Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356450 | XP_013450691.1 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356450 | sp|Q42806|KPYC_SOYBN | 92.564 | 511 | 37 | 1 | 1 | 510 | 1 | 511 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356450 | A0A072U4Q0 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1356450 | 0.833356 | 5.588711e-56 | -8.615850e-47 |
| Msa0010210 | Msa1356450 | 0.811224 | 7.790097e-51 | -8.615850e-47 |
| Msa0015570 | Msa1356450 | 0.801645 | 8.165817e-49 | -8.615850e-47 |
| Msa0026250 | Msa1356450 | 0.850347 | 1.800601e-60 | -8.615850e-47 |
| Msa0035740 | Msa1356450 | 0.806671 | 7.345920e-50 | -8.615850e-47 |
| Msa0036550 | Msa1356450 | 0.837647 | 4.594057e-57 | -8.615850e-47 |
| Msa0043840 | Msa1356450 | 0.834991 | 2.175460e-56 | -8.615850e-47 |
| Msa0044440 | Msa1356450 | 0.800279 | 1.552571e-48 | -8.615850e-47 |
| Msa0045620 | Msa1356450 | 0.815692 | 8.116328e-52 | -8.615850e-47 |
| Msa0050530 | Msa1356450 | 0.842062 | 3.252229e-58 | -8.615850e-47 |
| Msa0058230 | Msa1356450 | 0.807448 | 5.030160e-50 | -8.615850e-47 |
| Msa0058370 | Msa1356450 | 0.809303 | 2.022551e-50 | -8.615850e-47 |
| Msa0063190 | Msa1356450 | 0.818364 | 2.036884e-52 | -8.615850e-47 |
| Msa0074060 | Msa1356450 | 0.813344 | 2.684525e-51 | -8.615850e-47 |
| Msa0080820 | Msa1356450 | 0.821403 | 4.113704e-53 | -8.615850e-47 |
| Msa0086250 | Msa1356450 | 0.809560 | 1.781387e-50 | -8.615850e-47 |
| Msa0089540 | Msa1356450 | 0.848870 | 4.651744e-60 | -8.615850e-47 |
| Msa0090500 | Msa1356450 | 0.822978 | 1.773177e-53 | -8.615850e-47 |
| Msa0100600 | Msa1356450 | 0.833337 | 5.650995e-56 | -8.615850e-47 |
| Msa0100890 | Msa1356450 | 0.841720 | 4.004000e-58 | -8.615850e-47 |
| Msa0104740 | Msa1356450 | 0.812299 | 4.545747e-51 | -8.615850e-47 |
| Msa0109730 | Msa1356450 | 0.817343 | 3.464234e-52 | -8.615850e-47 |
| Msa0116620 | Msa1356450 | 0.852575 | 4.218026e-61 | -8.615850e-47 |
| Msa0116710 | Msa1356450 | 0.856407 | 3.285766e-62 | -8.615850e-47 |
| Msa1347610 | Msa1356450 | 0.847145 | 1.391840e-59 | -8.615850e-47 |
| Msa1349850 | Msa1356450 | -0.842903 | 1.946072e-58 | -8.615850e-47 |
| Msa1351900 | Msa1356450 | 0.814881 | 1.228984e-51 | -8.615850e-47 |
| Msa1356450 | Msa1357070 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa1356450 | Msa1362590 | 0.833794 | 4.344938e-56 | -8.615850e-47 |
| Msa1356450 | Msa1363690 | 0.815508 | 8.916791e-52 | -8.615850e-47 |
| Msa1356450 | Msa1365230 | 0.807814 | 4.206407e-50 | -8.615850e-47 |
| Msa1356450 | Msa1368170 | 0.832264 | 1.043728e-55 | -8.615850e-47 |
| Msa1356450 | Msa1369180 | -0.800070 | 1.712311e-48 | -8.615850e-47 |
| Msa1356450 | Msa1371270 | 0.850112 | 2.095756e-60 | -8.615850e-47 |
| Msa1356450 | Msa1371530 | 0.832174 | 1.099064e-55 | -8.615850e-47 |
| Msa1356450 | Msa1371800 | 0.820841 | 5.543256e-53 | -8.615850e-47 |
| Msa1356450 | Msa1372030 | 0.845943 | 2.962451e-59 | -8.615850e-47 |
| Msa1356450 | Msa1376310 | 0.816735 | 4.745557e-52 | -8.615850e-47 |
| Msa1356450 | Msa1377140 | 0.852636 | 4.053287e-61 | -8.615850e-47 |
| Msa1356450 | Msa1379940 | 0.804071 | 2.575543e-49 | -8.615850e-47 |
| Msa1356450 | Msa1381800 | 0.815826 | 7.577820e-52 | -8.615850e-47 |
| Msa1356450 | Msa1385570 | 0.848432 | 6.152923e-60 | -8.615850e-47 |
| Msa1356450 | Msa1389820 | 0.806908 | 6.545044e-50 | -8.615850e-47 |
| Msa1356450 | Msa1395720 | 0.834388 | 3.084343e-56 | -8.615850e-47 |
| Msa1356450 | Msa1396110 | 0.809588 | 1.757141e-50 | -8.615850e-47 |
| Msa1356450 | Msa1396550 | 0.811725 | 6.064005e-51 | -8.615850e-47 |
| Msa1356450 | Msa1409060 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa1356450 | Msa1417930 | 0.832041 | 1.185297e-55 | -8.615850e-47 |
| Msa1356450 | Msa1420830 | 0.854880 | 9.163991e-62 | -8.615850e-47 |
| Msa1356450 | Msa1434300 | 0.803551 | 3.303059e-49 | -8.615850e-47 |
| Msa1356450 | Msa1434700 | 0.852350 | 4.889363e-61 | -8.615850e-47 |
| Msa1356450 | Msa1436640 | 0.810801 | 9.619242e-51 | -8.615850e-47 |
| Msa1356450 | Msa1438510 | 0.811979 | 5.338995e-51 | -8.615850e-47 |
| Msa1356450 | Msa1447900 | 0.833763 | 4.425049e-56 | -8.615850e-47 |
| Msa1356450 | Msa1450290 | 0.835935 | 1.255875e-56 | -8.615850e-47 |
| Msa1356450 | Msa1453030 | 0.852855 | 3.509071e-61 | -8.615850e-47 |
| Msa1356450 | Msa1456040 | 0.831234 | 1.873504e-55 | -8.615850e-47 |
| Msa0604750 | Msa1356450 | 0.804483 | 2.113664e-49 | -8.615850e-47 |
| Msa0612880 | Msa1356450 | -0.812165 | 4.862413e-51 | -8.615850e-47 |
| Msa0616230 | Msa1356450 | 0.815498 | 8.963798e-52 | -8.615850e-47 |
| Msa0619320 | Msa1356450 | -0.801224 | 9.961244e-49 | -8.615850e-47 |
| Msa0620900 | Msa1356450 | 0.842482 | 2.516908e-58 | -8.615850e-47 |
| Msa0623040 | Msa1356450 | 0.810362 | 1.196953e-50 | -8.615850e-47 |
| Msa0623310 | Msa1356450 | 0.806682 | 7.304645e-50 | -8.615850e-47 |
| Msa0626980 | Msa1356450 | 0.808113 | 3.632125e-50 | -8.615850e-47 |
| Msa0627360 | Msa1356450 | 0.806585 | 7.657922e-50 | -8.615850e-47 |
| Msa0646260 | Msa1356450 | 0.804142 | 2.489238e-49 | -8.615850e-47 |
| Msa0655710 | Msa1356450 | 0.819311 | 1.241553e-52 | -8.615850e-47 |
| Msa0660260 | Msa1356450 | 0.870593 | 1.297582e-66 | -8.615850e-47 |
| Msa0663290 | Msa1356450 | 0.811769 | 5.931598e-51 | -8.615850e-47 |
| Msa0664070 | Msa1356450 | 0.805518 | 1.284571e-49 | -8.615850e-47 |
| Msa0673940 | Msa1356450 | 0.840384 | 8.984229e-58 | -8.615850e-47 |
| Msa0685610 | Msa1356450 | 0.883324 | 4.941310e-71 | -8.615850e-47 |
| Msa0687370 | Msa1356450 | 0.801307 | 9.578559e-49 | -8.615850e-47 |
| Msa0688620 | Msa1356450 | 0.817759 | 2.791361e-52 | -8.615850e-47 |
| Msa0695560 | Msa1356450 | 0.800851 | 1.187181e-48 | -8.615850e-47 |
| Msa0699560 | Msa1356450 | 0.805170 | 1.519148e-49 | -8.615850e-47 |
| Msa0701250 | Msa1356450 | 0.800328 | 1.517475e-48 | -8.615850e-47 |
| Msa0706690 | Msa1356450 | 0.845103 | 5.003516e-59 | -8.615850e-47 |
| Msa0708020 | Msa1356450 | 0.817231 | 3.670403e-52 | -8.615850e-47 |
| Msa0749190 | Msa1356450 | 0.814316 | 1.639423e-51 | -8.615850e-47 |
| Msa0750520 | Msa1356450 | 0.817180 | 3.769919e-52 | -8.615850e-47 |
| Msa0751720 | Msa1356450 | 0.833979 | 3.906929e-56 | -8.615850e-47 |
| Msa0755480 | Msa1356450 | -0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0774060 | Msa1356450 | 0.811694 | 6.158282e-51 | -8.615850e-47 |
