
| Msa0133250 | Msa0685810 | 0.810941 | 8.971925e-51 | -8.615850e-47 |
| Msa0133250 | Msa0691150 | 0.839837 | 1.247617e-57 | -8.615850e-47 |
| Msa0133250 | Msa0692710 | 0.812509 | 4.091381e-51 | -8.615850e-47 |
| Msa0133250 | Msa0703620 | 0.811722 | 6.073366e-51 | -8.615850e-47 |
| Msa0133250 | Msa0705710 | 0.803009 | 4.276371e-49 | -8.615850e-47 |
| Msa0133250 | Msa0708870 | 0.802415 | 5.670599e-49 | -8.615850e-47 |
| Msa0133250 | Msa0712100 | 0.816666 | 4.916087e-52 | -8.615850e-47 |
| Msa0133250 | Msa0721650 | 0.839304 | 1.717058e-57 | -8.615850e-47 |
| Msa0133250 | Msa0744070 | 0.802656 | 5.058643e-49 | -8.615850e-47 |
| Msa0133250 | Msa0761930 | 0.805337 | 1.401760e-49 | -8.615850e-47 |
| Msa0133250 | Msa0762390 | 0.800704 | 1.271934e-48 | -8.615850e-47 |
| Msa0133250 | Msa0762480 | 0.809123 | 2.210283e-50 | -8.615850e-47 |
| Msa0133250 | Msa0770050 | 0.802736 | 4.870161e-49 | -8.615850e-47 |
| Msa0133250 | Msa0779830 | 0.804280 | 2.330246e-49 | -8.615850e-47 |
| Msa0133250 | Msa0791700 | 0.814263 | 1.684198e-51 | -8.615850e-47 |
| Msa0133250 | Msa0793130 | 0.806239 | 9.059383e-50 | -8.615850e-47 |
| Msa0133250 | Msa0807170 | 0.817255 | 3.625770e-52 | -8.615850e-47 |
| Msa0133250 | Msa0816860 | 0.813984 | 1.940543e-51 | -8.615850e-47 |
| Msa0133250 | Msa0825300 | 0.802043 | 6.766329e-49 | -8.615850e-47 |
| Msa0133250 | Msa0833150 | 0.855230 | 7.252152e-62 | -8.615850e-47 |
| Msa0133250 | Msa0842370 | 0.815402 | 9.418280e-52 | -8.615850e-47 |
| Msa0133250 | Msa0854520 | 0.807671 | 4.510340e-50 | -8.615850e-47 |
| Msa0133250 | Msa0869320 | 0.808289 | 3.331365e-50 | -8.615850e-47 |
| Msa0133250 | Msa0898090 | 0.822910 | 1.839071e-53 | -8.615850e-47 |
| Msa0133250 | Msa0933050 | 0.816413 | 5.602126e-52 | -8.615850e-47 |
| Msa0133250 | Msa0933220 | 0.804994 | 1.653411e-49 | -8.615850e-47 |
| Msa0133250 | Msa0934290 | 0.812024 | 5.218773e-51 | -8.615850e-47 |
| Msa0133250 | Msa0956600 | 0.807460 | 5.001765e-50 | -8.615850e-47 |
| Msa0133250 | Msa0971780 | 0.808352 | 3.229948e-50 | -8.615850e-47 |
| Msa0133250 | Msa0974570 | 0.829804 | 4.192663e-55 | -8.615850e-47 |
| Msa0133250 | Msa0993590 | 0.809459 | 1.872719e-50 | -8.615850e-47 |
| Msa0133250 | Msa1015020 | 0.805939 | 1.047687e-49 | -8.615850e-47 |
| Msa0133250 | Msa1018210 | 0.837754 | 4.312085e-57 | -8.615850e-47 |
| Msa0133250 | Msa1029570 | 0.819502 | 1.123123e-52 | -8.615850e-47 |
| Msa0133250 | Msa1033460 | 0.813637 | 2.314013e-51 | -8.615850e-47 |
| Msa0133250 | Msa1046990 | 0.805379 | 1.373614e-49 | -8.615850e-47 |
| Msa0133250 | Msa1084340 | 0.814364 | 1.599366e-51 | -8.615850e-47 |
| Msa0133250 | Msa1113780 | 0.834430 | 3.010833e-56 | -8.615850e-47 |
| Msa0133250 | Msa1128230 | 0.802685 | 4.989503e-49 | -8.615850e-47 |
| Msa0133250 | Msa1134830 | 0.804054 | 2.596417e-49 | -8.615850e-47 |
| Msa0133250 | Msa1160470 | 0.816730 | 4.755747e-52 | -8.615850e-47 |
| Msa0133250 | Msa1177360 | 0.848541 | 5.740229e-60 | -8.615850e-47 |
| Msa0133250 | Msa1192790 | 0.844236 | 8.568160e-59 | -8.615850e-47 |
| Msa0133250 | Msa1203090 | 0.810620 | 1.052826e-50 | -8.615850e-47 |
| Msa0133250 | Msa1212070 | 0.803034 | 4.226665e-49 | -8.615850e-47 |
| Msa0133250 | Msa1218310 | 0.801410 | 9.124906e-49 | -8.615850e-47 |
| Msa0133250 | Msa1218350 | 0.816705 | 4.818000e-52 | -8.615850e-47 |
| Msa0133250 | Msa1219530 | 0.800310 | 1.530207e-48 | -8.615850e-47 |
| Msa0133250 | Msa1223600 | 0.802374 | 5.783671e-49 | -8.615850e-47 |
| Msa0133250 | Msa1225240 | 0.810800 | 9.625200e-51 | -8.615850e-47 |
| Msa0133250 | Msa1235960 | 0.821437 | 4.039607e-53 | -8.615850e-47 |
| Msa0133250 | Msa1235990 | 0.826207 | 3.079694e-54 | -8.615850e-47 |
| Msa0133250 | Msa1236190 | 0.800566 | 1.357106e-48 | -8.615850e-47 |
| Msa0133250 | Msa1236740 | 0.807806 | 4.222334e-50 | -8.615850e-47 |
| Msa0133250 | Msa1263460 | 0.815871 | 7.404030e-52 | -8.615850e-47 |
| Msa0133250 | Msa1267390 | 0.808212 | 3.460432e-50 | -8.615850e-47 |
| Msa0133250 | Msa1316090 | 0.818023 | 2.433644e-52 | -8.615850e-47 |
| Msa0133250 | Msa1327400 | 0.846331 | 2.323363e-59 | -8.615850e-47 |
| Msa0133250 | Msa1327420 | 0.846680 | 1.865366e-59 | -8.615850e-47 |
| Msa0133250 | Msa1344870 | 0.817418 | 3.331861e-52 | -8.615850e-47 |
| Msa0133250 | Msa1357090 | 0.832716 | 8.065113e-56 | -8.615850e-47 |
| Msa0133250 | Msa1369220 | 0.818904 | 1.536858e-52 | -8.615850e-47 |
| Msa0133250 | Msa1372470 | 0.801288 | 9.663088e-49 | -8.615850e-47 |
| Msa0133250 | Msa1373420 | 0.803950 | 2.729317e-49 | -8.615850e-47 |
| Msa0133250 | Msa1374210 | 0.807927 | 3.978594e-50 | -8.615850e-47 |
| Msa0133250 | Msa1377980 | 0.808462 | 3.060702e-50 | -8.615850e-47 |
| Msa0133250 | Msa1387650 | 0.820752 | 5.808267e-53 | -8.615850e-47 |
| Msa0133250 | Msa1405990 | 0.805668 | 1.194606e-49 | -8.615850e-47 |
| Msa0133250 | Msa1408280 | 0.808907 | 2.459377e-50 | -8.615850e-47 |
| Msa0133250 | Msa1409360 | 0.800931 | 1.143224e-48 | -8.615850e-47 |
| Msa0133250 | Msa1410770 | 0.828386 | 9.255777e-55 | -8.615850e-47 |
| Msa0133250 | Msa1414790 | 0.807003 | 6.250658e-50 | -8.615850e-47 |
| Msa0133250 | Msa1422770 | 0.862897 | 3.659307e-64 | -8.615850e-47 |
| Msa0133250 | Msa1424490 | 0.810777 | 9.737135e-51 | -8.615850e-47 |
| Msa0133250 | Msa1426690 | 0.830775 | 2.428336e-55 | -8.615850e-47 |
| Msa0133250 | Msa1428050 | 0.803050 | 4.193846e-49 | -8.615850e-47 |
| Msa0133250 | Msa1433060 | 0.843531 | 1.323287e-58 | -8.615850e-47 |
| Msa0133250 | Msa1448840 | 0.820023 | 8.539733e-53 | -8.615850e-47 |
| Msa0133250 | Msa1461840 | 0.800093 | 1.694364e-48 | -8.615850e-47 |
| Msa0133250 | Msa1464470 | 0.807271 | 5.484013e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133250 | MtrunA17_Chr1g0202731 | 92.070 | 227 | 18 | 0 | 259 | 485 | 346 | 572 | 6.64e-147 | 438 |
| Msa0133250 | MtrunA17_Chr1g0202731 | 79.377 | 257 | 32 | 4 | 1 | 257 | 1 | 236 | 6.40e-125 | 382 |
| Msa0133250 | MtrunA17_Chr1g0202731 | 97.826 | 46 | 1 | 0 | 486 | 531 | 662 | 707 | 2.21e-23 | 104 |
| Msa0133250 | MtrunA17_Chr1g0202741 | 89.474 | 228 | 24 | 0 | 258 | 485 | 340 | 567 | 2.15e-143 | 429 |
| Msa0133250 | MtrunA17_Chr1g0202741 | 64.173 | 254 | 68 | 5 | 4 | 257 | 1 | 231 | 3.44e-91 | 293 |
| Msa0133250 | MtrunA17_Chr1g0202741 | 86.957 | 46 | 6 | 0 | 486 | 531 | 657 | 702 | 1.49e-20 | 95.5 |
| Msa0133250 | MtrunA17_Chr8g0348531 | 57.940 | 233 | 96 | 2 | 258 | 489 | 354 | 585 | 7.99e-78 | 258 |
| Msa0133250 | MtrunA17_Chr8g0348531 | 41.202 | 233 | 105 | 5 | 28 | 254 | 36 | 242 | 7.22e-44 | 165 |
| Msa0133250 | MtrunA17_Chr8g0348531 | 63.043 | 46 | 17 | 0 | 486 | 531 | 671 | 716 | 1.37e-12 | 70.5 |
| Msa0133250 | MtrunA17_Chr8g0348521 | 58.120 | 234 | 93 | 4 | 258 | 489 | 341 | 571 | 1.19e-77 | 258 |
| Msa0133250 | MtrunA17_Chr8g0348521 | 38.672 | 256 | 129 | 5 | 6 | 257 | 1 | 232 | 9.58e-46 | 171 |
| Msa0133250 | MtrunA17_Chr8g0348521 | 63.043 | 46 | 17 | 0 | 486 | 531 | 656 | 701 | 2.22e-12 | 69.7 |
| Msa0133250 | MtrunA17_Chr8g0349071 | 55.102 | 196 | 84 | 3 | 258 | 451 | 110 | 303 | 1.01e-65 | 215 |
| Msa0133250 | MtrunA17_Chr4g0058571 | 30.579 | 242 | 148 | 7 | 259 | 487 | 354 | 588 | 7.93e-29 | 121 |
| Msa0133250 | MtrunA17_Chr2g0291481 | 29.362 | 235 | 154 | 4 | 259 | 481 | 367 | 601 | 5.00e-27 | 115 |
| Msa0133250 | MtrunA17_Chr2g0291481 | 37.121 | 132 | 75 | 2 | 129 | 256 | 128 | 255 | 9.21e-20 | 93.2 |
