AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1084340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084340 MtrunA17_Chr7g0217231 92.570 323 18 4 17 337 20 338 1.13e-178 507
Msa1084340 MtrunA17_Chr7g0274821 97.835 231 5 0 335 565 137 367 2.31e-163 469
Msa1084340 MtrunA17_Chr1g0190011 66.520 227 74 2 335 560 103 328 5.22e-99 303
Msa1084340 MtrunA17_Chr6g0453231 63.218 261 79 6 35 286 36 288 5.06e-76 244
Msa1084340 MtrunA17_Chr1g0188441 44.828 203 86 6 84 282 6 186 2.48e-50 171
Msa1084340 MtrunA17_Chr3g0133181 43.810 210 90 6 84 280 77 271 1.08e-45 162
Msa1084340 MtrunA17_Chr5g0404271 43.062 209 100 7 85 283 97 296 2.59e-45 162
Msa1084340 MtrunA17_Chr5g0412501 44.811 212 83 7 87 282 78 271 4.27e-44 157
Msa1084340 MtrunA17_Chr4g0076821 41.350 237 97 10 87 283 113 347 1.41e-42 156
Msa1084340 MtrunA17_Chr5g0427051 40.179 224 98 6 84 282 55 267 1.09e-41 151
Msa1084340 MtrunA17_Chr2g0315941 38.785 214 99 6 87 282 68 267 1.09e-36 137
Msa1084340 MtrunA17_Chr1g0179461 53.279 122 53 2 337 454 141 262 1.92e-33 131
Msa1084340 MtrunA17_Chr8g0367691 38.191 199 112 4 87 278 69 263 1.18e-32 126
Msa1084340 MtrunA17_Chr5g0397551 42.188 192 88 7 334 503 127 317 3.75e-31 123
Msa1084340 MtrunA17_Chr7g0245841 53.906 128 56 1 336 460 122 249 1.35e-29 119
Msa1084340 MtrunA17_Chr8g0351761 38.393 224 108 7 338 543 139 350 5.07e-29 118
Msa1084340 MtrunA17_Chr6g0479901 35.751 193 72 5 87 278 19 160 1.78e-28 112
Msa1084340 MtrunA17_Chr1g0188211 53.279 122 53 2 336 454 129 249 2.05e-28 116
Msa1084340 MtrunA17_Chr4g0054661 46.512 129 65 2 331 456 132 259 6.17e-28 114
Msa1084340 MtrunA17_Chr6g0476061 49.167 120 58 1 338 454 127 246 9.01e-28 114
Msa1084340 MtrunA17_Chr7g0247431 45.455 143 69 2 334 467 150 292 3.42e-27 112
Msa1084340 MtrunA17_Chr8g0349091 51.969 127 58 1 336 459 150 276 1.77e-26 110
Msa1084340 MtrunA17_Chr8g0386741 40.127 157 82 4 336 481 161 316 3.96e-26 109
Msa1084340 MtrunA17_Chr8g0361671 75.410 61 15 0 84 144 61 121 1.40e-25 108
Msa1084340 MtrunA17_Chr5g0398621 46.281 121 58 2 341 454 97 217 1.33e-24 102
Msa1084340 MtrunA17_Chr4g0056761 51.181 127 58 1 336 458 139 265 6.69e-24 102
Msa1084340 MtrunA17_Chr4g0027371 44.961 129 61 3 333 453 11 137 1.65e-21 94.0
Msa1084340 MtrunA17_Chr1g0168121 44.248 113 63 0 341 453 69 181 2.04e-21 94.4
Msa1084340 MtrunA17_Chr4g0027351 44.094 127 63 3 324 448 8 128 7.02e-21 89.0
Msa1084340 MtrunA17_Chr4g0027331 42.308 130 63 4 324 447 8 131 9.72e-21 88.6
Msa1084340 MtrunA17_Chr8g0357741 59.701 67 26 1 216 282 31 96 5.48e-20 85.1
Msa1084340 MtrunA17_Chr3g0112131 40.351 114 68 0 340 453 105 218 7.12e-19 87.8
Msa1084340 MtrunA17_Chr1g0190051 46.903 113 60 0 341 453 101 213 1.37e-18 86.7
Msa1084340 MtrunA17_Chr3g0092371 59.155 71 21 3 85 155 18 80 2.46e-18 80.1
Msa1084340 MtrunA17_Chr6g0476241 35.669 157 89 4 297 453 143 287 1.90e-17 83.6
Msa1084340 MtrunA17_Chr8g0351651 37.600 125 75 1 329 453 104 225 3.36e-17 82.8
Msa1084340 MtrunA17_Chr3g0133051 35.043 117 72 2 341 453 101 217 5.49e-17 81.6
Msa1084340 MtrunA17_Chr5g0398531 37.600 125 75 1 329 453 118 239 1.20e-16 81.3
Msa1084340 MtrunA17_Chr5g0427311 31.746 126 83 2 331 453 70 195 1.55e-16 79.3
Msa1084340 MtrunA17_Chr6g0453221 58.929 56 17 1 82 137 16 65 2.70e-16 74.3
Msa1084340 MtrunA17_Chr5g0417581 33.728 169 85 5 338 482 16 181 9.07e-16 76.3
Msa1084340 MtrunA17_Chr7g0250031 39.823 113 68 0 341 453 84 196 1.13e-15 77.4
Msa1084340 MtrunA17_Chr4g0054651 39.823 113 68 0 341 453 103 215 1.66e-15 77.4
Msa1084340 MtrunA17_Chr4g0060731 50.000 64 27 1 75 138 13 71 5.47e-15 70.1
Msa1084340 MtrunA17_Chr5g0443311 35.714 126 78 1 329 454 69 191 1.36e-14 73.9
Msa1084340 MtrunA17_Chr4g0027301 38.655 119 63 3 338 448 23 139 1.54e-14 71.2
Msa1084340 MtrunA17_Chr1g0165101 34.839 155 79 5 331 466 140 291 3.53e-14 74.3
Msa1084340 MtrunA17_Chr5g0435681 34.513 113 74 0 341 453 116 228 6.46e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084340 AT5G15210.1 50.769 260 96 8 22 276 3 235 2.04e-68 222
Msa1084340 AT3G04590.2 52.400 250 97 8 335 565 165 411 4.43e-67 223
Msa1084340 AT1G69600.1 53.659 205 67 5 85 279 29 215 3.23e-62 205
Msa1084340 AT3G28920.1 48.684 304 106 10 22 298 1 281 5.30e-59 199
Msa1084340 AT3G04590.1 63.380 142 50 2 335 474 165 306 4.69e-52 181
Msa1084340 AT1G14440.1 43.363 226 105 5 82 298 85 296 2.95e-50 176
Msa1084340 AT1G14440.2 43.363 226 105 5 82 298 85 296 2.95e-50 176
Msa1084340 AT5G39760.1 50.187 267 98 8 32 283 17 263 5.38e-50 176
Msa1084340 AT2G02540.2 42.152 223 108 6 84 294 84 297 1.09e-47 169
Msa1084340 AT2G02540.1 42.152 223 108 6 84 294 84 297 1.09e-47 169
Msa1084340 AT4G24660.1 45.455 198 83 4 85 282 47 219 4.27e-47 164
Msa1084340 AT4G24660.2 45.641 195 81 4 85 279 47 216 2.78e-46 162
Msa1084340 AT5G60480.1 43.939 198 78 5 84 276 34 203 3.96e-46 162
Msa1084340 AT5G28590.1 46.818 220 76 7 338 547 27 215 8.96e-44 155
Msa1084340 AT1G75240.1 38.136 236 105 4 82 281 71 301 1.10e-41 152
Msa1084340 AT5G65410.1 43.655 197 94 5 85 281 73 252 1.99e-41 151
Msa1084340 AT4G25320.1 57.025 121 49 1 337 454 162 282 3.26e-38 145
Msa1084340 AT2G18350.1 39.899 198 100 4 87 283 82 261 4.86e-38 141
Msa1084340 AT4G12080.1 43.889 180 92 4 336 509 165 341 5.62e-37 141
Msa1084340 AT2G33620.1 49.630 135 65 1 329 460 151 285 2.74e-34 133
Msa1084340 AT2G33620.4 49.630 135 65 1 329 460 151 285 2.74e-34 133
Msa1084340 AT2G33620.2 49.630 135 65 1 329 460 151 285 2.74e-34 133
Msa1084340 AT2G33620.3 49.630 135 65 1 329 460 151 285 2.74e-34 133
Msa1084340 AT5G51590.1 55.556 117 49 1 341 454 178 294 3.86e-34 134
Msa1084340 AT3G50890.1 38.208 212 104 8 87 293 60 249 2.19e-33 128
Msa1084340 AT2G45850.1 50.000 130 62 1 336 462 157 286 5.01e-33 129
Msa1084340 AT2G45850.2 50.000 130 62 1 336 462 157 286 5.01e-33 129
Msa1084340 AT5G62260.1 50.000 122 58 1 337 455 156 277 5.17e-32 128
Msa1084340 AT5G62260.3 50.000 122 58 1 337 455 156 277 5.17e-32 128
Msa1084340 AT4G17950.1 44.304 158 79 3 335 487 215 368 1.28e-30 124
Msa1084340 AT2G45850.3 49.587 121 58 1 336 453 157 277 4.00e-30 119
Msa1084340 AT5G62260.2 51.304 115 53 1 337 448 156 270 4.23e-30 120
Msa1084340 AT1G63470.1 48.387 124 60 2 334 454 170 292 1.02e-28 118
Msa1084340 AT1G63480.5 47.328 131 65 2 334 461 147 276 1.32e-27 114
Msa1084340 AT1G63480.7 47.328 131 65 2 334 461 147 276 1.32e-27 114
Msa1084340 AT1G63480.4 47.328 131 65 2 334 461 147 276 1.32e-27 114
Msa1084340 AT1G63480.3 47.328 131 65 2 334 461 147 276 1.32e-27 114
Msa1084340 AT1G63480.6 47.328 131 65 2 334 461 147 276 1.32e-27 114
Msa1084340 AT1G63480.2 47.328 131 65 2 334 461 153 282 1.65e-27 114
Msa1084340 AT1G63480.1 47.328 131 65 2 334 461 153 282 1.65e-27 114
Msa1084340 AT4G00200.2 52.033 123 56 1 341 460 123 245 2.35e-27 113
Msa1084340 AT4G00200.1 52.033 123 56 1 341 460 123 245 2.35e-27 113
Msa1084340 AT5G46640.1 46.795 156 78 2 335 487 174 327 5.26e-27 113
Msa1084340 AT4G22770.2 49.180 122 59 1 336 454 145 266 6.27e-27 112
Msa1084340 AT4G22770.1 49.180 122 59 1 336 454 145 266 6.27e-27 112
Msa1084340 AT3G61310.1 50.000 122 58 1 336 454 159 280 4.02e-25 107
Msa1084340 AT1G74660.1 53.521 71 25 2 85 155 37 99 9.82e-19 82.0
Msa1084340 AT3G60870.1 34.400 125 77 2 329 453 77 196 1.29e-18 86.7
Msa1084340 AT1G74660.2 61.111 54 19 1 85 138 37 88 2.42e-18 80.9
Msa1084340 AT1G18835.1 54.930 71 21 2 85 155 24 83 1.97e-17 77.8
Msa1084340 AT5G49700.1 35.833 120 70 2 341 453 83 202 6.22e-17 81.6
Msa1084340 AT3G28917.1 61.404 57 21 1 84 140 30 85 1.11e-16 76.3
Msa1084340 AT1G76500.1 36.885 122 68 1 341 453 99 220 1.44e-16 81.3
Msa1084340 AT4G14465.1 40.708 113 67 0 341 453 94 206 2.42e-16 80.1
Msa1084340 AT3G04570.1 37.705 122 68 1 340 453 106 227 8.77e-15 75.9
Msa1084340 AT3G55560.1 38.596 114 69 1 341 453 115 228 8.84e-15 75.9
Msa1084340 AT5G42780.1 29.902 204 103 7 87 279 64 238 1.88e-14 73.6
Msa1084340 AT1G14490.2 31.667 120 75 2 341 453 49 168 4.19e-14 72.4
Msa1084340 AT2G45430.1 35.659 129 76 2 329 453 107 232 4.69e-14 73.9
Msa1084340 AT4G12050.1 35.714 126 77 2 329 453 136 258 5.53e-14 73.9
Msa1084340 AT4G22810.1 35.156 128 77 2 329 453 123 247 5.72e-14 73.6
Msa1084340 AT1G14490.1 31.933 119 74 2 342 453 31 149 7.67e-14 71.2
Msa1084340 AT4G17800.1 36.283 113 72 0 341 453 109 221 5.95e-13 70.1
Msa1084340 AT4G35390.1 37.391 115 70 1 341 453 90 204 7.10e-13 70.1
Msa1084340 AT1G14687.1 50.000 56 21 2 82 137 2 50 1.01e-12 67.0
Msa1084340 AT2G42940.1 35.965 114 73 0 341 454 80 193 1.89e-12 68.2
Msa1084340 AT2G36560.1 31.148 122 79 3 338 454 102 223 2.13e-12 70.1
Msa1084340 AT2G35270.1 35.398 113 73 0 341 453 105 217 3.82e-12 67.8