| Msa0786740 | Msa1356450 | 0.823288 | 1.501455e-53 | -8.615850e-47 |
| Msa0822510 | Msa1356450 | 0.808451 | 3.077321e-50 | -8.615850e-47 |
| Msa0827420 | Msa1356450 | 0.801159 | 1.027133e-48 | -8.615850e-47 |
| Msa0831820 | Msa1356450 | 0.827056 | 1.930837e-54 | -8.615850e-47 |
| Msa0840540 | Msa1356450 | 0.803935 | 2.749560e-49 | -8.615850e-47 |
| Msa0130360 | Msa1356450 | 0.807563 | 4.754017e-50 | -8.615850e-47 |
| Msa0134830 | Msa1356450 | 0.804390 | 2.210485e-49 | -8.615850e-47 |
| Msa0135230 | Msa1356450 | 0.840541 | 8.169812e-58 | -8.615850e-47 |
| Msa0137010 | Msa1356450 | -0.805421 | 1.345581e-49 | -8.615850e-47 |
| Msa0137970 | Msa1356450 | 0.814310 | 1.644556e-51 | -8.615850e-47 |
| Msa0138350 | Msa1356450 | 0.841390 | 4.891196e-58 | -8.615850e-47 |
| Msa0145850 | Msa1356450 | 0.817871 | 2.633327e-52 | -8.615850e-47 |
| Msa0148310 | Msa1356450 | 0.802882 | 4.542872e-49 | -8.615850e-47 |
| Msa0159730 | Msa1356450 | 0.818404 | 1.995311e-52 | -8.615850e-47 |
| Msa0168380 | Msa1356450 | 0.804695 | 1.909684e-49 | -8.615850e-47 |
| Msa0173380 | Msa1356450 | 0.874766 | 5.224139e-68 | -8.615850e-47 |
| Msa0176600 | Msa1356450 | 0.832706 | 8.112237e-56 | -8.615850e-47 |
| Msa0183920 | Msa1356450 | 0.808439 | 3.095945e-50 | -8.615850e-47 |
| Msa0189250 | Msa1356450 | -0.806925 | 6.490559e-50 | -8.615850e-47 |
| Msa0192830 | Msa1356450 | 0.801718 | 7.889885e-49 | -8.615850e-47 |
| Msa0205250 | Msa1356450 | 0.837174 | 6.073376e-57 | -8.615850e-47 |
| Msa0206370 | Msa1356450 | 0.802215 | 6.236939e-49 | -8.615850e-47 |
| Msa0211460 | Msa1356450 | 0.813080 | 3.067089e-51 | -8.615850e-47 |
| Msa0219840 | Msa1356450 | 0.836330 | 9.967035e-57 | -8.615850e-47 |
| Msa0221180 | Msa1356450 | 0.845005 | 5.318093e-59 | -8.615850e-47 |
| Msa0221460 | Msa1356450 | -0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0228690 | Msa1356450 | 0.811615 | 6.408816e-51 | -8.615850e-47 |
| Msa0237240 | Msa1356450 | 0.802626 | 5.130217e-49 | -8.615850e-47 |
| Msa1227760 | Msa1356450 | 0.811655 | 6.282042e-51 | -8.615850e-47 |
| Msa1231440 | Msa1356450 | 0.835667 | 1.468278e-56 | -8.615850e-47 |
| Msa1231490 | Msa1356450 | 0.807292 | 5.427700e-50 | -8.615850e-47 |
| Msa1253270 | Msa1356450 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa1255710 | Msa1356450 | 0.802743 | 4.853071e-49 | -8.615850e-47 |
| Msa1265570 | Msa1356450 | 0.805855 | 1.091076e-49 | -8.615850e-47 |
| Msa1267930 | Msa1356450 | 0.801085 | 1.063528e-48 | -8.615850e-47 |
| Msa1273320 | Msa1356450 | 0.802240 | 6.161165e-49 | -8.615850e-47 |
| Msa1278000 | Msa1356450 | 0.828826 | 7.244995e-55 | -8.615850e-47 |
| Msa1278030 | Msa1356450 | 0.838135 | 3.441649e-57 | -8.615850e-47 |
| Msa1308860 | Msa1356450 | 0.829574 | 4.770718e-55 | -8.615850e-47 |
| Msa1329570 | Msa1356450 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
| Msa1334670 | Msa1356450 | 0.805876 | 1.080299e-49 | -8.615850e-47 |
| Msa1335500 | Msa1356450 | 0.823686 | 1.211805e-53 | -8.615850e-47 |
| Msa1341750 | Msa1356450 | 0.815404 | 9.404852e-52 | -8.615850e-47 |
| Msa1343460 | Msa1356450 | 0.847043 | 1.484184e-59 | -8.615850e-47 |
| Msa0372100 | Msa1356450 | 0.851890 | 6.607016e-61 | -8.615850e-47 |
| Msa0375550 | Msa1356450 | 0.818862 | 1.570338e-52 | -8.615850e-47 |
| Msa0384590 | Msa1356450 | 0.803533 | 3.331854e-49 | -8.615850e-47 |
| Msa0388250 | Msa1356450 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
| Msa0418100 | Msa1356450 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0430040 | Msa1356450 | -0.828328 | 9.554175e-55 | -8.615850e-47 |
| Msa0432200 | Msa1356450 | 0.840459 | 8.585027e-58 | -8.615850e-47 |
| Msa0434090 | Msa1356450 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
| Msa0436100 | Msa1356450 | 0.805103 | 1.569082e-49 | -8.615850e-47 |
| Msa0442090 | Msa1356450 | 0.800686 | 1.282815e-48 | -8.615850e-47 |
| Msa0463820 | Msa1356450 | -0.810037 | 1.406345e-50 | -8.615850e-47 |
| Msa0478400 | Msa1356450 | 0.800086 | 1.699339e-48 | -8.615850e-47 |
| Msa1008850 | Msa1356450 | 0.809497 | 1.837632e-50 | -8.615850e-47 |
| Msa1026710 | Msa1356450 | 0.867826 | 1.027485e-65 | -8.615850e-47 |
| Msa1027160 | Msa1356450 | 0.825976 | 3.495052e-54 | -8.615850e-47 |
| Msa1033420 | Msa1356450 | 0.824589 | 7.436737e-54 | -8.615850e-47 |
| Msa1034960 | Msa1356450 | 0.827732 | 1.330009e-54 | -8.615850e-47 |
| Msa1038860 | Msa1356450 | 0.813892 | 2.033961e-51 | -8.615850e-47 |
| Msa1042300 | Msa1356450 | 0.827518 | 1.496946e-54 | -8.615850e-47 |
| Msa1057620 | Msa1356450 | -0.813309 | 2.731590e-51 | -8.615850e-47 |
| Msa1060300 | Msa1356450 | 0.802379 | 5.769585e-49 | -8.615850e-47 |
| Msa1065400 | Msa1356450 | 0.809888 | 1.514621e-50 | -8.615850e-47 |
| Msa1071410 | Msa1356450 | 0.819714 | 1.004651e-52 | -8.615850e-47 |
| Msa1073060 | Msa1356450 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa1085560 | Msa1356450 | 0.856287 | 3.562059e-62 | -8.615850e-47 |
| Msa1085680 | Msa1356450 | 0.828895 | 6.970537e-55 | -8.615850e-47 |
| Msa0244820 | Msa1356450 | -0.812159 | 4.877362e-51 | -8.615850e-47 |
| Msa0258910 | Msa1356450 | 0.817247 | 3.641588e-52 | -8.615850e-47 |
| Msa0260980 | Msa1356450 | 0.814129 | 1.802646e-51 | -8.615850e-47 |
| Msa0261700 | Msa1356450 | 0.807255 | 5.526300e-50 | -8.615850e-47 |
| Msa0262750 | Msa1356450 | 0.826161 | 3.157734e-54 | -8.615850e-47 |
| Msa0272790 | Msa1356450 | 0.803962 | 2.714045e-49 | -8.615850e-47 |
| Msa0276800 | Msa1356450 | -0.824258 | 8.898251e-54 | -8.615850e-47 |
| Msa0291320 | Msa1356450 | 0.811172 | 7.997150e-51 | -8.615850e-47 |
| Msa0297200 | Msa1356450 | 0.824068 | 9.862028e-54 | -8.615850e-47 |
| Msa0300470 | Msa1356450 | 0.829857 | 4.069688e-55 | -8.615850e-47 |
| Msa0300670 | Msa1356450 | -0.821899 | 3.159007e-53 | -8.615850e-47 |
| Msa0316720 | Msa1356450 | -0.821291 | 4.366439e-53 | -8.615850e-47 |
| Msa0336430 | Msa1356450 | 0.835165 | 1.966931e-56 | -8.615850e-47 |
| Msa0336460 | Msa1356450 | 0.830554 | 2.751307e-55 | -8.615850e-47 |
| Msa0336520 | Msa1356450 | 0.845490 | 3.930740e-59 | -8.615850e-47 |
| Msa0337760 | Msa1356450 | -0.806272 | 8.917726e-50 | -8.615850e-47 |
| Msa0337970 | Msa1356450 | 0.819697 | 1.013414e-52 | -8.615850e-47 |
| Msa1111010 | Msa1356450 | 0.803520 | 3.351779e-49 | -8.615850e-47 |
| Msa1111910 | Msa1356450 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