| Msa0133250 | MtrunA17_Chr4g0061441 | 29.240 | 171 | 100 | 5 | 258 | 409 | 563 | 731 | 6.17e-16 | 81.3 |
| Msa0133250 | MtrunA17_Chr3g0131361 | 31.111 | 135 | 70 | 3 | 258 | 371 | 612 | 744 | 3.08e-14 | 75.9 |
| Msa0133250 | MtrunA17_Chr8g0349081 | 62.222 | 45 | 17 | 0 | 487 | 531 | 77 | 121 | 4.24e-14 | 68.9 |
| Msa0133250 | MtrunA17_Chr2g0301511 | 32.812 | 128 | 65 | 5 | 258 | 366 | 632 | 757 | 3.64e-13 | 72.4 |
| Msa0133250 | MtrunA17_Chr3g0131381 | 29.078 | 141 | 76 | 2 | 258 | 376 | 619 | 757 | 5.63e-13 | 72.0 |
| Msa0133250 | MtrunA17_Chr8g0385411 | 28.676 | 136 | 71 | 3 | 258 | 369 | 604 | 737 | 6.81e-13 | 71.6 |
| Msa0133250 | MtrunA17_Chr7g0272591 | 30.075 | 133 | 70 | 3 | 258 | 369 | 608 | 738 | 1.55e-12 | 70.5 |
| Msa0133250 | MtrunA17_Chr3g0131401 | 27.206 | 136 | 73 | 3 | 258 | 369 | 625 | 758 | 1.06e-11 | 67.8 |
| Msa0133250 | MtrunA17_Chr8g0387591 | 29.508 | 122 | 62 | 3 | 261 | 362 | 646 | 763 | 2.15e-11 | 66.6 |
| Msa0133250 | MtrunA17_Chr1g0192121 | 26.119 | 134 | 75 | 3 | 258 | 369 | 595 | 726 | 2.49e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133250 | AT5G23990.3 | 55.285 | 246 | 108 | 2 | 258 | 502 | 200 | 444 | 1.14e-88 | 284 |
| Msa0133250 | AT5G23990.3 | 60.714 | 84 | 33 | 0 | 174 | 257 | 8 | 91 | 1.21e-26 | 114 |
| Msa0133250 | AT5G23990.3 | 44.444 | 117 | 54 | 4 | 416 | 531 | 461 | 567 | 2.98e-19 | 91.7 |
| Msa0133250 | AT5G23990.2 | 55.285 | 246 | 108 | 2 | 258 | 502 | 332 | 576 | 1.64e-87 | 284 |
| Msa0133250 | AT5G23990.2 | 43.033 | 244 | 109 | 6 | 14 | 256 | 8 | 222 | 5.45e-51 | 186 |
| Msa0133250 | AT5G23990.2 | 44.444 | 117 | 54 | 4 | 416 | 531 | 593 | 699 | 3.33e-19 | 91.7 |
| Msa0133250 | AT5G23990.1 | 55.285 | 246 | 108 | 2 | 258 | 502 | 290 | 534 | 1.92e-87 | 283 |
| Msa0133250 | AT5G23990.1 | 63.636 | 77 | 28 | 0 | 181 | 257 | 105 | 181 | 6.29e-25 | 109 |
| Msa0133250 | AT5G23990.1 | 44.444 | 117 | 54 | 4 | 416 | 531 | 551 | 657 | 4.70e-19 | 91.3 |
| Msa0133250 | AT5G23980.1 | 53.659 | 246 | 112 | 2 | 258 | 502 | 332 | 576 | 5.41e-85 | 278 |
| Msa0133250 | AT5G23980.1 | 45.238 | 252 | 107 | 8 | 14 | 264 | 8 | 229 | 4.78e-54 | 194 |
| Msa0133250 | AT5G23980.1 | 76.000 | 50 | 11 | 1 | 483 | 531 | 650 | 699 | 2.72e-17 | 85.9 |
| Msa0133250 | AT1G01580.1 | 54.167 | 240 | 108 | 2 | 259 | 496 | 360 | 599 | 1.27e-82 | 272 |
| Msa0133250 | AT1G01580.1 | 39.506 | 243 | 121 | 4 | 15 | 254 | 28 | 247 | 8.00e-45 | 169 |
| Msa0133250 | AT1G01580.1 | 63.265 | 49 | 18 | 0 | 483 | 531 | 677 | 725 | 2.69e-14 | 76.3 |
| Msa0133250 | AT1G01580.2 | 54.167 | 240 | 108 | 2 | 259 | 496 | 438 | 677 | 7.22e-82 | 271 |
| Msa0133250 | AT1G01580.2 | 39.095 | 243 | 122 | 4 | 15 | 254 | 106 | 325 | 1.44e-44 | 168 |
| Msa0133250 | AT1G01580.2 | 63.265 | 49 | 18 | 0 | 483 | 531 | 755 | 803 | 2.89e-14 | 76.3 |
| Msa0133250 | AT1G01590.1 | 52.766 | 235 | 104 | 3 | 259 | 486 | 351 | 585 | 3.24e-75 | 252 |
| Msa0133250 | AT1G01590.1 | 35.000 | 260 | 137 | 3 | 14 | 266 | 15 | 249 | 9.75e-46 | 171 |
| Msa0133250 | AT1G01590.1 | 55.102 | 49 | 22 | 0 | 483 | 531 | 656 | 704 | 8.44e-12 | 68.6 |
| Msa0133250 | AT1G23020.4 | 52.838 | 229 | 103 | 3 | 259 | 486 | 350 | 574 | 6.15e-69 | 234 |
| Msa0133250 | AT1G23020.4 | 35.458 | 251 | 130 | 5 | 14 | 257 | 15 | 240 | 2.91e-42 | 161 |
| Msa0133250 | AT1G23020.4 | 61.224 | 49 | 19 | 0 | 483 | 531 | 645 | 693 | 2.06e-12 | 70.5 |
| Msa0133250 | AT1G23020.3 | 52.838 | 229 | 103 | 3 | 259 | 486 | 350 | 574 | 6.15e-69 | 234 |
| Msa0133250 | AT1G23020.3 | 35.458 | 251 | 130 | 5 | 14 | 257 | 15 | 240 | 2.91e-42 | 161 |
| Msa0133250 | AT1G23020.3 | 61.224 | 49 | 19 | 0 | 483 | 531 | 645 | 693 | 2.06e-12 | 70.5 |
| Msa0133250 | AT1G23020.1 | 52.838 | 229 | 103 | 3 | 259 | 486 | 373 | 597 | 6.38e-69 | 235 |
| Msa0133250 | AT1G23020.1 | 35.458 | 251 | 130 | 5 | 14 | 257 | 38 | 263 | 3.25e-42 | 161 |
| Msa0133250 | AT1G23020.1 | 61.224 | 49 | 19 | 0 | 483 | 531 | 668 | 716 | 2.16e-12 | 70.1 |
| Msa0133250 | AT1G23020.5 | 52.838 | 229 | 103 | 3 | 259 | 486 | 373 | 597 | 6.38e-69 | 235 |
| Msa0133250 | AT1G23020.5 | 35.458 | 251 | 130 | 5 | 14 | 257 | 38 | 263 | 3.25e-42 | 161 |
| Msa0133250 | AT1G23020.5 | 61.224 | 49 | 19 | 0 | 483 | 531 | 668 | 716 | 2.16e-12 | 70.1 |
| Msa0133250 | AT1G23020.6 | 52.838 | 229 | 103 | 3 | 259 | 486 | 351 | 575 | 6.59e-69 | 234 |
| Msa0133250 | AT1G23020.6 | 35.857 | 251 | 130 | 4 | 14 | 257 | 15 | 241 | 2.42e-44 | 167 |
| Msa0133250 | AT1G23020.6 | 61.224 | 49 | 19 | 0 | 483 | 531 | 646 | 694 | 2.12e-12 | 70.1 |
| Msa0133250 | AT1G23020.2 | 52.838 | 229 | 103 | 3 | 259 | 486 | 374 | 598 | 6.62e-69 | 235 |
| Msa0133250 | AT1G23020.2 | 35.857 | 251 | 130 | 4 | 14 | 257 | 38 | 264 | 2.72e-44 | 167 |
| Msa0133250 | AT1G23020.2 | 61.224 | 49 | 19 | 0 | 483 | 531 | 669 | 717 | 2.18e-12 | 70.1 |
| Msa0133250 | AT1G23020.7 | 52.838 | 229 | 103 | 3 | 259 | 486 | 347 | 571 | 6.74e-69 | 234 |
| Msa0133250 | AT1G23020.7 | 34.677 | 248 | 127 | 3 | 14 | 254 | 15 | 234 | 5.12e-42 | 160 |
| Msa0133250 | AT1G23020.7 | 61.224 | 49 | 19 | 0 | 483 | 531 | 642 | 690 | 2.07e-12 | 70.5 |
| Msa0133250 | AT5G50160.2 | 31.579 | 285 | 159 | 10 | 208 | 478 | 122 | 384 | 1.52e-34 | 137 |
| Msa0133250 | AT5G50160.1 | 31.579 | 285 | 159 | 10 | 208 | 478 | 301 | 563 | 5.01e-34 | 137 |
| Msa0133250 | AT5G50160.1 | 26.908 | 249 | 151 | 9 | 23 | 269 | 19 | 238 | 3.31e-12 | 69.7 |
| Msa0133250 | AT5G49740.3 | 29.832 | 238 | 143 | 5 | 261 | 478 | 367 | 600 | 2.80e-24 | 107 |
| Msa0133250 | AT5G49740.3 | 29.944 | 177 | 108 | 5 | 129 | 297 | 125 | 293 | 4.83e-19 | 91.3 |
| Msa0133250 | AT5G49740.1 | 29.832 | 238 | 143 | 5 | 261 | 478 | 367 | 600 | 2.92e-24 | 107 |
| Msa0133250 | AT5G49740.1 | 31.206 | 141 | 92 | 2 | 129 | 266 | 125 | 263 | 4.82e-19 | 91.3 |
| Msa0133250 | AT5G49730.1 | 28.632 | 234 | 151 | 3 | 261 | 478 | 358 | 591 | 3.30e-22 | 101 |
| Msa0133250 | AT5G49730.1 | 32.571 | 175 | 106 | 4 | 129 | 297 | 116 | 284 | 7.46e-21 | 97.1 |
| Msa0133250 | AT5G49740.2 | 31.792 | 173 | 104 | 2 | 261 | 419 | 367 | 539 | 2.62e-21 | 97.8 |
| Msa0133250 | AT5G49740.2 | 29.944 | 177 | 108 | 5 | 129 | 297 | 125 | 293 | 4.45e-19 | 90.9 |
| Msa0133250 | AT5G49730.2 | 32.370 | 173 | 103 | 2 | 261 | 419 | 358 | 530 | 4.66e-21 | 97.1 |
| Msa0133250 | AT5G49730.2 | 32.571 | 175 | 106 | 4 | 129 | 297 | 116 | 284 | 5.33e-21 | 97.1 |
| Msa0133250 | AT4G25090.2 | 33.333 | 123 | 66 | 4 | 261 | 369 | 559 | 679 | 3.25e-14 | 76.3 |
| Msa0133250 | AT4G25090.1 | 34.188 | 117 | 61 | 4 | 267 | 369 | 577 | 691 | 3.34e-14 | 76.3 |
| Msa0133250 | AT4G11230.1 | 28.507 | 221 | 116 | 9 | 261 | 453 | 639 | 845 | 8.37e-14 | 75.1 |
| Msa0133250 | AT1G09090.2 | 31.061 | 132 | 68 | 3 | 258 | 368 | 561 | 690 | 4.76e-13 | 72.4 |
| Msa0133250 | AT1G19230.2 | 27.273 | 132 | 74 | 3 | 258 | 369 | 653 | 782 | 1.06e-12 | 71.6 |
| Msa0133250 | AT1G19230.1 | 27.273 | 132 | 74 | 3 | 258 | 369 | 627 | 756 | 1.07e-12 | 71.2 |
| Msa0133250 | AT1G64060.1 | 31.148 | 122 | 60 | 3 | 261 | 362 | 652 | 769 | 3.15e-12 | 70.1 |
| Msa0133250 | AT5G47910.1 | 28.226 | 124 | 68 | 2 | 258 | 362 | 638 | 759 | 3.15e-11 | 66.6 |
| Msa0133250 | AT5G51060.1 | 26.923 | 130 | 72 | 2 | 261 | 369 | 618 | 745 | 4.12e-11 | 66.2 |
Find 137 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTATGCTTCCTGTTTC+TGG | 0.029479 | 1_3:+64516251 | Msa0133250:CDS |
| CCAAGCCATAACCAGTTATT+TGG | 0.139470 | 1_3:-64516425 | None:intergenic |
