AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433060 MtrunA17_Chr2g0320641 86.335 483 27 3 1 483 1 444 0.0 813
Msa1433060 MtrunA17_Chr8g0380621 22.951 366 242 8 138 483 75 420 1.53e-18 87.8
Msa1433060 MtrunA17_Chr8g0384941 26.440 382 231 11 129 472 43 412 1.55e-15 78.6
Msa1433060 MtrunA17_Chr1g0187901 25.613 367 234 9 129 474 33 381 7.28e-15 76.3
Msa1433060 MtrunA17_Chr1g0165861 25.389 193 124 5 290 470 7 191 3.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433060 AT5G22830.1 71.159 371 73 3 113 483 123 459 2.23e-172 493
Msa1433060 AT5G22830.2 71.159 371 73 3 113 483 123 459 2.23e-172 493
Msa1433060 AT5G09690.1 24.156 385 238 7 123 483 30 384 5.04e-20 92.4
Msa1433060 AT5G09690.2 24.031 387 236 8 123 483 41 395 5.43e-20 92.4
Msa1433060 AT5G09690.12 23.656 372 223 6 123 471 41 374 3.10e-18 87.0
Msa1433060 AT5G64560.1 25.538 372 231 10 136 482 41 391 1.28e-16 82.0
Msa1433060 AT1G80900.2 24.265 408 242 9 123 483 54 441 1.65e-15 79.0
Msa1433060 AT1G80900.1 24.265 408 242 9 123 483 54 441 1.65e-15 79.0
Msa1433060 AT1G16010.3 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1433060 AT1G16010.1 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1433060 AT1G16010.2 24.755 408 237 12 123 482 54 439 1.21e-14 76.3
Msa1433060 AT4G28580.1 20.161 372 238 10 137 483 70 407 4.45e-12 68.2

Find 164 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTATAGCTGTCAGTTTA+AGG 0.106735 tig0027224:+27728 Msa1433060:CDS
TTCATGATTTCAGGCATATT+TGG 0.179020 tig0027224:+28871 Msa1433060:intron
GCAGATGCTGCTTGATCTTC+TGG 0.217701 tig0027224:+26966 Msa1433060:CDS
AATACGGAGGATATGTATTA+TGG 0.232489 tig0027224:+27002 Msa1433060:CDS
ACCACATCTGGGATTATTAT+TGG 0.241757 tig0027224:+29051 Msa1433060:CDS
ATTTAATGCAGTTTGCATTT+TGG 0.259440 tig0027224:+29025 Msa1433060:intron
ATGAATAATTTATCCGGATT+TGG 0.261474 tig0027224:-22846 None:intergenic
TTCACTTTAGTTGATAATAT+TGG 0.271055 tig0027224:+29946 Msa1433060:three_prime_UTR
GGCCCTCCATTGTTGCTCTT+GGG 0.287052 tig0027224:-24846 None:intergenic
GCCTTACCAAATCGGATAAC+TGG 0.292260 tig0027224:+26785 Msa1433060:CDS
TGGCCCTCCATTGTTGCTCT+TGG 0.305119 tig0027224:-24847 None:intergenic
TACTTATATTTGATTATAAT+CGG 0.307648 tig0027224:+24662 Msa1433060:CDS
GCACTGAGCATTCCACATTA+TGG 0.309684 tig0027224:-27053 None:intergenic
AGGATTGCAACCACCTCTTC+TGG 0.321443 tig0027224:+23276 Msa1433060:CDS
TACCAACCTTGTTCCGTTCC+CGG 0.326223 tig0027224:+22902 Msa1433060:five_prime_UTR
TCAATCTACGGAAATGGATT+TGG 0.328492 tig0027224:+29643 Msa1433060:three_prime_UTR
AAATTCAATGCCTTCTTTGC+TGG 0.336908 tig0027224:+24239 Msa1433060:CDS
CTTAGAACCTCGTGTGAGTA+TGG 0.342447 tig0027224:+26043 Msa1433060:CDS
CATATCCTCCGTATTTCATC+TGG 0.346335 tig0027224:-26994 None:intergenic
GGAGGAAATTGAGATGCTTC+TGG 0.351803 tig0027224:+27209 Msa1433060:CDS
TCGATTTCAAATGGCATTGA+TGG 0.352449 tig0027224:-24867 None:intergenic
CCAAATTGCTAGGTTGAGTT+AGG 0.366760 tig0027224:+26922 Msa1433060:intron
TCTTGATTCTGCAAGGGAAA+TGG 0.368944 tig0027224:+27702 Msa1433060:CDS
ATATCCCCAGTTATCCGATT+TGG 0.369292 tig0027224:-26791 None:intergenic
GGAATCAGACGCGACGGTTT+CGG 0.372599 tig0027224:-23187 None:intergenic
ACTGCTTCACAGGTTCATAA+TGG 0.379206 tig0027224:+29763 Msa1433060:intron
TCGGATAACTGGGGATATAC+TGG 0.379701 tig0027224:+26796 Msa1433060:CDS
CGCTAGGTTGTTGCTTGTGT+GGG 0.382031 tig0027224:+29820 Msa1433060:three_prime_UTR
AGAAATTGTACAATAAATAA+AGG 0.382181 tig0027224:+27027 Msa1433060:CDS
CAAAGATCAATCTACGGAAA+TGG 0.393215 tig0027224:+29637 Msa1433060:three_prime_UTR
GCTTTCAAGAATACAACGTT+TGG 0.393821 tig0027224:+26004 Msa1433060:CDS
ACCATAATAAAACAGGTATC+TGG 0.398082 tig0027224:+30077 Msa1433060:three_prime_UTR
ATCTGGCTCCATTAATTGTT+GGG 0.403216 tig0027224:+30094 Msa1433060:three_prime_UTR
CCTAGCGAAGAGTCTCTTGA+TGG 0.410988 tig0027224:-29804 None:intergenic
TCAGACGAAACTTCAAATAT+AGG 0.411397 tig0027224:+29132 Msa1433060:three_prime_UTR
GCCCTCCATTGTTGCTCTTG+GGG 0.412124 tig0027224:-24845 None:intergenic
TTTAATTTCTTCGTAAGGAT+TGG 0.415238 tig0027224:-30038 None:intergenic
TTCTTGAGGCCTTACCAAAT+CGG 0.421971 tig0027224:+26777 Msa1433060:CDS
ATAGAACGAACTTCATAAAC+AGG 0.428110 tig0027224:-23327 None:intergenic
CACGGAGGCTTGAAGTTAGC+AGG 0.431686 tig0027224:+28230 Msa1433060:CDS
GTTCCTCAAGATAGGACTTC+AGG 0.433942 tig0027224:-28900 None:intergenic
AGTGGCGACGGTGGAGGTTA+CGG 0.436072 tig0027224:-22937 None:intergenic
ATCCATGCACTGCGTGACTC+TGG 0.443866 tig0027224:-30011 None:intergenic
TCGTATTAGCAAACAAACTT+TGG 0.451649 tig0027224:+26826 Msa1433060:CDS
AAATGCATGAATAATTTATC+CGG 0.456117 tig0027224:-22852 None:intergenic
GTATGCTATACTTCTAAACT+TGG 0.456498 tig0027224:+24606 Msa1433060:CDS
TATCTGGCTCCATTAATTGT+TGG 0.458068 tig0027224:+30093 Msa1433060:three_prime_UTR
GTGCACAATCACTGCATTTG+TGG 0.458974 tig0027224:-29615 None:intergenic
CAACAGACCTCGATTTCAAA+TGG 0.463876 tig0027224:-24876 None:intergenic
TTATTCAGGTCTTCGTCCAC+GGG 0.464836 tig0027224:+24182 Msa1433060:intron
CAGGGTGGAACTGCTTCTCC+AGG 0.465720 tig0027224:+28249 Msa1433060:CDS
TTCTAGAGTCATTGCTGCCT+CGG 0.468702 tig0027224:+24817 Msa1433060:CDS
TGCACAATCACTGCATTTGT+GGG 0.470159 tig0027224:-29614 None:intergenic
CTCAGTGCCTTTAGACAAGC+AGG 0.471829 tig0027224:+27068 Msa1433060:CDS
ATACGGAGGATATGTATTAT+GGG 0.472338 tig0027224:+27003 Msa1433060:CDS
TCTTGTGAAAGTTTGAATGA+TGG 0.472966 tig0027224:+30132 Msa1433060:three_prime_UTR
AATTATTTAATTTCTTCGTA+AGG 0.478443 tig0027224:-30043 None:intergenic
AGATATTATACCAGCAAAGA+AGG 0.478493 tig0027224:-24249 None:intergenic
CAAAATATGTACCTGCTACA+AGG 0.478564 tig0027224:-28300 None:intergenic
GCAGTTGGTGCCCTTGTAGC+AGG 0.482970 tig0027224:+28289 Msa1433060:CDS
CATTTCACCGGCTTGAGCGC+CGG 0.483931 tig0027224:-23123 None:intergenic
GATTTACACCATAATAAAAC+AGG 0.490449 tig0027224:+30070 Msa1433060:three_prime_UTR
CCCAGTTATCCGATTTGGTA+AGG 0.493190 tig0027224:-26786 None:intergenic
GCTCAAGGGCAGGAGCTCTC+AGG 0.495202 tig0027224:+26944 Msa1433060:CDS
AAAGGTTGGAAGCGAAAGTG+AGG 0.504236 tig0027224:-22997 None:intergenic
TTCATCATCAACAGCTTCAT+CGG 0.505527 tig0027224:-23208 None:intergenic
ATTATTCAGGTCTTCGTCCA+CGG 0.515753 tig0027224:+24181 Msa1433060:intron
TCGGTTTCAGCGTCGTTCCA+CGG 0.517395 tig0027224:-23168 None:intergenic
TGCATGCCGGGAACGGAACA+AGG 0.518041 tig0027224:-22908 None:intergenic
GTTGTAGAAGTGAAATCAGA+TGG 0.519105 tig0027224:+23561 Msa1433060:CDS
TCGCTAGGTTGTTGCTTGTG+TGG 0.519298 tig0027224:+29819 Msa1433060:three_prime_UTR
CCTTACCAAATCGGATAACT+GGG 0.519888 tig0027224:+26786 Msa1433060:CDS
ACTTCTGAATTTAACTAACA+TGG 0.520719 tig0027224:+22957 Msa1433060:exon
TCAGCAACCTGCTTGTCTAA+AGG 0.527323 tig0027224:-27075 None:intergenic
GAAGAGGTGGTTGCAATCCT+CGG 0.527378 tig0027224:-23273 None:intergenic