Find 204 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATATCATTTCGCTTAC+TGG 0.137983 7_2:+84663174 Msa1084340:CDS
GAACTGGACCAGCAGCTTTA+AGG 0.151788 7_2:-84663296 None:intergenic
TGCAATTTATGCAACAAAAT+AGG 0.176992 7_2:+84662205 Msa1084340:CDS
GTGGTGTTGGTGTTGGAGTT+GGG 0.196157 7_2:-84655677 None:intergenic
GCAATTTATGCAACAAAATA+GGG 0.199709 7_2:+84662206 Msa1084340:CDS
ACAATTCTAGAAAGCGTTTC+AGG 0.216225 7_2:+84656309 Msa1084340:CDS
CAAATTCTCAATCAGGAATT+TGG 0.241504 7_2:-84664175 None:intergenic
TTGAGAACACCATTTGAAAA+AGG 0.255600 7_2:-84655825 None:intergenic
CGGATGGCGCATACTATAAA+TGG 0.259174 7_2:-84664284 None:intergenic
GGTGGTGTTGGTGTTGGAGT+TGG 0.272963 7_2:-84655678 None:intergenic
AGGGGCGGAGGGGTAGTAAG+AGG 0.274253 7_2:-84656204 None:intergenic
TGCTCTCTCCGCCGCCTTAC+CGG 0.274469 7_2:+84656238 Msa1084340:CDS
GGTGGTGGTGAGGAGGAATT+TGG 0.278567 7_2:-84656173 None:intergenic
TCAGTTTCATGTTGTTGTTC+TGG 0.293454 7_2:-84655759 None:intergenic
CTCCGTCAACCAGCATCTTC+AGG 0.315212 7_2:+84662276 Msa1084340:CDS
GTGGAAAGTGGTGGTTCTTC+AGG 0.318129 7_2:-84656074 None:intergenic
TAATATTCTCATTGTTGTTA+AGG 0.328995 7_2:-84656511 None:intergenic
TGGTGTTGGAGTTGGGGTTA+AGG 0.330499 7_2:-84655670 None:intergenic
TGTTGTTGAGGTTGTTAATA+TGG 0.330756 7_2:-84655721 None:intergenic
ATCGTAGTGTTCTTAAGGTT+TGG 0.334173 7_2:+84656450 Msa1084340:CDS
GAGACATTCTTTGTAGGTTA+TGG 0.340619 7_2:-84655910 None:intergenic
GGTTGAAGTGGTGGTGGTGG+TGG 0.346158 7_2:-84655857 None:intergenic
TTCATCAACATGGTTTGGTT+TGG 0.350778 7_2:-84656275 None:intergenic
TGTTGATCGTAGTGTTCTTA+AGG 0.355414 7_2:+84656445 Msa1084340:CDS
TACCTATACCATGATAAATA+AGG 0.371169 7_2:+84664453 Msa1084340:three_prime_UTR
TATATTTCCCTTCCGTTTCA+AGG 0.373603 7_2:+84664520 Msa1084340:three_prime_UTR
CAGAATGAAGGTGGAGTTGT+TGG 0.373866 7_2:+84656620 Msa1084340:CDS
TATGGTAGGTTGATGGTTGT+TGG 0.374043 7_2:-84655892 None:intergenic
GGAGTAACTGTTCGTGCTAA+TGG 0.375764 7_2:+84656641 Msa1084340:CDS
AAGAAGCATGTGAGGGGCGG+AGG 0.375917 7_2:-84656216 None:intergenic
TGCTTCCTAGCTTAGTTTGT+GGG 0.376035 7_2:+84664496 Msa1084340:three_prime_UTR
CTCAATATTGCAGGAAGAAC+AGG 0.378174 7_2:+84664113 Msa1084340:intron
AACTGGACCAGCAGCTTTAA+GGG 0.379611 7_2:-84663295 None:intergenic
GAGAATTCATCAACATGGTT+TGG 0.380377 7_2:-84656280 None:intergenic
TACCTTATTTATCATGGTAT+AGG 0.382820 7_2:-84664455 None:intergenic
TGTAGGTTATGGTAGGTTGA+TGG 0.383764 7_2:-84655899 None:intergenic
CCTTCTAAGATTACCTGAAC+TGG 0.384145 7_2:-84663312 None:intergenic
CACAAGAATGTTGAGATTCA+TGG 0.386670 7_2:+84656578 Msa1084340:CDS
TAACCAGCATGTCTTGAATC+TGG 0.387032 7_2:-84664004 None:intergenic
CGCTGGAAGAGTCGACTGTT+TGG 0.391063 7_2:-84663868 None:intergenic
ATTTGGGCTCCGGTGGGAAA+AGG 0.392682 7_2:-84656156 None:intergenic
GGCGAGCCAGCATCAAGTTT+AGG 0.392871 7_2:+84663839 Msa1084340:CDS
GTTGGTGGTGGTGTTGGTGT+TGG 0.400036 7_2:-84655684 None:intergenic
TAAAGCTGCTGGTCCAGTTC+AGG 0.403368 7_2:+84663299 Msa1084340:CDS
TGGTGTTGGTGTTGGAGTTG+GGG 0.405042 7_2:-84655676 None:intergenic
TGTTCATCATTTCCTCGGAT+TGG 0.407349 7_2:-84663896 None:intergenic
CTGAAATTTGCTGAGAAAGT+TGG 0.415196 7_2:+84656365 Msa1084340:CDS
GCCATCTCAAATTCTCAATC+AGG 0.415987 7_2:-84664182 None:intergenic
GACACTAGTGCTGGTGGAAA+AGG 0.420179 7_2:+84663782 Msa1084340:CDS
CATGTCATTGCTGTTGCTGC+TGG 0.421863 7_2:+84660985 Msa1084340:CDS
CTTGATGCTGGCTCGCCAAC+TGG 0.422763 7_2:-84663833 None:intergenic
TGAATTCACCACAACCATCT+AGG 0.423468 7_2:-84655965 None:intergenic
ATTGATGTTGGTGGTGGTGT+TGG 0.426088 7_2:-84655690 None:intergenic
CGGTGGGAAAAGGGTGGTGG+TGG 0.426898 7_2:-84656146 None:intergenic
GAAAAGGGTGGTGGTGGAAG+TGG 0.427112 7_2:-84656140 None:intergenic
TTGTTCTGGTGATTTAGTTA+AGG 0.427703 7_2:-84655745 None:intergenic
TTCGCCCTCCGGTTTCATTA+CGG 0.428138 7_2:-84663206 None:intergenic
GATGGTTGTTGGTGGTGTTG+TGG 0.428385 7_2:-84655881 None:intergenic
CTCCGGTGGGAAAAGGGTGG+TGG 0.429757 7_2:-84656149 None:intergenic
GGTGGTTGAAGTGGTGGTGG+TGG 0.435301 7_2:-84655860 None:intergenic
GGAGGAGATCGGTGGTGGTG+AGG 0.437213 7_2:-84656183 None:intergenic
GGTGGGCCCCTTAAAGCTGC+TGG 0.437762 7_2:+84663288 Msa1084340:CDS
GGGTAGTAAGAGGAGGAGAT+CGG 0.438670 7_2:-84656194 None:intergenic
TCCTATGTCCGTAATGAAAC+CGG 0.439359 7_2:+84663198 Msa1084340:CDS
GTTGAGGTTGTTAATATGGT+TGG 0.439657 7_2:-84655717 None:intergenic
GGCGGAGGGGTAGTAAGAGG+AGG 0.440166 7_2:-84656201 None:intergenic
CAAGTTGTTGAATCATGTAA+TGG 0.441011 7_2:-84663937 None:intergenic
GTGGTGGTGAGGAGGAATTT+GGG 0.444504 7_2:-84656172 None:intergenic
CTAGGTGGTCATGCCCTAGA+TGG 0.446320 7_2:+84655951 Msa1084340:CDS
TATACCTACCTTATTTATCA+TGG 0.447415 7_2:-84664461 None:intergenic
GTCAGAAGCCACGACCTTAA+CGG 0.450596 7_2:-84664304 None:intergenic
TGGGGTGATGCAGGCAATGC+AGG 0.457106 7_2:+84660946 Msa1084340:intron
GGGCTCCGGTGGGAAAAGGG+TGG 0.457386 7_2:-84656152 None:intergenic
ATGCTTCCTAGCTTAGTTTG+TGG 0.457545 7_2:+84664495 Msa1084340:three_prime_UTR
GTTCACGGCGGTGGAAGTTA+CGG 0.458240 7_2:-84656052 None:intergenic
ATAGTATGCGCCATCCGTTA+AGG 0.460483 7_2:+84664290 Msa1084340:three_prime_UTR
AATTCTGATGGACAAATCAT+AGG 0.463502 7_2:+84663255 Msa1084340:CDS
TTTAAGGATGTTGGGTCGGT+TGG 0.464594 7_2:-84656008 None:intergenic
TGGTCATAGCCTCCATTCTC+GGG 0.466277 7_2:-84664155 None:intergenic
GGTTCGATGGCACCAATGTC+TGG 0.467018 7_2:+84664210 Msa1084340:three_prime_UTR
TGAAATTTGCTGAGAAAGTT+GGG 0.467964 7_2:+84656366 Msa1084340:CDS
GAGAATTTGAGATGGCTTGT+GGG 0.469001 7_2:+84664189 Msa1084340:exon
TCTCACCAGTCTCCCGAGAA+TGG 0.469905 7_2:+84664143 Msa1084340:CDS
AGCCTCCATTCTCGGGAGAC+TGG 0.470077 7_2:-84664148 None:intergenic
ATCATAGGTGGTGGTGTTGG+TGG 0.470575 7_2:+84663270 Msa1084340:CDS
TATGCATTCAATAGGATGTT+GGG 0.475179 7_2:+84662172 Msa1084340:intron
TTGGTCATAGCCTCCATTCT+CGG 0.475797 7_2:-84664156 None:intergenic
GGGTCGGTTGGTGTTGCTGT+GGG 0.476226 7_2:-84655996 None:intergenic
TGTGGTGGTTGAAGTGGTGG+TGG 0.482629 7_2:-84655863 None:intergenic
TGGTGTTGTGGTGGTTGAAG+TGG 0.484034 7_2:-84655869 None:intergenic
CATTACATGATTCAACAACT+TGG 0.485575 7_2:+84663938 Msa1084340:CDS
ATGGTTGGTGCTATTGATGT+TGG 0.487966 7_2:-84655702 None:intergenic
CTTGATGTTCATCATTTCCT+CGG 0.490079 7_2:-84663901 None:intergenic
GGAGATCGGTGGTGGTGAGG+AGG 0.490231 7_2:-84656180 None:intergenic
CACAATCATTATCAGAATGA+AGG 0.494541 7_2:+84656608 Msa1084340:CDS
TGTTGTGGTGGTTGAAGTGG+TGG 0.495077 7_2:-84655866 None:intergenic
AGAAGCATGTGAGGGGCGGA+GGG 0.495592 7_2:-84656215 None:intergenic
CTCCTGAAGATGCTGGTTGA+CGG 0.496465 7_2:-84662278 None:intergenic
GTGGTGGTTCTTCAGGTTCA+CGG 0.497308 7_2:-84656067 None:intergenic
ATATGCATTATGTCTGCATC+TGG 0.497917 7_2:+84662234 Msa1084340:CDS
TAAGAGGAGGAGATCGGTGG+TGG 0.498462 7_2:-84656188 None:intergenic
GCTGGCTCGCCAACTGGTGA+TGG 0.498545 7_2:-84663827 None:intergenic
AAGACCACCACTTCGCCCTC+CGG 0.498681 7_2:-84663217 None:intergenic
ACCTCCCAGGTCTACAGAGT+GGG 0.499164 7_2:+84663973 Msa1084340:CDS
TGGGGTTAAGGTTATGTCCA+TGG 0.499789 7_2:-84655658 None:intergenic
GTGAGGAGGAATTTGGGCTC+CGG 0.500275 7_2:-84656166 None:intergenic
GTGGTGGAAGTGGTTGATGA+CGG 0.500583 7_2:-84656130 None:intergenic
AAATGATGAACATCAAGCTA+TGG 0.500826 7_2:+84663907 Msa1084340:CDS
TTTAGTTAAGGTTGTTGTTG+AGG 0.502769 7_2:-84655733 None:intergenic
AGGAGGAATTTGGGCTCCGG+TGG 0.505710 7_2:-84656163 None:intergenic
TTTGGGCTCCGGTGGGAAAA+GGG 0.507171 7_2:-84656155 None:intergenic
TGCGCCATCCGTTAAGGTCG+TGG 0.515945 7_2:+84664296 Msa1084340:three_prime_UTR
GGTAGGTTGATGGTTGTTGG+TGG 0.516018 7_2:-84655889 None:intergenic
AGGAGGCAACATTATGTATG+AGG 0.516281 7_2:+84662296 Msa1084340:CDS
CATTCTTTGTAGGTTATGGT+AGG 0.517382 7_2:-84655906 None:intergenic
AAATACATCACAAGTAAATG+AGG 0.517819 7_2:-84664373 None:intergenic
GGTGCTATTGATGTTGGTGG+TGG 0.518237 7_2:-84655696 None:intergenic
TATAGCCCACAAACTAAGCT+AGG 0.521819 7_2:-84664501 None:intergenic
GTTGGTGCTATTGATGTTGG+TGG 0.524202 7_2:-84655699 None:intergenic
AACAATGAGAATATTAATGA+TGG 0.527160 7_2:+84656518 Msa1084340:CDS
GACCACCTAGGTTTGCTGCA+TGG 0.528612 7_2:-84655938 None:intergenic
GGTTGTTGGTGGTGTTGTGG+TGG 0.530020 7_2:-84655878 None:intergenic
GTTTGCACGTGACACCTCCC+AGG 0.535717 7_2:+84663960 Msa1084340:CDS
TCCGGTTTCATTACGGACAT+AGG 0.536430 7_2:-84663199 None:intergenic
GTATGCATTCAATAGGATGT+TGG 0.536594 7_2:+84662171 Msa1084340:intron
GAATTCACCACAACCATCTA+GGG 0.539304 7_2:-84655964 None:intergenic
CACTGGACTTCATACCTGAC+AGG 0.545872 7_2:-84664030 None:intergenic
TCATAGGTGGTGGTGTTGGT+GGG 0.546536 7_2:+84663271 Msa1084340:CDS
CATCCAGATTCAAGACATGC+TGG 0.548607 7_2:+84664001 Msa1084340:CDS
ACATGAGTTGTGGTGGAAAG+TGG 0.548946 7_2:-84656086 None:intergenic
GAGAGAGCAAGAAGCATGTG+AGG 0.550052 7_2:-84656224 None:intergenic