| CAACTAGAAGTCACTGTAAA+AGG | 0.162417 | 1_3:-64514905 | None:intergenic |
| ACAAATATTACTATTATTAT+TGG | 0.185605 | 1_3:-64511883 | None:intergenic |
| TTGAATCAATCAGCTTTAAT+TGG | 0.229288 | 1_3:+64517069 | Msa0133250:CDS |
| ACCTCAGAAATTGTGCAGTA+TGG | 0.265531 | 1_3:-64515057 | None:intergenic |
| AGTGACTTCTAGTTGTAATA+TGG | 0.269203 | 1_3:+64514913 | Msa0133250:CDS |
| GAAACCGGTGTGTAAGTAAT+TGG | 0.280750 | 1_3:-64512670 | None:intergenic |
| TCTCCTATCTCAGGTGTATT+AGG | 0.286507 | 1_3:+64516401 | Msa0133250:CDS |
| GATTCCTCTATGTTATAATT+AGG | 0.290296 | 1_3:+64517164 | Msa0133250:three_prime_UTR |
| CTGGCTTGGACATTTATCTA+TGG | 0.290976 | 1_3:+64513005 | Msa0133250:CDS |
| GTTGCTAGAATTTGTGCTTC+TGG | 0.309657 | 1_3:+64517026 | Msa0133250:CDS |
| GGAACTTTCTTCTTCGACTT+TGG | 0.313524 | 1_3:+64514997 | Msa0133250:CDS |
| TTATATATAGCTAGTGCTTT+TGG | 0.319804 | 1_3:+64511488 | Msa0133250:five_prime_UTR |
| TCTTCTATTCTGCCTCTTGT+TGG | 0.326863 | 1_3:+64512949 | Msa0133250:CDS |
| CATAGATATAGTATATGTTT+TGG | 0.335606 | 1_3:+64512510 | Msa0133250:CDS |
| TAGAATTTGTGCTTCTGGTT+TGG | 0.336429 | 1_3:+64517031 | Msa0133250:CDS |
| TTCTTGGGTGGCTATCTGTT+TGG | 0.342819 | 1_3:+64512095 | Msa0133250:CDS |
| ACAAAATTAAGTGAAACTTT+TGG | 0.346777 | 1_3:-64517357 | None:intergenic |
| ATACAAACAAGTATGAGTTT+TGG | 0.350222 | 1_3:-64516197 | None:intergenic |
| TGTTTGCTGCACTCTTGATA+TGG | 0.359525 | 1_3:+64512640 | Msa0133250:CDS |
| ACATTCCCTATGATGTTCAT+TGG | 0.361666 | 1_3:+64512325 | Msa0133250:CDS |
| CTTCCTTAGACGTCCATTCC+TGG | 0.362695 | 1_3:+64512566 | Msa0133250:CDS |
| ATATTTGTCTTTACTTTGAC+TGG | 0.363874 | 1_3:+64511379 | None:intergenic |
| TAGGCCCAAATAACTGGTTA+TGG | 0.371532 | 1_3:+64516420 | Msa0133250:CDS |
| AGAGCTCCAATGAACATCAT+AGG | 0.372091 | 1_3:-64512331 | None:intergenic |
| CTTATATTCCATTATTGCTT+AGG | 0.373278 | 1_3:+64511632 | Msa0133250:five_prime_UTR |
| ATAAACAAATCAAAACTATA+TGG | 0.376001 | 1_3:+64516357 | Msa0133250:CDS |
| CATTGCAGCTTGGAAACCTT+TGG | 0.378460 | 1_3:-64514878 | None:intergenic |
| TTATCTGTATAATTCTTTCT+CGG | 0.379020 | 1_3:-64511708 | None:intergenic |
| AAGACACCACTATGTATATA+TGG | 0.382103 | 1_3:-64511927 | None:intergenic |
| GTGTATTAGGCCCAAATAAC+TGG | 0.386494 | 1_3:+64516414 | Msa0133250:CDS |
| ATAGGGTGTAGCAAATCTTT+TGG | 0.394432 | 1_3:+64511460 | Msa0133250:five_prime_UTR |
| CAAGCATCAAGTATCATATC+TGG | 0.397973 | 1_3:+64512986 | Msa0133250:CDS |
| GAGGTTGGAATTCTTGTTGT+TGG | 0.399373 | 1_3:-64516175 | None:intergenic |
| TGAGCTGTTGAGCCAGAAAC+AGG | 0.400901 | 1_3:-64516263 | None:intergenic |
| TAGTTGGTCTCACGGCTAAC+AGG | 0.416194 | 1_3:-64511834 | None:intergenic |
| CATCTTAATATTTCAGTTGA+AGG | 0.416390 | 1_3:+64515022 | Msa0133250:CDS |
| ATATACCTACCTCAATCATT+TGG | 0.418786 | 1_3:-64513080 | None:intergenic |
| ATACCATAGGCCGTAACAAC+AGG | 0.421219 | 1_3:-64511736 | None:intergenic |
| ATTGTGATCCTAAGCAATAA+TGG | 0.422095 | 1_3:-64511640 | None:intergenic |
| TCCCCTGTTGTTACGGCCTA+TGG | 0.422566 | 1_3:+64511733 | Msa0133250:five_prime_UTR |
| CCTCAGAAATTGTGCAGTAT+GGG | 0.426406 | 1_3:-64515056 | None:intergenic |
| CAAGCCATAACCAGTTATTT+GGG | 0.427027 | 1_3:-64516424 | None:intergenic |
| TAACCAGGAATGGACGTCTA+AGG | 0.428137 | 1_3:-64512569 | None:intergenic |
| TTCCTGGTTATGTCTCCAAT+TGG | 0.429119 | 1_3:+64512582 | Msa0133250:CDS |
| TTACATAGGAAATATATGTT+TGG | 0.429325 | 1_3:+64512897 | Msa0133250:CDS |
| GTTAGAAACGTGCAGCATAT+TGG | 0.439495 | 1_3:+64511437 | Msa0133250:five_prime_UTR |
| CTATATCTATGACTTCTAAA+GGG | 0.450980 | 1_3:-64512498 | None:intergenic |
| CTCAATCATTTGGTTGGTGA+TGG | 0.451931 | 1_3:-64513070 | None:intergenic |
| CTGGTCAAACAAGCTGTATC+AGG | 0.453029 | 1_3:+64514976 | Msa0133250:CDS |
| TGTTTATTAGCATCTCTTGA+AGG | 0.453374 | 1_3:-64516341 | None:intergenic |
| ATAGCTGAAACAATTCCAAT+TGG | 0.455667 | 1_3:-64512597 | None:intergenic |
| ACTATATCTATGACTTCTAA+AGG | 0.457044 | 1_3:-64512499 | None:intergenic |
| CTCTCAGATTCTCCTATCTC+AGG | 0.458926 | 1_3:+64516392 | Msa0133250:CDS |
| ATCTCGGATTATAGATATGA+AGG | 0.459405 | 1_3:-64516138 | None:intergenic |
| GCATAAGATCTAACATGGTT+AGG | 0.460957 | 1_3:-64516238 | None:intergenic |
| GGCTTTGAAATATGAGATCT+CGG | 0.466764 | 1_3:-64516154 | None:intergenic |
| GTCTAATTACTCGGTATAGT+TGG | 0.470743 | 1_3:-64511850 | None:intergenic |
| GATAAGGTCCCCTGTTGTTA+CGG | 0.471432 | 1_3:+64511726 | Msa0133250:five_prime_UTR |
| AATTGGAATTGTTTCAGCTA+TGG | 0.474439 | 1_3:+64512599 | Msa0133250:CDS |
| GGCGCTCTAAAGAGATGTTT+AGG | 0.475641 | 1_3:+64512543 | Msa0133250:CDS |
| TTCAATTCTACATACTTCAG+AGG | 0.486109 | 1_3:+64512175 | Msa0133250:CDS |
| TCTCTTTAGAGCGCCACTGC+TGG | 0.489094 | 1_3:-64512535 | None:intergenic |
| GGGCCTAATACACCTGAGAT+AGG | 0.494814 | 1_3:-64516404 | None:intergenic |
| TTTATGAACACCAAGCTTGT+GGG | 0.498876 | 1_3:-64514851 | None:intergenic |
| CATGCGGAGGTGATCGAAAC+CGG | 0.499697 | 1_3:-64512685 | None:intergenic |
| ATATACATTAATACATGTAC+AGG | 0.502760 | 1_3:-64517219 | None:intergenic |
| TGCACATATGTGCCTGTACA+TGG | 0.505523 | 1_3:+64517274 | Msa0133250:three_prime_UTR |
| ATCAAGTATCATATCTGGCT+TGG | 0.506171 | 1_3:+64512991 | Msa0133250:CDS |
| TCTTTGAGACTTGCTTACAT+AGG | 0.511722 | 1_3:+64512883 | Msa0133250:CDS |
| CCAAATAACTGGTTATGGCT+TGG | 0.512969 | 1_3:+64516425 | Msa0133250:CDS |
| AACTAGAAGTCACTGTAAAA+GGG | 0.514748 | 1_3:-64514904 | None:intergenic |
| TCATAGGGAATGTGAAAAGC+AGG | 0.518452 | 1_3:-64512315 | None:intergenic |
| ACCTACCTCAATCATTTGGT+TGG | 0.521125 | 1_3:-64513076 | None:intergenic |
| GAGAAAGAATTATACAGATA+AGG | 0.524059 | 1_3:+64511710 | Msa0133250:five_prime_UTR |
| GTGATGGTGAGTGGCGGAAG+TGG | 0.524506 | 1_3:+64516107 | Msa0133250:CDS |
| TCTCATCTTGTTTGTGCATG+CGG | 0.524678 | 1_3:-64512701 | None:intergenic |
| AAACGTGCAGCATATTGGAT+AGG | 0.524943 | 1_3:+64511442 | Msa0133250:five_prime_UTR |
| GAGCTCCAATGAACATCATA+GGG | 0.528983 | 1_3:-64512330 | None:intergenic |
| GGTGTTCATAAATGTTCCAA+AGG | 0.529380 | 1_3:+64514862 | Msa0133250:CDS |
| AAGACTTCTGTTGGTTACAA+TGG | 0.530051 | 1_3:-64511584 | None:intergenic |
| ATACTATAACCCCACAAGCT+TGG | 0.531979 | 1_3:+64514841 | Msa0133250:CDS |
| TTGTGCAGTATGGGGTCCGT+AGG | 0.532948 | 1_3:-64515047 | None:intergenic |
| TTCTTGTGATGTTTCTTGGG+TGG | 0.536413 | 1_3:+64512083 | Msa0133250:CDS |
| ATATACATTAATCCATGTAC+AGG | 0.536935 | 1_3:-64517286 | None:intergenic |
| ATTTATGAACACCAAGCTTG+TGG | 0.539444 | 1_3:-64514852 | None:intergenic |
| ATAATGGAATATAAGATATG+TGG | 0.540763 | 1_3:-64511624 | None:intergenic |
| AAAAGAGTGAAGACTTCTGT+TGG | 0.548873 | 1_3:-64511593 | None:intergenic |
| TATCCAATTGAAAATAACTC+AGG | 0.552964 | 1_3:+64516515 | Msa0133250:CDS |
| TATTTGTCTTTACTTTGACT+GGG | 0.553788 | 1_3:+64511380 | None:intergenic |
| GAGTGTGAAGGCAAAGATGT+TGG | 0.554752 | 1_3:+64516966 | Msa0133250:CDS |
| ATAGAAGACATTCTTGTGAC+CGG | 0.557709 | 1_3:-64512934 | None:intergenic |
| GTTTATATGTTCATATTGAG+TGG | 0.560587 | 1_3:+64517328 | Msa0133250:three_prime_UTR |
| TTCCAATTGGAGACATAACC+AGG | 0.560892 | 1_3:-64512584 | None:intergenic |
| CAAAGGTTTCCAAGCTGCAA+TGG | 0.560929 | 1_3:+64514879 | Msa0133250:CDS |
| TTACTGTGCTTAATATGTAG+TGG | 0.564531 | 1_3:-64511410 | None:intergenic |
| AACGTGCAGCATATTGGATA+GGG | 0.567635 | 1_3:+64511443 | Msa0133250:five_prime_UTR |
| TGTTGTTACGGCCTATGGTA+TGG | 0.568200 | 1_3:+64511738 | Msa0133250:five_prime_UTR |
| CCCATACTGCACAATTTCTG+AGG | 0.569211 | 1_3:+64515056 | Msa0133250:CDS |