TTCTGGAAAATTATCTCCAA+AGG 0.529417 tig0027224:+27226 Msa1433060:CDS
TGGAGGACCCAGATGAAATA+CGG 0.529419 tig0027224:+26986 Msa1433060:CDS
ATCATCGCCGGCGCTCAAGC+CGG 0.529485 tig0027224:+23116 Msa1433060:CDS
CACCACACGTTCCTCAAGAT+AGG 0.530197 tig0027224:-28908 None:intergenic
GTCCAGAGTCACGCAGTGCA+TGG 0.530398 tig0027224:+30009 Msa1433060:three_prime_UTR
GGAACATTCTGTGTGGCAGT+TGG 0.533059 tig0027224:+28274 Msa1433060:CDS
CTCATGATATGTAGAGGAGG+AGG 0.534424 tig0027224:+27188 Msa1433060:intron
AACGGAACAAGGTTGGTAGT+TGG 0.534970 tig0027224:-22897 None:intergenic
GTGGATCTACTGCATTTCAC+CGG 0.543097 tig0027224:-23135 None:intergenic
TTCAGAAGTGGCGACGGTGG+AGG 0.543793 tig0027224:-22943 None:intergenic
GTGAGAGATTCGTGGAATTG+TGG 0.544397 tig0027224:-23063 None:intergenic
AAAATATGTACCTGCTACAA+GGG 0.544963 tig0027224:-28299 None:intergenic
AATCTCTCACTCTTCTTCGC+CGG 0.546307 tig0027224:+23076 Msa1433060:CDS
AAAGGCTTCTTGATTCTGCA+AGG 0.546966 tig0027224:+27695 Msa1433060:CDS
CGGTGAGGTCGGAGAAGAAG+AGG 0.549065 tig0027224:-23038 None:intergenic
ATGATATGTAGAGGAGGAGG+AGG 0.550490 tig0027224:+27191 Msa1433060:intron
CTTGTCACGGTCAAGCTGAA+AGG 0.554270 tig0027224:+27677 Msa1433060:CDS
GTCGGAGAAGAAGAGGTAGT+TGG 0.555331 tig0027224:-23031 None:intergenic
GTGGAACTGCTTCTCCAGGT+TGG 0.558353 tig0027224:+28253 Msa1433060:CDS
TCTGGAGATTCTCTATCGCT+CGG 0.560572 tig0027224:+23294 Msa1433060:CDS
GTTGAGTTAGGCTCAAGGGC+AGG 0.569703 tig0027224:+26934 Msa1433060:CDS
TTTAGACAAGCAGGTTGCTG+AGG 0.573002 tig0027224:+27077 Msa1433060:CDS
TATGCTATACTTCTAAACTT+GGG 0.574188 tig0027224:+24607 Msa1433060:CDS
TTAAACCCCAAGAGCAACAA+TGG 0.574463 tig0027224:+24840 Msa1433060:CDS
ATCAATGCCATTTGAAATCG+AGG 0.574990 tig0027224:+24869 Msa1433060:CDS
ACCCCAAGAGCAACAATGGA+GGG 0.575827 tig0027224:+24844 Msa1433060:CDS
ACATCTGGGATTATTATTGG+TGG 0.576146 tig0027224:+29054 Msa1433060:CDS
CTAGGTTGAGTTAGGCTCAA+GGG 0.577286 tig0027224:+26930 Msa1433060:intron
TAGTTGGTGCGCGTGAGGAA+AGG 0.579052 tig0027224:-23015 None:intergenic
AGTGTAAAAGACGACGCAGA+AGG 0.580230 tig0027224:+25595 Msa1433060:CDS
ATGTTAGTTAAATTCAGAAG+TGG 0.580810 tig0027224:-22955 None:intergenic
AGATTCGTGGAATTGTGGTT+CGG 0.582093 tig0027224:-23058 None:intergenic
GCTAGGTTGAGTTAGGCTCA+AGG 0.583177 tig0027224:+26929 Msa1433060:intron
CAAGAATACAACGTTTGGAG+CGG 0.585508 tig0027224:+26009 Msa1433060:CDS
ACGTTTGGAGCGGAGACTGA+TGG 0.587474 tig0027224:+26019 Msa1433060:CDS
GAGCGCCGGCGATGATGTAA+CGG 0.587494 tig0027224:-23109 None:intergenic
ACCAATAATAATCCCAGATG+TGG 0.587896 tig0027224:-29052 None:intergenic
TGCCGGGAACGGAACAAGGT+TGG 0.588656 tig0027224:-22904 None:intergenic
AACTTTCACAAGAACTCGGT+AGG 0.589539 tig0027224:-30122 None:intergenic
GAATTGTGGTTCGGTGAGGT+CGG 0.590714 tig0027224:-23049 None:intergenic
AGAGGTAGTTGGTGCGCGTG+AGG 0.591230 tig0027224:-23020 None:intergenic
CCACACAGAATGTTCCAACC+TGG 0.592527 tig0027224:-28267 None:intergenic
CCATCAAGAGACTCTTCGCT+AGG 0.592834 tig0027224:+29804 Msa1433060:three_prime_UTR
CTAGGTTCAAGCTCTTCTTG+AGG 0.592984 tig0027224:+26763 Msa1433060:intron
GATGGAGAAAGAATACAGAC+TGG 0.594103 tig0027224:+30150 Msa1433060:three_prime_UTR
AAGGCTTCTTGATTCTGCAA+GGG 0.595349 tig0027224:+27696 Msa1433060:CDS
GTTAAATTCAGAAGTGGCGA+CGG 0.598296 tig0027224:-22949 None:intergenic
TGGTGCGCGTGAGGAAAGGT+TGG 0.598690 tig0027224:-23011 None:intergenic
GACGCAGAAGGATCTAAAGA+TGG 0.601591 tig0027224:+25607 Msa1433060:CDS
TGTGCACAAAGATCAATCTA+CGG 0.603651 tig0027224:+29631 Msa1433060:three_prime_UTR
TTAGACAAGCAGGTTGCTGA+GGG 0.603811 tig0027224:+27078 Msa1433060:CDS
TTCAAACTTTCACAAGAACT+CGG 0.604203 tig0027224:-30126 None:intergenic
TGTATAACTACCTCAGAGCA+AGG 0.605896 tig0027224:+29097 Msa1433060:CDS
GAAGAAGAGTGAGAGATTCG+TGG 0.609323 tig0027224:-23071 None:intergenic
GAGTCACGCAGTGCATGGAT+CGG 0.611874 tig0027224:+30014 Msa1433060:three_prime_UTR
AATCTCCGTTACATCATCGC+CGG 0.612622 tig0027224:+23104 Msa1433060:CDS
AAATAAAGGAAACCATAATG+TGG 0.613910 tig0027224:+27041 Msa1433060:CDS
AGACAATTATTGAAGTCTAG+TGG 0.615214 tig0027224:+23612 Msa1433060:CDS
GATGCTGCTTGATCTTCTGG+AGG 0.616845 tig0027224:+26969 Msa1433060:CDS
ATATCCTCCGTATTTCATCT+GGG 0.617091 tig0027224:-26993 None:intergenic
GAACCTGAAGTCCTATCTTG+AGG 0.617632 tig0027224:+28897 Msa1433060:CDS
GGTAACAATTCCATTGCAGA+AGG 0.618379 tig0027224:+25628 Msa1433060:CDS
CGTGGAATTGTGGTTCGGTG+AGG 0.623398 tig0027224:-23053 None:intergenic
TTGTAGAAGTGAAATCAGAT+GGG 0.624691 tig0027224:+23562 Msa1433060:CDS
TCCACGGGACGTTAGAAGTG+TGG 0.625060 tig0027224:+24197 Msa1433060:CDS
TTTACATAAGAACTGCATGA+AGG 0.625107 tig0027224:+29901 Msa1433060:three_prime_UTR
TCCACACTTCTAACGTCCCG+TGG 0.632114 tig0027224:-24198 None:intergenic
AAATTCAGAAGTGGCGACGG+TGG 0.632676 tig0027224:-22946 None:intergenic
TTCATCGGAATCAGACGCGA+CGG 0.634341 tig0027224:-23193 None:intergenic
GCTGTTGATGATGAATCAAA+CGG 0.636421 tig0027224:+23216 Msa1433060:CDS
TGCAGATGTGAATCTTGTCA+CGG 0.638670 tig0027224:+27664 Msa1433060:intron
AACCCCAAGAGCAACAATGG+AGG 0.639651 tig0027224:+24843 Msa1433060:CDS
CGATAGAGAATCTCCAGAAG+AGG 0.640168 tig0027224:-23289 None:intergenic
GGCGACGGTGGAGGTTACGG+TGG 0.641123 tig0027224:-22934 None:intergenic
TAGAGAATCTCCAGAAGAGG+TGG 0.641979 tig0027224:-23286 None:intergenic
ACGGAGGCTTGAAGTTAGCA+GGG 0.650280 tig0027224:+28231 Msa1433060:CDS
CTTCTTCAATAGAGTCTCCG+AGG 0.650707 tig0027224:+23256 Msa1433060:CDS
GGTGAAATGCAGTAGATCCA+CGG 0.652611 tig0027224:+23137 Msa1433060:CDS
TTGCTCTTGGGGTTTAACCG+AGG 0.658451 tig0027224:-24834 None:intergenic
GATCCACGGAAGAAAAGCCG+TGG 0.662772 tig0027224:+23151 Msa1433060:CDS
CCAGGTTGGAACATTCTGTG+TGG 0.669557 tig0027224:+28267 Msa1433060:CDS
GCAGAAGGCCAAGAAAAGTG+TGG 0.677081 tig0027224:+25643 Msa1433060:CDS
TTAGAAGTATAGCATACTCA+CGG 0.677451 tig0027224:-24600 None:intergenic
GTCCTATCTTGAGGAACGTG+TGG 0.678140 tig0027224:+28906 Msa1433060:CDS
TTCCATTCAACAGCTCACGG+AGG 0.732721 tig0027224:+28215 Msa1433060:intron
TGTGTTTCCATACTCACACG+AGG 0.733801 tig0027224:-26050 None:intergenic
GAGGCTTGAAGTTAGCAGGG+TGG 0.735608 tig0027224:+28234 Msa1433060:CDS
CTTACCAAATCGGATAACTG+GGG 0.745411 tig0027224:+26787 Msa1433060:CDS
AGGACCCAGATGAAATACGG+AGG 0.746792 tig0027224:+26989 Msa1433060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATAATTTTATTTTGAT+TGG + tig0027224:24003-24022 Msa1433060:intron 10.0%
!! TACTTATATTTGATTATAAT+CGG + tig0027224:24662-24681 Msa1433060:CDS 10.0%
!!! AAAAAATGATTTTAAGATTA+TGG + tig0027224:26356-26375 Msa1433060:intron 10.0%
!! AATATTATACTATTATACTA+TGG - tig0027224:27987-28006 None:intergenic 10.0%
!! TGAATAATTTAAATTAAGTT+TGG - tig0027224:28383-28402 None:intergenic 10.0%
!!! TATTATTTGATGGATTTTAT+AGG - tig0027224:22814-22833 None:intergenic 15.0%