CAAATCATAGGTGGTGGTGT+TGG 0.550092 7_2:+84663267 Msa1084340:CDS
ATGGAGCAAGCACCTTGAAA+CGG 0.550654 7_2:-84664532 None:intergenic
GAAGCATGTGAGGGGCGGAG+GGG 0.553313 7_2:-84656214 None:intergenic
CATGCTGGTTATGACCTGTC+AGG 0.555450 7_2:+84664016 Msa1084340:CDS
CATTGCTGTTGCTGCTGGTG+AGG 0.555993 7_2:+84660990 Msa1084340:CDS
AGCAAGCACCTTGAAACGGA+AGG 0.556073 7_2:-84664528 None:intergenic
TGGGTCGGTTGGTGTTGCTG+TGG 0.558596 7_2:-84655997 None:intergenic
GTATGCTTGTCTAATTCTGA+TGG 0.561947 7_2:+84663243 Msa1084340:CDS
TGAGAATTTGAGATGGCTTG+TGG 0.563343 7_2:+84664188 Msa1084340:exon
TCCTCGGATTGGATTCCCGC+TGG 0.565035 7_2:-84663885 None:intergenic
TCCTTAAAATGTGCTGCTTG+TGG 0.574232 7_2:+84656023 Msa1084340:CDS
GGTCATGCCCTAGATGGTTG+TGG 0.575703 7_2:+84655957 Msa1084340:CDS
ATTGCAGGAAGAACAGGTCA+TGG 0.575958 7_2:+84664119 Msa1084340:intron
TAGTAAGAGGAGGAGATCGG+TGG 0.577001 7_2:-84656191 None:intergenic
ACGGAGAGAGGCATTAGAGA+TGG 0.577094 7_2:-84662259 None:intergenic
CACCTCGTGACAAAGACTGC+TGG 0.581481 7_2:-84664261 None:intergenic
AATGATGAACATCAAGCTAT+GGG 0.582749 7_2:+84663908 Msa1084340:CDS
GGAAAAGGTGATCCCTCTGC+TGG 0.584167 7_2:+84663797 Msa1084340:CDS
TTGTGTTCTTCATCTTCAAG+AGG 0.585430 7_2:-84656560 None:intergenic
TTCAATGACATGAGTTGTGG+TGG 0.585624 7_2:-84656093 None:intergenic
TCCTGATTGAGAATTTGAGA+TGG 0.587653 7_2:+84664181 Msa1084340:exon
AACAAGAAGGACACTAGTGC+TGG 0.587899 7_2:+84663773 Msa1084340:CDS
TGGAAGAGTCGACTGTTTGG+TGG 0.588873 7_2:-84663865 None:intergenic
GAGATGGCTTGTGGGTTCGA+TGG 0.589349 7_2:+84664197 Msa1084340:three_prime_UTR
TAATCCCTACAGGTCATTGT+CGG 0.592613 7_2:+84663734 Msa1084340:intron
AGCAAGAAGCATGTGAGGGG+CGG 0.594492 7_2:-84656219 None:intergenic
AGAGAGCAAGAAGCATGTGA+GGG 0.597359 7_2:-84656223 None:intergenic
AATCATTATCAGAATGAAGG+TGG 0.598316 7_2:+84656611 Msa1084340:CDS
GTGGAAGTGGTTGATGACGG+TGG 0.599219 7_2:-84656127 None:intergenic
GAGAGCAAGAAGCATGTGAG+GGG 0.602424 7_2:-84656222 None:intergenic
TGGAAACCTAAACTTGATGC+TGG 0.602657 7_2:-84663845 None:intergenic
GAAACCGGAGGGCGAAGTGG+TGG 0.603275 7_2:+84663213 Msa1084340:CDS
CAATTTATGCAACAAAATAG+GGG 0.604932 7_2:+84662207 Msa1084340:CDS
AAGAAGGACACTAGTGCTGG+TGG 0.607696 7_2:+84663776 Msa1084340:CDS
AGATGCTGGTTGACGGAGAG+AGG 0.610130 7_2:-84662271 None:intergenic
GATGCAGGCAATGCAGGACA+AGG 0.611195 7_2:+84660952 Msa1084340:intron
TACAACTGTTAACCAGACAT+TGG 0.620305 7_2:-84664222 None:intergenic
TTGCAGGAAGAACAGGTCAT+GGG 0.620825 7_2:+84664120 Msa1084340:intron
CAAAGACTGCTGGTATGTAG+TGG 0.621373 7_2:-84664251 None:intergenic
AATGAAACCGGAGGGCGAAG+TGG 0.622641 7_2:+84663210 Msa1084340:CDS
ATATTCAATGACATGAGTTG+TGG 0.623812 7_2:-84656096 None:intergenic
AAACAGTCGACTCTTCCAGC+GGG 0.624900 7_2:+84663870 Msa1084340:CDS
AGTGGTTGATGACGGTGGTG+AGG 0.625162 7_2:-84656122 None:intergenic
GATGAACATCAAGCTATGGG+TGG 0.627293 7_2:+84663911 Msa1084340:CDS
GGAGGAATTTGGGCTCCGGT+GGG 0.630361 7_2:-84656162 None:intergenic
CACCTCCCAGGTCTACAGAG+TGG 0.633953 7_2:+84663972 Msa1084340:CDS
AGAGTGAGAATTCATCAACA+TGG 0.636406 7_2:-84656285 None:intergenic
GCAAGCACCTTGAAACGGAA+GGG 0.638256 7_2:-84664527 None:intergenic
ATGTTGCCTCCTGAAGATGC+TGG 0.639283 7_2:-84662285 None:intergenic
TGATGGCAACTTACCAGCAG+AGG 0.643200 7_2:-84663810 None:intergenic
GGTAAGTTGCCATCACCAGT+TGG 0.643376 7_2:+84663818 Msa1084340:CDS
ACTGGACCAGCAGCTTTAAG+GGG 0.646372 7_2:-84663294 None:intergenic
GATGGCAACTTACCAGCAGA+GGG 0.646608 7_2:-84663809 None:intergenic
TATACCATGATAAATAAGGT+AGG 0.647891 7_2:+84664457 Msa1084340:three_prime_UTR
CACCAGTCTCCCGAGAATGG+AGG 0.648200 7_2:+84664146 Msa1084340:CDS
CATCTAGGGCATGACCACCT+AGG 0.648371 7_2:-84655950 None:intergenic
CCTCCCAGGTCTACAGAGTG+GGG 0.652955 7_2:+84663974 Msa1084340:CDS
GAAGCCACGACCTTAACGGA+TGG 0.655831 7_2:-84664300 None:intergenic
TGAGTTGTGGTGGAAAGTGG+TGG 0.661282 7_2:-84656083 None:intergenic
TCTGATGGACAAATCATAGG+TGG 0.664275 7_2:+84663258 Msa1084340:CDS
CACGGCGGTGGAAGTTACGG+TGG 0.670619 7_2:-84656049 None:intergenic
TCCAGCGGGAATCCAATCCG+AGG 0.670950 7_2:+84663884 Msa1084340:CDS
GATGGACAAATCATAGGTGG+TGG 0.676431 7_2:+84663261 Msa1084340:CDS
ATGTCCGTAATGAAACCGGA+GGG 0.676572 7_2:+84663202 Msa1084340:CDS
CGTCAACCAGCATCTTCAGG+AGG 0.676685 7_2:+84662279 Msa1084340:CDS
TATGTCCGTAATGAAACCGG+AGG 0.677990 7_2:+84663201 Msa1084340:CDS
CTCCCAGGTCTACAGAGTGG+GGG 0.684142 7_2:+84663975 Msa1084340:CDS
AACCATGCAGCAAACCTAGG+TGG 0.685477 7_2:+84655936 Msa1084340:CDS
CAAACAGTCGACTCTTCCAG+CGG 0.690163 7_2:+84663869 Msa1084340:CDS
TACCAGCAGTCTTTGTCACG+AGG 0.704449 7_2:+84664259 Msa1084340:three_prime_UTR
CCCCACTCTGTAGACCTGGG+AGG 0.709027 7_2:-84663974 None:intergenic
AATTTGCTGAGAAAGTTGGG+TGG 0.726025 7_2:+84656369 Msa1084340:CDS
GTGGTTCTTCAGGTTCACGG+CGG 0.747111 7_2:-84656064 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGTTTATTAATTAATTAAAA+TGG + chr7_2:84656951-84656970 Msa1084340:intron 10.0%
!!! TTTTAATTAATTAAAGTTGA+TGG + chr7_2:84656980-84656999 Msa1084340:intron 10.0%
!!! TTTTATTTTGTTTTGTTTTA+TGG + chr7_2:84657362-84657381 Msa1084340:intron 10.0%
!!! TTTATTCTATTTAATTTCTT+TGG + chr7_2:84657408-84657427 Msa1084340:intron 10.0%
!! AATAAAATTATTGTGTATAT+AGG + chr7_2:84657876-84657895 Msa1084340:intron 10.0%
!! AAAGTATAAATGAAATTTAA+TGG - chr7_2:84658300-84658319 None:intergenic 10.0%
!!! ATGAATTTTTATATGTTTTA+AGG - chr7_2:84658591-84658610 None:intergenic 10.0%
!!! AAAAATTCTGAATTTTTTTT+TGG + chr7_2:84658631-84658650 Msa1084340:intron 10.0%
!! TTATTATTTATTATAAAAGG+AGG + chr7_2:84661341-84661360 Msa1084340:intron 10.0%
!! AAATTCAAAGTAATATAAAT+AGG - chr7_2:84662489-84662508 None:intergenic 10.0%
!! AAGAGAAAAATAAAAAAATA+TGG - chr7_2:84662730-84662749 None:intergenic 10.0%
!! TGTTATAAATATAGATATTT+CGG + chr7_2:84663609-84663628 Msa1084340:intron 10.0%
!! TCTTCTTAATCTTTAATTAA+TGG + chr7_2:84656674-84656693 Msa1084340:intron 15.0%
!!! TCTTTTTTTGTGTTTTTATA+TGG + chr7_2:84656889-84656908 Msa1084340:intron 15.0%
!!! TTTTTATCAAATTTCATTCT+TGG - chr7_2:84657459-84657478 None:intergenic 15.0%
!! TAATTGTTAAGTAAACTTAA+TGG + chr7_2:84658152-84658171 Msa1084340:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr7_2:84658434-84658453 None:intergenic 15.0%
!!! AAATTTTCAATCTTCAATTT+TGG - chr7_2:84658743-84658762 None:intergenic 15.0%
!!! TTGAAGATTGAAAATTTTAT+AGG + chr7_2:84658746-84658765 Msa1084340:intron 15.0%
!!! TGAAGATTGAAAATTTTATA+GGG + chr7_2:84658747-84658766 Msa1084340:intron 15.0%
!!! TAAAAATAGTTTAGAATCTA+GGG - chr7_2:84658850-84658869 None:intergenic 15.0%
!!! TTAAAAATAGTTTAGAATCT+AGG - chr7_2:84658851-84658870 None:intergenic 15.0%
!!! AAATTTAAAATATGAGAAAG+AGG - chr7_2:84659551-84659570 None:intergenic 15.0%
!!! TGATTAATTATTTTGTGAAT+TGG + chr7_2:84660100-84660119 Msa1084340:intron 15.0%
!!! GCTTAATTTTATTTAGTTTA+TGG + chr7_2:84660914-84660933 Msa1084340:intron 15.0%
!!! TTTTATTTAGTTTATGGTTA+TGG + chr7_2:84660920-84660939 Msa1084340:intron 15.0%
!!! TTTTAACAAACTTAAACAAA+CGG + chr7_2:84661500-84661519 Msa1084340:intron 15.0%
!! AAAAATAAAAAAATATGGAC+GGG - chr7_2:84662725-84662744 None:intergenic 15.0%
!! GAAAAATAAAAAAATATGGA+CGG - chr7_2:84662726-84662745 None:intergenic 15.0%
!!! GTTGATCTTTTTAATTTTTT+AGG + chr7_2:84663078-84663097 Msa1084340:intron 15.0%
!! ATTTATCAAAAATAACTTCT+TGG - chr7_2:84663711-84663730 None:intergenic 15.0%
!! GATGTATTTAAAAATTAGAA+TGG + chr7_2:84664387-84664406 Msa1084340:three_prime_UTR 15.0%
!!! TAATATTCTCATTGTTGTTA+AGG - chr7_2:84656514-84656533 None:intergenic 20.0%
!! AACAATGAGAATATTAATGA+TGG + chr7_2:84656518-84656537 Msa1084340:CDS 20.0%
!! ATTTAAGTACTTATGTTACT+TGG + chr7_2:84656719-84656738 Msa1084340:intron 20.0%
!! GATATTATGAATTATGAATG+AGG + chr7_2:84656801-84656820 Msa1084340:intron 20.0%
!! TGAAATATGAATAGTAAACT+TGG + chr7_2:84657143-84657162 Msa1084340:intron 20.0%
!!! ATTTTGTTTTGTTTTATGGA+AGG + chr7_2:84657366-84657385 Msa1084340:intron 20.0%
!! AAATTTCATTCTTGGATTTA+TGG - chr7_2:84657451-84657470 None:intergenic 20.0%
!!! TACAATAGTTTATTAGTTTG+TGG + chr7_2:84657618-84657637 Msa1084340:intron 20.0%
!!! ACAATAGTTTATTAGTTTGT+GGG + chr7_2:84657619-84657638 Msa1084340:intron 20.0%
!!! CAAAAAATTAGTCTTAAGAT+TGG - chr7_2:84657730-84657749 None:intergenic 20.0%
!! ATATAATACTAAAGCAACTA+AGG - chr7_2:84657770-84657789 None:intergenic 20.0%
!!! CTTAGTATTTTGTCTATAAA+AGG - chr7_2:84658041-84658060 None:intergenic 20.0%
!! CTTATGTTTGTATAATTACT+TGG - chr7_2:84658095-84658114 None:intergenic 20.0%
!! AATATGATAGATAGATTCTA+GGG + chr7_2:84658331-84658350 Msa1084340:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG - chr7_2:84658374-84658393 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr7_2:84658435-84658454 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr7_2:84658715-84658734 Msa1084340:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr7_2:84658716-84658735 Msa1084340:intron 20.0%