| AAAAGGGTGCCATTGCAGCT+TGG | 0.569692 | 1_3:-64514888 | None:intergenic |
| ATTGGAGACATAACCAGGAA+TGG | 0.570760 | 1_3:-64512579 | None:intergenic |
| CGGTGTGTAAGTAATTGGAA+AGG | 0.580568 | 1_3:-64512665 | None:intergenic |
| GGTGTGTAAGTAATTGGAAA+GGG | 0.580721 | 1_3:-64512664 | None:intergenic |
| TCTACATACTTCAGAGGGCA+AGG | 0.581290 | 1_3:+64512181 | Msa0133250:CDS |
| CAGAAAAGTTGCCTTCCAGA+AGG | 0.582551 | 1_3:+64512392 | Msa0133250:CDS |
| TCAATTCTACATACTTCAGA+GGG | 0.584195 | 1_3:+64512176 | Msa0133250:CDS |
| ATTGCCTAATTATAACATAG+AGG | 0.587466 | 1_3:-64517168 | None:intergenic |
| CATCTTGTTTGTGCATGCGG+AGG | 0.588578 | 1_3:-64512698 | None:intergenic |
| GAAATTCTGTTTGAGTGTGA+AGG | 0.590229 | 1_3:+64516954 | Msa0133250:intron |
| CCAATAAATGATAAAACCAA+TGG | 0.595607 | 1_3:-64513046 | None:intergenic |
| ACTCGGTATAGTTGGTCTCA+CGG | 0.596382 | 1_3:-64511842 | None:intergenic |
| CATCACCAACCAAATGATTG+AGG | 0.598465 | 1_3:+64513071 | Msa0133250:CDS |
| TGTGCAGTATGGGGTCCGTA+GGG | 0.602330 | 1_3:-64515046 | None:intergenic |
| CAATCACCATATATACATAG+TGG | 0.603670 | 1_3:+64511921 | Msa0133250:five_prime_UTR |
| GAATTAACTAACCTTCTGGA+AGG | 0.607404 | 1_3:-64512403 | None:intergenic |
| GTGTCTCAAGTCTAATTACT+CGG | 0.607443 | 1_3:-64511859 | None:intergenic |
| TTAGATGGGAAGCAAAGTTG+AGG | 0.612295 | 1_3:+64512854 | Msa0133250:intron |
| ATTTCAGTTGAAGGACCCTA+CGG | 0.612975 | 1_3:+64515031 | Msa0133250:CDS |
| TGCATCGTGTAGAATATGAA+AGG | 0.613428 | 1_3:-64511968 | None:intergenic |
| CTCAGAAATTGTGCAGTATG+GGG | 0.616586 | 1_3:-64515055 | None:intergenic |
| TCTCGGATTATAGATATGAA+GGG | 0.617254 | 1_3:-64516137 | None:intergenic |
| TTATGAACACCAAGCTTGTG+GGG | 0.617409 | 1_3:-64514850 | None:intergenic |
| ATGGAATATAAGATATGTGG+AGG | 0.620433 | 1_3:-64511621 | None:intergenic |
| CTTTCCAATTACTTACACAC+CGG | 0.620526 | 1_3:+64512666 | Msa0133250:CDS |
| TATGCTCACAGCCATACCAT+AGG | 0.629729 | 1_3:-64511749 | None:intergenic |
| AGGAAGCATAAGATCTAACA+TGG | 0.631448 | 1_3:-64516243 | None:intergenic |
| GAGCAGATTGTGATGGTGAG+TGG | 0.645766 | 1_3:+64516098 | Msa0133250:CDS |
| TACCATAGGCCGTAACAACA+GGG | 0.648138 | 1_3:-64511735 | None:intergenic |
| TCAGATGTGAGTCCAACAAG+AGG | 0.651442 | 1_3:-64512961 | None:intergenic |
| GATGTTGGAGTTATGACTTG+TGG | 0.660013 | 1_3:+64516981 | Msa0133250:CDS |
| ACCAACCAAATGATTGAGGT+AGG | 0.660311 | 1_3:+64513075 | Msa0133250:CDS |
| CTGAGATAGGAGAATCTGAG+AGG | 0.686082 | 1_3:-64516391 | None:intergenic |
| CAGGCATGAGCAGATTGTGA+TGG | 0.694392 | 1_3:+64516091 | Msa0133250:intron |
| CGGCTAACAGGATACAACAG+CGG | 0.720650 | 1_3:-64511822 | None:intergenic |
| ACCATAGGCCGTAACAACAG+GGG | 0.722972 | 1_3:-64511734 | None:intergenic |
| CAGATTGTGATGGTGAGTGG+CGG | 0.723418 | 1_3:+64516101 | Msa0133250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATATTACTATTATTAT+TGG | - | chr1_3:64511886-64511905 | None:intergenic | 10.0% |
| !! | ATAAAGATTATTGTATAATT+TGG | + | chr1_3:64512808-64512827 | Msa0133250:intron | 10.0% |
| !!! | TTTTTATTTTCAAACATAAA+TGG | + | chr1_3:64513337-64513356 | Msa0133250:intron | 10.0% |
| !!! | TTTTATTTTCAAACATAAAT+GGG | + | chr1_3:64513338-64513357 | Msa0133250:intron | 10.0% |
| !! | GAAACTATTATTATTAATAA+TGG | + | chr1_3:64513367-64513386 | Msa0133250:intron | 10.0% |
| !!! | AGAAATATTTTTTTATTACT+CGG | - | chr1_3:64514753-64514772 | None:intergenic | 10.0% |
| !!! | TAACAAATTTATCATTTTTT+TGG | + | chr1_3:64514796-64514815 | Msa0133250:intron | 10.0% |
| !!! | TTTTTGTTTTATATTTTACT+CGG | + | chr1_3:64515985-64516004 | Msa0133250:intron | 10.0% |
| !!! | TTAATGTATATTTTATGATT+AGG | + | chr1_3:64517231-64517250 | Msa0133250:three_prime_UTR | 10.0% |
| !!! | TTATTTTTTCTTGATGAAAA+TGG | - | chr1_3:64512372-64512391 | None:intergenic | 15.0% |
| !! | ATTAAAGATTCAAGTAATTA+AGG | - | chr1_3:64512451-64512470 | None:intergenic | 15.0% |
| !!! | AATTGTCTTTTTTCTTTTTT+TGG | - | chr1_3:64513144-64513163 | None:intergenic | 15.0% |
| !! | ATATTGAATTCAAAATTATG+AGG | + | chr1_3:64513487-64513506 | Msa0133250:intron | 15.0% |
| !! | TTAAATATCATGAAATTAGT+TGG | + | chr1_3:64513636-64513655 | Msa0133250:intron | 15.0% |
| !! | TTACATAGTATTATACTATA+AGG | - | chr1_3:64513974-64513993 | None:intergenic | 15.0% |
| !! | TGAAAATAATGAAAATGTTA+TGG | - | chr1_3:64514016-64514035 | None:intergenic | 15.0% |
| !!! | ATAACATTTTCATTATTTTC+AGG | + | chr1_3:64514015-64514034 | Msa0133250:intron | 15.0% |
| !!! | GTATGTTAATAAACTATTTT+GGG | - | chr1_3:64514082-64514101 | None:intergenic | 15.0% |
| !!! | AGTATGTTAATAAACTATTT+TGG | - | chr1_3:64514083-64514102 | None:intergenic | 15.0% |
| !! | AAGAAAATCAAAACTTTATA+TGG | + | chr1_3:64514559-64514578 | Msa0133250:intron | 15.0% |
| !!! | ATAAATTTGTTAGTAAAACT+TGG | - | chr1_3:64514788-64514807 | None:intergenic | 15.0% |
| !! | GTAAAATATAAAACAAAAAC+AGG | - | chr1_3:64515984-64516003 | None:intergenic | 15.0% |
| !! | ATAAACAAATCAAAACTATA+TGG | + | chr1_3:64516357-64516376 | Msa0133250:CDS | 15.0% |
| !!! | ATAATGGAATATAAGATATG+TGG | - | chr1_3:64511627-64511646 | None:intergenic | 20.0% |
| !! | TTATCTGTATAATTCTTTCT+CGG | - | chr1_3:64511711-64511730 | None:intergenic | 20.0% |
| !!! | AGTAGTTCTTAACTTTTTTA+GGG | + | chr1_3:64512284-64512303 | Msa0133250:intron | 20.0% |
| !!! | CATAGATATAGTATATGTTT+TGG | + | chr1_3:64512510-64512529 | Msa0133250:CDS | 20.0% |
| !!! | TAATTTGGTGTATTGATTAT+TGG | + | chr1_3:64512823-64512842 | Msa0133250:intron | 20.0% |
| !! | TTACATAGGAAATATATGTT+TGG | + | chr1_3:64512897-64512916 | Msa0133250:CDS | 20.0% |
| !!! | CATTGGTTTTATCATTTATT+GGG | + | chr1_3:64513047-64513066 | Msa0133250:CDS | 20.0% |
| !! | TGAAATTCTGATTCATATTT+AGG | + | chr1_3:64513163-64513182 | Msa0133250:intron | 20.0% |
| !! | AAAATTATGAGGAAAAACAA+AGG | + | chr1_3:64513498-64513517 | Msa0133250:intron | 20.0% |
| !! | AAATTATGAGGAAAAACAAA+GGG | + | chr1_3:64513499-64513518 | Msa0133250:intron | 20.0% |
| !!! | TGTCATTTGTTTTTTACAAT+TGG | + | chr1_3:64513822-64513841 | Msa0133250:intron | 20.0% |
| !!! | GTCATTTGTTTTTTACAATT+GGG | + | chr1_3:64513823-64513842 | Msa0133250:intron | 20.0% |
| !! | GTAAATTACTTATCCAAATA+AGG | + | chr1_3:64513990-64514009 | Msa0133250:intron | 20.0% |
| !!! | AAAGTTTTGATTTTCTTACT+AGG | - | chr1_3:64514556-64514575 | None:intergenic | 20.0% |
| !! | AAAACTTTATATGGAAGAAT+AGG | + | chr1_3:64514568-64514587 | Msa0133250:intron | 20.0% |
| !! | ATATAGTACTGTAAATATGA+AGG | + | chr1_3:64515130-64515149 | Msa0133250:intron | 20.0% |
| !!! | AAATATGAAGGTTTTTATTG+TGG | + | chr1_3:64515142-64515161 | Msa0133250:intron | 20.0% |
| !!! | TTTTGAAAATACAAACAAGT+AGG | - | chr1_3:64515770-64515789 | None:intergenic | 20.0% |
| !! | ATTTATACTGTGGTAAAATA+AGG | + | chr1_3:64515838-64515857 | Msa0133250:intron | 20.0% |
| !! | GGTAAAATAAGGATAAATTA+CGG | + | chr1_3:64515849-64515868 | Msa0133250:intron | 20.0% |
| !! | ATATACATTAATACATGTAC+AGG | - | chr1_3:64517222-64517241 | None:intergenic | 20.0% |
| !! | TATAAACATGAAAAACATAG+AGG | - | chr1_3:64517315-64517334 | None:intergenic | 20.0% |
| !! | TTATATATAGCTAGTGCTTT+TGG | + | chr1_3:64511488-64511507 | Msa0133250:five_prime_UTR | 25.0% |
| ! | CTTATATTCCATTATTGCTT+AGG | + | chr1_3:64511632-64511651 | Msa0133250:five_prime_UTR | 25.0% |
| !! | TTCTTTCTTTTCTTAAACGT+TGG | + | chr1_3:64511671-64511690 | Msa0133250:five_prime_UTR | 25.0% |