!! AATAATAAAAAAACCAAATC+CGG + tig0027224:22833-22852 Msa1433060:five_prime_UTR 15.0%
!! ACATTGTGATTATTATATTT+GGG - tig0027224:23885-23904 None:intergenic 15.0%
!! AACATTGTGATTATTATATT+TGG - tig0027224:23886-23905 None:intergenic 15.0%
!! CTGAAATAATTCATATATTA+TGG + tig0027224:24697-24716 Msa1433060:intron 15.0%
!! ACAAAAGAAAAATTTGAAAA+TGG + tig0027224:25070-25089 Msa1433060:intron 15.0%
!! AATAAAAACTTATTTGAACA+CGG + tig0027224:25322-25341 Msa1433060:intron 15.0%
!!! TCATTCATAATTTTATTTTG+AGG + tig0027224:25424-25443 Msa1433060:intron 15.0%
!!! CATTCATAATTTTATTTTGA+GGG + tig0027224:25425-25444 Msa1433060:intron 15.0%
!!! TTCAGTTTTTTTTTTAAAGA+GGG - tig0027224:25787-25806 None:intergenic 15.0%
!!! ATTACATATTTTTATTAGCA+TGG + tig0027224:26315-26334 Msa1433060:intron 15.0%
!!! TTCAACTTTATTTTTTTACA+AGG + tig0027224:26486-26505 Msa1433060:intron 15.0%
!!! TACTCTAAAATATTTCAATA+AGG - tig0027224:26634-26653 None:intergenic 15.0%
!! AGAAATTGTACAATAAATAA+AGG + tig0027224:27027-27046 Msa1433060:CDS 15.0%
!! GTATAATATTATTACATTCA+AGG + tig0027224:27997-28016 Msa1433060:intron 15.0%
!! TTAAGTTTGGTTAAAATTAT+GGG - tig0027224:28370-28389 None:intergenic 15.0%
!! ATTAAGTTTGGTTAAAATTA+TGG - tig0027224:28371-28390 None:intergenic 15.0%
!!! GTTAATTATAAATTTGTTAG+TGG + tig0027224:28474-28493 Msa1433060:intron 15.0%
!! AATAAAAATACATTAAGAAG+AGG - tig0027224:29197-29216 None:intergenic 15.0%
!! ATCTATTCATCTTATTATTT+AGG - tig0027224:29311-29330 None:intergenic 15.0%
!!! AATTATTTAATTTCTTCGTA+AGG - tig0027224:30046-30065 None:intergenic 15.0%
!! AAATGCATGAATAATTTATC+CGG - tig0027224:22855-22874 None:intergenic 20.0%
!! TACTATATGAAATTATGTTG+TGG + tig0027224:23369-23388 Msa1433060:intron 20.0%
!! CAAAATACTCAATTCAAAAT+AGG + tig0027224:23946-23965 Msa1433060:intron 20.0%
!! ATGATATAAATATGTTAGCA+GGG - tig0027224:24131-24150 None:intergenic 20.0%
!! AATGATATAAATATGTTAGC+AGG - tig0027224:24132-24151 None:intergenic 20.0%
!! TATCATTTCTTAATACCTTA+TGG + tig0027224:24281-24300 Msa1433060:intron 20.0%
!! TCAATAATTAGCGTATTAAA+TGG - tig0027224:24914-24933 None:intergenic 20.0%
!!! TTATGACAATATGTTGATTT+TGG + tig0027224:25033-25052 Msa1433060:intron 20.0%
!! TATACTTAAGTATGCATTTA+TGG + tig0027224:25477-25496 Msa1433060:intron 20.0%
!!! CTTCAGTTTTTTTTTTAAAG+AGG - tig0027224:25788-25807 None:intergenic 20.0%
!!! CTCTTTAAAAAAAAAACTGA+AGG + tig0027224:25786-25805 Msa1433060:intron 20.0%
!! CAAAAACTGGTAAAAATTTA+TGG + tig0027224:26193-26212 Msa1433060:intron 20.0%
!!! TTCTAATTTTCTTAAGATCT+TGG - tig0027224:26517-26536 None:intergenic 20.0%
!!! TGAAAGATTACTTTTACTTA+GGG - tig0027224:26554-26573 None:intergenic 20.0%
!!! ATGAAAGATTACTTTTACTT+AGG - tig0027224:26555-26574 None:intergenic 20.0%
!!! TCTAAAATATTTCAATAAGG+AGG - tig0027224:26631-26650 None:intergenic 20.0%
!! TTAAACTCTTGCAATTAAAA+TGG + tig0027224:28053-28072 Msa1433060:intron 20.0%
!! CAAAGTTATTAGAACAAATA+AGG - tig0027224:28194-28213 None:intergenic 20.0%
!! CTTATTTGTTCTAATAACTT+TGG + tig0027224:28192-28211 Msa1433060:intron 20.0%
!!! TTATAAATTTGTTAGTGGTT+TGG + tig0027224:28479-28498 Msa1433060:intron 20.0%
!!! AGAATATTTTGATATAGATC+AGG - tig0027224:28851-28870 None:intergenic 20.0%
!! AAATATTCTTTCATGATTTC+AGG + tig0027224:28862-28881 Msa1433060:intron 20.0%
!! TGTTAAATTAACCATATTTG+TGG + tig0027224:29002-29021 Msa1433060:intron 20.0%
!! ACTTAATCTATAAACAATTC+AGG + tig0027224:29427-29446 Msa1433060:intron 20.0%
!!! CAGGTTATTTTAAAATATGA+AGG + tig0027224:29581-29600 Msa1433060:intron 20.0%
!!! TTCACTTTAGTTGATAATAT+TGG + tig0027224:29946-29965 Msa1433060:three_prime_UTR 20.0%
! ATGAATAATTTATCCGGATT+TGG - tig0027224:22849-22868 None:intergenic 25.0%
! ATGTTAGTTAAATTCAGAAG+TGG - tig0027224:22958-22977 None:intergenic 25.0%
! ACTTCTGAATTTAACTAACA+TGG + tig0027224:22957-22976 Msa1433060:exon 25.0%
! GAAGATAAAACTAATTAAGC+AGG + tig0027224:23451-23470 Msa1433060:intron 25.0%
! ATAAAATAGAAGACTACATG+AGG - tig0027224:24042-24061 None:intergenic 25.0%
! TCGTAAAAAATAAAAGCAGA+TGG - tig0027224:24083-24102 None:intergenic 25.0%
! GAATTTGTCAAAAACAATGA+TGG - tig0027224:24225-24244 None:intergenic 25.0%
! GTATTAAGAAATGATAGAGT+GGG - tig0027224:24277-24296 None:intergenic 25.0%
! CATTGTTTATAAGTACCATA+AGG - tig0027224:24299-24318 None:intergenic 25.0%
! CTTATGGTACTTATAAACAA+TGG + tig0027224:24297-24316 Msa1433060:intron 25.0%
!! TTTTATTAGCAGCATAACAT+AGG - tig0027224:24451-24470 None:intergenic 25.0%
!! TTAATTTTATGAGTGTGGAT+TGG - tig0027224:24480-24499 None:intergenic 25.0%
!! GTAGATTAATTTTATGAGTG+TGG - tig0027224:24485-24504 None:intergenic 25.0%
! TATGCTATACTTCTAAACTT+GGG + tig0027224:24607-24626 Msa1433060:CDS 25.0%
!!! TATTGATTTTTCACCAGTAA+AGG + tig0027224:24783-24802 Msa1433060:intron 25.0%
! AATACGCTAATTATTGAATC+AGG + tig0027224:24917-24936 Msa1433060:intron 25.0%
! ATACGCTAATTATTGAATCA+GGG + tig0027224:24918-24937 Msa1433060:intron 25.0%
!! AAATTTTTCTTTTGTCAGAC+AGG - tig0027224:25065-25084 None:intergenic 25.0%
!! TTGAAAATGGTTTCTTTTCA+AGG + tig0027224:25083-25102 Msa1433060:intron 25.0%
!! TGAAAATGGTTTCTTTTCAA+GGG + tig0027224:25084-25103 Msa1433060:intron 25.0%
!! TTTTGTCTCATTAGAACAAA+TGG - tig0027224:25170-25189 None:intergenic 25.0%
!!! TAATTTTATTTTGAGGGATG+AGG + tig0027224:25431-25450 Msa1433060:intron 25.0%
! TTCCTATATACTTTCTCTAA+TGG - tig0027224:25689-25708 None:intergenic 25.0%
!! CCAAAAATCATAACCATTTT+GGG - tig0027224:25712-25731 None:intergenic 25.0%
!! CCAAAATGGTTATGATTTTT+GGG + tig0027224:25710-25729 Msa1433060:intron 25.0%
!! CAAAATGGTTATGATTTTTG+GGG + tig0027224:25711-25730 Msa1433060:intron 25.0%
!!! GAGTAGATTTTCAAGTAATT+GGG + tig0027224:25733-25752 Msa1433060:intron 25.0%
!!! AGTAGATTTTCAAGTAATTG+GGG + tig0027224:25734-25753 Msa1433060:intron 25.0%
!! TGTTCTCATTTTGTATGTTA+GGG + tig0027224:25872-25891 Msa1433060:intron 25.0%
! AAATTCAACCATGGTAATTA+GGG - tig0027224:25963-25982 None:intergenic 25.0%
! AAAATTCAACCATGGTAATT+AGG - tig0027224:25964-25983 None:intergenic 25.0%
! ATGTTTATGTTCATTCTTTG+TGG + tig0027224:26087-26106 Msa1433060:intron 25.0%
! ATTATAAATGCATTTCACGA+TGG + tig0027224:26289-26308 Msa1433060:intron 25.0%
!!! GTGTTTTTTTTTTAGAGCTT+TGG + tig0027224:26384-26403 Msa1433060:intron 25.0%
!!! AAAGATTACTTTTACTTAGG+GGG - tig0027224:26552-26571 None:intergenic 25.0%
!!! GAAAGATTACTTTTACTTAG+GGG - tig0027224:26553-26572 None:intergenic 25.0%
! GAGAAAAGTTATTCAAATCA+GGG - tig0027224:26725-26744 None:intergenic 25.0%
! AGAGAAAAGTTATTCAAATC+AGG - tig0027224:26726-26745 None:intergenic 25.0%
!! TTTTTCTCATTAATCTTCAG+CGG + tig0027224:26863-26882 Msa1433060:intron 25.0%
! AAATAAAGGAAACCATAATG+TGG + tig0027224:27041-27060 Msa1433060:CDS 25.0%
!!! TTTTTTCTCATGATATGTAG+AGG + tig0027224:27182-27201 Msa1433060:intron 25.0%