!! GAAAAGTAGACATATTTATA+GGG + chr7_2:84658807-84658826 Msa1084340:intron 20.0%
!! ACAATAAGATTATTCAACAA+TGG + chr7_2:84659151-84659170 Msa1084340:intron 20.0%
!!! AAATATCAAGCTATTTCAAT+AGG + chr7_2:84659346-84659365 Msa1084340:intron 20.0%
!! AATAAATAACAACATGTGTA+TGG + chr7_2:84659578-84659597 Msa1084340:intron 20.0%
!!! TTTTCAACTTCTTTTTACAA+TGG + chr7_2:84659889-84659908 Msa1084340:intron 20.0%
!!! TATTTTTTCTTCGAAAATCT+CGG + chr7_2:84660249-84660268 Msa1084340:intron 20.0%
!! TATGTCTCAATTTGTAATAT+AGG + chr7_2:84660355-84660374 Msa1084340:intron 20.0%
!!! TTATACTTTTTTCGAATTGT+GGG + chr7_2:84660402-84660421 Msa1084340:intron 20.0%
!! ACTTAATCAAAAGTAATCAA+AGG - chr7_2:84660572-84660591 None:intergenic 20.0%
!!! AAATCACTAAAAATGGATTT+CGG - chr7_2:84660762-84660781 None:intergenic 20.0%
!! TTGAAACAAATCACTAAAAA+TGG - chr7_2:84660769-84660788 None:intergenic 20.0%
!! TTTAACAAACTTAAACAAAC+GGG + chr7_2:84661501-84661520 Msa1084340:intron 20.0%
!! TTGGAGAAATAATCAATTAT+TGG + chr7_2:84661593-84661612 Msa1084340:intron 20.0%
!!! TTTTTAAGATGCTAATTTCT+TGG + chr7_2:84661766-84661785 Msa1084340:intron 20.0%
!! TAAAATGTAAAGATAAACCT+TGG - chr7_2:84662585-84662604 None:intergenic 20.0%
!! AAAATAAAAAAATATGGACG+GGG - chr7_2:84662724-84662743 None:intergenic 20.0%
!!! TAACCAAAAAAAACTTTTTG+TGG + chr7_2:84662839-84662858 Msa1084340:intron 20.0%
!! GAAATATTCTTATAAGAAGT+GGG - chr7_2:84662911-84662930 None:intergenic 20.0%
!! AGAAATATTCTTATAAGAAG+TGG - chr7_2:84662912-84662931 None:intergenic 20.0%
!! AAATTGTGTCTATATTAGAT+TGG + chr7_2:84662967-84662986 Msa1084340:intron 20.0%
!!! AATTTTTTAGGTGTATGATT+TGG + chr7_2:84663090-84663109 Msa1084340:intron 20.0%
!! TATTTAAAAATTAGAATGGC+TGG + chr7_2:84664391-84664410 Msa1084340:three_prime_UTR 20.0%
!! TTTGAAAAAGGTGAGATTTT+TGG - chr7_2:84655816-84655835 None:intergenic 25.0%
!!! AAAATCTCACCTTTTTCAAA+TGG + chr7_2:84655816-84655835 Msa1084340:CDS 25.0%
! CATATCCAAAATGTTAACAA+AGG - chr7_2:84656838-84656857 None:intergenic 25.0%
!!! TAATTAAAGTTGATGGTACT+AGG + chr7_2:84656987-84657006 Msa1084340:intron 25.0%
!!! TTCTGAAATTTTTCTGATGT+TGG + chr7_2:84657037-84657056 Msa1084340:intron 25.0%
! ATACACTATTCCATTTCTTA+CGG - chr7_2:84657256-84657275 None:intergenic 25.0%
! TATACTACCATAGTCTATAA+CGG + chr7_2:84657501-84657520 Msa1084340:intron 25.0%
! TGTCTAAATCATACTCTAAT+TGG - chr7_2:84657565-84657584 None:intergenic 25.0%
! TCCAAAAGAAACTTTGATTA+TGG + chr7_2:84657662-84657681 Msa1084340:intron 25.0%
!! ACCATAATCAAAGTTTCTTT+TGG - chr7_2:84657666-84657685 None:intergenic 25.0%
! TATTCTTGAAGAATAATCTG+TGG + chr7_2:84657787-84657806 Msa1084340:intron 25.0%
! ATTCTTGAAGAATAATCTGT+GGG + chr7_2:84657788-84657807 Msa1084340:intron 25.0%
! AGGATATTTACTAAAATCAG+TGG + chr7_2:84657896-84657915 Msa1084340:intron 25.0%
! GGATATTTACTAAAATCAGT+GGG + chr7_2:84657897-84657916 Msa1084340:intron 25.0%
! TAAAATTTGATATGTCACAG+TGG + chr7_2:84658004-84658023 Msa1084340:intron 25.0%
!!! AAGATTTTAGAAGTATGATG+TGG - chr7_2:84658250-84658269 None:intergenic 25.0%
! GAATATGATAGATAGATTCT+AGG + chr7_2:84658330-84658349 Msa1084340:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG - chr7_2:84658375-84658394 None:intergenic 25.0%
!! AGTTGAAGGTAAATTTTAGA+GGG - chr7_2:84658405-84658424 None:intergenic 25.0%
!! AAGTTGAAGGTAAATTTTAG+AGG - chr7_2:84658406-84658425 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr7_2:84658775-84658794 Msa1084340:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr7_2:84658776-84658795 Msa1084340:intron 25.0%
! CGAAAAGTAGACATATTTAT+AGG + chr7_2:84658806-84658825 Msa1084340:intron 25.0%
!!! TCTAGGGTTAAATATGTTTT+TGG - chr7_2:84658347-84658366 None:intergenic 25.0%
!!! TATTTTTAATTTCTAGCCCA+AGG + chr7_2:84658862-84658881 Msa1084340:intron 25.0%
!!! ATTTTTAATTTCTAGCCCAA+GGG + chr7_2:84658863-84658882 Msa1084340:intron 25.0%
! AGAATCTCTAATCATAGATA+AGG + chr7_2:84659251-84659270 Msa1084340:intron 25.0%
!! TTTAAAATATGAGAAAGAGG+AGG - chr7_2:84659548-84659567 None:intergenic 25.0%
! TTAATTGCCCCTTAAAAATT+GGG + chr7_2:84659748-84659767 Msa1084340:intron 25.0%
! AAAATTGACAAAAATTCCTG+AGG - chr7_2:84659797-84659816 None:intergenic 25.0%
! CTATTAATCATCTTTCTCTA+AGG + chr7_2:84660151-84660170 Msa1084340:intron 25.0%
! AACAATTTAGAAGATTTGAG+AGG + chr7_2:84660214-84660233 Msa1084340:intron 25.0%
!!! ATTTTTTCTTCGAAAATCTC+GGG + chr7_2:84660250-84660269 Msa1084340:intron 25.0%
! TACAAATTGAGACATAAAAG+AGG - chr7_2:84660351-84660370 None:intergenic 25.0%
!! AAAAAAGTATAAGAGGAACT+CGG - chr7_2:84660394-84660413 None:intergenic 25.0%
!! CAATTCGAAAAAAGTATAAG+AGG - chr7_2:84660401-84660420 None:intergenic 25.0%
!!! CTTATACTTTTTTCGAATTG+TGG + chr7_2:84660401-84660420 Msa1084340:intron 25.0%
!! TTAAAAAGTTAGCTTCACAT+TGG - chr7_2:84660523-84660542 None:intergenic 25.0%
! TTAGTTTATGGTTATGGTAA+TGG + chr7_2:84660926-84660945 Msa1084340:intron 25.0%
! TAGTTTATGGTTATGGTAAT+GGG + chr7_2:84660927-84660946 Msa1084340:intron 25.0%
! ATTGCTCAAGTTAATGTATT+TGG + chr7_2:84661128-84661147 Msa1084340:intron 25.0%
! TTGCTCAAGTTAATGTATTT+GGG + chr7_2:84661129-84661148 Msa1084340:intron 25.0%
!! AAGTTAATGTATTTGGGTTT+GGG + chr7_2:84661135-84661154 Msa1084340:intron 25.0%
!!! AAAGCTATTTTGATTAGCTT+TGG - chr7_2:84661395-84661414 None:intergenic 25.0%
! ATTTCTCCAAATCTAATCAA+GGG - chr7_2:84661583-84661602 None:intergenic 25.0%
! TATTTCTCCAAATCTAATCA+AGG - chr7_2:84661584-84661603 None:intergenic 25.0%
!! AGACAATAGCATTTTTCATA+TGG + chr7_2:84661734-84661753 Msa1084340:intron 25.0%
!! ATCCAAGAATAATGCTTTTA+GGG + chr7_2:84661845-84661864 Msa1084340:intron 25.0%
! TTTAAGCAAAATATGCTTGT+AGG + chr7_2:84661962-84661981 Msa1084340:intron 25.0%
! ATTAAGATCCTAAAACATCT+TGG - chr7_2:84662032-84662051 None:intergenic 25.0%
! TGAAAACCAAATTGGATAAA+TGG - chr7_2:84662115-84662134 None:intergenic 25.0%
! GAAAAAGATGAAAACCAAAT+TGG - chr7_2:84662123-84662142 None:intergenic 25.0%
! TATTTGAGTATGCATTCAAT+AGG + chr7_2:84662164-84662183 Msa1084340:intron 25.0%
! TGCAATTTATGCAACAAAAT+AGG + chr7_2:84662205-84662224 Msa1084340:CDS 25.0%
! GCAATTTATGCAACAAAATA+GGG + chr7_2:84662206-84662225 Msa1084340:CDS 25.0%
! CAATTTATGCAACAAAATAG+GGG + chr7_2:84662207-84662226 Msa1084340:CDS 25.0%
!! TTATCTTTACATTTTACCCA+TGG + chr7_2:84662589-84662608 Msa1084340:intron 25.0%
!!! TGACCACAAAAAGTTTTTTT+TGG - chr7_2:84662845-84662864 None:intergenic 25.0%
! TTAATAAAAACACTGTACTG+CGG + chr7_2:84663046-84663065 Msa1084340:intron 25.0%
! TTCTTTAATGCTTTGATATC+AGG + chr7_2:84663146-84663165 Msa1084340:intron 25.0%
! TCTTTAATGCTTTGATATCA+GGG + chr7_2:84663147-84663166 Msa1084340:intron 25.0%
! TGTGAATGTAATTCATTATC+AGG - chr7_2:84663688-84663707 None:intergenic 25.0%
!!! ATTTTTTATGGACAACAAGA+AGG + chr7_2:84663760-84663779 Msa1084340:CDS 25.0%
! TTATACCATAAGAAAATCAG+TGG - chr7_2:84664074-84664093 None:intergenic 25.0%
!! AGGCAAAACAATATTTTTCA+AGG - chr7_2:84664356-84664375 None:intergenic 25.0%
! AAATACATCACAAGTAAATG+AGG - chr7_2:84664376-84664395 None:intergenic 25.0%
! TACCTATACCATGATAAATA+AGG + chr7_2:84664453-84664472 Msa1084340:three_prime_UTR 25.0%
!! TACCTTATTTATCATGGTAT+AGG - chr7_2:84664458-84664477 None:intergenic 25.0%
! TATACCATGATAAATAAGGT+AGG + chr7_2:84664457-84664476 Msa1084340:three_prime_UTR 25.0%
!! TATACCTACCTTATTTATCA+TGG - chr7_2:84664464-84664483 None:intergenic 25.0%
TGTTGTTGAGGTTGTTAATA+TGG - chr7_2:84655724-84655743 None:intergenic 30.0%
! TTTAGTTAAGGTTGTTGTTG+AGG - chr7_2:84655736-84655755 None:intergenic 30.0%
TTGTTCTGGTGATTTAGTTA+AGG - chr7_2:84655748-84655767 None:intergenic 30.0%
TTGAGAACACCATTTGAAAA+AGG - chr7_2:84655828-84655847 None:intergenic 30.0%
!!! GTTTTTGAGACATTCTTTGT+AGG - chr7_2:84655919-84655938 None:intergenic 30.0%
ATATTCAATGACATGAGTTG+TGG - chr7_2:84656099-84656118 None:intergenic 30.0%
!! TGAAATTTGCTGAGAAAGTT+GGG + chr7_2:84656366-84656385 Msa1084340:CDS 30.0%
!! CATGAGTTTTGTAATGAGAT+TGG + chr7_2:84656422-84656441 Msa1084340:CDS 30.0%
CACAATCATTATCAGAATGA+AGG + chr7_2:84656608-84656627 Msa1084340:CDS 30.0%
AATCATTATCAGAATGAAGG+TGG + chr7_2:84656611-84656630 Msa1084340:CDS 30.0%
! GATCACCTTTGTTAACATTT+TGG + chr7_2:84656830-84656849 Msa1084340:intron 30.0%
! AATTTTTCTCCCGTAAGAAA+TGG + chr7_2:84657243-84657262 Msa1084340:intron 30.0%
TACACTATTCCATTTCTTAC+GGG - chr7_2:84657255-84657274 None:intergenic 30.0%
!!! TTGTTTTGTTTTATGGAAGG+TGG + chr7_2:84657369-84657388 Msa1084340:intron 30.0%
ATACTACCATAGTCTATAAC+GGG + chr7_2:84657502-84657521 Msa1084340:intron 30.0%