| Msa1130770 | Msa1356450 | 0.819767 | 9.769573e-53 | -8.615850e-47 |
| Msa1130780 | Msa1356450 | 0.806362 | 8.536173e-50 | -8.615850e-47 |
| Msa1134770 | Msa1356450 | 0.809683 | 1.676064e-50 | -8.615850e-47 |
| Msa1144990 | Msa1356450 | 0.820644 | 6.151763e-53 | -8.615850e-47 |
| Msa1154630 | Msa1356450 | 0.871913 | 4.756413e-67 | -8.615850e-47 |
| Msa1162360 | Msa1356450 | 0.804812 | 1.804681e-49 | -8.615850e-47 |
| Msa1188930 | Msa1356450 | 0.854941 | 8.801165e-62 | -8.615850e-47 |
| Msa1197720 | Msa1356450 | 0.800231 | 1.588176e-48 | -8.615850e-47 |
| Msa1200360 | Msa1356450 | 0.809534 | 1.804839e-50 | -8.615850e-47 |
| Msa1220720 | Msa1356450 | 0.803001 | 4.292493e-49 | -8.615850e-47 |
| Msa0509630 | Msa1356450 | 0.818201 | 2.218298e-52 | -8.615850e-47 |
| Msa0513580 | Msa1356450 | -0.807699 | 4.450179e-50 | -8.615850e-47 |
| Msa0521060 | Msa1356450 | 0.848474 | 5.988585e-60 | -8.615850e-47 |
| Msa0527200 | Msa1356450 | 0.830439 | 2.934550e-55 | -8.615850e-47 |
| Msa0530660 | Msa1356450 | 0.807358 | 5.256920e-50 | -8.615850e-47 |
| Msa0541740 | Msa1356450 | 0.803572 | 3.270751e-49 | -8.615850e-47 |
| Msa0541880 | Msa1356450 | 0.874466 | 6.608466e-68 | -8.615850e-47 |
| Msa0541940 | Msa1356450 | 0.862058 | 6.631461e-64 | -8.615850e-47 |
| Msa0549870 | Msa1356450 | 0.805884 | 1.076255e-49 | -8.615850e-47 |
| Msa0557850 | Msa1356450 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0568460 | Msa1356450 | -0.805939 | 1.047692e-49 | -8.615850e-47 |
| Msa0571350 | Msa1356450 | 0.884842 | 1.357686e-71 | -8.615850e-47 |
| Msa0572360 | Msa1356450 | 0.815570 | 8.637762e-52 | -8.615850e-47 |
| Msa0574660 | Msa1356450 | 0.809101 | 2.234207e-50 | -8.615850e-47 |
| Msa0575950 | Msa1356450 | 0.867469 | 1.337842e-65 | -8.615850e-47 |
| Msa0576330 | Msa1356450 | 0.827294 | 1.693595e-54 | -8.615850e-47 |
| Msa0587180 | Msa1356450 | 0.837637 | 4.622369e-57 | -8.615850e-47 |
| Msa0591890 | Msa1356450 | 0.816808 | 4.568378e-52 | -8.615850e-47 |
| Msa0847140 | Msa1356450 | 0.804799 | 1.816439e-49 | -8.615850e-47 |
| Msa0856220 | Msa1356450 | 0.812617 | 3.874581e-51 | -8.615850e-47 |
| Msa0876340 | Msa1356450 | 0.811648 | 6.301882e-51 | -8.615850e-47 |
| Msa0876630 | Msa1356450 | 0.844972 | 5.426572e-59 | -8.615850e-47 |
| Msa0902270 | Msa1356450 | 0.813732 | 2.205176e-51 | -8.615850e-47 |
| Msa0921860 | Msa1356450 | 0.845292 | 4.447796e-59 | -8.615850e-47 |
| Msa0929900 | Msa1356450 | 0.840751 | 7.201428e-58 | -8.615850e-47 |
| Msa0930950 | Msa1356450 | -0.838165 | 3.381532e-57 | -8.615850e-47 |
| Msa0931370 | Msa1356450 | 0.827591 | 1.437855e-54 | -8.615850e-47 |
| Msa0941520 | Msa1356450 | 0.805860 | 1.088546e-49 | -8.615850e-47 |
| Msa0958830 | Msa1356450 | 0.807395 | 5.162408e-50 | -8.615850e-47 |
| Msa0970040 | Msa1356450 | 0.973546 | 1.299494e-136 | -8.615850e-47 |
| Msa0970100 | Msa1356450 | 0.895680 | 7.610243e-76 | -8.615850e-47 |
| Msa0978980 | Msa1356450 | 0.849351 | 3.418469e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356450 | MtrunA17_Chr6g0448901 | 99.020 | 510 | 5 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1042 |
| Msa1356450 | MtrunA17_Chr4g0043311 | 78.411 | 491 | 106 | 0 | 20 | 510 | 7 | 497 | 0.0 | 818 |
| Msa1356450 | MtrunA17_Chr7g0263711 | 78.004 | 491 | 108 | 0 | 20 | 510 | 10 | 500 | 0.0 | 811 |
| Msa1356450 | MtrunA17_Chr4g0043301 | 79.430 | 491 | 101 | 0 | 20 | 510 | 10 | 500 | 0.0 | 808 |
| Msa1356450 | MtrunA17_Chr7g0265591 | 43.952 | 496 | 264 | 9 | 22 | 506 | 30 | 522 | 5.18e-133 | 395 |
| Msa1356450 | MtrunA17_Chr1g0197911 | 42.828 | 495 | 270 | 7 | 22 | 506 | 30 | 521 | 1.57e-131 | 392 |
| Msa1356450 | MtrunA17_Chr1g0179541 | 43.260 | 497 | 252 | 7 | 22 | 506 | 30 | 508 | 1.19e-126 | 379 |
| Msa1356450 | MtrunA17_Chr1g0202291 | 36.875 | 480 | 260 | 12 | 21 | 492 | 104 | 548 | 1.65e-85 | 275 |
| Msa1356450 | MtrunA17_Chr5g0400361 | 36.709 | 474 | 269 | 11 | 21 | 492 | 78 | 522 | 6.54e-85 | 272 |
| Msa1356450 | MtrunA17_Chr6g0463101 | 35.967 | 481 | 263 | 12 | 21 | 492 | 106 | 550 | 5.97e-84 | 270 |
| Msa1356450 | MtrunA17_Chr1g0206791 | 32.790 | 491 | 292 | 12 | 21 | 498 | 17 | 482 | 1.73e-74 | 244 |
| Msa1356450 | MtrunA17_Chr1g0188101 | 30.862 | 499 | 290 | 11 | 21 | 495 | 90 | 557 | 5.43e-74 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356450 | AT5G08570.1 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa1356450 | AT5G08570.2 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa1356450 | AT5G08570.3 | 88.039 | 510 | 61 | 0 | 1 | 510 | 1 | 510 | 0.0 | 947 |
| Msa1356450 | AT5G63680.3 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa1356450 | AT5G63680.1 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa1356450 | AT5G63680.2 | 86.863 | 510 | 67 | 0 | 1 | 510 | 1 | 510 | 0.0 | 932 |
| Msa1356450 | AT5G56350.1 | 79.837 | 491 | 99 | 0 | 20 | 510 | 8 | 498 | 0.0 | 820 |
| Msa1356450 | AT4G26390.1 | 78.208 | 491 | 107 | 0 | 20 | 510 | 7 | 497 | 0.0 | 803 |
| Msa1356450 | AT3G04050.1 | 69.960 | 506 | 147 | 4 | 6 | 506 | 1 | 506 | 0.0 | 726 |
| Msa1356450 | AT3G55650.1 | 68.390 | 503 | 155 | 3 | 12 | 510 | 8 | 510 | 0.0 | 703 |
| Msa1356450 | AT3G25960.1 | 69.661 | 501 | 139 | 4 | 12 | 510 | 8 | 497 | 0.0 | 703 |
| Msa1356450 | AT3G55810.1 | 66.397 | 494 | 144 | 4 | 21 | 510 | 17 | 492 | 0.0 | 654 |
| Msa1356450 | AT2G36580.1 | 44.646 | 495 | 262 | 8 | 22 | 506 | 30 | 522 | 3.97e-134 | 399 |
| Msa1356450 | AT3G52990.1 | 44.444 | 495 | 263 | 8 | 22 | 506 | 30 | 522 | 8.85e-134 | 398 |
| Msa1356450 | AT3G52990.2 | 43.100 | 471 | 256 | 8 | 46 | 506 | 1 | 469 | 2.96e-123 | 369 |
| Msa1356450 | AT1G32440.1 | 39.212 | 482 | 256 | 14 | 15 | 492 | 95 | 543 | 2.26e-87 | 280 |
| Msa1356450 | AT5G52920.1 | 36.076 | 474 | 272 | 11 | 21 | 492 | 111 | 555 | 2.10e-83 | 270 |
| Msa1356450 | AT3G22960.1 | 30.769 | 494 | 295 | 11 | 21 | 495 | 118 | 583 | 5.45e-72 | 240 |
| Msa1356450 | AT3G49160.3 | 34.300 | 207 | 123 | 6 | 135 | 332 | 389 | 591 | 6.10e-20 | 93.6 |
| Msa1356450 | AT3G49160.1 | 34.300 | 207 | 123 | 6 | 135 | 332 | 477 | 679 | 6.31e-20 | 94.0 |
Find 149 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAAATTGTTTGTACTTT+GGG | 0.213355 | tig0015628:+60735 | Msa1356450:CDS |
| GAGTTTCGCTCTGGCCTTAT+TGG | 0.243879 | tig0015628:-62809 | None:intergenic |
| ACCCAAAGTACAAACAATTT+TGG | 0.262629 | tig0015628:-60736 | None:intergenic |