| ! | GAGAAAGAATTATACAGATA+AGG | + | chr1_3:64511710-64511729 | Msa0133250:five_prime_UTR | 25.0% |
| ! | TCACAAGAAAAATGATTCTT+AGG | - | chr1_3:64512072-64512091 | None:intergenic | 25.0% |
| !! | ATTTTTCTTGTGATGTTTCT+TGG | + | chr1_3:64512079-64512098 | Msa0133250:CDS | 25.0% |
| !! | TTTTTCTTGTGATGTTTCTT+GGG | + | chr1_3:64512080-64512099 | Msa0133250:CDS | 25.0% |
| !! | ATCTTTTTGTAGATCTTAGT+AGG | - | chr1_3:64512130-64512149 | None:intergenic | 25.0% |
| ! | TAAGATCTACAAAAAGATCT+GGG | + | chr1_3:64512132-64512151 | Msa0133250:CDS | 25.0% |
| !!! | CAGTAGTTCTTAACTTTTTT+AGG | + | chr1_3:64512283-64512302 | Msa0133250:intron | 25.0% |
| !! | TTTAGAATTAACTAACCTTC+TGG | - | chr1_3:64512410-64512429 | None:intergenic | 25.0% |
| ! | CTATATCTATGACTTCTAAA+GGG | - | chr1_3:64512501-64512520 | None:intergenic | 25.0% |
| ! | ACTATATCTATGACTTCTAA+AGG | - | chr1_3:64512502-64512521 | None:intergenic | 25.0% |
| !!! | TTATTGGTCTTTGTATTAGA+TGG | + | chr1_3:64512839-64512858 | Msa0133250:intron | 25.0% |
| !!! | TATTGGTCTTTGTATTAGAT+GGG | + | chr1_3:64512840-64512859 | Msa0133250:intron | 25.0% |
| ! | CCAATAAATGATAAAACCAA+TGG | - | chr1_3:64513049-64513068 | None:intergenic | 25.0% |
| !!! | CCATTGGTTTTATCATTTAT+TGG | + | chr1_3:64513046-64513065 | Msa0133250:CDS | 25.0% |
| !!! | TACTGTACATGTTTTTTTGA+TGG | + | chr1_3:64513102-64513121 | Msa0133250:intron | 25.0% |
| !!! | ACTGTACATGTTTTTTTGAT+GGG | + | chr1_3:64513103-64513122 | Msa0133250:intron | 25.0% |
| !!! | TGTCTTTTTTCTTTTTTTGG+AGG | - | chr1_3:64513141-64513160 | None:intergenic | 25.0% |
| ! | CATATTTAGGTACTCTATTT+AGG | + | chr1_3:64513176-64513195 | Msa0133250:intron | 25.0% |
| ! | TTGAAATCCCATAATATATG+TGG | + | chr1_3:64513220-64513239 | Msa0133250:intron | 25.0% |
| ! | TAGCTACTAAACTTCATTAT+TGG | - | chr1_3:64513301-64513320 | None:intergenic | 25.0% |
| ! | TTTCAAACATAAATGGGTAA+AGG | + | chr1_3:64513344-64513363 | Msa0133250:intron | 25.0% |
| ! | TTCAAACATAAATGGGTAAA+GGG | + | chr1_3:64513345-64513364 | Msa0133250:intron | 25.0% |
| ! | AAATTGTTATATTGTGCAAG+AGG | - | chr1_3:64513461-64513480 | None:intergenic | 25.0% |
| ! | TGTTAACTAGAATTCTTGAT+TGG | - | chr1_3:64513543-64513562 | None:intergenic | 25.0% |
| ! | AAAGAACAAGCTATATTTAG+TGG | - | chr1_3:64513681-64513700 | None:intergenic | 25.0% |
| ! | ATTTACTACATCAAACTCAA+AGG | + | chr1_3:64513795-64513814 | Msa0133250:intron | 25.0% |
| !!! | TTGTTTTTTACAATTGGGAA+AGG | + | chr1_3:64513828-64513847 | Msa0133250:intron | 25.0% |
| !!! | TGTTTTTTACAATTGGGAAA+GGG | + | chr1_3:64513829-64513848 | Msa0133250:intron | 25.0% |
| !! | GTTTGACTTTGTAATTTCAA+GGG | - | chr1_3:64513921-64513940 | None:intergenic | 25.0% |
| !! | AGTTTGACTTTGTAATTTCA+AGG | - | chr1_3:64513922-64513941 | None:intergenic | 25.0% |
| ! | CATACTATATAAAGAGAGAT+TGG | + | chr1_3:64514097-64514116 | Msa0133250:intron | 25.0% |
| ! | CATATTAATGATCTTTCTGA+TGG | - | chr1_3:64514124-64514143 | None:intergenic | 25.0% |
| ! | TTTATATGGAAGAATAGGTT+TGG | + | chr1_3:64514573-64514592 | Msa0133250:intron | 25.0% |
| ! | TGGTATGTAATTCATATAGA+TGG | + | chr1_3:64514593-64514612 | Msa0133250:intron | 25.0% |
| ! | TTTGTTAGTAAAACTTGGTT+AGG | - | chr1_3:64514783-64514802 | None:intergenic | 25.0% |
| ! | TATAGTATAAACCTGAAGTT+AGG | - | chr1_3:64514829-64514848 | None:intergenic | 25.0% |
| ! | AGTATTGCCATAAAAAATGT+GGG | + | chr1_3:64514950-64514969 | Msa0133250:CDS | 25.0% |
| ! | CATCTTAATATTTCAGTTGA+AGG | + | chr1_3:64515022-64515041 | Msa0133250:CDS | 25.0% |
| ! | GATACTTCAAACTAATAACA+TGG | - | chr1_3:64515171-64515190 | None:intergenic | 25.0% |
| ! | CATATTTACCAACATTACAT+TGG | - | chr1_3:64515323-64515342 | None:intergenic | 25.0% |
| !! | TGTAATGTTGGTAAATATGA+AGG | + | chr1_3:64515324-64515343 | Msa0133250:intron | 25.0% |
| !! | GTAATGTTGGTAAATATGAA+GGG | + | chr1_3:64515325-64515344 | Msa0133250:intron | 25.0% |
| !! | TTGAGTATATGAATTTTTCG+CGG | + | chr1_3:64515400-64515419 | Msa0133250:intron | 25.0% |
| ! | TGTTTAAATGTGTTATGTTG+TGG | + | chr1_3:64515461-64515480 | Msa0133250:intron | 25.0% |
| ! | AAAACAGGCTAGATTTATAA+AGG | - | chr1_3:64515969-64515988 | None:intergenic | 25.0% |
| !! | ATACAAACAAGTATGAGTTT+TGG | - | chr1_3:64516200-64516219 | None:intergenic | 25.0% |
| ! | TATCCAATTGAAAATAACTC+AGG | + | chr1_3:64516515-64516534 | Msa0133250:CDS | 25.0% |
| !! | TTGAATCAATCAGCTTTAAT+TGG | + | chr1_3:64517069-64517088 | Msa0133250:CDS | 25.0% |
| !!! | ACATTTTAGAGGATAGTAAA+AGG | - | chr1_3:64517137-64517156 | None:intergenic | 25.0% |
| !! | AATCAACATGAACATTTTAG+AGG | - | chr1_3:64517148-64517167 | None:intergenic | 25.0% |
| ! | GATTCCTCTATGTTATAATT+AGG | + | chr1_3:64517164-64517183 | Msa0133250:three_prime_UTR | 25.0% |
| ! | ATTGCCTAATTATAACATAG+AGG | - | chr1_3:64517171-64517190 | None:intergenic | 25.0% |
| ! | ATATACATTAATCCATGTAC+AGG | - | chr1_3:64517289-64517308 | None:intergenic | 25.0% |
| ! | GTTTATATGTTCATATTGAG+TGG | + | chr1_3:64517328-64517347 | Msa0133250:three_prime_UTR | 25.0% |
| TTACTGTGCTTAATATGTAG+TGG | - | chr1_3:64511413-64511432 | None:intergenic | 30.0% | |
| ! | TTTTCTTTTGTGAAAGCAAG+TGG | + | chr1_3:64511544-64511563 | Msa0133250:five_prime_UTR | 30.0% |
| ! | TTTCTTTTGTGAAAGCAAGT+GGG | + | chr1_3:64511545-64511564 | Msa0133250:five_prime_UTR | 30.0% |
| ATGGAATATAAGATATGTGG+AGG | - | chr1_3:64511624-64511643 | None:intergenic | 30.0% | |
| ATTGTGATCCTAAGCAATAA+TGG | - | chr1_3:64511643-64511662 | None:intergenic | 30.0% | |
| CAATCACCATATATACATAG+TGG | + | chr1_3:64511921-64511940 | Msa0133250:five_prime_UTR | 30.0% | |
| AAGACACCACTATGTATATA+TGG | - | chr1_3:64511930-64511949 | None:intergenic | 30.0% | |
| CTAAGATCTACAAAAAGATC+TGG | + | chr1_3:64512131-64512150 | Msa0133250:CDS | 30.0% | |
| !!! | TTGAACTTGTTTTGTAGCAT+GGG | - | chr1_3:64512160-64512179 | None:intergenic | 30.0% |
| !!! | ATTGAACTTGTTTTGTAGCA+TGG | - | chr1_3:64512161-64512180 | None:intergenic | 30.0% |
| TTCAATTCTACATACTTCAG+AGG | + | chr1_3:64512175-64512194 | Msa0133250:CDS | 30.0% | |
| TCAATTCTACATACTTCAGA+GGG | + | chr1_3:64512176-64512195 | Msa0133250:CDS | 30.0% | |
| ATAGCTGAAACAATTCCAAT+TGG | - | chr1_3:64512600-64512619 | None:intergenic | 30.0% | |
| AATTGGAATTGTTTCAGCTA+TGG | + | chr1_3:64512599-64512618 | Msa0133250:CDS | 30.0% | |
| ! | TTTGGCATTTTTGTTCTTTC+CGG | + | chr1_3:64512915-64512934 | Msa0133250:CDS | 30.0% |
| ATATACCTACCTCAATCATT+TGG | - | chr1_3:64513083-64513102 | None:intergenic | 30.0% | |
| ! | TAGGTACTCTATTTAGGATA+AGG | + | chr1_3:64513182-64513201 | Msa0133250:intron | 30.0% |
| TTCCTTGCCACATATATTAT+GGG | - | chr1_3:64513230-64513249 | None:intergenic | 30.0% | |
| ATTCCTTGCCACATATATTA+TGG | - | chr1_3:64513231-64513250 | None:intergenic | 30.0% | |
| ATCTATTGTCTCTTTCTGTT+TGG | + | chr1_3:64513249-64513268 | Msa0133250:intron | 30.0% | |
| AATATATTCTCTCCTTCATC+TGG | + | chr1_3:64513272-64513291 | Msa0133250:intron | 30.0% | |
| AACCTTGAAAAGTTGTGAAA+TGG | - | chr1_3:64513405-64513424 | None:intergenic | 30.0% | |
| TACAAAGTCAAACTTCTAGA+AGG | + | chr1_3:64513928-64513947 | Msa0133250:intron | 30.0% | |
| !! | GAAAATGTTATGGCCTTATT+TGG | - | chr1_3:64514006-64514025 | None:intergenic | 30.0% |
| ! | ACATAGTTTTCAAAAACGAC+TGG | - | chr1_3:64514163-64514182 | None:intergenic | 30.0% |
| TGTAGATATATATGCATGAC+TGG | - | chr1_3:64514191-64514210 | None:intergenic | 30.0% | |