AGCAACTAAGGAAGTTATAT+TGG - chr7_2:84657758-84657777 None:intergenic 30.0%
TCTACTTTCATTCCATGATA+AGG - chr7_2:84657820-84657839 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr7_2:84658762-84658781 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr7_2:84658762-84658781 Msa1084340:intron 30.0%
!! GTTGAAGGAAAATTTTAGAG+GGG + chr7_2:84658777-84658796 Msa1084340:intron 30.0%
!!! TTTTTAATTTCTAGCCCAAG+GGG + chr7_2:84658864-84658883 Msa1084340:intron 30.0%
AAATAACAACATGTGTATGG+TGG + chr7_2:84659581-84659600 Msa1084340:intron 30.0%
AATAACAACATGTGTATGGT+GGG + chr7_2:84659582-84659601 Msa1084340:intron 30.0%
!! TGAAGTCAGTAATCTTGTTT+TGG + chr7_2:84659645-84659664 Msa1084340:intron 30.0%
CTTAATTGCCCCTTAAAAAT+TGG + chr7_2:84659747-84659766 Msa1084340:intron 30.0%
TAATTGCCCCTTAAAAATTG+GGG + chr7_2:84659749-84659768 Msa1084340:intron 30.0%
AGAAACTGATTATCAAACAG+TGG - chr7_2:84659844-84659863 None:intergenic 30.0%
AAGAAGTTGAAAAATCCATG+TGG - chr7_2:84659882-84659901 None:intergenic 30.0%
! TGTTTTGTAGTCTTCAACTA+AGG + chr7_2:84660026-84660045 Msa1084340:intron 30.0%
!!! TTTTTTCTTCGAAAATCTCG+GGG + chr7_2:84660251-84660270 Msa1084340:intron 30.0%
!! TGGCTTCTATGTATTTTGAA+TGG + chr7_2:84660316-84660335 Msa1084340:intron 30.0%
AATTTGTAATATAGGCCGTT+TGG + chr7_2:84660363-84660382 Msa1084340:intron 30.0%
ATTTGTAATATAGGCCGTTT+GGG + chr7_2:84660364-84660383 Msa1084340:intron 30.0%
! CTATATGTGTGTTGTTAGAA+AGG + chr7_2:84660699-84660718 Msa1084340:intron 30.0%
! AGTTTATGGTTATGGTAATG+GGG + chr7_2:84660928-84660947 Msa1084340:intron 30.0%
! CAAGTTAATGTATTTGGGTT+TGG + chr7_2:84661134-84661153 Msa1084340:intron 30.0%
TTTCTTCCCTTGATTAGATT+TGG + chr7_2:84661574-84661593 Msa1084340:intron 30.0%
GGATATACGTAGTAAATAAG+AGG - chr7_2:84661621-84661640 None:intergenic 30.0%
!! CCATCAACTTATTTTCACTA+AGG - chr7_2:84661802-84661821 None:intergenic 30.0%
! CCTTAGTGAAAATAAGTTGA+TGG + chr7_2:84661799-84661818 Msa1084340:intron 30.0%
! GATCCAAGAATAATGCTTTT+AGG + chr7_2:84661844-84661863 Msa1084340:intron 30.0%
! TCCAAGAATAATGCTTTTAG+GGG + chr7_2:84661846-84661865 Msa1084340:intron 30.0%
!!! TTTTTGAGTGATGCTGTTAT+AGG - chr7_2:84661908-84661927 None:intergenic 30.0%
! TGTTTGCCATTTATCCAATT+TGG + chr7_2:84662106-84662125 Msa1084340:intron 30.0%
TATGCATTCAATAGGATGTT+GGG + chr7_2:84662172-84662191 Msa1084340:intron 30.0%
GAGAGATTGTTTGAAGAATA+GGG - chr7_2:84662388-84662407 None:intergenic 30.0%
TGAGAGATTGTTTGAAGAAT+AGG - chr7_2:84662389-84662408 None:intergenic 30.0%
TCTTCAAACAATCTCTCAAA+AGG + chr7_2:84662391-84662410 Msa1084340:intron 30.0%
AACAATCTCTCAAAAGGAAA+CGG + chr7_2:84662397-84662416 Msa1084340:intron 30.0%
ATAAATAGGAATATGAGCCT+TGG - chr7_2:84662475-84662494 None:intergenic 30.0%
TACTTGTGTTAAAGAAACCA+AGG + chr7_2:84662565-84662584 Msa1084340:intron 30.0%
TAGCATATTCAATCAACATG+TGG - chr7_2:84662640-84662659 None:intergenic 30.0%
! AAACTTTTTGTGGTCAAATC+TGG + chr7_2:84662849-84662868 Msa1084340:intron 30.0%
! AGAATATTTCTACCTTCAAG+AGG + chr7_2:84662921-84662940 Msa1084340:intron 30.0%
TTTGATATCATTTCGCTTAC+TGG + chr7_2:84663174-84663193 Msa1084340:CDS 30.0%
! AATTCTGATGGACAAATCAT+AGG + chr7_2:84663255-84663274 Msa1084340:CDS 30.0%
TTTACCTTGTGAATATTGAG+CGG + chr7_2:84663387-84663406 Msa1084340:intron 30.0%
ACAGAAACTACAAAAGAAAC+AGG - chr7_2:84663430-84663449 None:intergenic 30.0%
! TTTCTGTTATAGCCTTTTTC+TGG + chr7_2:84663443-84663462 Msa1084340:intron 30.0%
!!! TTTTTTGTTCTGCCAGAAAA+AGG - chr7_2:84663458-84663477 None:intergenic 30.0%
AAATCAACTTCTGCCAAAAA+AGG + chr7_2:84663499-84663518 Msa1084340:intron 30.0%
AATCAACTTCTGCCAAAAAA+GGG + chr7_2:84663500-84663519 Msa1084340:intron 30.0%
TAACTATGTAGTGAAATCAG+TGG + chr7_2:84663553-84663572 Msa1084340:intron 30.0%
GAATGTAATTCATTATCAGG+TGG - chr7_2:84663685-84663704 None:intergenic 30.0%
GATAAATAGTTAATCCCTAC+AGG + chr7_2:84663724-84663743 Msa1084340:intron 30.0%
!!! CATTGTCGGTACATTTTTTA+TGG + chr7_2:84663748-84663767 Msa1084340:CDS 30.0%
AAATGATGAACATCAAGCTA+TGG + chr7_2:84663907-84663926 Msa1084340:CDS 30.0%
AATGATGAACATCAAGCTAT+GGG + chr7_2:84663908-84663927 Msa1084340:CDS 30.0%
CAAGTTGTTGAATCATGTAA+TGG - chr7_2:84663940-84663959 None:intergenic 30.0%
CATTACATGATTCAACAACT+TGG + chr7_2:84663938-84663957 Msa1084340:CDS 30.0%
CAAATTCTCAATCAGGAATT+TGG - chr7_2:84664178-84664197 None:intergenic 30.0%
!! TAATGCCTCTTCATTTTTGT+GGG + chr7_2:84664421-84664440 Msa1084340:three_prime_UTR 30.0%
GTTGAGGTTGTTAATATGGT+TGG - chr7_2:84655720-84655739 None:intergenic 35.0%
! TCAGTTTCATGTTGTTGTTC+TGG - chr7_2:84655762-84655781 None:intergenic 35.0%
!!! TTTTTGGTGTTGTTGAGGTT+GGG - chr7_2:84655800-84655819 None:intergenic 35.0%
!!! ATTTTTGGTGTTGTTGAGGT+TGG - chr7_2:84655801-84655820 None:intergenic 35.0%
!!! TGAGATTTTTGGTGTTGTTG+AGG - chr7_2:84655805-84655824 None:intergenic 35.0%
CATTCTTTGTAGGTTATGGT+AGG - chr7_2:84655909-84655928 None:intergenic 35.0%
GAGACATTCTTTGTAGGTTA+TGG - chr7_2:84655913-84655932 None:intergenic 35.0%
!! ACATTTTAAGGATGTTGGGT+CGG - chr7_2:84656015-84656034 None:intergenic 35.0%
!! CAGCACATTTTAAGGATGTT+GGG - chr7_2:84656019-84656038 None:intergenic 35.0%
!! TTCATCAACATGGTTTGGTT+TGG - chr7_2:84656278-84656297 None:intergenic 35.0%
GAGAATTCATCAACATGGTT+TGG - chr7_2:84656283-84656302 None:intergenic 35.0%
AGAGTGAGAATTCATCAACA+TGG - chr7_2:84656288-84656307 None:intergenic 35.0%
!! ACAATTCTAGAAAGCGTTTC+AGG + chr7_2:84656309-84656328 Msa1084340:CDS 35.0%
!! CTGAAATTTGCTGAGAAAGT+TGG + chr7_2:84656365-84656384 Msa1084340:CDS 35.0%
TGTTGATCGTAGTGTTCTTA+AGG + chr7_2:84656445-84656464 Msa1084340:CDS 35.0%
ATCGTAGTGTTCTTAAGGTT+TGG + chr7_2:84656450-84656469 Msa1084340:CDS 35.0%
! GTTGTTAAGGTTTTCTCGTT+TGG - chr7_2:84656501-84656520 None:intergenic 35.0%
TTGTGTTCTTCATCTTCAAG+AGG - chr7_2:84656563-84656582 None:intergenic 35.0%
CACAAGAATGTTGAGATTCA+TGG + chr7_2:84656578-84656597 Msa1084340:CDS 35.0%
TTTATGGAAGGTGGTGAATT+TGG + chr7_2:84657378-84657397 Msa1084340:intron 35.0%
TACTACCATAGTCTATAACG+GGG + chr7_2:84657503-84657522 Msa1084340:intron 35.0%
ATATACCCCGTTATAGACTA+TGG - chr7_2:84657511-84657530 None:intergenic 35.0%
CACTAACATAGAAAGAACAG+AGG + chr7_2:84657945-84657964 Msa1084340:intron 35.0%
AAGAGCAACACATGAATACT+AGG - chr7_2:84658121-84658140 None:intergenic 35.0%
TTCAGACTTTGCAACTTAAG+TGG + chr7_2:84658207-84658226 Msa1084340:intron 35.0%
AAAATATGAGAAAGAGGAGG+TGG - chr7_2:84659545-84659564 None:intergenic 35.0%
ATAACAACATGTGTATGGTG+GGG + chr7_2:84659583-84659602 Msa1084340:intron 35.0%
AAACCAAAACAAACTCAGAG+TGG - chr7_2:84659611-84659630 None:intergenic 35.0%
AAGGGGCAATTAAGCAATTA+AGG - chr7_2:84659741-84659760 None:intergenic 35.0%
! AGTCCTACCCCAATTTTTAA+GGG - chr7_2:84659759-84659778 None:intergenic 35.0%
TTCACATCTTTGAATCCACA+TGG + chr7_2:84659864-84659883 Msa1084340:intron 35.0%
TGATTAATAGTCGAGAAGAG+TGG - chr7_2:84660141-84660160 None:intergenic 35.0%
AGATTTGAGAGGTTCGAAAT+AGG + chr7_2:84660225-84660244 Msa1084340:intron 35.0%
! TTTTTCTTCGAAAATCTCGG+GGG + chr7_2:84660252-84660271 Msa1084340:intron 35.0%
ATTAAAGCAACCTCTTGATG+TGG + chr7_2:84660296-84660315 Msa1084340:intron 35.0%
GTATGAGATCTAAACTACGA+TGG - chr7_2:84660637-84660656 None:intergenic 35.0%
ATTCCTAAGAACTAGACTTG+CGG - chr7_2:84660661-84660680 None:intergenic 35.0%
!!! AGGTTTTGAATTTCCCTCTA+TGG + chr7_2:84661361-84661380 Msa1084340:intron 35.0%
!!! GGTTTTGAATTTCCCTCTAT+GGG + chr7_2:84661362-84661381 Msa1084340:intron 35.0%
TTTGGAAGAAAACCCATAGA+GGG - chr7_2:84661377-84661396 None:intergenic 35.0%
CAATGAATTGTCAGTGTGTT+TGG - chr7_2:84661538-84661557 None:intergenic 35.0%
GCTATTGTCTCAATGAGAAA+TGG - chr7_2:84661724-84661743 None:intergenic 35.0%
!! TCCCCTAAAAGCATTATTCT+TGG - chr7_2:84661850-84661869 None:intergenic 35.0%
! TGTGAATTTTCCTGCATCAA+CGG + chr7_2:84662068-84662087 Msa1084340:intron 35.0%
GTATGCATTCAATAGGATGT+TGG + chr7_2:84662171-84662190 Msa1084340:intron 35.0%
ATATGCATTATGTCTGCATC+TGG + chr7_2:84662234-84662253 Msa1084340:CDS 35.0%
GTTGAGTGTTATCATAACCA+AGG + chr7_2:84662455-84662474 Msa1084340:intron 35.0%
! TTTTCTCTTGTCGTAGAATC+AGG + chr7_2:84662528-84662547 Msa1084340:intron 35.0%
CAGTGGTAATAATGGCTTAT+GGG + chr7_2:84663011-84663030 Msa1084340:intron 35.0%
TAATGCTTTGATATCAGGGT+CGG + chr7_2:84663151-84663170 Msa1084340:intron 35.0%
GTATGCTTGTCTAATTCTGA+TGG + chr7_2:84663243-84663262 Msa1084340:CDS 35.0%
GGAACTGCAAATGAATTTGT+AGG + chr7_2:84663333-84663352 Msa1084340:intron 35.0%
CTGCAAATGAATTTGTAGGT+TGG + chr7_2:84663337-84663356 Msa1084340:intron 35.0%
GTAAAACAAATGCAAGACAG+CGG - chr7_2:84663372-84663391 None:intergenic 35.0%