! TTTGACAAAGTATGTGAAAT+AGG + tig0027224:28331-28350 Msa1433060:intron 25.0%
! AAATTATTCACAATCTAGTC+TGG + tig0027224:28393-28412 Msa1433060:intron 25.0%
! GTTTAATATACTTTCCATGA+AGG + tig0027224:28671-28690 Msa1433060:intron 25.0%
!! TGTGGAAAAATATGAACTTT+TGG + tig0027224:28744-28763 Msa1433060:intron 25.0%
!! ATTTAATGCAGTTTGCATTT+TGG + tig0027224:29025-29044 Msa1433060:intron 25.0%
! AAAAATACATTAAGAAGAGG+AGG - tig0027224:29194-29213 None:intergenic 25.0%
!! ATTTAAAGTAAGCTTTCAAG+TGG + tig0027224:29389-29408 Msa1433060:intron 25.0%
!! TGTATGATCAAGTGATTTTT+AGG + tig0027224:29972-29991 Msa1433060:three_prime_UTR 25.0%
!! GTATGATCAAGTGATTTTTA+GGG + tig0027224:29973-29992 Msa1433060:three_prime_UTR 25.0%
!! TTTAATTTCTTCGTAAGGAT+TGG - tig0027224:30041-30060 None:intergenic 25.0%
! GATTTACACCATAATAAAAC+AGG + tig0027224:30070-30089 Msa1433060:three_prime_UTR 25.0%
! TCTATTGAAGAAGTTTTGCT+CGG - tig0027224:23249-23268 None:intergenic 30.0%
ATAGAACGAACTTCATAAAC+AGG - tig0027224:23330-23349 None:intergenic 30.0%
GTTCAATGAACTAAAACCAT+AGG + tig0027224:23423-23442 Msa1433060:intron 30.0%
TGAACTAAAACCATAGGATT+AGG + tig0027224:23429-23448 Msa1433060:intron 30.0%
! GTTTTATCTTCCTAATCCTA+TGG - tig0027224:23442-23461 None:intergenic 30.0%
TCTAAATTTGTGAATCGTGA+AGG + tig0027224:23539-23558 Msa1433060:intron 30.0%
TTGTAGAAGTGAAATCAGAT+GGG + tig0027224:23562-23581 Msa1433060:CDS 30.0%
AGACAATTATTGAAGTCTAG+TGG + tig0027224:23612-23631 Msa1433060:CDS 30.0%
GAGCTTATGAAAAGAACATA+TGG - tig0027224:23861-23880 None:intergenic 30.0%
AGATATTATACCAGCAAAGA+AGG - tig0027224:24252-24271 None:intergenic 30.0%
GGTATTAAGAAATGATAGAG+TGG - tig0027224:24278-24297 None:intergenic 30.0%
! TTAGAAGTATAGCATACTCA+CGG - tig0027224:24603-24622 None:intergenic 30.0%
GTATGCTATACTTCTAAACT+TGG + tig0027224:24606-24625 Msa1433060:CDS 30.0%
!! TGTCGTTATTTCTGTGATAA+AGG + tig0027224:24730-24749 Msa1433060:intron 30.0%
!! GTCGTTATTTCTGTGATAAA+GGG + tig0027224:24731-24750 Msa1433060:intron 30.0%
!! TCGTTATTTCTGTGATAAAG+GGG + tig0027224:24732-24751 Msa1433060:intron 30.0%
TACTGGTGAAAAATCAATAG+AGG - tig0027224:24782-24801 None:intergenic 30.0%
TACGCTAATTATTGAATCAG+GGG + tig0027224:24919-24938 Msa1433060:intron 30.0%
GATATAGCAGAAAATGAGTT+AGG - tig0027224:25012-25031 None:intergenic 30.0%
!! TACTGCTATTAAGTTGATTC+AGG - tig0027224:25135-25154 None:intergenic 30.0%
GAAATATGATAGTTACACTC+AGG + tig0027224:25361-25380 Msa1433060:intron 30.0%
! TGCCATTAGAGAAAGTATAT+AGG + tig0027224:25684-25703 Msa1433060:intron 30.0%
AAGTATATAGGAACCCAAAA+TGG + tig0027224:25696-25715 Msa1433060:intron 30.0%
! CCCAAAATGGTTATGATTTT+TGG + tig0027224:25709-25728 Msa1433060:intron 30.0%
! CCCAAAAATCATAACCATTT+TGG - tig0027224:25713-25732 None:intergenic 30.0%
!!! GGAGTAGATTTTCAAGTAAT+TGG + tig0027224:25732-25751 Msa1433060:intron 30.0%
CTAACATTTATATGACCAGT+TGG + tig0027224:25831-25850 Msa1433060:intron 30.0%
! GTGTTCTCATTTTGTATGTT+AGG + tig0027224:25871-25890 Msa1433060:intron 30.0%
AATTCAACCATGGTAATTAG+GGG - tig0027224:25962-25981 None:intergenic 30.0%
! ATTACCATGGTTGAATTTTC+AGG + tig0027224:25965-25984 Msa1433060:intron 30.0%
AATTTGCCTATTTGTTCCTA+TGG + tig0027224:26134-26153 Msa1433060:intron 30.0%
!!! CATAGAAGCTATTTTTCATG+TGG + tig0027224:26407-26426 Msa1433060:intron 30.0%
!! AAGATTACTTTTACTTAGGG+GGG - tig0027224:26551-26570 None:intergenic 30.0%
TTTCTATAGCATATGTCTAG+TGG + tig0027224:26599-26618 Msa1433060:intron 30.0%
TATAATCTGTTATGAACCGA+AGG - tig0027224:26670-26689 None:intergenic 30.0%
TCGTATTAGCAAACAAACTT+TGG + tig0027224:26826-26845 Msa1433060:CDS 30.0%
AATACGGAGGATATGTATTA+TGG + tig0027224:27002-27021 Msa1433060:CDS 30.0%
ATACGGAGGATATGTATTAT+GGG + tig0027224:27003-27022 Msa1433060:CDS 30.0%
! TTCTGGAAAATTATCTCCAA+AGG + tig0027224:27226-27245 Msa1433060:CDS 30.0%
! TTTGGAATGAGAATAACCTT+TGG - tig0027224:27245-27264 None:intergenic 30.0%
TGATACGTAATGCACAAATT+TGG - tig0027224:27263-27282 None:intergenic 30.0%
! TAATAGTCAAAGCACTAACA+TGG + tig0027224:27397-27416 Msa1433060:intron 30.0%
AAGTAAAGGCTTAAGATTCT+TGG - tig0027224:27445-27464 None:intergenic 30.0%
AGGATGTTAATGGTAAGTAA+AGG - tig0027224:27459-27478 None:intergenic 30.0%
ATTCTATAGCTGTCAGTTTA+AGG + tig0027224:27728-27747 Msa1433060:CDS 30.0%
AGAATTGTATCAAGTGATTG+TGG + tig0027224:27791-27810 Msa1433060:intron 30.0%
! GAATCACATGATTTGATGAT+AGG + tig0027224:27829-27848 Msa1433060:intron 30.0%
TCCATTGTGAAGTCAAATTA+AGG + tig0027224:27920-27939 Msa1433060:intron 30.0%
! TCCTTAATTTGACTTCACAA+TGG - tig0027224:27924-27943 None:intergenic 30.0%
AAAGCTAAGCTAATGAACTA+TGG - tig0027224:28117-28136 None:intergenic 30.0%
ACAAATTTCTCTTTGCATTG+AGG - tig0027224:28142-28161 None:intergenic 30.0%
AAAATATGTACCTGCTACAA+GGG - tig0027224:28302-28321 None:intergenic 30.0%
! TTGTAGCAGGTACATATTTT+GGG + tig0027224:28302-28321 Msa1433060:intron 30.0%
GTTTGGTTAAAATTATGGGT+GGG - tig0027224:28366-28385 None:intergenic 30.0%
AGTTTGGTTAAAATTATGGG+TGG - tig0027224:28367-28386 None:intergenic 30.0%
TCACATACCAGTAATTAAAG+TGG + tig0027224:28440-28459 Msa1433060:intron 30.0%
TTTGAGTCCACTTTAATTAC+TGG - tig0027224:28450-28469 None:intergenic 30.0%
! AATTAAAGTGGACTCAAACT+TGG + tig0027224:28452-28471 Msa1433060:intron 30.0%
!! AAATTTGTTAGTGGTTTGGA+TGG + tig0027224:28483-28502 Msa1433060:intron 30.0%
!!! AGATTTTAAGAAGTGCTGTA+GGG - tig0027224:28521-28540 None:intergenic 30.0%
!!! TAGATTTTAAGAAGTGCTGT+AGG - tig0027224:28522-28541 None:intergenic 30.0%
TAACAAATGAACATGTACCT+AGG - tig0027224:28611-28630 None:intergenic 30.0%
! ATTTGCTACTACCATCATAA+TGG + tig0027224:28636-28655 Msa1433060:intron 30.0%
ACAAAATTCTGCCATTATGA+TGG - tig0027224:28650-28669 None:intergenic 30.0%
!! TAGATCTTTAAAGTCCTTCA+TGG - tig0027224:28688-28707 None:intergenic 30.0%
! GACTTTAAAGATCTAGAATC+TGG + tig0027224:28693-28712 Msa1433060:intron 30.0%
TAATATTCTCTCAATCTCTC+AGG - tig0027224:28821-28840 None:intergenic 30.0%
TTCATGATTTCAGGCATATT+TGG + tig0027224:28871-28890 Msa1433060:intron 30.0%
TATTCCATCTATGACTTACT+TGG + tig0027224:28949-28968 Msa1433060:intron 30.0%
!! ATGACTTACTTGGTTCTTTT+TGG + tig0027224:28959-28978 Msa1433060:intron 30.0%
!! TGGTTCTTTTTGGAAGTTAT+TGG + tig0027224:28969-28988 Msa1433060:intron 30.0%
CTGCATTAAATCCACAAATA+TGG - tig0027224:29016-29035 None:intergenic 30.0%
! AAAATATTTTCCTTGCTCTG+AGG - tig0027224:29110-29129 None:intergenic 30.0%
TCAGACGAAACTTCAAATAT+AGG + tig0027224:29132-29151 Msa1433060:three_prime_UTR 30.0%
TTAGAAGTAGAGGTCAAAAT+AGG - tig0027224:29484-29503 None:intergenic 30.0%
!!! TATTTTGACCTCTACTTCTA+AGG + tig0027224:29483-29502 Msa1433060:intron 30.0%
! AGCTTTTATTCTTATTCCAG+AGG + tig0027224:29717-29736 Msa1433060:intron 30.0%