| ACATATGTATCAAATGTAGC+TGG | + | chr1_3:64514247-64514266 | Msa0133250:intron | 30.0% | |
| AGATATAGAGAATGTAGAGA+TGG | - | chr1_3:64514363-64514382 | None:intergenic | 30.0% | |
| ! | GATTTTCTTACTAGGATTCT+TGG | - | chr1_3:64514548-64514567 | None:intergenic | 30.0% |
| AGTAAAACTTGGTTAGGTAA+CGG | - | chr1_3:64514777-64514796 | None:intergenic | 30.0% | |
| TTGGTTTAATTCCTAACTTC+AGG | + | chr1_3:64514815-64514834 | Msa0133250:intron | 30.0% | |
| AACTAGAAGTCACTGTAAAA+GGG | - | chr1_3:64514907-64514926 | None:intergenic | 30.0% | |
| ! | AGTGACTTCTAGTTGTAATA+TGG | + | chr1_3:64514913-64514932 | Msa0133250:CDS | 30.0% |
| ! | GAGTATTGCCATAAAAAATG+TGG | + | chr1_3:64514949-64514968 | Msa0133250:CDS | 30.0% |
| ACACTTAACCCTCAATATAA+AGG | - | chr1_3:64515444-64515463 | None:intergenic | 30.0% | |
| AAAACAACCTAGATTTAACG+AGG | - | chr1_3:64515531-64515550 | None:intergenic | 30.0% | |
| ! | TCACGGATTATAGATATGAA+GGG | - | chr1_3:64515702-64515721 | None:intergenic | 30.0% |
| ! | ATCACGGATTATAGATATGA+AGG | - | chr1_3:64515703-64515722 | None:intergenic | 30.0% |
| ! | ATACAAACAAGTAGGAGTTT+TGG | - | chr1_3:64515762-64515781 | None:intergenic | 30.0% |
| ATAAGGATAAATTACGGTTG+CGG | + | chr1_3:64515855-64515874 | Msa0133250:intron | 30.0% | |
| ! | GGACTGCAATTTAAAACTAT+TGG | + | chr1_3:64515876-64515895 | Msa0133250:intron | 30.0% |
| ! | CAATTTAAAACTATTGGAGC+AGG | + | chr1_3:64515882-64515901 | Msa0133250:intron | 30.0% |
| !! | CATCATTCTATCTCTAAAAC+AGG | + | chr1_3:64516072-64516091 | Msa0133250:intron | 30.0% |
| TCTCGGATTATAGATATGAA+GGG | - | chr1_3:64516140-64516159 | None:intergenic | 30.0% | |
| ATCTCGGATTATAGATATGA+AGG | - | chr1_3:64516141-64516160 | None:intergenic | 30.0% | |
| TGTTTATTAGCATCTCTTGA+AGG | - | chr1_3:64516344-64516363 | None:intergenic | 30.0% | |
| ! | ATCATGTTTCTCCTCTTTTT+AGG | + | chr1_3:64516470-64516489 | Msa0133250:CDS | 30.0% |
| GAGTAACAATTCCTAAAAAG+AGG | - | chr1_3:64516484-64516503 | None:intergenic | 30.0% | |
| !! | TCACCTGAGTTATTTTCAAT+TGG | - | chr1_3:64516521-64516540 | None:intergenic | 30.0% |
| !!! | GTTCTAGTGTTGTTTTTCTT+TGG | + | chr1_3:64516606-64516625 | Msa0133250:intron | 30.0% |
| ! | CAAGCTACAAATGTACATTT+TGG | + | chr1_3:64516761-64516780 | Msa0133250:intron | 30.0% |
| TGTATCTTGTATCAATGAGA+TGG | + | chr1_3:64516904-64516923 | Msa0133250:intron | 30.0% | |
| !! | ACTTCATGTCTCATTTTTCT+TGG | - | chr1_3:64517008-64517027 | None:intergenic | 30.0% |
| ! | ATAGGGTGTAGCAAATCTTT+TGG | + | chr1_3:64511460-64511479 | Msa0133250:five_prime_UTR | 35.0% |
| ! | TTCTTTTGTGAAAGCAAGTG+GGG | + | chr1_3:64511546-64511565 | Msa0133250:five_prime_UTR | 35.0% |
| ! | AAGACTTCTGTTGGTTACAA+TGG | - | chr1_3:64511587-64511606 | None:intergenic | 35.0% |
| AAAAGAGTGAAGACTTCTGT+TGG | - | chr1_3:64511596-64511615 | None:intergenic | 35.0% | |
| GTCTAATTACTCGGTATAGT+TGG | - | chr1_3:64511853-64511872 | None:intergenic | 35.0% | |
| GTGTCTCAAGTCTAATTACT+CGG | - | chr1_3:64511862-64511881 | None:intergenic | 35.0% | |
| TGCATCGTGTAGAATATGAA+AGG | - | chr1_3:64511971-64511990 | None:intergenic | 35.0% | |
| ACATTCCCTATGATGTTCAT+TGG | + | chr1_3:64512325-64512344 | Msa0133250:CDS | 35.0% | |
| GAATTAACTAACCTTCTGGA+AGG | - | chr1_3:64512406-64512425 | None:intergenic | 35.0% | |
| ! | TCAAGTAATTAAGGCTAGCT+AGG | - | chr1_3:64512442-64512461 | None:intergenic | 35.0% |
| GGTGTGTAAGTAATTGGAAA+GGG | - | chr1_3:64512667-64512686 | None:intergenic | 35.0% | |
| CTTTCCAATTACTTACACAC+CGG | + | chr1_3:64512666-64512685 | Msa0133250:CDS | 35.0% | |
| !! | TCTTTGAGACTTGCTTACAT+AGG | + | chr1_3:64512883-64512902 | Msa0133250:CDS | 35.0% |
| ATAGAAGACATTCTTGTGAC+CGG | - | chr1_3:64512937-64512956 | None:intergenic | 35.0% | |
| CAAGCATCAAGTATCATATC+TGG | + | chr1_3:64512986-64513005 | Msa0133250:CDS | 35.0% | |
| ATCAAGTATCATATCTGGCT+TGG | + | chr1_3:64512991-64513010 | Msa0133250:CDS | 35.0% | |
| !!! | CTTTTTTCTGCTCATTCCAT+TGG | + | chr1_3:64513030-64513049 | Msa0133250:CDS | 35.0% |
| ATCCCATAATATATGTGGCA+AGG | + | chr1_3:64513225-64513244 | Msa0133250:intron | 35.0% | |
| ! | GACCATTTCACAACTTTTCA+AGG | + | chr1_3:64513400-64513419 | Msa0133250:intron | 35.0% |
| TAACAAGCATTCCACGAATA+AGG | + | chr1_3:64514305-64514324 | Msa0133250:intron | 35.0% | |
| !! | TACATTTTACGCCTTATTCG+TGG | - | chr1_3:64514319-64514338 | None:intergenic | 35.0% |
| TTATTCTATGCCATACATGC+TGG | + | chr1_3:64514382-64514401 | Msa0133250:intron | 35.0% | |
| ! | ATCTAAGGTGTCTATCAATG+AGG | - | chr1_3:64514450-64514469 | None:intergenic | 35.0% |
| TTTATGAACACCAAGCTTGT+GGG | - | chr1_3:64514854-64514873 | None:intergenic | 35.0% | |
| ATTTATGAACACCAAGCTTG+TGG | - | chr1_3:64514855-64514874 | None:intergenic | 35.0% | |
| GGTGTTCATAAATGTTCCAA+AGG | + | chr1_3:64514862-64514881 | Msa0133250:CDS | 35.0% | |
| CAACTAGAAGTCACTGTAAA+AGG | - | chr1_3:64514908-64514927 | None:intergenic | 35.0% | |
| !! | CACAATTTCTGAGGTTAGTT+TGG | + | chr1_3:64515065-64515084 | Msa0133250:intron | 35.0% |
| ! | CACATGTTTTCCATCTACAA+GGG | + | chr1_3:64515265-64515284 | Msa0133250:intron | 35.0% |
| GAAATCGAGACCTTACTTAA+GGG | + | chr1_3:64515290-64515309 | Msa0133250:intron | 35.0% | |
| GCTGCAAACCTTTATATTGA+GGG | + | chr1_3:64515433-64515452 | Msa0133250:intron | 35.0% | |
| !! | AGCTTTGAATTACGAGATCA+CGG | - | chr1_3:64515719-64515738 | None:intergenic | 35.0% |
| TGCTGCAAACATTTATACTG+TGG | + | chr1_3:64515828-64515847 | Msa0133250:intron | 35.0% | |
| ! | TTTAAAACTATTGGAGCAGG+CGG | + | chr1_3:64515885-64515904 | Msa0133250:intron | 35.0% |
| GACAATGTGATTACATTCCT+AGG | - | chr1_3:64515943-64515962 | None:intergenic | 35.0% | |
| CAGGCTAGATTTATAAAGGT+CGG | - | chr1_3:64515965-64515984 | None:intergenic | 35.0% | |
| !! | GGCTTTGAAATATGAGATCT+CGG | - | chr1_3:64516157-64516176 | None:intergenic | 35.0% |
| !! | CAAACAAGTATGAGTTTTGG+AGG | - | chr1_3:64516197-64516216 | None:intergenic | 35.0% |
| GCATAAGATCTAACATGGTT+AGG | - | chr1_3:64516241-64516260 | None:intergenic | 35.0% | |
| ! | AGGAAGCATAAGATCTAACA+TGG | - | chr1_3:64516246-64516265 | None:intergenic | 35.0% |
| CAAGCCATAACCAGTTATTT+GGG | - | chr1_3:64516427-64516446 | None:intergenic | 35.0% | |
| ACTCAGGTGAAGTTTATAAC+TGG | + | chr1_3:64516531-64516550 | Msa0133250:intron | 35.0% | |
| AAGTTTATAACTGGACCTAC+AGG | + | chr1_3:64516540-64516559 | Msa0133250:intron | 35.0% | |
| AGTTTATAACTGGACCTACA+GGG | + | chr1_3:64516541-64516560 | Msa0133250:intron | 35.0% | |
| ! | TTGTAGCTTGCACTAAAGAT+GGG | - | chr1_3:64516751-64516770 | None:intergenic | 35.0% |
| ! | TTTGTAGCTTGCACTAAAGA+TGG | - | chr1_3:64516752-64516771 | None:intergenic | 35.0% |
| GAAATTCTGTTTGAGTGTGA+AGG | + | chr1_3:64516954-64516973 | Msa0133250:intron | 35.0% | |
| ! | TAGAATTTGTGCTTCTGGTT+TGG | + | chr1_3:64517031-64517050 | Msa0133250:CDS | 35.0% |
| GTTAGAAACGTGCAGCATAT+TGG | + | chr1_3:64511437-64511456 | Msa0133250:five_prime_UTR | 40.0% | |
| AAACGTGCAGCATATTGGAT+AGG | + | chr1_3:64511442-64511461 | Msa0133250:five_prime_UTR | 40.0% | |
| AACGTGCAGCATATTGGATA+GGG | + | chr1_3:64511443-64511462 | Msa0133250:five_prime_UTR | 40.0% | |
| ! | GCTGTGAGCATATTTTATGC+AGG | + | chr1_3:64511760-64511779 | Msa0133250:five_prime_UTR | 40.0% |
| TTCTTGTGATGTTTCTTGGG+TGG | + | chr1_3:64512083-64512102 | Msa0133250:CDS | 40.0% | |
| TCATAGGGAATGTGAAAAGC+AGG | - | chr1_3:64512318-64512337 | None:intergenic | 40.0% | |