ATCAACTTCTGCCAAAAAAG+GGG + chr7_2:84663501-84663520 Msa1084340:intron 35.0%
AAATCAGTGGAATGAAAAGC+AGG + chr7_2:84663566-84663585 Msa1084340:intron 35.0%
AATCAGTGGAATGAAAAGCA+GGG + chr7_2:84663567-84663586 Msa1084340:intron 35.0%
CTTGATGTTCATCATTTCCT+CGG - chr7_2:84663904-84663923 None:intergenic 35.0%
ATAAGAAAATCAGTGGAGGA+TGG - chr7_2:84664067-84664086 None:intergenic 35.0%
!!! ATCCTCCACTGATTTTCTTA+TGG + chr7_2:84664066-84664085 Msa1084340:intron 35.0%
TACCATAAGAAAATCAGTGG+AGG - chr7_2:84664071-84664090 None:intergenic 35.0%
TCCTGATTGAGAATTTGAGA+TGG + chr7_2:84664181-84664200 Msa1084340:exon 35.0%
TACAACTGTTAACCAGACAT+TGG - chr7_2:84664225-84664244 None:intergenic 35.0%
!! CTAATGCCTCTTCATTTTTG+TGG + chr7_2:84664420-84664439 Msa1084340:three_prime_UTR 35.0%
TATATTTCCCTTCCGTTTCA+AGG + chr7_2:84664520-84664539 Msa1084340:three_prime_UTR 35.0%
!! ATGGTTGGTGCTATTGATGT+TGG - chr7_2:84655705-84655724 None:intergenic 40.0%
! GTTGAGGTTGGGAATTTTGT+GGG - chr7_2:84655789-84655808 None:intergenic 40.0%
! TGTTGAGGTTGGGAATTTTG+TGG - chr7_2:84655790-84655809 None:intergenic 40.0%
!! TATGGTAGGTTGATGGTTGT+TGG - chr7_2:84655895-84655914 None:intergenic 40.0%
! TGTAGGTTATGGTAGGTTGA+TGG - chr7_2:84655902-84655921 None:intergenic 40.0%
AAAAACCATGCAGCAAACCT+AGG + chr7_2:84655933-84655952 Msa1084340:CDS 40.0%
GAATTCACCACAACCATCTA+GGG - chr7_2:84655967-84655986 None:intergenic 40.0%
TGAATTCACCACAACCATCT+AGG - chr7_2:84655968-84655987 None:intergenic 40.0%
!! GCAGCACATTTTAAGGATGT+TGG - chr7_2:84656020-84656039 None:intergenic 40.0%
!! TCCTTAAAATGTGCTGCTTG+TGG + chr7_2:84656023-84656042 Msa1084340:CDS 40.0%
TTCAATGACATGAGTTGTGG+TGG - chr7_2:84656096-84656115 None:intergenic 40.0%
!! AATTTGCTGAGAAAGTTGGG+TGG + chr7_2:84656369-84656388 Msa1084340:CDS 40.0%
!! GTACTAGGAGTGTTAGTTCT+TGG + chr7_2:84657002-84657021 Msa1084340:intron 40.0%
! GGAGTGTTAGTTCTTGGAAT+TGG + chr7_2:84657008-84657027 Msa1084340:intron 40.0%
CTTGTACGTGTGGAAATGTT+TGG + chr7_2:84657066-84657085 Msa1084340:intron 40.0%
TATTCGTGTCTGAGAGAAAG+AGG + chr7_2:84657312-84657331 Msa1084340:intron 40.0%
! TAGTTTGTGGGATGTCGATA+AGG + chr7_2:84657631-84657650 Msa1084340:intron 40.0%
GTCAAAAACCTTAACCCCTT+GGG - chr7_2:84658881-84658900 None:intergenic 40.0%
AGTCAAAAACCTTAACCCCT+TGG - chr7_2:84658882-84658901 None:intergenic 40.0%
ACATCCGCACTTTACGTTAT+GGG + chr7_2:84659492-84659511 Msa1084340:intron 40.0%
CATACCCATAACGTAAAGTG+CGG - chr7_2:84659499-84659518 None:intergenic 40.0%
TAACAACATGTGTATGGTGG+GGG + chr7_2:84659584-84659603 Msa1084340:intron 40.0%
!!! ATCTTGTTTTGGTGAGAGTG+TGG + chr7_2:84659656-84659675 Msa1084340:intron 40.0%
!!! TCTTGTTTTGGTGAGAGTGT+GGG + chr7_2:84659657-84659676 Msa1084340:intron 40.0%
GGGCAATTAAGCAATTAAGG+TGG - chr7_2:84659738-84659757 None:intergenic 40.0%
!! GTCCTACCCCAATTTTTAAG+GGG - chr7_2:84659758-84659777 None:intergenic 40.0%
! CAGTCCTACCCCAATTTTTA+AGG - chr7_2:84659760-84659779 None:intergenic 40.0%
TGTTACTGTTGCATATCCTC+AGG + chr7_2:84659778-84659797 Msa1084340:intron 40.0%
! TTTTCTTCGAAAATCTCGGG+GGG + chr7_2:84660253-84660272 Msa1084340:intron 40.0%
TACATAGAAGCCACATCAAG+AGG - chr7_2:84660309-84660328 None:intergenic 40.0%
! TTTTGAATTTCTGCACCACC+TGG + chr7_2:84661059-84661078 Msa1084340:intron 40.0%
! CTTTGGAAGAAAACCCATAG+AGG - chr7_2:84661378-84661397 None:intergenic 40.0%
AATAAGTGCCAAAACAACCG+TGG - chr7_2:84661651-84661670 None:intergenic 40.0%
TTAGTCCTAGACGAGATATC+AGG + chr7_2:84661669-84661688 Msa1084340:intron 40.0%
TGAGAAATGGCTGAGCATAT+CGG - chr7_2:84661711-84661730 None:intergenic 40.0%
AGATCCTAAAACATCTTGGC+TGG - chr7_2:84662028-84662047 None:intergenic 40.0%
AGGAGGCAACATTATGTATG+AGG + chr7_2:84662296-84662315 Msa1084340:CDS 40.0%
CTGTTGAAACTTGCAGCATA+TGG + chr7_2:84662422-84662441 Msa1084340:intron 40.0%
TACCCATGGTGTTCCAAAAA+AGG + chr7_2:84662603-84662622 Msa1084340:intron 40.0%
!!! TGCCTTTTTTGGAACACCAT+GGG - chr7_2:84662608-84662627 None:intergenic 40.0%
TTTGTGGTCAAATCTGGATG+TGG + chr7_2:84662855-84662874 Msa1084340:intron 40.0%
TCAAATCTGGATGTGGATGT+TGG + chr7_2:84662862-84662881 Msa1084340:intron 40.0%
TTAATGTTAGTGCGTAGCAG+TGG + chr7_2:84662994-84663013 Msa1084340:intron 40.0%
GCAGTGGTAATAATGGCTTA+TGG + chr7_2:84663010-84663029 Msa1084340:intron 40.0%
TCCTATGTCCGTAATGAAAC+CGG + chr7_2:84663198-84663217 Msa1084340:CDS 40.0%
! TCTGATGGACAAATCATAGG+TGG + chr7_2:84663258-84663277 Msa1084340:CDS 40.0%
!! CCTTCTAAGATTACCTGAAC+TGG - chr7_2:84663315-84663334 None:intergenic 40.0%
CCAGTTCAGGTAATCTTAGA+AGG + chr7_2:84663312-84663331 Msa1084340:intron 40.0%
AGAACCGCTCAATATTCACA+AGG - chr7_2:84663394-84663413 None:intergenic 40.0%
TCAACTTCTGCCAAAAAAGG+GGG + chr7_2:84663502-84663521 Msa1084340:intron 40.0%
AAAAAAGGGGGAAATGAGGT+GGG + chr7_2:84663514-84663533 Msa1084340:intron 40.0%
ATTCATTATCAGGTGGTGCT+TGG - chr7_2:84663678-84663697 None:intergenic 40.0%
TAATCCCTACAGGTCATTGT+CGG + chr7_2:84663734-84663753 Msa1084340:intron 40.0%
TGGAAACCTAAACTTGATGC+TGG - chr7_2:84663848-84663867 None:intergenic 40.0%
TGTTCATCATTTCCTCGGAT+TGG - chr7_2:84663899-84663918 None:intergenic 40.0%
TAACCAGCATGTCTTGAATC+TGG - chr7_2:84664007-84664026 None:intergenic 40.0%
! GGTATGAAGTCCAGTGATTT+TGG + chr7_2:84664037-84664056 Msa1084340:intron 40.0%
GGATGGTATACCAAAATCAC+TGG - chr7_2:84664050-84664069 None:intergenic 40.0%
AGCGAAGTTCTCAATATTGC+AGG + chr7_2:84664104-84664123 Msa1084340:intron 40.0%
CTCAATATTGCAGGAAGAAC+AGG + chr7_2:84664113-84664132 Msa1084340:intron 40.0%
GCCATCTCAAATTCTCAATC+AGG - chr7_2:84664185-84664204 None:intergenic 40.0%
! TGAGAATTTGAGATGGCTTG+TGG + chr7_2:84664188-84664207 Msa1084340:exon 40.0%
! GAGAATTTGAGATGGCTTGT+GGG + chr7_2:84664189-84664208 Msa1084340:exon 40.0%
ACAGACCCACAAAAATGAAG+AGG - chr7_2:84664429-84664448 None:intergenic 40.0%
! ATGCTTCCTAGCTTAGTTTG+TGG + chr7_2:84664495-84664514 Msa1084340:three_prime_UTR 40.0%
!! TGCTTCCTAGCTTAGTTTGT+GGG + chr7_2:84664496-84664515 Msa1084340:three_prime_UTR 40.0%
TATAGCCCACAAACTAAGCT+AGG - chr7_2:84664504-84664523 None:intergenic 40.0%
!! ATTGATGTTGGTGGTGGTGT+TGG - chr7_2:84655693-84655712 None:intergenic 45.0%
!! GTTGGTGCTATTGATGTTGG+TGG - chr7_2:84655702-84655721 None:intergenic 45.0%
TTTAAGGATGTTGGGTCGGT+TGG - chr7_2:84656011-84656030 None:intergenic 45.0%
! GCCACAAGCAGCACATTTTA+AGG - chr7_2:84656027-84656046 None:intergenic 45.0%
! ACATGAGTTGTGGTGGAAAG+TGG - chr7_2:84656089-84656108 None:intergenic 45.0%
! AGAGAGCAAGAAGCATGTGA+GGG - chr7_2:84656226-84656245 None:intergenic 45.0%
!! TTTGGAGCTGCAACGTTTTC+CGG - chr7_2:84656260-84656279 None:intergenic 45.0%
CAGAATGAAGGTGGAGTTGT+TGG + chr7_2:84656620-84656639 Msa1084340:CDS 45.0%
GGAGTAACTGTTCGTGCTAA+TGG + chr7_2:84656641-84656660 Msa1084340:CDS 45.0%
!! TTGGCTTTTGCTTGTACGTG+TGG + chr7_2:84657056-84657075 Msa1084340:intron 45.0%
ATGGAAGGTGGTGAATTTGG+TGG + chr7_2:84657381-84657400 Msa1084340:intron 45.0%
TGTGGGCACTTTCCTTATCA+TGG + chr7_2:84657805-84657824 Msa1084340:intron 45.0%
ATGTCACAGTGGTACAAGCA+TGG + chr7_2:84658015-84658034 Msa1084340:intron 45.0%
!! ATTTCTAGCCCAAGGGGTTA+AGG + chr7_2:84658870-84658889 Msa1084340:intron 45.0%
CACATCCGCACTTTACGTTA+TGG + chr7_2:84659491-84659510 Msa1084340:intron 45.0%
!! GGTCCACTCTGAGTTTGTTT+TGG + chr7_2:84659605-84659624 Msa1084340:intron 45.0%
GCTGGTTAGCAGTACGTAAT+GGG - chr7_2:84659684-84659703 None:intergenic 45.0%
! TGCTGGTTAGCAGTACGTAA+TGG - chr7_2:84659685-84659704 None:intergenic 45.0%
TACTGCTAACCAGCAAGTCA+TGG + chr7_2:84659690-84659709 Msa1084340:intron 45.0%
ACTGCTAACCAGCAAGTCAT+GGG + chr7_2:84659691-84659710 Msa1084340:intron 45.0%
TGCCCCTTAAAAATTGGGGT+AGG + chr7_2:84659753-84659772 Msa1084340:intron 45.0%
!! ACTCCGCAAGTCTAGTTCTT+AGG + chr7_2:84660655-84660674 Msa1084340:intron 45.0%
!! TTATGGTAATGGGGTGATGC+AGG + chr7_2:84660937-84660956 Msa1084340:intron 45.0%
ACGTATATCCTTAGCCACCA+CGG + chr7_2:84661631-84661650 Msa1084340:intron 45.0%
CCAAACCTGATATCTCGTCT+AGG - chr7_2:84661677-84661696 None:intergenic 45.0%
CCTAGACGAGATATCAGGTT+TGG + chr7_2:84661674-84661693 Msa1084340:intron 45.0%
AGACGAGATATCAGGTTTGG+AGG + chr7_2:84661677-84661696 Msa1084340:intron 45.0%
GTGGCGAACTTAAAGGAGAA+GGG - chr7_2:84662006-84662025 None:intergenic 45.0%
TCCTAAAACATCTTGGCTGG+TGG - chr7_2:84662025-84662044 None:intergenic 45.0%
TAGTCAAACACCGTTGATGC+AGG - chr7_2:84662081-84662100 None:intergenic 45.0%
!!! GTGCCTTTTTTGGAACACCA+TGG - chr7_2:84662609-84662628 None:intergenic 45.0%
!!! GGATGCACAAGTGCCTTTTT+TGG - chr7_2:84662619-84662638 None:intergenic 45.0%
AATCTGGATGTGGATGTTGG+AGG + chr7_2:84662865-84662884 Msa1084340:intron 45.0%
CTACCTTCAAGAGGACAGAT+AGG + chr7_2:84662930-84662949 Msa1084340:intron 45.0%