| CAGAGGCTTGATTCCTATAT+TGG | 0.264607 | tig0015628:+62987 | Msa1356450:CDS |
| CACAACCCTTCCTGCATCTA+AGG | 0.283588 | tig0015628:-63196 | None:intergenic |
| TGTCCTTCTTTGAGTTGAAT+AGG | 0.285375 | tig0015628:-61639 | None:intergenic |
| TATATTAAGCTGTGCCTTGC+TGG | 0.290018 | tig0015628:-62964 | None:intergenic |
| GATTTCATAATCAGTACTTA+TGG | 0.291143 | tig0015628:-61670 | None:intergenic |
| TCATTTCAAGGTTGAGAATC+AGG | 0.297800 | tig0015628:+62351 | Msa1356450:intron |
| GCTCTGAATGAACTCGGTTT+TGG | 0.298410 | tig0015628:+63315 | Msa1356450:three_prime_UTR |
| ATTTAGCTGTTAGCAGGTTT+TGG | 0.299719 | tig0015628:+63284 | Msa1356450:three_prime_UTR |
| CAGCTAAATCCTCCATTATA+TGG | 0.324721 | tig0015628:-63270 | None:intergenic |
| GTTGTTGCTCTTCATCGTAT+TGG | 0.325415 | tig0015628:+63114 | Msa1356450:CDS |
| GACCAAAATTGTTTGTACTT+TGG | 0.339741 | tig0015628:+60734 | Msa1356450:CDS |
| GCAGAATCATCCCTTGATTA+TGG | 0.346101 | tig0015628:+62703 | Msa1356450:CDS |
| TGCTGTACGCACAGCCAATA+AGG | 0.350511 | tig0015628:+62795 | Msa1356450:CDS |
| GCCAGGAAAATCTTCTCAAC+TGG | 0.350809 | tig0015628:-62454 | None:intergenic |
| GTTAATGTCCGCAAGGTTCT+CGG | 0.353104 | tig0015628:+62005 | Msa1356450:CDS |
| GCAATCATATCAATATTGTT+AGG | 0.355092 | tig0015628:-61951 | None:intergenic |
| TGCTCTTTCATTTGTTCGTA+AGG | 0.360649 | tig0015628:+61971 | Msa1356450:CDS |
| ATTTATAAGTGTAATCTTGT+TGG | 0.364853 | tig0015628:+62490 | Msa1356450:CDS |
| TGACCACAGACTCATTTGAT+TGG | 0.381256 | tig0015628:+62923 | Msa1356450:CDS |
| GCAGATCCTTCTGCCAATAT+AGG | 0.382735 | tig0015628:-63000 | None:intergenic |
| TGATCATGGATTCAAGCATC+TGG | 0.395013 | tig0015628:-62534 | None:intergenic |
| CTACATCAGTTGCTTCGGCT+CGG | 0.397785 | tig0015628:-62573 | None:intergenic |
| GAGCATAGAATGGTATTTCC+AGG | 0.403423 | tig0015628:-61750 | None:intergenic |
| TGCTGGTGCCTCATCACTGC+AGG | 0.408792 | tig0015628:-62947 | None:intergenic |
| GCGTGAGACTGATGCGTTCA+TGG | 0.409117 | tig0015628:+62402 | Msa1356450:CDS |
| AGACTTTCCAATGGACTCAT+AGG | 0.415998 | tig0015628:-62763 | None:intergenic |
| CGGACTGGCTTTCTGAAAGA+TGG | 0.416803 | tig0015628:+61612 | Msa1356450:CDS |
| ATGGTGGCCCGTGGTGATCT+TGG | 0.421038 | tig0015628:+62421 | Msa1356450:CDS |
| TAACTCATTGATATCATCTC+TGG | 0.422361 | tig0015628:-61702 | None:intergenic |
| AGAATCTACAGATGCAATTC+TGG | 0.426172 | tig0015628:+63038 | Msa1356450:CDS |
| TAAGGAAGATATTCTTGAAT+GGG | 0.428016 | tig0015628:+61923 | Msa1356450:CDS |
| TACATCAGTTGCTTCGGCTC+GGG | 0.429321 | tig0015628:-62572 | None:intergenic |
| GCTGTTTGTCCACCATATAA+TGG | 0.435925 | tig0015628:+63258 | Msa1356450:three_prime_UTR |
| CTTAAGTCAGCAACACAAAA+GGG | 0.437722 | tig0015628:+63069 | Msa1356450:CDS |
| AATCTTGTCTGTGGTAGTTC+CGG | 0.438220 | tig0015628:+62897 | Msa1356450:CDS |
| CTGCCTGTCCACTTGAAGCC+TGG | 0.442454 | tig0015628:+61732 | Msa1356450:CDS |
| CACGACCATCGTTTGGTAGT+TGG | 0.447300 | tig0015628:-60704 | None:intergenic |
| AGAAAGCCAGTCCGAATCTC+AGG | 0.453908 | tig0015628:-61603 | None:intergenic |
| GTAGCCAATGCAGTTCTTGA+TGG | 0.460232 | tig0015628:+62592 | Msa1356450:CDS |
| TGAATATAGCACCATAATCA+AGG | 0.462445 | tig0015628:-62714 | None:intergenic |
| AATGAGTCTGTGGTCAAAAC+CGG | 0.463086 | tig0015628:-62916 | None:intergenic |
| CTGTCAAAACTCTGCAATGT+TGG | 0.465660 | tig0015628:+61836 | Msa1356450:CDS |
| AAGTACTGATTATGAAATCA+AGG | 0.465812 | tig0015628:+61674 | Msa1356450:CDS |
| TCTTAAGTCAGCAACACAAA+AGG | 0.468356 | tig0015628:+63068 | Msa1356450:CDS |
| ATTGGCTACATCAGTTGCTT+CGG | 0.471027 | tig0015628:-62578 | None:intergenic |
| TGGAGGATTTAGCTGTTAGC+AGG | 0.473680 | tig0015628:+63278 | Msa1356450:three_prime_UTR |
| CCAAGTTAGTTGCTAAGTAT+AGG | 0.476764 | tig0015628:+62863 | Msa1356450:CDS |
| TTAGGAACACGACCATCGTT+TGG | 0.481093 | tig0015628:-60711 | None:intergenic |
| CAAAAGGGGCTTTGTAAACC+TGG | 0.486157 | tig0015628:+63084 | Msa1356450:CDS |
| TCCATTGCCTATGAGTCCAT+TGG | 0.486716 | tig0015628:+62756 | Msa1356450:CDS |
| CAGGGGCCTGAGATTCGGAC+TGG | 0.487007 | tig0015628:+61597 | Msa1356450:intron |
| TATTAGCTGGCCTTAGATGC+AGG | 0.487598 | tig0015628:+63186 | Msa1356450:three_prime_UTR |
| TTAATGTCCGCAAGGTTCTC+GGG | 0.488664 | tig0015628:+62006 | Msa1356450:CDS |
| GGAACTACCACAGACAAGAT+TGG | 0.490094 | tig0015628:-62895 | None:intergenic |
| ATTTAAAATGCAAGAAATGC+AGG | 0.490707 | tig0015628:-63387 | None:intergenic |
| GCTTCGGCTCGGGTTGGCCG+AGG | 0.492369 | tig0015628:-62562 | None:intergenic |
| TGTCAAAACTCTGCAATGTT+GGG | 0.494616 | tig0015628:+61837 | Msa1356450:CDS |
| ATAAGGAAGATATTCTTGAA+TGG | 0.496374 | tig0015628:+61922 | Msa1356450:CDS |
| CACTCTTACTGACAAGGATA+AGG | 0.497352 | tig0015628:+61905 | Msa1356450:CDS |
| CTTATCCTTGTCAGTAAGAG+TGG | 0.498847 | tig0015628:-61904 | None:intergenic |
| ACCGACTGTGTCATGCTTAG+TGG | 0.500132 | tig0015628:+62616 | Msa1356450:CDS |
| CTATATTCAAAGAGATGATA+AGG | 0.502593 | tig0015628:+62728 | Msa1356450:CDS |
| GGAAGATCCACCACAACACC+AGG | 0.502856 | tig0015628:-61882 | None:intergenic |
| TGGAAATACCATTCTATGCT+CGG | 0.505725 | tig0015628:+61752 | Msa1356450:CDS |
| TTTCCAGGCTTCAAGTGGAC+AGG | 0.509567 | tig0015628:-61735 | None:intergenic |
| CTTAGTGGTGAAAGTGCTGC+TGG | 0.513325 | tig0015628:+62631 | Msa1356450:CDS |
| CAATCATATCAATATTGTTA+GGG | 0.517496 | tig0015628:-61950 | None:intergenic |
| GCTCTTTCATTTGTTCGTAA+GGG | 0.518972 | tig0015628:+61972 | Msa1356450:CDS |
| TGGTACTCATGAATATCATC+AGG | 0.520603 | tig0015628:+60836 | Msa1356450:CDS |
| TGAACTTGCTGTCAAAATCA+TGG | 0.526619 | tig0015628:+62663 | Msa1356450:CDS |
| CACGACAATGAGTTTCGCTC+TGG | 0.526714 | tig0015628:-62818 | None:intergenic |
| AAGTCTGCTATGCATTCTAC+TGG | 0.527158 | tig0015628:+60876 | Msa1356450:CDS |
| TGTTCCATCCGAGCATAGAA+TGG | 0.527240 | tig0015628:-61760 | None:intergenic |
| TTCCATTCCAAGATCACCAC+GGG | 0.528799 | tig0015628:-62428 | None:intergenic |
| ATGTCGAACATAGACATTGA+AGG | 0.535384 | tig0015628:+60672 | Msa1356450:CDS |
| ATCTCAACAGATCTCGAAGC+AGG | 0.538705 | tig0015628:-60759 | None:intergenic |
| ACAGACAAGATTGGAACTGC+TGG | 0.538859 | tig0015628:-62886 | None:intergenic |
| CCAGGAAAATCTTCTCAACT+GGG | 0.540531 | tig0015628:-62453 | None:intergenic |
| CCTATACTTAGCAACTAACT+TGG | 0.544461 | tig0015628:-62863 | None:intergenic |
| AAACCTATTCAACTCAAAGA+AGG | 0.544786 | tig0015628:+61636 | Msa1356450:CDS |