! GCTTTTATTCTTATTCCAGA+GGG + tig0027224:29718-29737 Msa1433060:intron 30.0%
! CTTTTATTCTTATTCCAGAG+GGG + tig0027224:29719-29738 Msa1433060:intron 30.0%
! TTTTATTCTTATTCCAGAGG+GGG + tig0027224:29720-29739 Msa1433060:intron 30.0%
!!! TCAATTTTTTACTGCTTCAC+AGG + tig0027224:29753-29772 Msa1433060:intron 30.0%
TTTACATAAGAACTGCATGA+AGG + tig0027224:29901-29920 Msa1433060:three_prime_UTR 30.0%
ACCATAATAAAACAGGTATC+TGG + tig0027224:30077-30096 Msa1433060:three_prime_UTR 30.0%
! AGGTTTTACCCAACAATTAA+TGG - tig0027224:30105-30124 None:intergenic 30.0%
TTCAAACTTTCACAAGAACT+CGG - tig0027224:30129-30148 None:intergenic 30.0%
TCTTGTGAAAGTTTGAATGA+TGG + tig0027224:30132-30151 Msa1433060:three_prime_UTR 30.0%
TTCATCATCAACAGCTTCAT+CGG - tig0027224:23211-23230 None:intergenic 35.0%
!! GCTGTTGATGATGAATCAAA+CGG + tig0027224:23216-23235 Msa1433060:CDS 35.0%
GTTGTAGAAGTGAAATCAGA+TGG + tig0027224:23561-23580 Msa1433060:CDS 35.0%
! ATAAGCGCTCAATTAAGTTG+TGG - tig0027224:23695-23714 None:intergenic 35.0%
AATAGAAGACTACATGAGGT+AGG - tig0027224:24038-24057 None:intergenic 35.0%
TGATGAGCGTTCAATTATTC+AGG + tig0027224:24168-24187 Msa1433060:intron 35.0%
AAATTCAATGCCTTCTTTGC+TGG + tig0027224:24239-24258 Msa1433060:CDS 35.0%
ATACTACAAAGAGCAGTCTA+TGG - tig0027224:24346-24365 None:intergenic 35.0%
CAGTCTATCAACTATCATGA+AGG + tig0027224:24397-24416 Msa1433060:intron 35.0%
GCAAGGAAATCGAATCATTA+GGG - tig0027224:24568-24587 None:intergenic 35.0%
AGCAAGGAAATCGAATCATT+AGG - tig0027224:24569-24588 None:intergenic 35.0%
CGATTTCCTTGCTTTGTATT+AGG + tig0027224:24576-24595 Msa1433060:intron 35.0%
! TGATTTTTCACCAGTAAAGG+AGG + tig0027224:24786-24805 Msa1433060:intron 35.0%
! GATTTTTCACCAGTAAAGGA+GGG + tig0027224:24787-24806 Msa1433060:intron 35.0%
! TCGATTTCAAATGGCATTGA+TGG - tig0027224:24870-24889 None:intergenic 35.0%
! ATCAATGCCATTTGAAATCG+AGG + tig0027224:24869-24888 Msa1433060:CDS 35.0%
ACGCTAATTATTGAATCAGG+GGG + tig0027224:24920-24939 Msa1433060:intron 35.0%
ACTTTACCTTTCCAAACCTT+GGG - tig0027224:25503-25522 None:intergenic 35.0%
AACTTTACCTTTCCAAACCT+TGG - tig0027224:25504-25523 None:intergenic 35.0%
AAGGTTTGGAAAGGTAAAGT+TGG + tig0027224:25503-25522 Msa1433060:intron 35.0%
!!! TTTTAAGGCCACACTTTTCT+TGG - tig0027224:25654-25673 None:intergenic 35.0%
!! TAAAGAGGGTATTAACCACA+GGG - tig0027224:25773-25792 None:intergenic 35.0%
!! TTAAAGAGGGTATTAACCAC+AGG - tig0027224:25774-25793 None:intergenic 35.0%
ATTCAACCATGGTAATTAGG+GGG - tig0027224:25961-25980 None:intergenic 35.0%
ACAACCTGAAAATTCAACCA+TGG - tig0027224:25972-25991 None:intergenic 35.0%
GCTTTCAAGAATACAACGTT+TGG + tig0027224:26004-26023 Msa1433060:CDS 35.0%
TCAAAGCCATAGGAACAAAT+AGG - tig0027224:26143-26162 None:intergenic 35.0%
CAACTACATATCAAAGCCAT+AGG - tig0027224:26153-26172 None:intergenic 35.0%
GATCTTATAGAATGTCGACA+TGG - tig0027224:26261-26280 None:intergenic 35.0%
ATGAAAAAGCTGAACTCAAC+TGG + tig0027224:26573-26592 Msa1433060:intron 35.0%
!!! GTAGACTGATTTTTTGCCTT+CGG + tig0027224:26651-26670 Msa1433060:intron 35.0%
AAGTTATTCAAATCAGGGAC+AGG - tig0027224:26720-26739 None:intergenic 35.0%
ATATCCTCCGTATTTCATCT+GGG - tig0027224:26996-27015 None:intergenic 35.0%
TTTCTCATGATATGTAGAGG+AGG + tig0027224:27185-27204 Msa1433060:intron 35.0%
TCCTCAACATGACATAAGAA+AGG - tig0027224:27374-27393 None:intergenic 35.0%
TTCTTATGTCATGTTGAGGA+AGG + tig0027224:27374-27393 Msa1433060:intron 35.0%
TCTTAATGCAGATTCCTTTC+AGG - tig0027224:27509-27528 None:intergenic 35.0%
! GCTAACCATGGAATTGTTTT+TGG + tig0027224:27882-27901 Msa1433060:intron 35.0%
ACAGTCCAAAAACAATTCCA+TGG - tig0027224:27890-27909 None:intergenic 35.0%
ATTAAGGAATTAACCCTTCG+TGG + tig0027224:27936-27955 Msa1433060:intron 35.0%
ATGGTGTTTGAGTATATGCA+CGG - tig0027224:28098-28117 None:intergenic 35.0%
CAAAATATGTACCTGCTACA+AGG - tig0027224:28303-28322 None:intergenic 35.0%
! CTTGTAGCAGGTACATATTT+TGG + tig0027224:28301-28320 Msa1433060:intron 35.0%
!!! GATTTTAAGAAGTGCTGTAG+GGG - tig0027224:28520-28539 None:intergenic 35.0%
AGTTCCTTTCGAGATCAAAT+TGG - tig0027224:28724-28743 None:intergenic 35.0%
!!! AATATGAACTTTTGGCTCTG+TGG + tig0027224:28752-28771 Msa1433060:intron 35.0%
AGAACCAAGTAAGTCATAGA+TGG - tig0027224:28956-28975 None:intergenic 35.0%
! ACCACATCTGGGATTATTAT+TGG + tig0027224:29051-29070 Msa1433060:CDS 35.0%
ACCAATAATAATCCCAGATG+TGG - tig0027224:29055-29074 None:intergenic 35.0%
! ACATCTGGGATTATTATTGG+TGG + tig0027224:29054-29073 Msa1433060:CDS 35.0%
!! TAGGTAAGTTTGTTACCTTC+TGG + tig0027224:29151-29170 Msa1433060:intron 35.0%
TCTATAAACAATTCAGGCTC+AGG + tig0027224:29433-29452 Msa1433060:intron 35.0%
AGGTCAAAATAGGTTACGTA+TGG - tig0027224:29474-29493 None:intergenic 35.0%
TGACTAAACCTTAGAAGTAG+AGG - tig0027224:29494-29513 None:intergenic 35.0%
AAATGAATCAGAATCCCTTC+AGG - tig0027224:29559-29578 None:intergenic 35.0%
!! GGGATTCTGATTCATTTTTC+AGG + tig0027224:29562-29581 Msa1433060:intron 35.0%
TGTGCACAAAGATCAATCTA+CGG + tig0027224:29631-29650 Msa1433060:three_prime_UTR 35.0%
CAAAGATCAATCTACGGAAA+TGG + tig0027224:29637-29656 Msa1433060:three_prime_UTR 35.0%
! TCAATCTACGGAAATGGATT+TGG + tig0027224:29643-29662 Msa1433060:three_prime_UTR 35.0%
TTTATTCTTATTCCAGAGGG+GGG + tig0027224:29721-29740 Msa1433060:intron 35.0%
!!! TCACACTGTTTTTAGTGTCA+AGG + tig0027224:29873-29892 Msa1433060:three_prime_UTR 35.0%
!! TGATCAAGTGATTTTTAGGG+TGG + tig0027224:29976-29995 Msa1433060:three_prime_UTR 35.0%
!! GCCAGATACCTGTTTTATTA+TGG - tig0027224:30081-30100 None:intergenic 35.0%
! TATCTGGCTCCATTAATTGT+TGG + tig0027224:30093-30112 Msa1433060:three_prime_UTR 35.0%
! ATCTGGCTCCATTAATTGTT+GGG + tig0027224:30094-30113 Msa1433060:three_prime_UTR 35.0%
GTTAAATTCAGAAGTGGCGA+CGG - tig0027224:22952-22971 None:intergenic 40.0%
AGATTCGTGGAATTGTGGTT+CGG - tig0027224:23061-23080 None:intergenic 40.0%
!! ATGTAACGGAGATTTTGCTC+CGG - tig0027224:23098-23117 None:intergenic 40.0%
ATTATTCAGGTCTTCGTCCA+CGG + tig0027224:24181-24200 Msa1433060:intron 40.0%
!!! CACACACACCAGTTTTGTTT+CGG + tig0027224:24513-24532 Msa1433060:intron 40.0%
!!! ACACACACCAGTTTTGTTTC+GGG + tig0027224:24514-24533 Msa1433060:intron 40.0%
GTGTATTCCCGAAACAAAAC+TGG - tig0027224:24524-24543 None:intergenic 40.0%
TTAAACCCCAAGAGCAACAA+TGG + tig0027224:24840-24859 Msa1433060:CDS 40.0%
CAACAGACCTCGATTTCAAA+TGG - tig0027224:24879-24898 None:intergenic 40.0%
! CATTTGAAATCGAGGTCTGT+TGG + tig0027224:24877-24896 Msa1433060:intron 40.0%
TTAGTGAACCAGACTATGCT+TGG - tig0027224:24979-24998 None:intergenic 40.0%
GAGATATGATAGTTAGACCC+AGG + tig0027224:25227-25246 Msa1433060:intron 40.0%
! TACTGCTACTCAGTTGTTTC+AGG - tig0027224:25253-25272 None:intergenic 40.0%
AAGTATGCATTTATGGCCCA+AGG + tig0027224:25484-25503 Msa1433060:intron 40.0%
GTTTGGAAAGGTAAAGTTGG+TGG + tig0027224:25506-25525 Msa1433060:intron 40.0%