| GAGCTCCAATGAACATCATA+GGG | - | chr1_3:64512333-64512352 | None:intergenic | 40.0% | |
| AGAGCTCCAATGAACATCAT+AGG | - | chr1_3:64512334-64512353 | None:intergenic | 40.0% | |
| !!! | ATATGTTTTGGTTCCAGCAG+TGG | + | chr1_3:64512522-64512541 | Msa0133250:CDS | 40.0% |
| ATTGGAGACATAACCAGGAA+TGG | - | chr1_3:64512582-64512601 | None:intergenic | 40.0% | |
| TTCCTGGTTATGTCTCCAAT+TGG | + | chr1_3:64512582-64512601 | Msa0133250:CDS | 40.0% | |
| TTCCAATTGGAGACATAACC+AGG | - | chr1_3:64512587-64512606 | None:intergenic | 40.0% | |
| ! | TGTTTGCTGCACTCTTGATA+TGG | + | chr1_3:64512640-64512659 | Msa0133250:CDS | 40.0% |
| CGGTGTGTAAGTAATTGGAA+AGG | - | chr1_3:64512668-64512687 | None:intergenic | 40.0% | |
| GAAACCGGTGTGTAAGTAAT+TGG | - | chr1_3:64512673-64512692 | None:intergenic | 40.0% | |
| ! | TCTCATCTTGTTTGTGCATG+CGG | - | chr1_3:64512704-64512723 | None:intergenic | 40.0% |
| TTAGATGGGAAGCAAAGTTG+AGG | + | chr1_3:64512854-64512873 | Msa0133250:intron | 40.0% | |
| TCTTCTATTCTGCCTCTTGT+TGG | + | chr1_3:64512949-64512968 | Msa0133250:CDS | 40.0% | |
| !! | CTGGCTTGGACATTTATCTA+TGG | + | chr1_3:64513005-64513024 | Msa0133250:CDS | 40.0% |
| !! | CTCAATCATTTGGTTGGTGA+TGG | - | chr1_3:64513073-64513092 | None:intergenic | 40.0% |
| CATCACCAACCAAATGATTG+AGG | + | chr1_3:64513071-64513090 | Msa0133250:CDS | 40.0% | |
| ACCAACCAAATGATTGAGGT+AGG | + | chr1_3:64513075-64513094 | Msa0133250:CDS | 40.0% | |
| ACCTACCTCAATCATTTGGT+TGG | - | chr1_3:64513079-64513098 | None:intergenic | 40.0% | |
| ! | CATTATTGGTGTCCAGATGA+AGG | - | chr1_3:64513287-64513306 | None:intergenic | 40.0% |
| TGATTTCTCAGATGCTAGAG+TGG | + | chr1_3:64514218-64514237 | Msa0133250:intron | 40.0% | |
| GTTTAATAGCGTTAGCCATG+TGG | + | chr1_3:64514281-64514300 | Msa0133250:intron | 40.0% | |
| !! | TGGAATGCTTGTTATCCACA+TGG | - | chr1_3:64514299-64514318 | None:intergenic | 40.0% |
| ATGAGGAATAGGAAAATCCC+AGG | - | chr1_3:64514433-64514452 | None:intergenic | 40.0% | |
| GGTGTCTATCAATGAGGAAT+AGG | - | chr1_3:64514444-64514463 | None:intergenic | 40.0% | |
| GGCGAGATTGTAAGAATCTA+AGG | - | chr1_3:64514465-64514484 | None:intergenic | 40.0% | |
| ATACTATAACCCCACAAGCT+TGG | + | chr1_3:64514841-64514860 | Msa0133250:CDS | 40.0% | |
| TTATGAACACCAAGCTTGTG+GGG | - | chr1_3:64514853-64514872 | None:intergenic | 40.0% | |
| GGAACTTTCTTCTTCGACTT+TGG | + | chr1_3:64514997-64515016 | Msa0133250:CDS | 40.0% | |
| ATTTCAGTTGAAGGACCCTA+CGG | + | chr1_3:64515031-64515050 | Msa0133250:CDS | 40.0% | |
| CTCAGAAATTGTGCAGTATG+GGG | - | chr1_3:64515058-64515077 | None:intergenic | 40.0% | |
| CCTCAGAAATTGTGCAGTAT+GGG | - | chr1_3:64515059-64515078 | None:intergenic | 40.0% | |
| ACCTCAGAAATTGTGCAGTA+TGG | - | chr1_3:64515060-64515079 | None:intergenic | 40.0% | |
| GTAGATGGAAAACATGTGGT+CGG | - | chr1_3:64515263-64515282 | None:intergenic | 40.0% | |
| CCTTGTAGATGGAAAACATG+TGG | - | chr1_3:64515267-64515286 | None:intergenic | 40.0% | |
| ! | CCACATGTTTTCCATCTACA+AGG | + | chr1_3:64515264-64515283 | Msa0133250:intron | 40.0% |
| CGAAATCGAGACCTTACTTA+AGG | + | chr1_3:64515289-64515308 | Msa0133250:intron | 40.0% | |
| CGCTGCAAACCTTTATATTG+AGG | + | chr1_3:64515432-64515451 | Msa0133250:intron | 40.0% | |
| TGTCAGACCTCGTTAAATCT+AGG | + | chr1_3:64515521-64515540 | Msa0133250:intron | 40.0% | |
| TCATCGTTGTGTCTCTAAAC+AGG | + | chr1_3:64515634-64515653 | Msa0133250:intron | 40.0% | |
| !! | CAAACAAGTAGGAGTTTTGG+AGG | - | chr1_3:64515759-64515778 | None:intergenic | 40.0% |
| CTCGGTCTTTCTTCAGATTT+CGG | + | chr1_3:64516003-64516022 | Msa0133250:intron | 40.0% | |
| ! | GAGGTTGGAATTCTTGTTGT+TGG | - | chr1_3:64516178-64516197 | None:intergenic | 40.0% |
| !!! | CAAGTATGAGTTTTGGAGGT+TGG | - | chr1_3:64516193-64516212 | None:intergenic | 40.0% |
| GATCTTATGCTTCCTGTTTC+TGG | + | chr1_3:64516251-64516270 | Msa0133250:CDS | 40.0% | |
| TCTCCTATCTCAGGTGTATT+AGG | + | chr1_3:64516401-64516420 | Msa0133250:CDS | 40.0% | |
| GTGTATTAGGCCCAAATAAC+TGG | + | chr1_3:64516414-64516433 | Msa0133250:CDS | 40.0% | |
| TAGGCCCAAATAACTGGTTA+TGG | + | chr1_3:64516420-64516439 | Msa0133250:CDS | 40.0% | |
| CCAAGCCATAACCAGTTATT+TGG | - | chr1_3:64516428-64516447 | None:intergenic | 40.0% | |
| CCAAATAACTGGTTATGGCT+TGG | + | chr1_3:64516425-64516444 | Msa0133250:CDS | 40.0% | |
| TTACCAGGGTCATGGATTTA+TGG | + | chr1_3:64516695-64516714 | Msa0133250:intron | 40.0% | |
| GATGTTGGAGTTATGACTTG+TGG | + | chr1_3:64516981-64517000 | Msa0133250:CDS | 40.0% | |
| GTTGCTAGAATTTGTGCTTC+TGG | + | chr1_3:64517026-64517045 | Msa0133250:CDS | 40.0% | |
| GATAAGGTCCCCTGTTGTTA+CGG | + | chr1_3:64511726-64511745 | Msa0133250:five_prime_UTR | 45.0% | |
| TACCATAGGCCGTAACAACA+GGG | - | chr1_3:64511738-64511757 | None:intergenic | 45.0% | |
| ATACCATAGGCCGTAACAAC+AGG | - | chr1_3:64511739-64511758 | None:intergenic | 45.0% | |
| TGTTGTTACGGCCTATGGTA+TGG | + | chr1_3:64511738-64511757 | Msa0133250:five_prime_UTR | 45.0% | |
| TATGCTCACAGCCATACCAT+AGG | - | chr1_3:64511752-64511771 | None:intergenic | 45.0% | |
| ! | ACTCGGTATAGTTGGTCTCA+CGG | - | chr1_3:64511845-64511864 | None:intergenic | 45.0% |
| TTCTTGGGTGGCTATCTGTT+TGG | + | chr1_3:64512095-64512114 | Msa0133250:CDS | 45.0% | |
| TCTACATACTTCAGAGGGCA+AGG | + | chr1_3:64512181-64512200 | Msa0133250:CDS | 45.0% | |
| CAGAAAAGTTGCCTTCCAGA+AGG | + | chr1_3:64512392-64512411 | Msa0133250:CDS | 45.0% | |
| !! | GGCGCTCTAAAGAGATGTTT+AGG | + | chr1_3:64512543-64512562 | Msa0133250:CDS | 45.0% |
| TAACCAGGAATGGACGTCTA+AGG | - | chr1_3:64512572-64512591 | None:intergenic | 45.0% | |
| TCAGATGTGAGTCCAACAAG+AGG | - | chr1_3:64512964-64512983 | None:intergenic | 45.0% | |
| !! | CAAGAGGTGTCAACTACAAG+TGG | - | chr1_3:64513445-64513464 | None:intergenic | 45.0% |
| AAAGGCGAGCTGATAGTAAC+CGG | - | chr1_3:64514495-64514514 | None:intergenic | 45.0% | |
| !! | CAAGGGCATCACAAGGTAAA+AGG | - | chr1_3:64514513-64514532 | None:intergenic | 45.0% |
| CTTGGAGAAGTTGAGCTCAA+GGG | - | chr1_3:64514530-64514549 | None:intergenic | 45.0% | |
| TCTTGGAGAAGTTGAGCTCA+AGG | - | chr1_3:64514531-64514550 | None:intergenic | 45.0% | |
| CATTGCAGCTTGGAAACCTT+TGG | - | chr1_3:64514881-64514900 | None:intergenic | 45.0% | |
| CAAAGGTTTCCAAGCTGCAA+TGG | + | chr1_3:64514879-64514898 | Msa0133250:CDS | 45.0% | |
| !!! | CCAGCTGCCCACATTTTTTA+TGG | - | chr1_3:64514960-64514979 | None:intergenic | 45.0% |
| CCATAAAAAATGTGGGCAGC+TGG | + | chr1_3:64514957-64514976 | Msa0133250:CDS | 45.0% | |
| CTGGTCAAACAAGCTGTATC+AGG | + | chr1_3:64514976-64514995 | Msa0133250:CDS | 45.0% | |
| CCCATACTGCACAATTTCTG+AGG | + | chr1_3:64515056-64515075 | Msa0133250:CDS | 45.0% | |
| CCCTTGCGGAGATTAGTAAT+CGG | - | chr1_3:64515205-64515224 | None:intergenic | 45.0% | |
| CCGATTACTAATCTCCGCAA+GGG | + | chr1_3:64515202-64515221 | Msa0133250:intron | 45.0% | |
| ATCTGGCTGTCTACCTTTAG+TGG | + | chr1_3:64515226-64515245 | Msa0133250:intron | 45.0% | |
| TCTGGCTGTCTACCTTTAGT+GGG | + | chr1_3:64515227-64515246 | Msa0133250:intron | 45.0% | |
| TCGATTTCGACCCTTGTAGA+TGG | - | chr1_3:64515278-64515297 | None:intergenic | 45.0% | |
| GAGACCTTACTTAAGGGACT+CGG | + | chr1_3:64515296-64515315 | Msa0133250:intron | 45.0% | |
| GACTCGGACCAATGTAATGT+TGG | + | chr1_3:64515312-64515331 | Msa0133250:intron | 45.0% | |
| TTATGTTGTGGCCGCAATTG+CGG | + | chr1_3:64515473-64515492 | Msa0133250:intron | 45.0% | |
| CAGGCATGAACAGATTGTGA+TGG | + | chr1_3:64515653-64515672 | Msa0133250:intron | 45.0% | |
| ! | GAACAGATTGTGATGGTGAG+TGG | + | chr1_3:64515660-64515679 | Msa0133250:intron | 45.0% |
| GACGTTCATAGTTAAACCGC+TGG | + | chr1_3:64515796-64515815 | Msa0133250:intron | 45.0% | |
| TGCAGCATAAACAGAACCAG+CGG | - | chr1_3:64515815-64515834 | None:intergenic | 45.0% | |
| TTACATTCCTAGGAGCAGAG+CGG | - | chr1_3:64515933-64515952 | None:intergenic | 45.0% | |
| CTGAGATAGGAGAATCTGAG+AGG | - | chr1_3:64516394-64516413 | None:intergenic | 45.0% | |
| CTCTCAGATTCTCCTATCTC+AGG | + | chr1_3:64516392-64516411 | Msa0133250:CDS | 45.0% | |
| CATGTACCACATAACCCTGT+AGG | - | chr1_3:64516558-64516577 | None:intergenic | 45.0% | |
| CAACGCCAGAAAGATTACCA+GGG | + | chr1_3:64516681-64516700 | Msa0133250:intron | 45.0% | |
| CATGACCCTGGTAATCTTTC+TGG | - | chr1_3:64516689-64516708 | None:intergenic | 45.0% | |
| CAGAAAGATTACCAGGGTCA+TGG | + | chr1_3:64516687-64516706 | Msa0133250:intron | 45.0% | |
| GAACCATAAATCCATGACCC+TGG | - | chr1_3:64516701-64516720 | None:intergenic | 45.0% | |
| CCTCACTTACTCTTGAGATC+AGG | - | chr1_3:64516794-64516813 | None:intergenic | 45.0% | |
| CCTGATCTCAAGAGTAAGTG+AGG | + | chr1_3:64516791-64516810 | Msa0133250:intron | 45.0% | |
| GAGTGTGAAGGCAAAGATGT+TGG | + | chr1_3:64516966-64516985 | Msa0133250:CDS | 45.0% | |
| TGCACATATGTGCCTGTACA+TGG | + | chr1_3:64517274-64517293 | Msa0133250:three_prime_UTR | 45.0% | |
| ACCATAGGCCGTAACAACAG+GGG | - | chr1_3:64511737-64511756 | None:intergenic | 50.0% | |
| CGGCTAACAGGATACAACAG+CGG | - | chr1_3:64511825-64511844 | None:intergenic | 50.0% | |
| ! | TAGTTGGTCTCACGGCTAAC+AGG | - | chr1_3:64511837-64511856 | None:intergenic | 50.0% |
| CTTCCTTAGACGTCCATTCC+TGG | + | chr1_3:64512566-64512585 | Msa0133250:CDS | 50.0% | |
| ! | CATCTTGTTTGTGCATGCGG+AGG | - | chr1_3:64512701-64512720 | None:intergenic | 50.0% |
| GGATGCAACTCCAGCATGTA+TGG | - | chr1_3:64514395-64514414 | None:intergenic | 50.0% | |
| TCCATGTGCATGATTGCTCC+TGG | + | chr1_3:64514412-64514431 | Msa0133250:intron | 50.0% | |
| CCATGTGCATGATTGCTCCT+GGG | + | chr1_3:64514413-64514432 | Msa0133250:intron | 50.0% | |
| TACAATCTCGCCAACATGCC+CGG | + | chr1_3:64514473-64514492 | Msa0133250:intron | 50.0% | |
| CTGATAGTAACCGGGCATGT+TGG | - | chr1_3:64514486-64514505 | None:intergenic | 50.0% | |
| AAGGCGAGCTGATAGTAACC+GGG | - | chr1_3:64514494-64514513 | None:intergenic | 50.0% | |
| !! | TTGAGCTCAAGGGCATCACA+AGG | - | chr1_3:64514520-64514539 | None:intergenic | 50.0% |
| !! | AAAAGGGTGCCATTGCAGCT+TGG | - | chr1_3:64514891-64514910 | None:intergenic | 50.0% |
| GCCGATTACTAATCTCCGCA+AGG | + | chr1_3:64515201-64515220 | Msa0133250:intron | 50.0% | |
| CTAATCTCCGCAAGGGAATC+TGG | + | chr1_3:64515209-64515228 | Msa0133250:intron | 50.0% | |
| TAGACAGCCAGATTCCCTTG+CGG | - | chr1_3:64515219-64515238 | None:intergenic | 50.0% | |
| CTGGCTGTCTACCTTTAGTG+GGG | + | chr1_3:64515228-64515247 | Msa0133250:intron | 50.0% | |
| TGGTCCGAGTCCCTTAAGTA+AGG | - | chr1_3:64515303-64515322 | None:intergenic | 50.0% | |
| ! | CAGATTGTGATGGTGAGTGG+TGG | + | chr1_3:64515663-64515682 | Msa0133250:intron | 50.0% |
| CAGGCATGAGCAGATTGTGA+TGG | + | chr1_3:64516091-64516110 | Msa0133250:intron | 50.0% | |
| ! | GAGCAGATTGTGATGGTGAG+TGG | + | chr1_3:64516098-64516117 | Msa0133250:CDS | 50.0% |
| ! | CAGATTGTGATGGTGAGTGG+CGG | + | chr1_3:64515663-64515682 | Msa0133250:intron | 50.0% |
| TGAGCTGTTGAGCCAGAAAC+AGG | - | chr1_3:64516266-64516285 | None:intergenic | 50.0% | |
| GGGCCTAATACACCTGAGAT+AGG | - | chr1_3:64516407-64516426 | None:intergenic | 50.0% | |
| ACTGGACCTACAGGGTTATG+TGG | + | chr1_3:64516549-64516568 | Msa0133250:intron | 50.0% | |
| ! | CCTGGTAATCTTTCTGGCGT+TGG | - | chr1_3:64516683-64516702 | None:intergenic | 50.0% |
| CCAACGCCAGAAAGATTACC+AGG | + | chr1_3:64516680-64516699 | Msa0133250:intron | 50.0% | |
| GCACTAAAGATGGGCAAGGA+AGG | - | chr1_3:64516742-64516761 | None:intergenic | 50.0% | |
| GCTTGCACTAAAGATGGGCA+AGG | - | chr1_3:64516746-64516765 | None:intergenic | 50.0% | |
| TCCCCTGTTGTTACGGCCTA+TGG | + | chr1_3:64511733-64511752 | Msa0133250:five_prime_UTR | 55.0% | |
| !! | TCTCTTTAGAGCGCCACTGC+TGG | - | chr1_3:64512538-64512557 | None:intergenic | 55.0% |
| CATGCGGAGGTGATCGAAAC+CGG | - | chr1_3:64512688-64512707 | None:intergenic | 55.0% | |
| CCCAGGAGCAATCATGCACA+TGG | - | chr1_3:64514416-64514435 | None:intergenic | 55.0% | |
| TGTGCAGTATGGGGTCCGTA+GGG | - | chr1_3:64515049-64515068 | None:intergenic | 55.0% | |
| TTGTGCAGTATGGGGTCCGT+AGG | - | chr1_3:64515050-64515069 | None:intergenic | 55.0% | |
| GGAAAACATGTGGTCGGACG+AGG | - | chr1_3:64515257-64515276 | None:intergenic | 55.0% | |
| ACAGTCCGCAACCGCAATTG+CGG | - | chr1_3:64515487-64515506 | None:intergenic | 55.0% | |
| ! | GTGATGGTGAGTGGTGGAAG+TGG | + | chr1_3:64515669-64515688 | Msa0133250:intron | 55.0% |
| GATAAGTCTGCAGCTGCGTG+CGG | - | chr1_3:64516876-64516895 | None:intergenic | 55.0% | |
| GGACGAGGAGACCCCACTAA+AGG | - | chr1_3:64515242-64515261 | None:intergenic | 60.0% | |
| TGTGGCCGCAATTGCGGTTG+CGG | + | chr1_3:64515479-64515498 | Msa0133250:intron | 60.0% | |
| AACCTAGCCGCTCTGCTCCT+AGG | + | chr1_3:64515923-64515942 | Msa0133250:intron | 60.0% | |
| TTCCTAGGAGCAGAGCGGCT+AGG | - | chr1_3:64515928-64515947 | None:intergenic | 60.0% | |
| ! | GTGATGGTGAGTGGCGGAAG+TGG | + | chr1_3:64516107-64516126 | Msa0133250:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64511388 | 64517365 | 64511388 | ID=Msa0133250;Name=Msa0133250 |
| chr1_3 | mRNA | 64511388 | 64517365 | 64511388 | ID=Msa0133250-mRNA-1;Parent=Msa0133250;Name=Msa0133250-mRNA-1;_AED=0.28;_eAED=0.29;_QI=643|0.33|0.42|1|0.83|0.85|7|271|531 |
| chr1_3 | exon | 64511388 | 64512202 | 64511388 | ID=Msa0133250-mRNA-1:exon:21729;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64512286 | 64512413 | 64512286 | ID=Msa0133250-mRNA-1:exon:21730;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64512495 | 64512727 | 64512495 | ID=Msa0133250-mRNA-1:exon:21731;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64512858 | 64513096 | 64512858 | ID=Msa0133250-mRNA-1:exon:21732;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64514837 | 64515077 | 64514837 | ID=Msa0133250-mRNA-1:exon:21733;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64516094 | 64516536 | 64516094 | ID=Msa0133250-mRNA-1:exon:21734;Parent=Msa0133250-mRNA-1 |
| chr1_3 | exon | 64516955 | 64517365 | 64516955 | ID=Msa0133250-mRNA-1:exon:21735;Parent=Msa0133250-mRNA-1 |
| chr1_3 | five_prime_UTR | 64511388 | 64512030 | 64511388 | ID=Msa0133250-mRNA-1:five_prime_utr;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64512031 | 64512202 | 64512031 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64512286 | 64512413 | 64512286 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64512495 | 64512727 | 64512495 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64512858 | 64513096 | 64512858 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64514837 | 64515077 | 64514837 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64516094 | 64516536 | 64516094 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | CDS | 64516955 | 64517094 | 64516955 | ID=Msa0133250-mRNA-1:cds;Parent=Msa0133250-mRNA-1 |
| chr1_3 | three_prime_UTR | 64517095 | 64517365 | 64517095 | ID=Msa0133250-mRNA-1:three_prime_utr;Parent=Msa0133250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