GTGCGTAGCAGTGGTAATAA+TGG + chr7_2:84663003-84663022 Msa1084340:intron 45.0%
TCCGGTTTCATTACGGACAT+AGG - chr7_2:84663202-84663221 None:intergenic 45.0%
TATGTCCGTAATGAAACCGG+AGG + chr7_2:84663201-84663220 Msa1084340:CDS 45.0%
ATGTCCGTAATGAAACCGGA+GGG + chr7_2:84663202-84663221 Msa1084340:CDS 45.0%
GATGGACAAATCATAGGTGG+TGG + chr7_2:84663261-84663280 Msa1084340:CDS 45.0%
! CAAATCATAGGTGGTGGTGT+TGG + chr7_2:84663267-84663286 Msa1084340:CDS 45.0%
! AACTGGACCAGCAGCTTTAA+GGG - chr7_2:84663298-84663317 None:intergenic 45.0%
TGCCAAAAAAGGGGGAAATG+AGG + chr7_2:84663510-84663529 Msa1084340:intron 45.0%
!!! CACCTCATTTCCCCCTTTTT+TGG - chr7_2:84663515-84663534 None:intergenic 45.0%
CAAAAAAGGGGGAAATGAGG+TGG + chr7_2:84663513-84663532 Msa1084340:intron 45.0%
ATTATCAGGTGGTGCTTGGT+AGG - chr7_2:84663674-84663693 None:intergenic 45.0%
! TGTACCGACAATGACCTGTA+GGG - chr7_2:84663741-84663760 None:intergenic 45.0%
! ATGTACCGACAATGACCTGT+AGG - chr7_2:84663742-84663761 None:intergenic 45.0%
AACAAGAAGGACACTAGTGC+TGG + chr7_2:84663773-84663792 Msa1084340:CDS 45.0%
GATGAACATCAAGCTATGGG+TGG + chr7_2:84663911-84663930 Msa1084340:CDS 45.0%
CATCCAGATTCAAGACATGC+TGG + chr7_2:84664001-84664020 Msa1084340:CDS 45.0%
ATTGCAGGAAGAACAGGTCA+TGG + chr7_2:84664119-84664138 Msa1084340:intron 45.0%
TTGCAGGAAGAACAGGTCAT+GGG + chr7_2:84664120-84664139 Msa1084340:intron 45.0%
TTGGTCATAGCCTCCATTCT+CGG - chr7_2:84664159-84664178 None:intergenic 45.0%
CAAAGACTGCTGGTATGTAG+TGG - chr7_2:84664254-84664273 None:intergenic 45.0%
CGGATGGCGCATACTATAAA+TGG - chr7_2:84664287-84664306 None:intergenic 45.0%
ATAGTATGCGCCATCCGTTA+AGG + chr7_2:84664290-84664309 Msa1084340:three_prime_UTR 45.0%
!! AGTTAATTAATTAATTAAAA+TGG + chr7_2:84656929-84656948 Msa1084340:intron 5.0%
!! GTTAATTAATTAATTAAAAT+GGG + chr7_2:84656930-84656949 Msa1084340:intron 5.0%
!! GTTTATTAATTAATTAAAAT+GGG + chr7_2:84656952-84656971 Msa1084340:intron 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr7_2:84658465-84658484 None:intergenic 5.0%
!!! AAAAAATTCTAATTTTTTTT+AGG - chr7_2:84658537-84658556 None:intergenic 5.0%
!!! TCAAATTTTTATTAATAAAA+TGG - chr7_2:84660450-84660469 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+TGG + chr7_2:84661202-84661221 Msa1084340:intron 5.0%
!! TGTTTATTATTTATTATAAA+AGG + chr7_2:84661338-84661357 Msa1084340:intron 5.0%
! TGGTGTTGGAGTTGGGGTTA+AGG - chr7_2:84655673-84655692 None:intergenic 50.0%
!! TGGTGTTGGTGTTGGAGTTG+GGG - chr7_2:84655679-84655698 None:intergenic 50.0%
!! GTGGTGTTGGTGTTGGAGTT+GGG - chr7_2:84655680-84655699 None:intergenic 50.0%
!! GGTGCTATTGATGTTGGTGG+TGG - chr7_2:84655699-84655718 None:intergenic 50.0%
TGTTGTGGTGGTTGAAGTGG+TGG - chr7_2:84655869-84655888 None:intergenic 50.0%
!! TGGTGTTGTGGTGGTTGAAG+TGG - chr7_2:84655872-84655891 None:intergenic 50.0%
!! GATGGTTGTTGGTGGTGTTG+TGG - chr7_2:84655884-84655903 None:intergenic 50.0%
!! GGTAGGTTGATGGTTGTTGG+TGG - chr7_2:84655892-84655911 None:intergenic 50.0%
AACCATGCAGCAAACCTAGG+TGG + chr7_2:84655936-84655955 Msa1084340:CDS 50.0%
! GTGGTGGTTCTTCAGGTTCA+CGG - chr7_2:84656070-84656089 None:intergenic 50.0%
GTGGAAAGTGGTGGTTCTTC+AGG - chr7_2:84656077-84656096 None:intergenic 50.0%
! TGAGTTGTGGTGGAAAGTGG+TGG - chr7_2:84656086-84656105 None:intergenic 50.0%
!! GTGGTGGAAGTGGTTGATGA+CGG - chr7_2:84656133-84656152 None:intergenic 50.0%
! GTGGTGGTGAGGAGGAATTT+GGG - chr7_2:84656175-84656194 None:intergenic 50.0%
TAGTAAGAGGAGGAGATCGG+TGG - chr7_2:84656194-84656213 None:intergenic 50.0%
GGGTAGTAAGAGGAGGAGAT+CGG - chr7_2:84656197-84656216 None:intergenic 50.0%
! GAGAGCAAGAAGCATGTGAG+GGG - chr7_2:84656225-84656244 None:intergenic 50.0%
! GAGAGAGCAAGAAGCATGTG+AGG - chr7_2:84656227-84656246 None:intergenic 50.0%
! TGCAACGTTTTCCGGTAAGG+CGG - chr7_2:84656252-84656271 None:intergenic 50.0%
! AGCTGCAACGTTTTCCGGTA+AGG - chr7_2:84656255-84656274 None:intergenic 50.0%
! GAAGGTGGTGAATTTGGTGG+TGG + chr7_2:84657384-84657403 Msa1084340:intron 50.0%
AGGAACTCGGTCAACCCAAA+CGG - chr7_2:84660381-84660400 None:intergenic 50.0%
! CATGTCATTGCTGTTGCTGC+TGG + chr7_2:84660985-84661004 Msa1084340:CDS 50.0%
ACCTGGTAAGTACAGTGACG+CGG + chr7_2:84661076-84661095 Msa1084340:intron 50.0%
CAAAACAACCGTGGTGGCTA+AGG - chr7_2:84661642-84661661 None:intergenic 50.0%
! CTTAGCCACCACGGTTGTTT+TGG + chr7_2:84661640-84661659 Msa1084340:intron 50.0%
AAGTGCCAAAACAACCGTGG+TGG - chr7_2:84661648-84661667 None:intergenic 50.0%
GGGGACACTCTAGTAACATC+TGG + chr7_2:84661865-84661884 Msa1084340:intron 50.0%
GGTGGCGAACTTAAAGGAGA+AGG - chr7_2:84662007-84662026 None:intergenic 50.0%
! TTGGCTGGTGGCGAACTTAA+AGG - chr7_2:84662013-84662032 None:intergenic 50.0%
! GCCACCAGCCAAGATGTTTT+AGG + chr7_2:84662021-84662040 Msa1084340:intron 50.0%
!! ACGGAGAGAGGCATTAGAGA+TGG - chr7_2:84662262-84662281 None:intergenic 50.0%
! CTCCTGAAGATGCTGGTTGA+CGG - chr7_2:84662281-84662300 None:intergenic 50.0%
ATGTTGCCTCCTGAAGATGC+TGG - chr7_2:84662288-84662307 None:intergenic 50.0%
TGCACGCATCTGTGTGCTTA+TGG + chr7_2:84662785-84662804 Msa1084340:intron 50.0%
CGTCCTATCTGTCCTCTTGA+AGG - chr7_2:84662936-84662955 None:intergenic 50.0%
TTCGCCCTCCGGTTTCATTA+CGG - chr7_2:84663209-84663228 None:intergenic 50.0%
! ATCATAGGTGGTGGTGTTGG+TGG + chr7_2:84663270-84663289 Msa1084340:CDS 50.0%
!! TCATAGGTGGTGGTGTTGGT+GGG + chr7_2:84663271-84663290 Msa1084340:CDS 50.0%
!! ACTGGACCAGCAGCTTTAAG+GGG - chr7_2:84663297-84663316 None:intergenic 50.0%
GAACTGGACCAGCAGCTTTA+AGG - chr7_2:84663299-84663318 None:intergenic 50.0%
TAAAGCTGCTGGTCCAGTTC+AGG + chr7_2:84663299-84663318 Msa1084340:CDS 50.0%
TAGGTGTGAAAGCAGGAAGG+TGG - chr7_2:84663655-84663674 None:intergenic 50.0%
TGGTAGGTGTGAAAGCAGGA+AGG - chr7_2:84663658-84663677 None:intergenic 50.0%
TGCTTGGTAGGTGTGAAAGC+AGG - chr7_2:84663662-84663681 None:intergenic 50.0%
! AAGAAGGACACTAGTGCTGG+TGG + chr7_2:84663776-84663795 Msa1084340:CDS 50.0%
!! GACACTAGTGCTGGTGGAAA+AGG + chr7_2:84663782-84663801 Msa1084340:CDS 50.0%
GATGGCAACTTACCAGCAGA+GGG - chr7_2:84663812-84663831 None:intergenic 50.0%
TGATGGCAACTTACCAGCAG+AGG - chr7_2:84663813-84663832 None:intergenic 50.0%
GGTAAGTTGCCATCACCAGT+TGG + chr7_2:84663818-84663837 Msa1084340:CDS 50.0%
TGGAAGAGTCGACTGTTTGG+TGG - chr7_2:84663868-84663887 None:intergenic 50.0%
! CAAACAGTCGACTCTTCCAG+CGG + chr7_2:84663869-84663888 Msa1084340:CDS 50.0%
! AAACAGTCGACTCTTCCAGC+GGG + chr7_2:84663870-84663889 Msa1084340:CDS 50.0%
! CATGCTGGTTATGACCTGTC+AGG + chr7_2:84664016-84664035 Msa1084340:CDS 50.0%
CACTGGACTTCATACCTGAC+AGG - chr7_2:84664033-84664052 None:intergenic 50.0%
TGGTCATAGCCTCCATTCTC+GGG - chr7_2:84664158-84664177 None:intergenic 50.0%
TACCAGCAGTCTTTGTCACG+AGG + chr7_2:84664259-84664278 Msa1084340:three_prime_UTR 50.0%
GTCAGAAGCCACGACCTTAA+CGG - chr7_2:84664307-84664326 None:intergenic 50.0%
GCAAGCACCTTGAAACGGAA+GGG - chr7_2:84664530-84664549 None:intergenic 50.0%
AGCAAGCACCTTGAAACGGA+AGG - chr7_2:84664531-84664550 None:intergenic 50.0%
!! GGTGGTGTTGGTGTTGGAGT+TGG - chr7_2:84655681-84655700 None:intergenic 55.0%
!! GTTGGTGGTGGTGTTGGTGT+TGG - chr7_2:84655687-84655706 None:intergenic 55.0%
TGTGGTGGTTGAAGTGGTGG+TGG - chr7_2:84655866-84655885 None:intergenic 55.0%
!! GGTTGTTGGTGGTGTTGTGG+TGG - chr7_2:84655881-84655900 None:intergenic 55.0%
!! GACCACCTAGGTTTGCTGCA+TGG - chr7_2:84655941-84655960 None:intergenic 55.0%
! CATCTAGGGCATGACCACCT+AGG - chr7_2:84655953-84655972 None:intergenic 55.0%
CTAGGTGGTCATGCCCTAGA+TGG + chr7_2:84655951-84655970 Msa1084340:CDS 55.0%
GGTCATGCCCTAGATGGTTG+TGG + chr7_2:84655957-84655976 Msa1084340:CDS 55.0%
GTTCACGGCGGTGGAAGTTA+CGG - chr7_2:84656055-84656074 None:intergenic 55.0%
! GTGGTTCTTCAGGTTCACGG+CGG - chr7_2:84656067-84656086 None:intergenic 55.0%
!! AGTGGTTGATGACGGTGGTG+AGG - chr7_2:84656125-84656144 None:intergenic 55.0%
!! GTGGAAGTGGTTGATGACGG+TGG - chr7_2:84656130-84656149 None:intergenic 55.0%
!! GAAAAGGGTGGTGGTGGAAG+TGG - chr7_2:84656143-84656162 None:intergenic 55.0%
TTTGGGCTCCGGTGGGAAAA+GGG - chr7_2:84656158-84656177 None:intergenic 55.0%
ATTTGGGCTCCGGTGGGAAA+AGG - chr7_2:84656159-84656178 None:intergenic 55.0%
GTGAGGAGGAATTTGGGCTC+CGG - chr7_2:84656169-84656188 None:intergenic 55.0%
! GGTGGTGGTGAGGAGGAATT+TGG - chr7_2:84656176-84656195 None:intergenic 55.0%
TAAGAGGAGGAGATCGGTGG+TGG - chr7_2:84656191-84656210 None:intergenic 55.0%
! AGCAAGAAGCATGTGAGGGG+CGG - chr7_2:84656222-84656241 None:intergenic 55.0%
! AACGTTTTCCGGTAAGGCGG+CGG - chr7_2:84656249-84656268 None:intergenic 55.0%
!! GACGCGAGATAGAGAGTGTC+TGG + chr7_2:84659463-84659482 Msa1084340:intron 55.0%
CTAACCAGCAAGTCATGGGC+TGG + chr7_2:84659695-84659714 Msa1084340:intron 55.0%