GGTAACAATTCCATTGCAGA+AGG + tig0027224:25628-25647 Msa1433060:CDS 40.0%
! TGTGGCCTTAAAAGTAAGTC+AGG + tig0027224:25661-25680 Msa1433060:intron 40.0%
!! TGGCACCTGACTTACTTTTA+AGG - tig0027224:25669-25688 None:intergenic 40.0%
ATATGACCAGTTGGTTACCA+TGG + tig0027224:25840-25859 Msa1433060:intron 40.0%
TATGACCAGTTGGTTACCAT+GGG + tig0027224:25841-25860 Msa1433060:intron 40.0%
GATGACATTGACAAGCAAGA+TGG - tig0027224:25905-25924 None:intergenic 40.0%
CTTGCTTGTCAATGTCATCA+TGG + tig0027224:25906-25925 Msa1433060:intron 40.0%
CAAGAATACAACGTTTGGAG+CGG + tig0027224:26009-26028 Msa1433060:CDS 40.0%
ACCTGTACATGAGCAAAAAC+TGG + tig0027224:26180-26199 Msa1433060:intron 40.0%
! ACCAGTTTTTGCTCATGTAC+AGG - tig0027224:26184-26203 None:intergenic 40.0%
AGGATTCAGAGACAGGAAAA+GGG - tig0027224:26700-26719 None:intergenic 40.0%
TCAAGAAGAGCTTGAACCTA+GGG - tig0027224:26764-26783 None:intergenic 40.0%
TTCTTGAGGCCTTACCAAAT+CGG + tig0027224:26777-26796 Msa1433060:CDS 40.0%
CCTTACCAAATCGGATAACT+GGG + tig0027224:26786-26805 Msa1433060:CDS 40.0%
CTTACCAAATCGGATAACTG+GGG + tig0027224:26787-26806 Msa1433060:CDS 40.0%
ATATCCCCAGTTATCCGATT+TGG - tig0027224:26794-26813 None:intergenic 40.0%
CCTAACTCAACCTAGCAATT+TGG - tig0027224:26925-26944 None:intergenic 40.0%
! CCAAATTGCTAGGTTGAGTT+AGG + tig0027224:26922-26941 Msa1433060:intron 40.0%
CATATCCTCCGTATTTCATC+TGG - tig0027224:26997-27016 None:intergenic 40.0%
! TTTTGTGTGCTCATGTGTTG+AGG + tig0027224:27294-27313 Msa1433060:intron 40.0%
AACAGTGTTGTATGCCTTCA+CGG + tig0027224:27348-27367 Msa1433060:intron 40.0%
GCCTTTCTTATGTCATGTTG+AGG + tig0027224:27370-27389 Msa1433060:intron 40.0%
! TAGTCAAAGCACTAACATGG+TGG + tig0027224:27400-27419 Msa1433060:intron 40.0%
GAGAGCTTTCAGGATGTTAA+TGG - tig0027224:27469-27488 None:intergenic 40.0%
ACATGGATAAGAGAGCTTTC+AGG - tig0027224:27479-27498 None:intergenic 40.0%
TCCATGTTGCAATACCTGAA+AGG + tig0027224:27492-27511 Msa1433060:intron 40.0%
! TCCTTTCAGGTATTGCAACA+TGG - tig0027224:27496-27515 None:intergenic 40.0%
TGCAGATGTGAATCTTGTCA+CGG + tig0027224:27664-27683 Msa1433060:intron 40.0%
AAAGGCTTCTTGATTCTGCA+AGG + tig0027224:27695-27714 Msa1433060:CDS 40.0%
AAGGCTTCTTGATTCTGCAA+GGG + tig0027224:27696-27715 Msa1433060:CDS 40.0%
TCTTGATTCTGCAAGGGAAA+TGG + tig0027224:27702-27721 Msa1433060:CDS 40.0%
!!! TGTTTTTGGACTGTCATCCT+TGG + tig0027224:27896-27915 Msa1433060:intron 40.0%
TTGACTTCACAATGGAACCA+AGG - tig0027224:27916-27935 None:intergenic 40.0%
TGACAATATGTGACCACGAA+GGG - tig0027224:27952-27971 None:intergenic 40.0%
ATGACAATATGTGACCACGA+AGG - tig0027224:27953-27972 None:intergenic 40.0%
CACGGAGTTAGATTCTTAGA+TGG - tig0027224:28080-28099 None:intergenic 40.0%
TTACTGATGACAGAGAGCTA+TGG - tig0027224:28171-28190 None:intergenic 40.0%
!! TAGCAGGTACATATTTTGGG+TGG + tig0027224:28305-28324 Msa1433060:intron 40.0%
GTGCAGTGCATGTTATTATC+AGG - tig0027224:28578-28597 None:intergenic 40.0%
CATGTACCTAGGTGGTTAAA+TGG - tig0027224:28600-28619 None:intergenic 40.0%
CAAATGAACATGTACCTAGG+TGG - tig0027224:28608-28627 None:intergenic 40.0%
GTTGCCAATTTGATCTCGAA+AGG + tig0027224:28717-28736 Msa1433060:intron 40.0%
TTGATCTCGAAAGGAACTTG+TGG + tig0027224:28726-28745 Msa1433060:intron 40.0%
GTTAAATGCACAAGACTGTC+TGG + tig0027224:28788-28807 Msa1433060:intron 40.0%
!!! CATTTTGGTTGACCACATCT+GGG + tig0027224:29040-29059 Msa1433060:CDS 40.0%
TGTATAACTACCTCAGAGCA+AGG + tig0027224:29097-29116 Msa1433060:CDS 40.0%
TTAAGAAGAGGAGGATTGCT+GGG - tig0027224:29185-29204 None:intergenic 40.0%
ATTAAGAAGAGGAGGATTGC+TGG - tig0027224:29186-29205 None:intergenic 40.0%
! AATCAGAATCCCTTCAGGTT+CGG - tig0027224:29554-29573 None:intergenic 40.0%
TGCACAATCACTGCATTTGT+GGG - tig0027224:29617-29636 None:intergenic 40.0%
ACTGCTTCACAGGTTCATAA+TGG + tig0027224:29763-29782 Msa1433060:intron 40.0%
AACTTTCACAAGAACTCGGT+AGG - tig0027224:30125-30144 None:intergenic 40.0%
GATGGAGAAAGAATACAGAC+TGG + tig0027224:30150-30169 Msa1433060:three_prime_UTR 40.0%
!! AACGGAACAAGGTTGGTAGT+TGG - tig0027224:22900-22919 None:intergenic 45.0%
AAAGGTTGGAAGCGAAAGTG+AGG - tig0027224:23000-23019 None:intergenic 45.0%
GTGAGAGATTCGTGGAATTG+TGG - tig0027224:23066-23085 None:intergenic 45.0%
GAAGAAGAGTGAGAGATTCG+TGG - tig0027224:23074-23093 None:intergenic 45.0%
AATCTCTCACTCTTCTTCGC+CGG + tig0027224:23076-23095 Msa1433060:CDS 45.0%
AATCTCCGTTACATCATCGC+CGG + tig0027224:23104-23123 Msa1433060:CDS 45.0%
GTGGATCTACTGCATTTCAC+CGG - tig0027224:23138-23157 None:intergenic 45.0%
GGTGAAATGCAGTAGATCCA+CGG + tig0027224:23137-23156 Msa1433060:CDS 45.0%
CTTCTTCAATAGAGTCTCCG+AGG + tig0027224:23256-23275 Msa1433060:CDS 45.0%
TAGAGAATCTCCAGAAGAGG+TGG - tig0027224:23289-23308 None:intergenic 45.0%
CGATAGAGAATCTCCAGAAG+AGG - tig0027224:23292-23311 None:intergenic 45.0%
TCTGGAGATTCTCTATCGCT+CGG + tig0027224:23294-23313 Msa1433060:CDS 45.0%
CTACATGAGGTAGGTGCTAA+TGG - tig0027224:24029-24048 None:intergenic 45.0%
TTATTCAGGTCTTCGTCCAC+GGG + tig0027224:24182-24201 Msa1433060:intron 45.0%
AAAACTGGTGTGTGTGCATG+TGG - tig0027224:24509-24528 None:intergenic 45.0%
CACGGACCTAATACAAAGCA+AGG - tig0027224:24585-24604 None:intergenic 45.0%
AAAAGCTTGCCCTCCTTTAC+TGG - tig0027224:24799-24818 None:intergenic 45.0%
!! TTCTAGAGTCATTGCTGCCT+CGG + tig0027224:24817-24836 Msa1433060:CDS 45.0%
TCCAACTTCCAAGCATAGTC+TGG + tig0027224:24968-24987 Msa1433060:intron 45.0%
ACCAGACTATGCTTGGAAGT+TGG - tig0027224:24972-24991 None:intergenic 45.0%
! TACTCAGTTGTTTCAGGCCT+GGG - tig0027224:25247-25266 None:intergenic 45.0%
TGCATTTATGGCCCAAGGTT+TGG + tig0027224:25489-25508 Msa1433060:intron 45.0%
TTATGGCCCAAGGTTTGGAA+AGG + tig0027224:25494-25513 Msa1433060:intron 45.0%
AGTGTAAAAGACGACGCAGA+AGG + tig0027224:25595-25614 Msa1433060:CDS 45.0%
GACGCAGAAGGATCTAAAGA+TGG + tig0027224:25607-25626 Msa1433060:CDS 45.0%
!! CTTTTCTTGGCCTTCTGCAA+TGG - tig0027224:25641-25660 None:intergenic 45.0%
TTACACCCATGGTAACCAAC+TGG - tig0027224:25849-25868 None:intergenic 45.0%
TGAGAACACAGTTACACCCA+TGG - tig0027224:25860-25879 None:intergenic 45.0%
ATGGTAATTAGGGGGAAGAG+TGG - tig0027224:25953-25972 None:intergenic 45.0%
ACTCTTCCCCCTAATTACCA+TGG + tig0027224:25952-25971 Msa1433060:intron 45.0%
CTTAGAACCTCGTGTGAGTA+TGG + tig0027224:26043-26062 Msa1433060:CDS 45.0%
TGTGTTTCCATACTCACACG+AGG - tig0027224:26053-26072 None:intergenic 45.0%
CAGGATTCAGAGACAGGAAA+AGG - tig0027224:26701-26720 None:intergenic 45.0%
CTCAAGAAGAGCTTGAACCT+AGG - tig0027224:26765-26784 None:intergenic 45.0%
CTAGGTTCAAGCTCTTCTTG+AGG + tig0027224:26763-26782 Msa1433060:intron 45.0%
GCCTTACCAAATCGGATAAC+TGG + tig0027224:26785-26804 Msa1433060:CDS 45.0%
!! CCCAGTTATCCGATTTGGTA+AGG - tig0027224:26789-26808 None:intergenic 45.0%
TCGGATAACTGGGGATATAC+TGG + tig0027224:26796-26815 Msa1433060:CDS 45.0%
TCACTTCCTGCCAAATTGCT+AGG + tig0027224:26912-26931 Msa1433060:intron 45.0%
ACTCAACCTAGCAATTTGGC+AGG - tig0027224:26921-26940 None:intergenic 45.0%
! CTAGGTTGAGTTAGGCTCAA+GGG + tig0027224:26930-26949 Msa1433060:intron 45.0%
TGGAGGACCCAGATGAAATA+CGG + tig0027224:26986-27005 Msa1433060:CDS 45.0%
GCACTGAGCATTCCACATTA+TGG - tig0027224:27056-27075 None:intergenic 45.0%
TCAGCAACCTGCTTGTCTAA+AGG - tig0027224:27078-27097 None:intergenic 45.0%
TTTAGACAAGCAGGTTGCTG+AGG + tig0027224:27077-27096 Msa1433060:CDS 45.0%
TTAGACAAGCAGGTTGCTGA+GGG + tig0027224:27078-27097 Msa1433060:CDS 45.0%
GAGGGTAAGCTGTGAAATAC+TGG + tig0027224:27096-27115 Msa1433060:intron 45.0%
CTCATGATATGTAGAGGAGG+AGG + tig0027224:27188-27207 Msa1433060:intron 45.0%
ATGATATGTAGAGGAGGAGG+AGG + tig0027224:27191-27210 Msa1433060:intron 45.0%
GGAGGAAATTGAGATGCTTC+TGG + tig0027224:27209-27228 Msa1433060:CDS 45.0%
TGACATAAGAAAGGCCGTGA+AGG - tig0027224:27365-27384 None:intergenic 45.0%
GGTTAGCAAAACGCAGCTTT+GGG - tig0027224:27869-27888 None:intergenic 45.0%
TGGTTAGCAAAACGCAGCTT+TGG - tig0027224:27870-27889 None:intergenic 45.0%
! AAGCTGCGTTTTGCTAACCA+TGG + tig0027224:27870-27889 Msa1433060:intron 45.0%
TGGTTCCATTCAACAGCTCA+CGG + tig0027224:28212-28231 Msa1433060:intron 45.0%
ACTGCACCATTTAACCACCT+AGG + tig0027224:28591-28610 Msa1433060:intron 45.0%
GAACCTGAAGTCCTATCTTG+AGG + tig0027224:28897-28916 Msa1433060:CDS 45.0%
GTTCCTCAAGATAGGACTTC+AGG - tig0027224:28903-28922 None:intergenic 45.0%
!!! GCATTTTGGTTGACCACATC+TGG + tig0027224:29039-29058 Msa1433060:CDS 45.0%
TAAGAAGAGGAGGATTGCTG+GGG - tig0027224:29184-29203 None:intergenic 45.0%
ATTAAGTGCTCCGAACCTGA+AGG + tig0027224:29541-29560 Msa1433060:intron 45.0%
TTAAGTGCTCCGAACCTGAA+GGG + tig0027224:29542-29561 Msa1433060:intron 45.0%
GTGCACAATCACTGCATTTG+TGG - tig0027224:29618-29637 None:intergenic 45.0%
!!! TTTTTATTATTATTATTTGA+TGG - tig0027224:22824-22843 None:intergenic 5.0%
TACCAACCTTGTTCCGTTCC+CGG + tig0027224:22902-22921 Msa1433060:five_prime_UTR 50.0%
!! TTACGGTGGTTTTGCATGCC+GGG - tig0027224:22923-22942 None:intergenic 50.0%
!! GTTACGGTGGTTTTGCATGC+CGG - tig0027224:22924-22943 None:intergenic 50.0%
AAATTCAGAAGTGGCGACGG+TGG - tig0027224:22949-22968 None:intergenic 50.0%
GTCGGAGAAGAAGAGGTAGT+TGG - tig0027224:23034-23053 None:intergenic 50.0%
!! GAATTGTGGTTCGGTGAGGT+CGG - tig0027224:23052-23071 None:intergenic 50.0%
TTCATCGGAATCAGACGCGA+CGG - tig0027224:23196-23215 None:intergenic 50.0%
GAAGAGGTGGTTGCAATCCT+CGG - tig0027224:23276-23295 None:intergenic 50.0%
AGGATTGCAACCACCTCTTC+TGG + tig0027224:23276-23295 Msa1433060:CDS 50.0%
TTGCTCTTGGGGTTTAACCG+AGG - tig0027224:24837-24856 None:intergenic 50.0%
AACCCCAAGAGCAACAATGG+AGG + tig0027224:24843-24862 Msa1433060:CDS 50.0%
ACCCCAAGAGCAACAATGGA+GGG + tig0027224:24844-24863 Msa1433060:CDS 50.0%
! CTACTCAGTTGTTTCAGGCC+TGG - tig0027224:25248-25267 None:intergenic 50.0%
GCAGAAGGCCAAGAAAAGTG+TGG + tig0027224:25643-25662 Msa1433060:CDS 50.0%
TGTCGACATGGAGAAGTAGC+AGG - tig0027224:26249-26268 None:intergenic 50.0%
! GCTAGGTTGAGTTAGGCTCA+AGG + tig0027224:26929-26948 Msa1433060:intron 50.0%
! GCAGATGCTGCTTGATCTTC+TGG + tig0027224:26966-26985 Msa1433060:CDS 50.0%
! GATGCTGCTTGATCTTCTGG+AGG + tig0027224:26969-26988 Msa1433060:CDS 50.0%
AGGACCCAGATGAAATACGG+AGG + tig0027224:26989-27008 Msa1433060:CDS 50.0%
CTCAGTGCCTTTAGACAAGC+AGG + tig0027224:27068-27087 Msa1433060:CDS 50.0%
CTTGTCACGGTCAAGCTGAA+AGG + tig0027224:27677-27696 Msa1433060:CDS 50.0%
TACAATTCTAAACCCCCCCC+TGG - tig0027224:27780-27799 None:intergenic 50.0%
TTCCATTCAACAGCTCACGG+AGG + tig0027224:28215-28234 Msa1433060:intron 50.0%
ACGGAGGCTTGAAGTTAGCA+GGG + tig0027224:28231-28250 Msa1433060:CDS 50.0%
CCACACAGAATGTTCCAACC+TGG - tig0027224:28270-28289 None:intergenic 50.0%
! CCAGGTTGGAACATTCTGTG+TGG + tig0027224:28267-28286 Msa1433060:CDS 50.0%
GGAACATTCTGTGTGGCAGT+TGG + tig0027224:28274-28293 Msa1433060:CDS 50.0%
GTCCTATCTTGAGGAACGTG+TGG + tig0027224:28906-28925 Msa1433060:CDS 50.0%
CACCACACGTTCCTCAAGAT+AGG - tig0027224:28911-28930 None:intergenic 50.0%
ACGTATGGCAGAGCTTATCG+AGG - tig0027224:29459-29478 None:intergenic 50.0%
CCTAGCGAAGAGTCTCTTGA+TGG - tig0027224:29807-29826 None:intergenic 50.0%
CCATCAAGAGACTCTTCGCT+AGG + tig0027224:29804-29823 Msa1433060:three_prime_UTR 50.0%
! TCGCTAGGTTGTTGCTTGTG+TGG + tig0027224:29819-29838 Msa1433060:three_prime_UTR 50.0%
! CGCTAGGTTGTTGCTTGTGT+GGG + tig0027224:29820-29839 Msa1433060:three_prime_UTR 50.0%
!! GTGGTTTTGCATGCCGGGAA+CGG - tig0027224:22918-22937 None:intergenic 55.0%
! TAGTTGGTGCGCGTGAGGAA+AGG - tig0027224:23018-23037 None:intergenic 55.0%
!! CGTGGAATTGTGGTTCGGTG+AGG - tig0027224:23056-23075 None:intergenic 55.0%
GATCCACGGAAGAAAAGCCG+TGG + tig0027224:23151-23170 Msa1433060:CDS 55.0%
! GTTCCACGGCTTTTCTTCCG+TGG - tig0027224:23157-23176 None:intergenic 55.0%
TCGGTTTCAGCGTCGTTCCA+CGG - tig0027224:23171-23190 None:intergenic 55.0%
GGAATCAGACGCGACGGTTT+CGG - tig0027224:23190-23209 None:intergenic 55.0%
TCCACGGGACGTTAGAAGTG+TGG + tig0027224:24197-24216 Msa1433060:CDS 55.0%
TCCACACTTCTAACGTCCCG+TGG - tig0027224:24201-24220 None:intergenic 55.0%
GCCCTCCATTGTTGCTCTTG+GGG - tig0027224:24848-24867 None:intergenic 55.0%
GGCCCTCCATTGTTGCTCTT+GGG - tig0027224:24849-24868 None:intergenic 55.0%
TGGCCCTCCATTGTTGCTCT+TGG - tig0027224:24850-24869 None:intergenic 55.0%
GGTGTAAGTCTCGTTCCCTG+TGG + tig0027224:25755-25774 Msa1433060:intron 55.0%
! ACGTTTGGAGCGGAGACTGA+TGG + tig0027224:26019-26038 Msa1433060:CDS 55.0%
CAGGGACAGGATTCAGAGAC+AGG - tig0027224:26707-26726 None:intergenic 55.0%
AGAGCTTGAACCTAGGGCCA+GGG - tig0027224:26758-26777 None:intergenic 55.0%
AAGAGCTTGAACCTAGGGCC+AGG - tig0027224:26759-26778 None:intergenic 55.0%
GTTGAGTTAGGCTCAAGGGC+AGG + tig0027224:26934-26953 Msa1433060:CDS 55.0%
AGCCTCCGTGAGCTGTTGAA+TGG - tig0027224:28220-28239 None:intergenic 55.0%
CACGGAGGCTTGAAGTTAGC+AGG + tig0027224:28230-28249 Msa1433060:CDS 55.0%
GAGGCTTGAAGTTAGCAGGG+TGG + tig0027224:28234-28253 Msa1433060:CDS 55.0%
GTGGAACTGCTTCTCCAGGT+TGG + tig0027224:28253-28272 Msa1433060:CDS 55.0%
AGGAGGATTGCTGGGGAAAC+AGG - tig0027224:29177-29196 None:intergenic 55.0%
TGAATCTGTCTACCCCCCTC+TGG - tig0027224:29736-29755 None:intergenic 55.0%
ATCCATGCACTGCGTGACTC+TGG - tig0027224:30014-30033 None:intergenic 55.0%
GAGTCACGCAGTGCATGGAT+CGG + tig0027224:30014-30033 Msa1433060:three_prime_UTR 55.0%
TGCCGGGAACGGAACAAGGT+TGG - tig0027224:22907-22926 None:intergenic 60.0%
TGCATGCCGGGAACGGAACA+AGG - tig0027224:22911-22930 None:intergenic 60.0%
AGTGGCGACGGTGGAGGTTA+CGG - tig0027224:22940-22959 None:intergenic 60.0%
TTCAGAAGTGGCGACGGTGG+AGG - tig0027224:22946-22965 None:intergenic 60.0%
TGGTGCGCGTGAGGAAAGGT+TGG - tig0027224:23014-23033 None:intergenic 60.0%
! AGAGGTAGTTGGTGCGCGTG+AGG - tig0027224:23023-23042 None:intergenic 60.0%
CGGTGAGGTCGGAGAAGAAG+AGG - tig0027224:23041-23060 None:intergenic 60.0%
!! GAGCGCCGGCGATGATGTAA+CGG - tig0027224:23112-23131 None:intergenic 60.0%
!! CATTTCACCGGCTTGAGCGC+CGG - tig0027224:23126-23145 None:intergenic 60.0%
! TTTTCTCTCCCCCTACCCCC+TGG + tig0027224:26738-26757 Msa1433060:intron 60.0%
AGCTTGAACCTAGGGCCAGG+GGG - tig0027224:26756-26775 None:intergenic 60.0%
GAGCTTGAACCTAGGGCCAG+GGG - tig0027224:26757-26776 None:intergenic 60.0%
CAGGGTGGAACTGCTTCTCC+AGG + tig0027224:28249-28268 Msa1433060:CDS 60.0%
! GCAGTTGGTGCCCTTGTAGC+AGG + tig0027224:28289-28308 Msa1433060:CDS 60.0%
TGCTGGGGAAACAGGCCAGA+AGG - tig0027224:29169-29188 None:intergenic 60.0%
GTCCAGAGTCACGCAGTGCA+TGG + tig0027224:30009-30028 Msa1433060:three_prime_UTR 60.0%
ATCATCGCCGGCGCTCAAGC+CGG + tig0027224:23116-23135 Msa1433060:CDS 65.0%
AACCTAGGGCCAGGGGGTAG+GGG - tig0027224:26750-26769 None:intergenic 65.0%
GAACCTAGGGCCAGGGGGTA+GGG - tig0027224:26751-26770 None:intergenic 65.0%
TGAACCTAGGGCCAGGGGGT+AGG - tig0027224:26752-26771 None:intergenic 65.0%
GCTCAAGGGCAGGAGCTCTC+AGG + tig0027224:26944-26963 Msa1433060:CDS 65.0%
GGCGACGGTGGAGGTTACGG+TGG - tig0027224:22937-22956 None:intergenic 70.0%
ACCTAGGGCCAGGGGGTAGG+GGG - tig0027224:26749-26768 None:intergenic 70.0%
TCCCCCTACCCCCTGGCCCT+AGG + tig0027224:26745-26764 Msa1433060:intron 75.0%
Chromosome Type Strat End Strand Name
tig0027224 gene 22776 30177 22776 ID=Msa1433060;Name=Msa1433060
tig0027224 mRNA 22776 30177 22776 ID=Msa1433060-mRNA-1;Parent=Msa1433060;Name=Msa1433060-mRNA-1;_AED=0.15;_eAED=0.15;_QI=200|0.86|0.93|0.93|0.86|0.87|16|509|483
tig0027224 exon 22776 23338 22776 ID=Msa1433060-mRNA-1:exon:8419;Parent=Msa1433060-mRNA-1
tig0027224 exon 23561 23633 23561 ID=Msa1433060-mRNA-1:exon:8420;Parent=Msa1433060-mRNA-1
tig0027224 exon 24190 24260 24190 ID=Msa1433060-mRNA-1:exon:8421;Parent=Msa1433060-mRNA-1
tig0027224 exon 24598 24683 24598 ID=Msa1433060-mRNA-1:exon:8422;Parent=Msa1433060-mRNA-1
tig0027224 exon 24800 24890 24800 ID=Msa1433060-mRNA-1:exon:8423;Parent=Msa1433060-mRNA-1
tig0027224 exon 25589 25673 25589 ID=Msa1433060-mRNA-1:exon:8424;Parent=Msa1433060-mRNA-1
tig0027224 exon 25987 26072 25987 ID=Msa1433060-mRNA-1:exon:8425;Parent=Msa1433060-mRNA-1
tig0027224 exon 26767 26847 26767 ID=Msa1433060-mRNA-1:exon:8426;Parent=Msa1433060-mRNA-1
tig0027224 exon 26934 27099 26934 ID=Msa1433060-mRNA-1:exon:8427;Parent=Msa1433060-mRNA-1
tig0027224 exon 27202 27247 27202 ID=Msa1433060-mRNA-1:exon:8428;Parent=Msa1433060-mRNA-1
tig0027224 exon 27669 27749 27669 ID=Msa1433060-mRNA-1:exon:8429;Parent=Msa1433060-mRNA-1
tig0027224 exon 28228 28310 28228 ID=Msa1433060-mRNA-1:exon:8430;Parent=Msa1433060-mRNA-1
tig0027224 exon 28884 28927 28884 ID=Msa1433060-mRNA-1:exon:8431;Parent=Msa1433060-mRNA-1
tig0027224 exon 29036 29153 29036 ID=Msa1433060-mRNA-1:exon:8432;Parent=Msa1433060-mRNA-1
tig0027224 exon 29584 29667 29584 ID=Msa1433060-mRNA-1:exon:8433;Parent=Msa1433060-mRNA-1
tig0027224 exon 29775 30177 29775 ID=Msa1433060-mRNA-1:exon:8434;Parent=Msa1433060-mRNA-1
tig0027224 five_prime_UTR 22776 22975 22776 ID=Msa1433060-mRNA-1:five_prime_utr;Parent=Msa1433060-mRNA-1
tig0027224 CDS 22976 23338 22976 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 23561 23633 23561 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 24190 24260 24190 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 24598 24683 24598 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 24800 24890 24800 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 25589 25673 25589 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 25987 26072 25987 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 26767 26847 26767 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 26934 27099 26934 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 27202 27247 27202 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 27669 27749 27669 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 28228 28310 28228 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 28884 28927 28884 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 CDS 29036 29131 29036 ID=Msa1433060-mRNA-1:cds;Parent=Msa1433060-mRNA-1
tig0027224 three_prime_UTR 29132 29153 29132 ID=Msa1433060-mRNA-1:three_prime_utr;Parent=Msa1433060-mRNA-1
tig0027224 three_prime_UTR 29584 29667 29584 ID=Msa1433060-mRNA-1:three_prime_utr;Parent=Msa1433060-mRNA-1
tig0027224 three_prime_UTR 29775 30177 29775 ID=Msa1433060-mRNA-1:three_prime_utr;Parent=Msa1433060-mRNA-1
Gene Sequence

>Msa1433060

ATGGCTTTAACTCTAACTTCTCCTCACTTTCGCTTCCAACCTTTCCTCACGCGCACCAACTACCTCTTCTTCTCCGACCTCACCGAACCACAATTCCACGAATCTCTCACTCTTCTTCGCCGGAGCAAAATCTCCGTTACATCATCGCCGGCGCTCAAGCCGGTGAAATGCAGTAGATCCACGGAAGAAAAGCCGTGGAACGACGCTGAAACCGAAACCGTCGCGTCTGATTCCGATGAAGCTGTTGATGATGAATCAAACGGTCAAGCTCCGAGCAAAACTTCTTCAATAGAGTCTCCGAGGATTGCAACCACCTCTTCTGGAGATTCTCTATCGCTCGGAATTCGTGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGATGGGACAGTATCGACTAGAAAAATCAATAGAAGACAATTATTGAAGTCTAGTGGTCTTCGTCCACGGGACGTTAGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACTTGGGTTCACTACGAGCAATCGCAATGCAAGATTGTGTACTTATATTTGATTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTAAACCCCAAGAGCAACAATGGAGGGCCATCAATGCCATTTGAAATCGAGTGCTTAAGTGTAAAAGACGACGCAGAAGGATCTAAAGATGGTAACAATTCCATTGCAGAAGGCCAAGAAAAGTGTGGCCTTAAAAGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTGAGTATGGAAACACAGTTCAAGCTCTTCTTGAGGCCTTACCAAATCGGATAACTGGGGATATACTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCAAGGGCAGGAGCTCTCAGGCAGATGCTGCTTGATCTTCTGGAGGACCCAGATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACAATAAATAAAGGAAACCATAATGTGGAATGCTCAGTGCCTTTAGACAAGCAGGTTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCACGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTAAGCTCACGGAGGCTTGAAGTTAGCAGGGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGCATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACGTGTGTTTGCATTTTGGTTGACCACATCTGGGATTATTATTGGTGGCATTGTTGTTTTTTTTATTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA
Protein sequence

>Msa1433060

MALTLTSPHFRFQPFLTRTNYLFFSDLTEPQFHESLTLLRRSKISVTSSPALKPVKCSRSTEEKPWNDAETETVASDSDEAVDDESNGQAPSKTSSIESPRIATTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKSNNGGPSMPFEIECLSVKDDAEGSKDGNNSIAEGQEKCGLKSCRSSIAFKNTTFGAETDGLRTSCEYGNTVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPDEIRRICIMGRNCTINKGNHNVECSVPLDKQVAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEERVFAFWLTTSGIIIGGIVVFFIMYNYLRARKIF*