| TGGCCGAGGAGACTTGATCA+TGG | 0.546979 | tig0015628:-62548 | None:intergenic |
| TCAGTTGCTTCGGCTCGGGT+TGG | 0.547204 | tig0015628:-62568 | None:intergenic |
| ATCTGGGTAGCAGTCACCAC+AGG | 0.548128 | tig0015628:-62517 | None:intergenic |
| CAATCTCCCTGGTGTTGTGG+TGG | 0.549734 | tig0015628:+61875 | Msa1356450:CDS |
| TTGTCCTGTGATCAAGAAGC+CGG | 0.554022 | tig0015628:+61798 | Msa1356450:CDS |
| TAACTACTGAAGCGGTGGGT+GGG | 0.554952 | tig0015628:+60613 | Msa1356450:five_prime_UTR |
| TGGTATTTCCAGGCTTCAAG+TGG | 0.557830 | tig0015628:-61740 | None:intergenic |
| ACTCTGCAATGTTGGGTGAG+AGG | 0.560793 | tig0015628:+61844 | Msa1356450:CDS |
| AGAGCAACAACGGCGTCACC+AGG | 0.569748 | tig0015628:-63102 | None:intergenic |
| GGTTCCATCAAGAACTGCAT+TGG | 0.573593 | tig0015628:-62596 | None:intergenic |
| ACAGCGACATCTAACAGTAC+CGG | 0.574440 | tig0015628:-61817 | None:intergenic |
| GCATATTCAGTTGATGTCAA+AGG | 0.575993 | tig0015628:+62040 | Msa1356450:CDS |
| AGCTGGCCTTAGATGCAGGA+AGG | 0.577448 | tig0015628:+63190 | Msa1356450:three_prime_UTR |
| TCCAATGGACTCATAGGCAA+TGG | 0.578303 | tig0015628:-62757 | None:intergenic |
| TTGATTCCTATATTGGCAGA+AGG | 0.579355 | tig0015628:+62994 | Msa1356450:CDS |
| GAAACGAGCAACATTCATGC+CGG | 0.580143 | tig0015628:-60802 | None:intergenic |
| AGCAGACTTGAGATTATCGA+GGG | 0.582018 | tig0015628:-60862 | None:intergenic |
| TGTCAATCTCCCTGGTGTTG+TGG | 0.583872 | tig0015628:+61872 | Msa1356450:CDS |
| ATGCACAATGTGTTATTAGC+TGG | 0.586719 | tig0015628:+63173 | Msa1356450:exon |
| TGTCGAACATAGACATTGAA+GGG | 0.588964 | tig0015628:+60673 | Msa1356450:CDS |
| TAGCTAACTACTGAAGCGGT+GGG | 0.588983 | tig0015628:+60609 | Msa1356450:five_prime_UTR |
| GATCATGGATTCAAGCATCT+GGG | 0.589960 | tig0015628:-62533 | None:intergenic |
| CTCATTGTCGTGCTGACACG+AGG | 0.591073 | tig0015628:+62829 | Msa1356450:CDS |
| CTAGCTAACTACTGAAGCGG+TGG | 0.592863 | tig0015628:+60608 | Msa1356450:five_prime_UTR |
| TTATCCTTGTCAGTAAGAGT+GGG | 0.593774 | tig0015628:-61903 | None:intergenic |
| AATCCATGATCAAGTCTCCT+CGG | 0.597161 | tig0015628:+62545 | Msa1356450:CDS |
| TGATCTTGTTAATGTCCGCA+AGG | 0.600121 | tig0015628:+61998 | Msa1356450:CDS |
| AGTACTGATTATGAAATCAA+GGG | 0.602246 | tig0015628:+61675 | Msa1356450:CDS |
| CTAACTACTGAAGCGGTGGG+TGG | 0.603474 | tig0015628:+60612 | Msa1356450:five_prime_UTR |
| GGCCCGTGGTGATCTTGGAA+TGG | 0.607650 | tig0015628:+62426 | Msa1356450:CDS |
| AGCAGTTCCAATCTTGTCTG+TGG | 0.608373 | tig0015628:+62888 | Msa1356450:CDS |
| GCTGGCCTTAGATGCAGGAA+GGG | 0.608607 | tig0015628:+63191 | Msa1356450:three_prime_UTR |
| TGCCGTCATGCTCGACACCA+AGG | 0.609600 | tig0015628:+60908 | Msa1356450:CDS |
| GAATATAGCACCATAATCAA+GGG | 0.615983 | tig0015628:-62713 | None:intergenic |
| TATCTAGCTAACTACTGAAG+CGG | 0.621098 | tig0015628:+60605 | Msa1356450:five_prime_UTR |
| AAGGAAGATATTCTTGAATG+GGG | 0.623075 | tig0015628:+61924 | Msa1356450:CDS |
| TTGTCGTGCTGACACGAGGT+GGG | 0.624494 | tig0015628:+62833 | Msa1356450:CDS |
| ACCACTAAGCATGACACAGT+CGG | 0.629348 | tig0015628:-62617 | None:intergenic |
| CTAAATCCTCCATTATATGG+TGG | 0.630142 | tig0015628:-63267 | None:intergenic |
| TTCAAGGTTGAGAATCAGGA+GGG | 0.631704 | tig0015628:+62355 | Msa1356450:intron |
| AGTACCGGCTTCTTGATCAC+AGG | 0.634918 | tig0015628:-61802 | None:intergenic |
| TTTCAAGGTTGAGAATCAGG+AGG | 0.635083 | tig0015628:+62354 | Msa1356450:intron |
| GTTTGTCCACCATATAATGG+AGG | 0.635293 | tig0015628:+63261 | Msa1356450:three_prime_UTR |
| TTAAGTCAGCAACACAAAAG+GGG | 0.635960 | tig0015628:+63070 | Msa1356450:CDS |
| GATGCGTTCATGGTGGCCCG+TGG | 0.637855 | tig0015628:+62412 | Msa1356450:CDS |
| AACTGAATATGCTTAGCATG+TGG | 0.639472 | tig0015628:-62029 | None:intergenic |
| ATTGTCGTGCTGACACGAGG+TGG | 0.639978 | tig0015628:+62832 | Msa1356450:CDS |
| GATGATGCAAGACTTTCCAA+TGG | 0.640580 | tig0015628:-62772 | None:intergenic |
| GGTCCAATCAAATGAGTCTG+TGG | 0.640580 | tig0015628:-62926 | None:intergenic |
| AATACCATTCTATGCTCGGA+TGG | 0.643051 | tig0015628:+61756 | Msa1356450:CDS |
| TAGCAGACTTGAGATTATCG+AGG | 0.648969 | tig0015628:-60863 | None:intergenic |
| AACCTTGGTGTCGAGCATGA+CGG | 0.653974 | tig0015628:-60910 | None:intergenic |
| TGATTGGACCTGCAGTGATG+AGG | 0.656525 | tig0015628:+62939 | Msa1356450:CDS |
| TCTTCCCACTCTTACTGACA+AGG | 0.660905 | tig0015628:+61899 | Msa1356450:CDS |
| TGACATAGACATACCTTTGG+GGG | 0.661174 | tig0015628:-60491 | None:intergenic |
| ATGACATAGACATACCTTTG+GGG | 0.672202 | tig0015628:-60492 | None:intergenic |
| GCAGTGATGAGGCACCAGCA+AGG | 0.676635 | tig0015628:+62950 | Msa1356450:CDS |
| AATACGATGAAGAGCAACAA+CGG | 0.684681 | tig0015628:-63112 | None:intergenic |
| TAATCTTGTTGGCAAGCCTG+TGG | 0.690354 | tig0015628:+62501 | Msa1356450:CDS |
| AGGCACAGCTTAATATACAG+AGG | 0.690557 | tig0015628:+62970 | Msa1356450:CDS |
| TTTCCATTCCAAGATCACCA+CGG | 0.695446 | tig0015628:-62429 | None:intergenic |
| TTGAACCAACTACCAAACGA+TGG | 0.710339 | tig0015628:+60699 | Msa1356450:CDS |
| TGAACGCATCAGTCTCACGC+AGG | 0.710992 | tig0015628:-62399 | None:intergenic |
| TGAGACTGATGCGTTCATGG+TGG | 0.741662 | tig0015628:+62405 | Msa1356450:CDS |
| GAAGATCCACCACAACACCA+GGG | 0.757023 | tig0015628:-61881 | None:intergenic |
| CATGTGGCCCGAGAACCTTG+CGG | 0.783590 | tig0015628:-62013 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTAATAATGATATAA+AGG | + | tig0015628:62087-62106 | Msa1356450:intron | 10.0% |
| !!! | GTTTTTAAATAATGATTTTG+TGG | + | tig0015628:62324-62343 | Msa1356450:intron | 15.0% |
| !!! | AATCAATTTTGTGTTTAATC+AGG | + | tig0015628:61109-61128 | Msa1356450:intron | 20.0% |
| !! | TTGAAAAGTTGTTAATTGAA+GGG | - | tig0015628:61141-61160 | None:intergenic | 20.0% |
| !! | TTTGAAAAGTTGTTAATTGA+AGG | - | tig0015628:61142-61161 | None:intergenic | 20.0% |
| !!! | ATTATTAACGTTTTCATGTA+CGG | + | tig0015628:61545-61564 | Msa1356450:intron | 20.0% |
| !! | CAATCATATCAATATTGTTA+GGG | - | tig0015628:61953-61972 | None:intergenic | 20.0% |
| !! | ATTTATAAGTGTAATCTTGT+TGG | + | tig0015628:62490-62509 | Msa1356450:CDS | 20.0% |
| !!! | CATTTTAAATGACATTTTTG+TGG | + | tig0015628:63400-63419 | Msa1356450:three_prime_UTR | 20.0% |
| ! | ACCAAAATTGTTTGTACTTT+GGG | + | tig0015628:60735-60754 | Msa1356450:CDS | 25.0% |
| ! | ATTCAAAAACTTCTTAAAGC+CGG | + | tig0015628:60783-60802 | Msa1356450:CDS | 25.0% |
| ! | TAGCAATAAAATAGTCTGTA+AGG | - | tig0015628:61466-61485 | None:intergenic | 25.0% |
| ! | GATTTCATAATCAGTACTTA+TGG | - | tig0015628:61673-61692 | None:intergenic | 25.0% |
| !!! | AAGTACTGATTATGAAATCA+AGG | + | tig0015628:61674-61693 | Msa1356450:CDS | 25.0% |
| !!! | AGTACTGATTATGAAATCAA+GGG | + | tig0015628:61675-61694 | Msa1356450:CDS | 25.0% |
| ! | ATAAGGAAGATATTCTTGAA+TGG | + | tig0015628:61922-61941 | Msa1356450:CDS | 25.0% |
| ! | TAAGGAAGATATTCTTGAAT+GGG | + | tig0015628:61923-61942 | Msa1356450:CDS | 25.0% |
| ! | GCAATCATATCAATATTGTT+AGG | - | tig0015628:61954-61973 | None:intergenic | 25.0% |
| ! | CATTAGAAGATATATCAACA+AGG | - | tig0015628:62175-62194 | None:intergenic | 25.0% |
| ! | TCATATTAAACAGACAATCA+TGG | - | tig0015628:62246-62265 | None:intergenic | 25.0% |
| !! | TTTTGTGGAATTTCATTTCA+AGG | + | tig0015628:62339-62358 | Msa1356450:intron | 25.0% |
| ! | CTATATTCAAAGAGATGATA+AGG | + | tig0015628:62728-62747 | Msa1356450:CDS | 25.0% |
| !! | ATTTAAAATGCAAGAAATGC+AGG | - | tig0015628:63390-63409 | None:intergenic | 25.0% |
| AATGACATAGACATACCTTT+GGG | - | tig0015628:60496-60515 | None:intergenic | 30.0% | |
| !! | GTACAAACAATTTTGGTCTT+AGG | - | tig0015628:60732-60751 | None:intergenic | 30.0% |
| GACCAAAATTGTTTGTACTT+TGG | + | tig0015628:60734-60753 | Msa1356450:CDS | 30.0% | |
| ! | ACCCAAAGTACAAACAATTT+TGG | - | tig0015628:60739-60758 | None:intergenic | 30.0% |
| ATAGAAACAAGAACAAACCT+TGG | - | tig0015628:60928-60947 | None:intergenic | 30.0% | |
| AAATATGTTGAATGCAAGCA+GGG | - | tig0015628:60978-60997 | None:intergenic | 30.0% | |
| TAAATATGTTGAATGCAAGC+AGG | - | tig0015628:60979-60998 | None:intergenic | 30.0% | |
| ! | TTGAACAAGTGATTTGTGTT+TGG | + | tig0015628:61040-61059 | Msa1356450:intron | 30.0% |
| !!! | TTTTTTGTCTGTAGACAAAG+TGG | + | tig0015628:61363-61382 | Msa1356450:intron | 30.0% |
| AAGAGAATCATAACTGTACA+AGG | - | tig0015628:61493-61512 | None:intergenic | 30.0% | |
| AAACCTATTCAACTCAAAGA+AGG | + | tig0015628:61636-61655 | Msa1356450:CDS | 30.0% | |
| TAACTCATTGATATCATCTC+TGG | - | tig0015628:61705-61724 | None:intergenic | 30.0% | |
| AAGGAAGATATTCTTGAATG+GGG | + | tig0015628:61924-61943 | Msa1356450:CDS | 30.0% | |
| ATCACCATTTCATTTGTTTG+TGG | + | tig0015628:62110-62129 | Msa1356450:intron | 30.0% | |
| AACACCACAAACAAATGAAA+TGG | - | tig0015628:62117-62136 | None:intergenic | 30.0% | |
| TGCAATTCATTAATGGTGAA+GGG | - | tig0015628:62149-62168 | None:intergenic | 30.0% | |
| ATGCAATTCATTAATGGTGA+AGG | - | tig0015628:62150-62169 | None:intergenic | 30.0% | |
| AAGGACATGCAATTCATTAA+TGG | - | tig0015628:62156-62175 | None:intergenic | 30.0% | |
| GAATATAGCACCATAATCAA+GGG | - | tig0015628:62716-62735 | None:intergenic | 30.0% | |
| TGAATATAGCACCATAATCA+AGG | - | tig0015628:62717-62736 | None:intergenic | 30.0% | |
| !! | TATTTTGCTCTGAATGAACT+CGG | + | tig0015628:63309-63328 | Msa1356450:three_prime_UTR | 30.0% |
| ATGACATAGACATACCTTTG+GGG | - | tig0015628:60495-60514 | None:intergenic | 35.0% | |
| CAATGACATAGACATACCTT+TGG | - | tig0015628:60497-60516 | None:intergenic | 35.0% | |
| TATCTAGCTAACTACTGAAG+CGG | + | tig0015628:60605-60624 | Msa1356450:five_prime_UTR | 35.0% | |
| ATGTCGAACATAGACATTGA+AGG | + | tig0015628:60672-60691 | Msa1356450:CDS | 35.0% | |
| TGTCGAACATAGACATTGAA+GGG | + | tig0015628:60673-60692 | Msa1356450:CDS | 35.0% | |
| ! | GCTCGTTTCAATTTTTCACA+TGG | + | tig0015628:60816-60835 | Msa1356450:CDS | 35.0% |
| TGGTACTCATGAATATCATC+AGG | + | tig0015628:60836-60855 | Msa1356450:CDS | 35.0% | |
| TTTCTATACATGCATAGCAC+AGG | + | tig0015628:60941-60960 | Msa1356450:intron | 35.0% | |
| TTCTATACATGCATAGCACA+GGG | + | tig0015628:60942-60961 | Msa1356450:intron | 35.0% | |
| !!! | TTTTTTGTCTGTAGACAACG+CGG | - | tig0015628:61287-61306 | None:intergenic | 35.0% |
| !!! | TCTACTGTACTGTTTTTGCA+GGG | + | tig0015628:61579-61598 | Msa1356450:intron | 35.0% |
| !! | TGTCCTTCTTTGAGTTGAAT+AGG | - | tig0015628:61642-61661 | None:intergenic | 35.0% |
| TGGAAATACCATTCTATGCT+CGG | + | tig0015628:61752-61771 | Msa1356450:CDS | 35.0% | |
| TGTCAAAACTCTGCAATGTT+GGG | + | tig0015628:61837-61856 | Msa1356450:CDS | 35.0% | |
| TTATCCTTGTCAGTAAGAGT+GGG | - | tig0015628:61906-61925 | None:intergenic | 35.0% | |
| TGCTCTTTCATTTGTTCGTA+AGG | + | tig0015628:61971-61990 | Msa1356450:CDS | 35.0% | |
| GCTCTTTCATTTGTTCGTAA+GGG | + | tig0015628:61972-61991 | Msa1356450:CDS | 35.0% | |
| AACTGAATATGCTTAGCATG+TGG | - | tig0015628:62032-62051 | None:intergenic | 35.0% | |
| ! | GCATATTCAGTTGATGTCAA+AGG | + | tig0015628:62040-62059 | Msa1356450:CDS | 35.0% |
| CAATTCATTAATGGTGAAGG+GGG | - | tig0015628:62147-62166 | None:intergenic | 35.0% | |
| GCAATTCATTAATGGTGAAG+GGG | - | tig0015628:62148-62167 | None:intergenic | 35.0% | |
| ATTAAGCACGACTTCAGAAT+TGG | - | tig0015628:62303-62322 | None:intergenic | 35.0% | |
| !! | AATTCTGAAGTCGTGCTTAA+TGG | + | tig0015628:62302-62321 | Msa1356450:intron | 35.0% |
| TCATTTCAAGGTTGAGAATC+AGG | + | tig0015628:62351-62370 | Msa1356450:intron | 35.0% | |
| ! | AAATCATCATTTTCTGTGCC+AGG | - | tig0015628:62474-62493 | None:intergenic | 35.0% |
| !! | TGATTTTGACAGCAAGTTCA+GGG | - | tig0015628:62663-62682 | None:intergenic | 35.0% |
| !! | ATGATTTTGACAGCAAGTTC+AGG | - | tig0015628:62664-62683 | None:intergenic | 35.0% |
| !! | TGAACTTGCTGTCAAAATCA+TGG | + | tig0015628:62663-62682 | Msa1356450:CDS | 35.0% |
| CCTATACTTAGCAACTAACT+TGG | - | tig0015628:62866-62885 | None:intergenic | 35.0% | |
| CCAAGTTAGTTGCTAAGTAT+AGG | + | tig0015628:62863-62882 | Msa1356450:CDS | 35.0% | |
| TTGATTCCTATATTGGCAGA+AGG | + | tig0015628:62994-63013 | Msa1356450:CDS | 35.0% | |
| AGAATCTACAGATGCAATTC+TGG | + | tig0015628:63038-63057 | Msa1356450:CDS | 35.0% | |
| TCTTAAGTCAGCAACACAAA+AGG | + | tig0015628:63068-63087 | Msa1356450:CDS | 35.0% | |
| CTTAAGTCAGCAACACAAAA+GGG | + | tig0015628:63069-63088 | Msa1356450:CDS | 35.0% | |
| TTAAGTCAGCAACACAAAAG+GGG | + | tig0015628:63070-63089 | Msa1356450:CDS | 35.0% | |
| AATACGATGAAGAGCAACAA+CGG | - | tig0015628:63115-63134 | None:intergenic | 35.0% | |
| ! | ATGCACAATGTGTTATTAGC+TGG | + | tig0015628:63173-63192 | Msa1356450:exon | 35.0% |
| CTAAATCCTCCATTATATGG+TGG | - | tig0015628:63270-63289 | None:intergenic | 35.0% | |
| CAGCTAAATCCTCCATTATA+TGG | - | tig0015628:63273-63292 | None:intergenic | 35.0% | |
| ! | ATTTAGCTGTTAGCAGGTTT+TGG | + | tig0015628:63284-63303 | Msa1356450:three_prime_UTR | 35.0% |
| TGACATAGACATACCTTTGG+GGG | - | tig0015628:60494-60513 | None:intergenic | 40.0% | |
| TTGAACCAACTACCAAACGA+TGG | + | tig0015628:60699-60718 | Msa1356450:CDS | 40.0% | |
| AGCAGACTTGAGATTATCGA+GGG | - | tig0015628:60865-60884 | None:intergenic | 40.0% | |
| TAGCAGACTTGAGATTATCG+AGG | - | tig0015628:60866-60885 | None:intergenic | 40.0% | |
| AAGTCTGCTATGCATTCTAC+TGG | + | tig0015628:60876-60895 | Msa1356450:CDS | 40.0% | |
| ATTGTCAATACATCCTCACC+TGG | + | tig0015628:61210-61229 | Msa1356450:intron | 40.0% | |
| TTGTCAATACATCCTCACCT+GGG | + | tig0015628:61211-61230 | Msa1356450:intron | 40.0% | |
| CCTCAGCAACATGATATTGA+TGG | - | tig0015628:61318-61337 | None:intergenic | 40.0% | |
| CCATCAATATCATGTTGCTG+AGG | + | tig0015628:61315-61334 | Msa1356450:intron | 40.0% | |
| TCGTTTGTGTGACTTTCAAG+TGG | - | tig0015628:61403-61422 | None:intergenic | 40.0% | |
| AAGTCACACAAACGACTGTA+AGG | + | tig0015628:61408-61427 | Msa1356450:intron | 40.0% | |
| !!! | CTCTACTGTACTGTTTTTGC+AGG | + | tig0015628:61578-61597 | Msa1356450:intron | 40.0% |
| !!! | CTACTGTACTGTTTTTGCAG+GGG | + | tig0015628:61580-61599 | Msa1356450:intron | 40.0% |
| GAGCATAGAATGGTATTTCC+AGG | - | tig0015628:61753-61772 | None:intergenic | 40.0% | |
| AATACCATTCTATGCTCGGA+TGG | + | tig0015628:61756-61775 | Msa1356450:CDS | 40.0% | |
| CTGTCAAAACTCTGCAATGT+TGG | + | tig0015628:61836-61855 | Msa1356450:CDS | 40.0% | |
| AGGAAAAATGTCAATCTCCC+TGG | + | tig0015628:61864-61883 | Msa1356450:CDS | 40.0% | |
| CTTATCCTTGTCAGTAAGAG+TGG | - | tig0015628:61907-61926 | None:intergenic | 40.0% | |
| CACTCTTACTGACAAGGATA+AGG | + | tig0015628:61905-61924 | Msa1356450:CDS | 40.0% | |
| TGATCTTGTTAATGTCCGCA+AGG | + | tig0015628:61998-62017 | Msa1356450:CDS | 40.0% | |
| TTTCAAGGTTGAGAATCAGG+AGG | + | tig0015628:62354-62373 | Msa1356450:intron | 40.0% | |
| TTCAAGGTTGAGAATCAGGA+GGG | + | tig0015628:62355-62374 | Msa1356450:intron | 40.0% | |
| TTTCCATTCCAAGATCACCA+CGG | - | tig0015628:62432-62451 | None:intergenic | 40.0% | |
| CCAGGAAAATCTTCTCAACT+GGG | - | tig0015628:62456-62475 | None:intergenic | 40.0% | |
| GATCATGGATTCAAGCATCT+GGG | - | tig0015628:62536-62555 | None:intergenic | 40.0% | |
| TGATCATGGATTCAAGCATC+TGG | - | tig0015628:62537-62556 | None:intergenic | 40.0% | |
| AATCCATGATCAAGTCTCCT+CGG | + | tig0015628:62545-62564 | Msa1356450:CDS | 40.0% | |
| ATTGGCTACATCAGTTGCTT+CGG | - | tig0015628:62581-62600 | None:intergenic | 40.0% | |
| GCAGAATCATCCCTTGATTA+TGG | + | tig0015628:62703-62722 | Msa1356450:CDS | 40.0% | |
| ! | AGACTTTCCAATGGACTCAT+AGG | - | tig0015628:62766-62785 | None:intergenic | 40.0% |
| GATGATGCAAGACTTTCCAA+TGG | - | tig0015628:62775-62794 | None:intergenic | 40.0% | |
| AATCTTGTCTGTGGTAGTTC+CGG | + | tig0015628:62897-62916 | Msa1356450:CDS | 40.0% | |
| AATGAGTCTGTGGTCAAAAC+CGG | - | tig0015628:62919-62938 | None:intergenic | 40.0% | |
| TGACCACAGACTCATTTGAT+TGG | + | tig0015628:62923-62942 | Msa1356450:CDS | 40.0% | |
| TATATTAAGCTGTGCCTTGC+TGG | - | tig0015628:62967-62986 | None:intergenic | 40.0% | |
| AGGCACAGCTTAATATACAG+AGG | + | tig0015628:62970-62989 | Msa1356450:CDS | 40.0% | |
| CAGAGGCTTGATTCCTATAT+TGG | + | tig0015628:62987-63006 | Msa1356450:CDS | 40.0% | |
| GTTGTTGCTCTTCATCGTAT+TGG | + | tig0015628:63114-63133 | Msa1356450:CDS | 40.0% | |
| GCTGTTTGTCCACCATATAA+TGG | + | tig0015628:63258-63277 | Msa1356450:three_prime_UTR | 40.0% | |
| GTTTGTCCACCATATAATGG+AGG | + | tig0015628:63261-63280 | Msa1356450:three_prime_UTR | 40.0% | |
| TAGCTAACTACTGAAGCGGT+GGG | + | tig0015628:60609-60628 | Msa1356450:five_prime_UTR | 45.0% | |
| TTAGGAACACGACCATCGTT+TGG | - | tig0015628:60714-60733 | None:intergenic | 45.0% | |
| ATCTCAACAGATCTCGAAGC+AGG | - | tig0015628:60762-60781 | None:intergenic | 45.0% | |
| GAAACGAGCAACATTCATGC+CGG | - | tig0015628:60805-60824 | None:intergenic | 45.0% | |
| ACAAACGACTGTAAGGTCCT+AGG | + | tig0015628:61415-61434 | Msa1356450:intron | 45.0% | |
| AAGGTTTGACACCTTCACCT+GGG | - | tig0015628:61447-61466 | None:intergenic | 45.0% | |
| TAAGGTTTGACACCTTCACC+TGG | - | tig0015628:61448-61467 | None:intergenic | 45.0% | |
| TGGTATTTCCAGGCTTCAAG+TGG | - | tig0015628:61743-61762 | None:intergenic | 45.0% | |
| TGTTCCATCCGAGCATAGAA+TGG | - | tig0015628:61763-61782 | None:intergenic | 45.0% | |
| TTGTCCTGTGATCAAGAAGC+CGG | + | tig0015628:61798-61817 | Msa1356450:CDS | 45.0% | |
| ACAGCGACATCTAACAGTAC+CGG | - | tig0015628:61820-61839 | None:intergenic | 45.0% | |
| TCTTCCCACTCTTACTGACA+AGG | + | tig0015628:61899-61918 | Msa1356450:CDS | 45.0% | |
| GTTAATGTCCGCAAGGTTCT+CGG | + | tig0015628:62005-62024 | Msa1356450:CDS | 45.0% | |
| TTAATGTCCGCAAGGTTCTC+GGG | + | tig0015628:62006-62025 | Msa1356450:CDS | 45.0% | |
| TTCCATTCCAAGATCACCAC+GGG | - | tig0015628:62431-62450 | None:intergenic | 45.0% | |
| ! | CCCAGTTGAGAAGATTTTCC+TGG | + | tig0015628:62453-62472 | Msa1356450:CDS | 45.0% |
| GCCAGGAAAATCTTCTCAAC+TGG | - | tig0015628:62457-62476 | None:intergenic | 45.0% | |
| TAATCTTGTTGGCAAGCCTG+TGG | + | tig0015628:62501-62520 | Msa1356450:CDS | 45.0% | |
| GTAGCCAATGCAGTTCTTGA+TGG | + | tig0015628:62592-62611 | Msa1356450:CDS | 45.0% | |
| GGTTCCATCAAGAACTGCAT+TGG | - | tig0015628:62599-62618 | None:intergenic | 45.0% | |
| ACCACTAAGCATGACACAGT+CGG | - | tig0015628:62620-62639 | None:intergenic | 45.0% | |
| TCCATTGCCTATGAGTCCAT+TGG | + | tig0015628:62756-62775 | Msa1356450:CDS | 45.0% | |
| ! | TCCAATGGACTCATAGGCAA+TGG | - | tig0015628:62760-62779 | None:intergenic | 45.0% |
| ACAGACAAGATTGGAACTGC+TGG | - | tig0015628:62889-62908 | None:intergenic | 45.0% | |
| AGCAGTTCCAATCTTGTCTG+TGG | + | tig0015628:62888-62907 | Msa1356450:CDS | 45.0% | |
| GGAACTACCACAGACAAGAT+TGG | - | tig0015628:62898-62917 | None:intergenic | 45.0% | |
| GGTCCAATCAAATGAGTCTG+TGG | - | tig0015628:62929-62948 | None:intergenic | 45.0% | |
| GCAGATCCTTCTGCCAATAT+AGG | - | tig0015628:63003-63022 | None:intergenic | 45.0% | |
| ! | CAAAAGGGGCTTTGTAAACC+TGG | + | tig0015628:63084-63103 | Msa1356450:CDS | 45.0% |
| !! | TATTAGCTGGCCTTAGATGC+AGG | + | tig0015628:63186-63205 | Msa1356450:three_prime_UTR | 45.0% |
| TGGAGGATTTAGCTGTTAGC+AGG | + | tig0015628:63278-63297 | Msa1356450:three_prime_UTR | 45.0% | |
| !! | GCTCTGAATGAACTCGGTTT+TGG | + | tig0015628:63315-63334 | Msa1356450:three_prime_UTR | 45.0% |
| ! | ATAGACATACCTTTGGGGGC+TGG | - | tig0015628:60490-60509 | None:intergenic | 50.0% |
| CTAGCTAACTACTGAAGCGG+TGG | + | tig0015628:60608-60627 | Msa1356450:five_prime_UTR | 50.0% | |
| TAACTACTGAAGCGGTGGGT+GGG | + | tig0015628:60613-60632 | Msa1356450:five_prime_UTR | 50.0% | |
| ! | CACGACCATCGTTTGGTAGT+TGG | - | tig0015628:60707-60726 | None:intergenic | 50.0% |
| !! | AACCTTGGTGTCGAGCATGA+CGG | - | tig0015628:60913-60932 | None:intergenic | 50.0% |
| GAGATTGTGGGTACAAACCC+AGG | - | tig0015628:61231-61250 | None:intergenic | 50.0% | |
| ACGCACAACTGCGAGATTGT+GGG | - | tig0015628:61243-61262 | None:intergenic | 50.0% | |
| ! | AAGGTCCTAGGTTCTAACCC+AGG | + | tig0015628:61427-61446 | Msa1356450:intron | 50.0% |
| ! | CTTCACCTGGGTTAGAACCT+AGG | - | tig0015628:61435-61454 | None:intergenic | 50.0% |
| ! | CTAGGTTCTAACCCAGGTGA+AGG | + | tig0015628:61433-61452 | Msa1356450:intron | 50.0% |
| ! | TTTTGCAGGGGCCTGAGATT+CGG | + | tig0015628:61592-61611 | Msa1356450:intron | 50.0% |
| AGAAAGCCAGTCCGAATCTC+AGG | - | tig0015628:61606-61625 | None:intergenic | 50.0% | |
| !! | CGGACTGGCTTTCTGAAAGA+TGG | + | tig0015628:61612-61631 | Msa1356450:CDS | 50.0% |
| TTTCCAGGCTTCAAGTGGAC+AGG | - | tig0015628:61738-61757 | None:intergenic | 50.0% | |
| !! | AGTACCGGCTTCTTGATCAC+AGG | - | tig0015628:61805-61824 | None:intergenic | 50.0% |
| ACTCTGCAATGTTGGGTGAG+AGG | + | tig0015628:61844-61863 | Msa1356450:CDS | 50.0% | |
| ! | TGTCAATCTCCCTGGTGTTG+TGG | + | tig0015628:61872-61891 | Msa1356450:CDS | 50.0% |
| GAAGATCCACCACAACACCA+GGG | - | tig0015628:61884-61903 | None:intergenic | 50.0% | |
| TGAGACTGATGCGTTCATGG+TGG | + | tig0015628:62405-62424 | Msa1356450:CDS | 50.0% | |
| TACATCAGTTGCTTCGGCTC+GGG | - | tig0015628:62575-62594 | None:intergenic | 50.0% | |
| CTACATCAGTTGCTTCGGCT+CGG | - | tig0015628:62576-62595 | None:intergenic | 50.0% | |
| ACCGACTGTGTCATGCTTAG+TGG | + | tig0015628:62616-62635 | Msa1356450:CDS | 50.0% | |
| !! | CTTAGTGGTGAAAGTGCTGC+TGG | + | tig0015628:62631-62650 | Msa1356450:CDS | 50.0% |
| TGCTGTACGCACAGCCAATA+AGG | + | tig0015628:62795-62814 | Msa1356450:CDS | 50.0% | |
| !! | GAGTTTCGCTCTGGCCTTAT+TGG | - | tig0015628:62812-62831 | None:intergenic | 50.0% |
| CACGACAATGAGTTTCGCTC+TGG | - | tig0015628:62821-62840 | None:intergenic | 50.0% | |
| TGATTGGACCTGCAGTGATG+AGG | + | tig0015628:62939-62958 | Msa1356450:CDS | 50.0% | |
| CACAACCCTTCCTGCATCTA+AGG | - | tig0015628:63199-63218 | None:intergenic | 50.0% | |
| CTAACTACTGAAGCGGTGGG+TGG | + | tig0015628:60612-60631 | Msa1356450:five_prime_UTR | 55.0% | |
| TGTGGGTACAAACCCAGGTG+AGG | - | tig0015628:61226-61245 | None:intergenic | 55.0% | |
| CACGCACAACTGCGAGATTG+TGG | - | tig0015628:61244-61263 | None:intergenic | 55.0% | |
| !! | CAATCTCCCTGGTGTTGTGG+TGG | + | tig0015628:61875-61894 | Msa1356450:CDS | 55.0% |
| GGAAGATCCACCACAACACC+AGG | - | tig0015628:61885-61904 | None:intergenic | 55.0% | |
| TGAACGCATCAGTCTCACGC+AGG | - | tig0015628:62402-62421 | None:intergenic | 55.0% | |
| GCGTGAGACTGATGCGTTCA+TGG | + | tig0015628:62402-62421 | Msa1356450:CDS | 55.0% | |
| ATCTGGGTAGCAGTCACCAC+AGG | - | tig0015628:62520-62539 | None:intergenic | 55.0% | |
| TGGCCGAGGAGACTTGATCA+TGG | - | tig0015628:62551-62570 | None:intergenic | 55.0% | |
| ! | CTCATTGTCGTGCTGACACG+AGG | + | tig0015628:62829-62848 | Msa1356450:CDS | 55.0% |
| ! | ATTGTCGTGCTGACACGAGG+TGG | + | tig0015628:62832-62851 | Msa1356450:CDS | 55.0% |
| ! | TTGTCGTGCTGACACGAGGT+GGG | + | tig0015628:62833-62852 | Msa1356450:CDS | 55.0% |
| !! | AGCTGGCCTTAGATGCAGGA+AGG | + | tig0015628:63190-63209 | Msa1356450:three_prime_UTR | 55.0% |
| !! | GCTGGCCTTAGATGCAGGAA+GGG | + | tig0015628:63191-63210 | Msa1356450:three_prime_UTR | 55.0% |
| !!! | GGGCTGGCTGCTTTTGCGTT+TGG | - | tig0015628:60474-60493 | None:intergenic | 60.0% |
| CAAAAGCAGCCAGCCCCCAA+AGG | + | tig0015628:60478-60497 | Msa1356450:five_prime_UTR | 60.0% | |
| TGCCGTCATGCTCGACACCA+AGG | + | tig0015628:60908-60927 | Msa1356450:CDS | 60.0% | |
| CTGCCTGTCCACTTGAAGCC+TGG | + | tig0015628:61732-61751 | Msa1356450:CDS | 60.0% | |
| CATGTGGCCCGAGAACCTTG+CGG | - | tig0015628:62016-62035 | None:intergenic | 60.0% | |
| ATGGTGGCCCGTGGTGATCT+TGG | + | tig0015628:62421-62440 | Msa1356450:CDS | 60.0% | |
| GGCCCGTGGTGATCTTGGAA+TGG | + | tig0015628:62426-62445 | Msa1356450:CDS | 60.0% | |
| !! | TCAGTTGCTTCGGCTCGGGT+TGG | - | tig0015628:62571-62590 | None:intergenic | 60.0% |
| TGCTGGTGCCTCATCACTGC+AGG | - | tig0015628:62950-62969 | None:intergenic | 60.0% | |
| ! | GCAGTGATGAGGCACCAGCA+AGG | + | tig0015628:62950-62969 | Msa1356450:CDS | 60.0% |
| AGAGCAACAACGGCGTCACC+AGG | - | tig0015628:63105-63124 | None:intergenic | 60.0% | |
| CAGGGGCCTGAGATTCGGAC+TGG | + | tig0015628:61597-61616 | Msa1356450:intron | 65.0% | |
| GATGCGTTCATGGTGGCCCG+TGG | + | tig0015628:62412-62431 | Msa1356450:CDS | 65.0% | |
| !! | GCTTCGGCTCGGGTTGGCCG+AGG | - | tig0015628:62565-62584 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0015628 | gene | 60444 | 63463 | 60444 | ID=Msa1356450;Name=Msa1356450 |
| tig0015628 | mRNA | 60444 | 63463 | 60444 | ID=Msa1356450-mRNA-1;Parent=Msa1356450;Name=Msa1356450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=138|1|1|1|0.66|0.5|4|290|510 |
| tig0015628 | exon | 60444 | 60499 | 60444 | ID=Msa1356450-mRNA-1:exon:9870;Parent=Msa1356450-mRNA-1 |
| tig0015628 | exon | 60590 | 60929 | 60590 | ID=Msa1356450-mRNA-1:exon:9871;Parent=Msa1356450-mRNA-1 |
| tig0015628 | exon | 61600 | 62061 | 61600 | ID=Msa1356450-mRNA-1:exon:9872;Parent=Msa1356450-mRNA-1 |
| tig0015628 | exon | 62361 | 63463 | 62361 | ID=Msa1356450-mRNA-1:exon:9873;Parent=Msa1356450-mRNA-1 |
| tig0015628 | five_prime_UTR | 60444 | 60499 | 60444 | ID=Msa1356450-mRNA-1:five_prime_utr;Parent=Msa1356450-mRNA-1 |
| tig0015628 | five_prime_UTR | 60590 | 60671 | 60590 | ID=Msa1356450-mRNA-1:five_prime_utr;Parent=Msa1356450-mRNA-1 |
| tig0015628 | CDS | 60672 | 60929 | 60672 | ID=Msa1356450-mRNA-1:cds;Parent=Msa1356450-mRNA-1 |
| tig0015628 | CDS | 61600 | 62061 | 61600 | ID=Msa1356450-mRNA-1:cds;Parent=Msa1356450-mRNA-1 |
| tig0015628 | CDS | 62361 | 63173 | 62361 | ID=Msa1356450-mRNA-1:cds;Parent=Msa1356450-mRNA-1 |
| tig0015628 | three_prime_UTR | 63174 | 63463 | 63174 | ID=Msa1356450-mRNA-1:three_prime_utr;Parent=Msa1356450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