! AGAACCAGCCCATGACTTGC+TGG - chr7_2:84659702-84659721 None:intergenic 55.0%
!! AGCAAGTCATGGGCTGGTTC+TGG + chr7_2:84659701-84659720 Msa1084340:intron 55.0%
TCTTCGAAAATCTCGGGGGG+TGG + chr7_2:84660256-84660275 Msa1084340:intron 55.0%
ATCTCGGGGGGTGGAAAACA+TGG + chr7_2:84660265-84660284 Msa1084340:intron 55.0%
GGGGGTGGAAAACATGGTAG+AGG + chr7_2:84660271-84660290 Msa1084340:intron 55.0%
GATGCAGGCAATGCAGGACA+AGG + chr7_2:84660952-84660971 Msa1084340:intron 55.0%
! CATTGCTGTTGCTGCTGGTG+AGG + chr7_2:84660990-84661009 Msa1084340:CDS 55.0%
GCGTCACTGTACTTACCAGG+TGG - chr7_2:84661077-84661096 None:intergenic 55.0%
CCTGGTAAGTACAGTGACGC+GGG + chr7_2:84661077-84661096 Msa1084340:intron 55.0%
! AGATGCTGGTTGACGGAGAG+AGG - chr7_2:84662274-84662293 None:intergenic 55.0%
CTCCGTCAACCAGCATCTTC+AGG + chr7_2:84662276-84662295 Msa1084340:CDS 55.0%
CGTCAACCAGCATCTTCAGG+AGG + chr7_2:84662279-84662298 Msa1084340:CDS 55.0%
AATGAAACCGGAGGGCGAAG+TGG + chr7_2:84663210-84663229 Msa1084340:CDS 55.0%
GGAAAAGGTGATCCCTCTGC+TGG + chr7_2:84663797-84663816 Msa1084340:CDS 55.0%
GGCGAGCCAGCATCAAGTTT+AGG + chr7_2:84663839-84663858 Msa1084340:CDS 55.0%
CGCTGGAAGAGTCGACTGTT+TGG - chr7_2:84663871-84663890 None:intergenic 55.0%
ACCTCCCAGGTCTACAGAGT+GGG + chr7_2:84663973-84663992 Msa1084340:CDS 55.0%
TCTCACCAGTCTCCCGAGAA+TGG + chr7_2:84664143-84664162 Msa1084340:CDS 55.0%
! GAGATGGCTTGTGGGTTCGA+TGG + chr7_2:84664197-84664216 Msa1084340:three_prime_UTR 55.0%
GGTTCGATGGCACCAATGTC+TGG + chr7_2:84664210-84664229 Msa1084340:three_prime_UTR 55.0%
CACCTCGTGACAAAGACTGC+TGG - chr7_2:84664264-84664283 None:intergenic 55.0%
GAAGCCACGACCTTAACGGA+TGG - chr7_2:84664303-84664322 None:intergenic 55.0%
!! TGAAGTGGTGGTGGTGGTGG+TGG - chr7_2:84655857-84655876 None:intergenic 60.0%
!! GGTTGAAGTGGTGGTGGTGG+TGG - chr7_2:84655860-84655879 None:intergenic 60.0%
!! GGTGGTTGAAGTGGTGGTGG+TGG - chr7_2:84655863-84655882 None:intergenic 60.0%
!! GGGTCGGTTGGTGTTGCTGT+GGG - chr7_2:84655999-84656018 None:intergenic 60.0%
!! TGGGTCGGTTGGTGTTGCTG+TGG - chr7_2:84656000-84656019 None:intergenic 60.0%
! GTTCTTCAGGTTCACGGCGG+TGG - chr7_2:84656064-84656083 None:intergenic 60.0%
! CACCACCACCCTTTTCCCAC+CGG + chr7_2:84656147-84656166 Msa1084340:CDS 60.0%
GGAGGAATTTGGGCTCCGGT+GGG - chr7_2:84656165-84656184 None:intergenic 60.0%
AGGAGGAATTTGGGCTCCGG+TGG - chr7_2:84656166-84656185 None:intergenic 60.0%
! AGAAGCATGTGAGGGGCGGA+GGG - chr7_2:84656218-84656237 None:intergenic 60.0%
! AAGAAGCATGTGAGGGGCGG+AGG - chr7_2:84656219-84656238 None:intergenic 60.0%
!! GTCATGGGCTGGTTCTGGAC+TGG + chr7_2:84659706-84659725 Msa1084340:intron 60.0%
TGGGGTGATGCAGGCAATGC+AGG + chr7_2:84660946-84660965 Msa1084340:intron 60.0%
CCCGCGTCACTGTACTTACC+AGG - chr7_2:84661080-84661099 None:intergenic 60.0%
AAGACCACCACTTCGCCCTC+CGG - chr7_2:84663220-84663239 None:intergenic 60.0%
!! CTTGATGCTGGCTCGCCAAC+TGG - chr7_2:84663836-84663855 None:intergenic 60.0%
TCCAGCGGGAATCCAATCCG+AGG + chr7_2:84663884-84663903 Msa1084340:CDS 60.0%
! TCCTCGGATTGGATTCCCGC+TGG - chr7_2:84663888-84663907 None:intergenic 60.0%
GTTTGCACGTGACACCTCCC+AGG + chr7_2:84663960-84663979 Msa1084340:CDS 60.0%
CACCTCCCAGGTCTACAGAG+TGG + chr7_2:84663972-84663991 Msa1084340:CDS 60.0%
CCTCCCAGGTCTACAGAGTG+GGG + chr7_2:84663974-84663993 Msa1084340:CDS 60.0%
CTCCCAGGTCTACAGAGTGG+GGG + chr7_2:84663975-84663994 Msa1084340:CDS 60.0%
CTCCCCCACTCTGTAGACCT+GGG - chr7_2:84663980-84663999 None:intergenic 60.0%
ACTCCCCCACTCTGTAGACC+TGG - chr7_2:84663981-84664000 None:intergenic 60.0%
CACCAGTCTCCCGAGAATGG+AGG + chr7_2:84664146-84664165 Msa1084340:CDS 60.0%
AGCCTCCATTCTCGGGAGAC+TGG - chr7_2:84664151-84664170 None:intergenic 60.0%
TGCGCCATCCGTTAAGGTCG+TGG + chr7_2:84664296-84664315 Msa1084340:three_prime_UTR 60.0%
CACGGCGGTGGAAGTTACGG+TGG - chr7_2:84656052-84656071 None:intergenic 65.0%
! CGGTGGGAAAAGGGTGGTGG+TGG - chr7_2:84656149-84656168 None:intergenic 65.0%
CTCCGGTGGGAAAAGGGTGG+TGG - chr7_2:84656152-84656171 None:intergenic 65.0%
! GGAGATCGGTGGTGGTGAGG+AGG - chr7_2:84656183-84656202 None:intergenic 65.0%
! GGAGGAGATCGGTGGTGGTG+AGG - chr7_2:84656186-84656205 None:intergenic 65.0%
GGCGGAGGGGTAGTAAGAGG+AGG - chr7_2:84656204-84656223 None:intergenic 65.0%
AGGGGCGGAGGGGTAGTAAG+AGG - chr7_2:84656207-84656226 None:intergenic 65.0%
GAAGCATGTGAGGGGCGGAG+GGG - chr7_2:84656217-84656236 None:intergenic 65.0%
TGCTCTCTCCGCCGCCTTAC+CGG + chr7_2:84656238-84656257 Msa1084340:CDS 65.0%
GAAACCGGAGGGCGAAGTGG+TGG + chr7_2:84663213-84663232 Msa1084340:CDS 65.0%
GGTGGGCCCCTTAAAGCTGC+TGG + chr7_2:84663288-84663307 Msa1084340:CDS 65.0%
!! GCTGGCTCGCCAACTGGTGA+TGG - chr7_2:84663830-84663849 None:intergenic 65.0%
CCCCACTCTGTAGACCTGGG+AGG - chr7_2:84663977-84663996 None:intergenic 65.0%
GGGCTCCGGTGGGAAAAGGG+TGG - chr7_2:84656155-84656174 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84655660 84664552 84655660 ID=Msa1084340;Name=Msa1084340
chr7_2 mRNA 84655660 84664552 84655660 ID=Msa1084340-mRNA-1;Parent=Msa1084340;Name=Msa1084340-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.6|0.5|0.83|1|1|6|362|565
chr7_2 exon 84655660 84656662 84655660 ID=Msa1084340-mRNA-1:exon:22651;Parent=Msa1084340-mRNA-1
chr7_2 exon 84660959 84661011 84660959 ID=Msa1084340-mRNA-1:exon:22652;Parent=Msa1084340-mRNA-1
chr7_2 exon 84662186 84662317 84662186 ID=Msa1084340-mRNA-1:exon:22653;Parent=Msa1084340-mRNA-1
chr7_2 exon 84663168 84663320 84663168 ID=Msa1084340-mRNA-1:exon:22654;Parent=Msa1084340-mRNA-1
chr7_2 exon 84663746 84664037 84663746 ID=Msa1084340-mRNA-1:exon:22655;Parent=Msa1084340-mRNA-1
chr7_2 exon 84664126 84664552 84664126 ID=Msa1084340-mRNA-1:exon:22656;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84655660 84656662 84655660 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84660959 84661011 84660959 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84662186 84662317 84662186 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84663168 84663320 84663168 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84663746 84664037 84663746 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 CDS 84664126 84664190 84664126 ID=Msa1084340-mRNA-1:cds;Parent=Msa1084340-mRNA-1
chr7_2 three_prime_UTR 84664191 84664552 84664191 ID=Msa1084340-mRNA-1:three_prime_utr;Parent=Msa1084340-mRNA-1
Gene Sequence

>Msa1084340

ATGGACATAACCTTAACCCCAACTCCAACACCAACACCACCACCAACATCAATAGCACCAACCATATTAACAACCTCAACAACAACCTTAACTAAATCACCAGAACAACAACATGAAACTGAAACACCCACAAAATTCCCAACCTCAACAACACCAAAAATCTCACCTTTTTCAAATGGTGTTCTCAAACGTTTCCACCACCACCACCACCACTTCAACCACCACAACACCACCAACAACCATCAACCTACCATAACCTACAAAGAATGTCTCAAAAACCATGCAGCAAACCTAGGTGGTCATGCCCTAGATGGTTGTGGTGAATTCATGACATCACCCACAGCAACACCAACCGACCCAACATCCTTAAAATGTGCTGCTTGTGGCTGCCACCGTAACTTCCACCGCCGTGAACCTGAAGAACCACCACTTTCCACCACAACTCATGTCATTGAATATCAACCTCACCACCGTCATCAACCACTTCCACCACCACCCTTTTCCCACCGGAGCCCAAATTCCTCCTCACCACCACCGATCTCCTCCTCTTACTACCCCTCCGCCCCTCACATGCTTCTTGCTCTCTCCGCCGCCTTACCGGAAAACGTTGCAGCTCCAAACCAAACCATGTTGATGAATTCTCACTCTAACAATTCTAGAAAGCGTTTCAGGACAAAGTTTACACAAGATCAGAAAGATAAGATGCTGAAATTTGCTGAGAAAGTTGGGTGGAAGATGCAGAAAAAAGATGATGAATTTGTTCATGAGTTTTGTAATGAGATTGGTGTTGATCGTAGTGTTCTTAAGGTTTGGATGCATAACAACAAGAACACTTTAGCCAAACGAGAAAACCTTAACAACAATGAGAATATTAATGATGGTGTTAAGAGTTTTCAGCTACCTCTTGAAGATGAAGAACACAAGAATGTTGAGATTCATGGTCTTAATCACAATCATTATCAGAATGAAGGTGGAGTTGTTGGAGTAACTGTTCGTGCTAATGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGCAATTTATGCAACAAAATAGGGGTGAGATATGCATTATGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCAGCATCTTCAGGAGGCAACATTATGTATGAGGGTCGGTTTGATATCATTTCGCTTACTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGCGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTCGGTACATTTTTTATGGACAACAAGAAGGACACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAGTTTAGGTTTCCACCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAACTTGGTTTGCACGTGACACCTCCCAGGTCTACAGAGTGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGAAGAACAGGTCATGGGTCTCACCAGTCTCCCGAGAATGGAGGCTATGACCAAATTCCTGATTGA
Protein sequence

>Msa1084340

MDITLTPTPTPTPPPTSIAPTILTTSTTTLTKSPEQQHETETPTKFPTSTTPKISPFSNGVLKRFHHHHHHFNHHNTTNNHQPTITYKECLKNHAANLGGHALDGCGEFMTSPTATPTDPTSLKCAACGCHRNFHRREPEEPPLSTTTHVIEYQPHHRHQPLPPPPFSHRSPNSSSPPPISSSYYPSAPHMLLALSAALPENVAAPNQTMLMNSHSNNSRKRFRTKFTQDQKDKMLKFAEKVGWKMQKKDDEFVHEFCNEIGVDRSVLKVWMHNNKNTLAKRENLNNNENINDGVKSFQLPLEDEEHKNVEIHGLNHNHYQNEGGVVGVTVRANGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQNRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFMDNKKDTSAGGKGDPSAGKLPSPVGEPASSLGFHQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRSTEWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD*